Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0006462

Physical Location & Seq

Genomic Coordinates Forward (+)

45705769 .. 45710557

Gene Structure 4789 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG324700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGCACACATTTCTGACCCCACTGTACGTCCAAAACTCTATTCCTCACAGAAACCAACCAACAAAACTCACATTTCCCAGCACCTCTTCAGTTTCCGTTACCGGCCATTTTCCGTTTCACTTGACCGGCATGCAAGCTCTCTGCATCTCTCACCGCTTGGTTCCGCCGGCGACTCACCGGCTCTCTCCGGTTCCGGTCATCAGCATTTCCTCTAGAACCTCAAGCTCATCACTTGCATGTGTCCCAAAAATCAAGTGCTTCCCAAAAGTCAAATGCTGCTCTCTGAAGAACCAGTCTTTAGCTACTGATGCAAAGAAGTTTGAGGAAGTGTCAAAGAATGGAAATTTGGTTCCCCTTTACAAGTGCATTTCTTCGGACCAGCTCACGCCGGTTCTTGCATATCGATGCTTGGTGAAGGAAGATGATAGAGAGGCTCCGAGTTTTCTGTTTGAGTCGGTTGATCAGAGCACCCAGGGGCGATATAGTGTTCTTGGAGCTCAACCAGCAATGGAGATTGTGGCGAAAGAAAATAAGGTGACGATAATGGATCATGAAGGAGGGTGTTCAGTAGAGGAGTTTGTTGAGGATCCAATGGATATTCCGAAAAGAATCTCACAGGGTTGGAGTCCCCAACTTATTCATGAACTTCCAGATGCATTTTGTGGTGGTTGGGTAGGCTTCTTTTCATATGATACAGTTCGTTATGTGGAAAAGAGAAGACTGCCATTCTCAAAGGCACCCAAGGATGACAGAAATCTTCCAGACATGCATTTAGGACTCTATGATGATGTTATAGTGTTTGACCATGTGGAGAAGAAAATTTATGTGATTCACTGGGTGAGGTTAGACCGGTACTGCTCAGTTGAGAAAGCCTATACAGATGGAGCAAAACGGTTGGATGAATTAGTGGCTCGAGTACATAACATTGACTTACCAAGGCTGTCTTCCGGTGCTGTGAGCCTGCATACTCACCATTTTGGTCCTCCTTTAAAGAATTCAAACATGACCAGTGAGGCATACAAGGACATAGTTAAGAAGGCAAAGGAGCATATACTCTCAGGGGATATTTTCCAAATCGTATTAAGTCAGCGATTTGAACGTCGAACATTTGCTGACCCATTTGAAGTCTATAGAGCCCTGAGGACTGTAAATCCGAGTCCATATTTGACTTACTTGCAGGCTAGAGGGTGTATACTGGTTGCTTCAAGTCCAGAAATTCTTATGAGTGCAAAGAAGAAAAGGATTGTGAATCGGCCATTAGCTGGAACTTCTAGAAGAGGGAAGACAATTGAAGAGGATAAAATGTTAGAAGTGCAGCTACTTCATGATGAAAAGCAATGTGCAGAACACATCATGCTGGTTGATTTGGGTCGGAATGATGTTGGCAAGGTCTCCAAATTTGGTTCTGTAAAGGTGGAAAGACTAATGAACGTTGAACGATATTCCCATGTCATGCACATAAGCTCTACGGTCACCGGCGAGCTGCAAGATGGTCTCACTTGCTGGGACGCTCTGCGAGCTGCATTGCCTGTTGGAACTGTCAGTGGTGCACCAAAGGTGAAGGCCATGGAGTTAATCGATCAGTTGGAGGTAAACAGGCGTGGCCCATACAGCGGCGGATTTGGAGCAGTATCCTTTTCCGGTGATATGGACATTGCACTAGCTCTGAGGACCATGGTGTTTCCAACAGCAGCCCGTTTTGACACAATGTACTCTTACAAAAATGGCAACACCCACCGGGAGTGGGTTGCATATCTTCAAGCTGGTGCTGGTATAGTTGCTGACAGTGATCCTGATGATGAAAACCAAGAGTGCCAGAACAAAGCTGCAGGGCTTGCTCGTGCCATCGACTTGGCTGAGGCCGCATTTGTTCATGAATGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000162 GO:0003674 GO:0003824 GO:0004049 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005950 GO:0006082 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009889 GO:0009987 GO:0010600 GO:0010817 GO:0016053 GO:0016829 GO:0016830 GO:0016833 GO:0018130 GO:0019222 GO:0019438 GO:0019752 GO:0031323 GO:0031326 GO:0032350 GO:0032991 GO:0034641 GO:0042401 GO:0042430 GO:0042435 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046219 GO:0046394 GO:0046483 GO:0046885 GO:0050789 GO:0050794 GO:0065007 GO:0065008 GO:0071704 GO:0090354 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00400 ko00405 ko01100 ko01110 ko01130 ko01230 ko02024 ko02025 map00400 map00405 map01100 map01110 map01130 map01230 map02024 map02025

Pfam Domains

Protein Families

Anth_synt_I_N Chorismate_bind

Protein Analysis

627

Amino Acids

70.01

Weight (kDa)

7.86

Isoelectric Point (pI)

45.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Anth_synt_I_N	PF04715	126 - 276	1.3e-29	Anthranilate synthase component I, N terminal region
Chorismate_bind	PF00425	337 - 608	1.5e-79	chorismate binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006462)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55870 AT3G55870 AT3G55870 AT5G05730 AT5G05730
fragaria_vesca	FvH4_3g39390 FvH4_7g24230 FvH4_7g24230
malus_domestica	MD01G1149800.v1.1 MD07G1216200.v1.1
prunus_persica	Prupe.2G248100_v2.0.a1
pyrus_communis	pycom07g19850 pycom07g19860
rosa_chinensis	RchiOBHm_Chr1g0369821
rosa_laevigata	RLG00000027103
rosa_multiflora	Rmu_sc0007743.1_g000006 Rmu_sc0008140.1_g000006 Rmu_sc0039066.1_g000001
rosa_roxburghii	Rroxscaffold_4G00287360
rosa_rugosa	Rorug01G0352500
rosa_samantha	Rh1AG361000 Rh1BG324700 Rh1CG337900 Rh1DG355100
rosa_wichuraiana	Rw0G015500 Rw1G031780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	736
AccB7I	CCANNNNNTGG	1 cut(s)	1262
AccI	GTMKAC	1 cut(s)	1192
AciI	CCGC	5 cut(s)	154, 164, 1614, 1617, 1863
AclI	AACGTT	1 cut(s)	1431
AclWI	GGATC	4 cut(s)	555, 581, 594, 1784
AcoI	YGGCCR	2 cut(s)	103, 1253
AcsI	RAATTY	5 cut(s)	343, 819, 994, 1215, 1397
AcuI	CTGAAG	2 cut(s)	72, 305
AdeI	CACNNNGTG	1 cut(s)	838
AfaI	GTAC	4 cut(s)	26, 854, 918, 1712
AfiI	CCNNNNNNNGG	3 cut(s)	1262, 1613, 1744
AgeI	ACCGGT	1 cut(s)	849
AgsI	TTSAA	7 cut(s)	999, 1097, 1124, 1206, 1292, 1436, 1760
AjnI	CCWGG	1 cut(s)	471
AjuI	GAANNNNNNNTTGG	6 cut(s)	24, 56, 329, 361, 928, 960
AloI	GAACNNNNNNTCC	2 cut(s)	333, 365
Alw21I	GWGCWC	3 cut(s)	470, 499, 1552
Alw26I	GTCTC	2 cut(s)	1396, 1499
Alw44I	GTGCAC	1 cut(s)	1548
AlwI	GGATC	4 cut(s)	555, 581, 594, 1784
Ama87I	CYCGRG	1 cut(s)	912
AoxI	GGCC	5 cut(s)	103, 1253, 1563, 1603, 1860
ApaLI	GTGCAC	1 cut(s)	1548
ApeKI	GCWGC	6 cut(s)	276, 1315, 1483, 1520, 1691, 1826
ApoI	RAATTY	5 cut(s)	343, 819, 994, 1215, 1397
AsiGI	ACCGGT	1 cut(s)	849
AspS9I	GGNCC	4 cut(s)	376, 980, 1604, 1671
AsuC2I	CCSGG	1 cut(s)	1739
AsuHPI	GGTGA	9 cut(s)	143, 167, 424, 547, 850, 962, 1465, 1570, 1655
AvaI	CYCGRG	1 cut(s)	912
AvaII	GGWCC	3 cut(s)	376, 980, 1671
AxyI	CCTNAGG	1 cut(s)	1139
BaeGI	GKGCMC	1 cut(s)	1552
BamHI	GGATCC	1 cut(s)	586
BanI	GGYRCC	1 cut(s)	736
BanII	GRGCYC	2 cut(s)	499, 1138
BarI	GAAGNNNNNNTAC	2 cut(s)	1302, 1334
BauI	CACGAG	1 cut(s)	1839
BbsI	GAAGAC	3 cut(s)	724, 936, 1289
Bbv12I	GWGCWC	3 cut(s)	470, 499, 1552
BbvCI	CCTCAGC	1 cut(s)	1857
BbvI	GCAGC	6 cut(s)	263, 1327, 1470, 1507, 1703, 1813
BccI	CCATC	3 cut(s)	875, 1484, 1853
BciT130I	CCWGG	1 cut(s)	473
BciVI	GTATCC	1 cut(s)	1642
BclI	TGATCA	1 cut(s)	460
BcnI	CCSGG	1 cut(s)	1739
BcoDI	GTCTC	2 cut(s)	1396, 1499
BfaI	CTAG	4 cut(s)	213, 1182, 1272, 1661
BfmI	CTRYAG	2 cut(s)	1129, 1827
BfuI	GTATCC	1 cut(s)	1642
BisI	GCNGC	8 cut(s)	277, 1316, 1484, 1521, 1615, 1692, 1827, 1863
BlsI	GCNGC	8 cut(s)	278, 1317, 1485, 1522, 1616, 1693, 1828, 1864
Bme1390I	CCNGG	2 cut(s)	473, 1739
Bme18I	GGWCC	3 cut(s)	376, 980, 1671
BmeT110I	CYCGRG	1 cut(s)	912
BmgT120I	GGNCC	4 cut(s)	376, 980, 1604, 1671
BmiI	GGNNCC	6 cut(s)	162, 192, 351, 435, 588, 738
BmrFI	CCNGG	2 cut(s)	473, 1739
BmrI	ACTGGG	1 cut(s)	844
BmsI	GCATC	4 cut(s)	153, 298, 395, 643
BmuI	ACTGGG	1 cut(s)	844
BpiI	GAAGAC	3 cut(s)	724, 936, 1289
Bpu10I	CCTNAGC	1 cut(s)	1857
BpuEI	CTTGAG	1 cut(s)	205
BpuMI	CCSGG	1 cut(s)	1739
Bsa29I	ATCGAT	2 cut(s)	403, 1578
BsaI	GGTCTC	2 cut(s)	1396, 1499
BsaJI	CCNNGG	6 cut(s)	471, 472, 741, 935, 1566, 1674
BsaWI	WCCGGW	5 cut(s)	187, 193, 849, 947, 1640
Bsc4I	CCNNNNNNNGG	3 cut(s)	1262, 1613, 1744
Bse118I	RCCGGY	7 cut(s)	101, 125, 166, 177, 388, 849, 1475
Bse1I	ACTGG	4 cut(s)	292, 839, 1008, 1200
Bse21I	CCTNAGG	1 cut(s)	1139
Bse3DI	GCAATG	4 cut(s)	513, 1343, 1523, 1653
BseBI	CCWGG	1 cut(s)	473
BseCI	ATCGAT	2 cut(s)	403, 1578
BseDI	CCNNGG	6 cut(s)	471, 472, 741, 935, 1566, 1674
BseGI	GGATG	2 cut(s)	751, 904
BseLI	CCNNNNNNNGG	3 cut(s)	1262, 1613, 1744
BseMI	GCAATG	4 cut(s)	513, 1343, 1523, 1653
BseMII	CTCAG	5 cut(s)	873, 1071, 1130, 1658, 1848
BseNI	ACTGG	4 cut(s)	292, 839, 1008, 1200
BseRI	GAGGAG	1 cut(s)	587
BseSI	GKGCMC	1 cut(s)	1552
BseXI	GCAGC	6 cut(s)	263, 1327, 1470, 1507, 1703, 1813
BseYI	CCCAGC	2 cut(s)	77, 1503
BsgI	GTGCAG	2 cut(s)	1334, 1362
BshFI	GGCC	5 cut(s)	105, 1255, 1565, 1605, 1862
BshNI	GGYRCC	1 cut(s)	736
BshTI	ACCGGT	1 cut(s)	849
BshVI	ATCGAT	2 cut(s)	403, 1578
BsiHKAI	GWGCWC	3 cut(s)	470, 499, 1552
BsiHKCI	CYCGRG	1 cut(s)	912
BslFI	GGGAC	3 cut(s)	227, 612, 1520
BslI	CCNNNNNNNGG	3 cut(s)	1262, 1613, 1744
BsmAI	GTCTC	2 cut(s)	1396, 1499
BsmFI	GGGAC	3 cut(s)	227, 612, 1520
BsmI	GAATGC	1 cut(s)	1883
BsnI	GGCC	5 cut(s)	105, 1255, 1565, 1605, 1862
Bso31I	GGTCTC	2 cut(s)	1396, 1499
BsoBI	CYCGRG	1 cut(s)	912
Bsp1286I	GDGCHC	4 cut(s)	470, 499, 1138, 1552
Bsp143I	GATC	5 cut(s)	460, 547, 586, 1579, 1789
Bsp19I	CCATGG	2 cut(s)	1566, 1674
BspACI	CCGC	5 cut(s)	154, 164, 1614, 1617, 1863
BspANI	GGCC	5 cut(s)	105, 1255, 1565, 1605, 1862
BspCNI	CTCAG	5 cut(s)	872, 1070, 1131, 1659, 1849
BspDI	ATCGAT	2 cut(s)	403, 1578
BspHI	TCATGA	4 cut(s)	550, 640, 1324, 1873
BspLI	GGNNCC	6 cut(s)	162, 192, 351, 435, 588, 738
BspMAI	CTGCAG	1 cut(s)	1831
BspPI	GGATC	4 cut(s)	555, 581, 594, 1784
BspT107I	GGYRCC	1 cut(s)	736
BspTNI	GGTCTC	2 cut(s)	1396, 1499
BsrDI	GCAATG	4 cut(s)	513, 1343, 1523, 1653
BsrFI	RCCGGY	7 cut(s)	101, 125, 166, 177, 388, 849, 1475
BsrI	ACTGG	4 cut(s)	292, 839, 1008, 1200
BssAI	RCCGGY	7 cut(s)	101, 125, 166, 177, 388, 849, 1475
BssECI	CCNNGG	6 cut(s)	471, 472, 741, 935, 1566, 1674
BssMI	GATC	5 cut(s)	460, 547, 586, 1579, 1789
BssNAI	GTATAC	1 cut(s)	1193
BssSI	CACGAG	1 cut(s)	1839
BssT1I	CCWWGG	4 cut(s)	741, 935, 1566, 1674
Bst1107I	GTATAC	1 cut(s)	1193
Bst2BI	CACGAG	1 cut(s)	1839
Bst2UI	CCWGG	1 cut(s)	473
Bst4CI	ACNGT	7 cut(s)	24, 697, 894, 1147, 1471, 1540, 1787
Bst6I	CTCTTC	3 cut(s)	91, 1270, 1287
BstAPI	GCANNNNNTGC	1 cut(s)	1835
BstC8I	GCNNGC	8 cut(s)	131, 135, 168, 962, 1179, 1481, 1518, 1836
BstDEI	CTNAG	5 cut(s)	859, 1057, 1139, 1667, 1857
BstDSI	CCRYGG	2 cut(s)	1566, 1674
BstEII	GGTNACC	1 cut(s)	1471
BstF5I	GGATG	2 cut(s)	751, 904
BstKTI	GATC	5 cut(s)	463, 550, 589, 1582, 1792
BstMAI	GTCTC	2 cut(s)	1396, 1499
BstMBI	GATC	5 cut(s)	460, 547, 586, 1579, 1789
BstMWI	GCNNNNNNNGC	6 cut(s)	308, 503, 1517, 1611, 1835, 1862
BstNI	CCWGG	1 cut(s)	473
BstNSI	RCATGY	3 cut(s)	133, 240, 769
BstPI	GGTNACC	1 cut(s)	1471
BstSCI	CCNGG	2 cut(s)	471, 1737
BstSFI	CTRYAG	2 cut(s)	1129, 1827
BstSLI	GKGCMC	1 cut(s)	1552
BstV1I	GCAGC	6 cut(s)	263, 1327, 1470, 1507, 1703, 1813
BstV2I	GAAGAC	3 cut(s)	724, 936, 1289
BstX2I	RGATCY	1 cut(s)	586
BstXI	CCANNNNNNTGG	1 cut(s)	1852
BstYI	RGATCY	1 cut(s)	586
BstZ17I	GTATAC	1 cut(s)	1193
Bsu15I	ATCGAT	2 cut(s)	403, 1578
Bsu36I	CCTNAGG	1 cut(s)	1139
BsuI	GTATCC	1 cut(s)	1642
BsuRI	GGCC	5 cut(s)	105, 1255, 1565, 1605, 1862
BsuTUI	ATCGAT	2 cut(s)	403, 1578
BtgI	CCRYGG	2 cut(s)	1566, 1674
BtsCI	GGATG	2 cut(s)	751, 904
BtsIMutI	CAGTG	5 cut(s)	20, 832, 1015, 1549, 1792
Cac8I	GCNNGC	8 cut(s)	131, 135, 168, 962, 1179, 1481, 1518, 1836
CciI	TCATGA	4 cut(s)	550, 640, 1324, 1873
Cfr10I	RCCGGY	7 cut(s)	101, 125, 166, 177, 388, 849, 1475
Cfr13I	GGNCC	4 cut(s)	376, 980, 1604, 1671
ClaI	ATCGAT	2 cut(s)	403, 1578
CseI	GACGC	1 cut(s)	1517
Csp6I	GTAC	4 cut(s)	25, 853, 917, 1711
CspAI	ACCGGT	1 cut(s)	849
CviQI	GTAC	4 cut(s)	25, 853, 917, 1711
DdeI	CTNAG	5 cut(s)	859, 1057, 1139, 1667, 1857
DpnI	GATC	5 cut(s)	462, 549, 588, 1581, 1791
DpnII	GATC	5 cut(s)	460, 547, 586, 1579, 1789
DraI	TTTAAA	1 cut(s)	990
DraIII	CACNNNGTG	1 cut(s)	838
EaeI	YGGCCR	2 cut(s)	103, 1253
Eam1104I	CTCTTC	3 cut(s)	91, 1270, 1287
EarI	CTCTTC	3 cut(s)	91, 1270, 1287
EciI	GGCGGA	2 cut(s)	153, 1632
Ecl136II	GAGCTC	1 cut(s)	497
Eco130I	CCWWGG	4 cut(s)	741, 935, 1566, 1674
Eco24I	GRGCYC	2 cut(s)	499, 1138
Eco31I	GGTCTC	2 cut(s)	1396, 1499
Eco47I	GGWCC	3 cut(s)	376, 980, 1671
Eco53kI	GAGCTC	1 cut(s)	497
Eco57I	CTGAAG	2 cut(s)	72, 305
Eco81I	CCTNAGG	1 cut(s)	1139
Eco88I	CYCGRG	1 cut(s)	912
Eco91I	GGTNACC	1 cut(s)	1471
EcoICRI	GAGCTC	1 cut(s)	497
EcoO65I	GGTNACC	1 cut(s)	1471
EcoRI	GAATTC	1 cut(s)	994
EcoRII	CCWGG	1 cut(s)	471
EcoT14I	CCWWGG	4 cut(s)	741, 935, 1566, 1674
EcoT22I	ATGCAT	2 cut(s)	658, 771
EcoT38I	GRGCYC	2 cut(s)	499, 1138
ErhI	CCWWGG	4 cut(s)	741, 935, 1566, 1674
FalI	AAGNNNNNCTT	2 cut(s)	928, 960
FaqI	GGGAC	3 cut(s)	227, 612, 1520
FauNDI	CATATG	1 cut(s)	688
FbaI	TGATCA	1 cut(s)	460
FblI	GTMKAC	1 cut(s)	1192
Fnu4HI	GCNGC	8 cut(s)	277, 1316, 1484, 1521, 1615, 1692, 1827, 1863
FokI	GGATG	2 cut(s)	758, 911
FriOI	GRGCYC	2 cut(s)	499, 1138
Fsp4HI	GCNGC	8 cut(s)	277, 1316, 1484, 1521, 1615, 1692, 1827, 1863
FspBI	CTAG	4 cut(s)	213, 1182, 1272, 1661
GluI	GCNGC	8 cut(s)	277, 1316, 1484, 1521, 1615, 1692, 1827, 1863
GsaI	CCCAGC	2 cut(s)	81, 1507
HaeIII	GGCC	5 cut(s)	105, 1255, 1565, 1605, 1862
HgaI	GACGC	1 cut(s)	1517
HinfI	GANTC	8 cut(s)	172, 452, 609, 625, 777, 829, 1156, 1249
HphI	GGTGA	9 cut(s)	143, 167, 424, 547, 850, 962, 1465, 1570, 1655
Hpy166II	GTNNAC	3 cut(s)	1193, 1550, 1594
Hpy188I	TCNGA	9 cut(s)	15, 285, 376, 438, 465, 603, 1155, 1374, 1668
Hpy8I	GTNNAC	3 cut(s)	1193, 1550, 1594
Hpy99I	CGWCG	1 cut(s)	1104
HpyAV	CCTTC	4 cut(s)	409, 548, 1030, 1555
HpyCH4III	ACNGT	7 cut(s)	24, 697, 894, 1147, 1471, 1540, 1787
HpyCH4IV	ACGT	3 cut(s)	27, 1099, 1431
HpyF10VI	GCNNNNNNNGC	6 cut(s)	308, 503, 1517, 1611, 1835, 1862
HpyF3I	CTNAG	5 cut(s)	859, 1057, 1139, 1667, 1857
HpySE526I	ACGT	3 cut(s)	27, 1099, 1431
KroI	GCCGGC	1 cut(s)	166
KroNI	GCCGGC	1 cut(s)	168
Ksp22I	TGATCA	1 cut(s)	460
Kzo9I	GATC	5 cut(s)	460, 547, 586, 1579, 1789
LmnI	GCTCC	5 cut(s)	439, 494, 884, 1045, 1625
Lsp1109I	GCAGC	6 cut(s)	263, 1327, 1470, 1507, 1703, 1813
LweI	GCATC	4 cut(s)	153, 298, 395, 643
MaeI	CTAG	4 cut(s)	213, 1182, 1272, 1661
MaeII	ACGT	3 cut(s)	27, 1099, 1431
MaeIII	GTNAC	3 cut(s)	97, 535, 1471
MalI	GATC	5 cut(s)	462, 549, 588, 1581, 1791
MboI	GATC	5 cut(s)	460, 547, 586, 1579, 1789
MfeI	CAATTG	1 cut(s)	1287
MflI	RGATCY	1 cut(s)	586
MhlI	GDGCHC	4 cut(s)	470, 499, 1138, 1552
MluCI	AATT	7 cut(s)	343, 819, 902, 994, 1215, 1287, 1397
MlyI	GAGTC	5 cut(s)	166, 461, 634, 771, 1165
MmeI	TCCRAC	6 cut(s)	602, 876, 1352, 1513, 1566, 1709
Mph1103I	ATGCAT	2 cut(s)	658, 771
MreI	CGCCGGCG	1 cut(s)	166
MroNI	GCCGGC	1 cut(s)	166
MseI	TTAA	4 cut(s)	989, 1032, 1082, 1574
MslI	CAYNNNNRTG	2 cut(s)	235, 403
MspA1I	CMGCKG	1 cut(s)	1614
MspR9I	CCNGG	2 cut(s)	473, 1739
MunI	CAATTG	1 cut(s)	1287
Mva1269I	GAATGC	1 cut(s)	1883
MvaI	CCWGG	1 cut(s)	473
MwoI	GCNNNNNNNGC	6 cut(s)	308, 503, 1517, 1611, 1835, 1862
NaeI	GCCGGC	1 cut(s)	168
NciI	CCSGG	1 cut(s)	1739
NcoI	CCATGG	2 cut(s)	1566, 1674
NdeI	CATATG	1 cut(s)	688
NdeII	GATC	5 cut(s)	460, 547, 586, 1579, 1789
NgoMIV	GCCGGC	1 cut(s)	166
NlaIV	GGNNCC	6 cut(s)	162, 192, 351, 435, 588, 738
NmuCI	GTSAC	2 cut(s)	535, 1471
NsiI	ATGCAT	2 cut(s)	658, 771
NspI	RCATGY	3 cut(s)	133, 240, 769
PaeI	GCATGC	1 cut(s)	133
PaeR7I	CTCGAG	1 cut(s)	912
PagI	TCATGA	4 cut(s)	550, 640, 1324, 1873
PasI	CCCWGGG	1 cut(s)	472
PctI	GAATGC	1 cut(s)	1883
PdiI	GCCGGC	1 cut(s)	168
PfeI	GAWTC	3 cut(s)	609, 829, 1249
PflMI	CCANNNNNTGG	1 cut(s)	1262
PinAI	ACCGGT	1 cut(s)	849
PkrI	GCNGC	8 cut(s)	278, 1317, 1485, 1522, 1616, 1693, 1828, 1864
PleI	GAGTC	5 cut(s)	166, 460, 633, 771, 1164
PpsI	GAGTC	5 cut(s)	166, 460, 633, 771, 1164
Psp124BI	GAGCTC	1 cut(s)	499
Psp1406I	AACGTT	1 cut(s)	1431
Psp6I	CCWGG	1 cut(s)	471
PspEI	GGTNACC	1 cut(s)	1471
PspFI	CCCAGC	2 cut(s)	77, 1503
PspGI	CCWGG	1 cut(s)	471
PspN4I	GGNNCC	6 cut(s)	162, 192, 351, 435, 588, 738
PspPI	GGNCC	4 cut(s)	376, 980, 1604, 1671
PspXI	VCTCGAGB	1 cut(s)	912
PstI	CTGCAG	1 cut(s)	1831
PsuI	RGATCY	1 cut(s)	586
RsaI	GTAC	4 cut(s)	26, 854, 918, 1712
RsaNI	GTAC	4 cut(s)	25, 853, 917, 1711
RseI	CAYNNNNRTG	2 cut(s)	235, 403
SacI	GAGCTC	1 cut(s)	499
SaqAI	TTAA	4 cut(s)	989, 1032, 1082, 1574
SatI	GCNGC	8 cut(s)	277, 1316, 1484, 1521, 1615, 1692, 1827, 1863
Sau3AI	GATC	5 cut(s)	460, 547, 586, 1579, 1789
Sau96I	GGNCC	4 cut(s)	376, 980, 1604, 1671
SchI	GAGTC	5 cut(s)	166, 461, 634, 771, 1165
ScrFI	CCNGG	2 cut(s)	473, 1739
SduI	GDGCHC	4 cut(s)	470, 499, 1138, 1552
SfaNI	GCATC	4 cut(s)	153, 298, 395, 643
SfcI	CTRYAG	2 cut(s)	1129, 1827
Sfr274I	CTCGAG	1 cut(s)	912
SgrAI	CRCCGGYG	2 cut(s)	166, 1475
SinI	GGWCC	3 cut(s)	376, 980, 1671
SlaI	CTCGAG	1 cut(s)	912
SmiMI	CAYNNNNRTG	2 cut(s)	235, 403
SmlI	CTYRAG	2 cut(s)	220, 912
SmoI	CTYRAG	2 cut(s)	220, 912
SphI	GCATGC	1 cut(s)	133
Sse9I	AATT	7 cut(s)	343, 819, 902, 994, 1215, 1287, 1397
SsiI	CCGC	5 cut(s)	154, 164, 1614, 1617, 1863
SspMI	CTAG	4 cut(s)	213, 1182, 1272, 1661
SstI	GAGCTC	1 cut(s)	499
StyD4I	CCNGG	2 cut(s)	471, 1737
StyI	CCWWGG	4 cut(s)	741, 935, 1566, 1674
TaaI	ACNGT	7 cut(s)	24, 697, 894, 1147, 1471, 1540, 1787
TaiI	ACGT	3 cut(s)	30, 1102, 1434
TaqI	TCGA	5 cut(s)	403, 913, 1102, 1578, 1848
TasI	AATT	7 cut(s)	343, 819, 902, 994, 1215, 1287, 1397
TatI	WGTACW	2 cut(s)	916, 1710
TauI	GCSGC	2 cut(s)	1617, 1865
TfiI	GAWTC	3 cut(s)	609, 829, 1249
Tru1I	TTAA	4 cut(s)	989, 1032, 1082, 1574
Tru9I	TTAA	4 cut(s)	989, 1032, 1082, 1574
TscAI	CASTG	5 cut(s)	27, 839, 1015, 1549, 1792
TseFI	GTSAC	2 cut(s)	535, 1471
TseI	GCWGC	6 cut(s)	276, 1315, 1483, 1520, 1691, 1826
Tsp45I	GTSAC	2 cut(s)	535, 1471
TspGWI	ACGGA	2 cut(s)	85, 102
TspRI	CASTG	5 cut(s)	27, 839, 1015, 1549, 1792
Van91I	CCANNNNNTGG	1 cut(s)	1262
VneI	GTGCAC	1 cut(s)	1548
VpaK11BI	GGWCC	3 cut(s)	376, 980, 1671
XapI	RAATTY	5 cut(s)	343, 819, 994, 1215, 1397
XbaI	TCTAGA	2 cut(s)	212, 1271
XceI	RCATGY	3 cut(s)	133, 240, 769
XhoI	CTCGAG	1 cut(s)	912
XmiI	GTMKAC	1 cut(s)	1192
XspI	CTAG	4 cut(s)	213, 1182, 1272, 1661
Zsp2I	ATGCAT	2 cut(s)	658, 771

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.