Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0006462

Physical Location & Seq

Genomic Coordinates Forward (+)

59968888 .. 59973402

Gene Structure 4515 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G031780.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGCAAGCTCTCTGCATCTCTCACCGCTTGGTTCCGCCGGCGACTCACCGGCTTTCTCCGGTTCCCGTCATCAGCATTTCCTCTAGAACCTCAAGCTCATTACTTGCATGTGTTCCAAAAATCAAATGCTTCCCAAAAGTCAAATGCTGCTCTCTGAAGAACCAGTCTTTAGCAACTGACGCAAAGAAGTTTGAGGAAGTGTCAAAAAATGGAAATTTGGTTCCCCTTTACAAGTGCATTTTTTCGGACCAGCTCACGCCGGTTCTTGCATATCGATGCTTGGTGAAGGAAGATGACAGAGAGGCTCCGAGTTTTCTGTTTGAGTCGGTTGATCAGAGCACCCAGGGGCGATATAGTGTTCTTGGAGCTCAACCAGCAATGGAGATTGTGGCGAAAGAAAATAAGGTGACTATAATGGATCATGAAGGAAGGTGTTCAGTAGAGGAGTTTGTTGAGGATCCAATGGATATTCCGAAAAGAATCTCACAGGGTTGGCGTCCCCAACTTATTCATGAACTTCCAGATGCATTTTGTGGTGGTTGGGTAGGCTTCTTTTCATATGATACAGTTCGTTATGTGGAAAAGAGAAGACTGCCATTCTCAAAGGCACCCAAGGATGACAGAAATCTTCCAGACATGCATTTAGGACTCTATGATGATGTTATAGTGTTTGACCATGTGGAGAAGAAAATTTTTGTGATTCACTGGGTGAGGTTAGACCGGTACTCCTCAGTTGAGAAAGCCTATACAGATGGAGCAAAACGGTTGGATGAATTAGTGGCTCGAGTACATAACATTGACTTACCAAGGCTGTCTTCCGGTGCTGTGAGCCTGCATACTCACCATTTTGGTCCTCCCTTAAAGAATTCAAACATGACCAGTGAGGCATACAAGGACATAGTTAAGAAGGCAAAGGAGCATATACTCTCAGGGGATATTTTCCAAATCGTATTAATCTATAGAGCCCTGAGGACTGTAAATCCGAGTCCATATATGACTTACTTGCAGGCTAGAGGGTGTATACTGGTTGCTTCAAGTCCAGAAATTCTTATGAGTGCAAAGAAGAAAAAAATTGTGAATCGGCCATTAGCTGGAACTTCTAGAAGAGGGAAGACAATTGAAGAGGATAAAATGTTAGAAGTGCAGCTACTTCATGATGAAAAGCAATGTGCAGAACACATCATGCTGGTTGATTTGGGTCGGAATGATGTTGGAAAGGTCTCCAAATTTGGTTCTGTAAACGTGGAAAGACTAATGAACGTTGAACGATATTCCCATGTCATGCACATAAGCTCTACGGTCACCGGCGAGCTGCAAGACGGTCTCACTTGCTGGGACGCTCTGCGAGCTGCATTGCCTGTTGGAACTGTCAGTGGTGCACCAAAGGTGAAGGCCATGGAGTTAATCGATCAGTTGGAGGTAAACAGGCGTGGCCCATACAGCGGCGGATTTGGAGCAGTATCGTTTTCCGGTGATATGGACATTGCACTAGCTCTGAGGACCATGGTGTTTCCAACAGCAGCCCGTTTTGACACAATGTACTCTTACAAAAATGGCAACACCCGTCGGGAGTGGGTTGCATATCTTCAAGCTGGTGCTGGTATAGTTGCTGACAGTGATCCTGATGATGAAAACCAAGAGTGCCAGAACAAAGCTGCAGGTCTTGCTCGTGCCATCGACTTGGCTGAGGCCGCATTTGTTCATGAATGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000162 GO:0003674 GO:0003824 GO:0004049 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005950 GO:0006082 GO:0006520 GO:0006568 GO:0006576 GO:0006586 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009308 GO:0009309 GO:0009889 GO:0009987 GO:0010600 GO:0010817 GO:0016053 GO:0016829 GO:0016830 GO:0016833 GO:0018130 GO:0019222 GO:0019438 GO:0019752 GO:0031323 GO:0031326 GO:0032350 GO:0032991 GO:0034641 GO:0042401 GO:0042430 GO:0042435 GO:0043436 GO:0044106 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046219 GO:0046394 GO:0046483 GO:0046885 GO:0050789 GO:0050794 GO:0065007 GO:0065008 GO:0071704 GO:0090354 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902494

KEGG Pathways

Metabolic & Signaling

ko00400 ko00405 ko01100 ko01110 ko01130 ko01230 ko02024 ko02025 map00400 map00405 map01100 map01110 map01130 map01230 map02024 map02025

Pfam Domains

Protein Families

Anth_synt_I_N Chorismate_bind

Protein Analysis

570

Amino Acids

63.66

Weight (kDa)

7.86

Isoelectric Point (pI)

45.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Anth_synt_I_N	PF04715	83 - 233	8.6e-30	Anthranilate synthase component I, N terminal region
Chorismate_bind	PF00425	295 - 551	2.9e-69	chorismate binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006462)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55870 AT3G55870 AT3G55870 AT5G05730 AT5G05730
fragaria_vesca	FvH4_3g39390 FvH4_7g24230 FvH4_7g24230
malus_domestica	MD01G1149800.v1.1 MD07G1216200.v1.1
prunus_persica	Prupe.2G248100_v2.0.a1
pyrus_communis	pycom07g19850 pycom07g19860
rosa_chinensis	RchiOBHm_Chr1g0369821
rosa_laevigata	RLG00000027103
rosa_multiflora	Rmu_sc0007743.1_g000006 Rmu_sc0008140.1_g000006 Rmu_sc0039066.1_g000001
rosa_roxburghii	Rroxscaffold_4G00287360
rosa_rugosa	Rorug01G0352500
rosa_samantha	Rh1AG361000 Rh1BG324700 Rh1CG337900 Rh1DG355100
rosa_wichuraiana	Rw0G015500 Rw1G031780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1649
AccB1I	GGYRCC	1 cut(s)	607
AccB7I	CCANNNNNTGG	1 cut(s)	1091
AccI	GTMKAC	1 cut(s)	1021
AciI	CCGC	5 cut(s)	25, 35, 1443, 1446, 1692
AclI	AACGTT	1 cut(s)	1260
AclWI	GGATC	4 cut(s)	426, 452, 465, 1613
AcoI	YGGCCR	1 cut(s)	1082
AcsI	RAATTY	5 cut(s)	214, 690, 865, 1044, 1226
AcuI	CTGAAG	1 cut(s)	176
AcyI	GRCGYC	1 cut(s)	496
AdeI	CACNNNGTG	1 cut(s)	709
AfaI	GTAC	3 cut(s)	725, 789, 1541
AfiI	CCNNNNNNNGG	2 cut(s)	1091, 1442
AgeI	ACCGGT	1 cut(s)	720
AgsI	TTSAA	5 cut(s)	870, 1035, 1121, 1265, 1589
AjnI	CCWGG	1 cut(s)	342
AjuI	GAANNNNNNNTTGG	2 cut(s)	799, 831
AloI	GAACNNNNNNTCC	2 cut(s)	204, 236
Alw21I	GWGCWC	3 cut(s)	341, 370, 1381
Alw26I	GTCTC	2 cut(s)	1225, 1328
Alw44I	GTGCAC	1 cut(s)	1377
AlwI	GGATC	4 cut(s)	426, 452, 465, 1613
Ama87I	CYCGRG	1 cut(s)	783
AoxI	GGCC	4 cut(s)	1082, 1392, 1432, 1689
ApaLI	GTGCAC	1 cut(s)	1377
ApeKI	GCWGC	6 cut(s)	147, 1144, 1312, 1349, 1520, 1655
ApoI	RAATTY	5 cut(s)	214, 690, 865, 1044, 1226
AseI	ATTAAT	1 cut(s)	953
AsiGI	ACCGGT	1 cut(s)	720
Asp700I	GAANNNNTTC	1 cut(s)	433
AspS9I	GGNCC	4 cut(s)	247, 851, 1433, 1500
AsuHPI	GGTGA	9 cut(s)	14, 38, 295, 418, 721, 833, 1294, 1399, 1484
AvaI	CYCGRG	1 cut(s)	783
AvaII	GGWCC	3 cut(s)	247, 851, 1500
AxyI	CCTNAGG	1 cut(s)	968
BaeGI	GKGCMC	1 cut(s)	1381
BamHI	GGATCC	1 cut(s)	457
BanI	GGYRCC	1 cut(s)	607
BanII	GRGCYC	2 cut(s)	370, 967
BarI	GAAGNNNNNNTAC	2 cut(s)	1131, 1163
BauI	CACGAG	1 cut(s)	1668
BbsI	GAAGAC	3 cut(s)	595, 807, 1118
Bbv12I	GWGCWC	3 cut(s)	341, 370, 1381
BbvCI	CCTCAGC	1 cut(s)	1686
BbvI	GCAGC	6 cut(s)	134, 1156, 1299, 1336, 1532, 1642
BccI	CCATC	2 cut(s)	746, 1682
BciT130I	CCWGG	1 cut(s)	344
BclI	TGATCA	1 cut(s)	331
BcoDI	GTCTC	2 cut(s)	1225, 1328
BfaI	CTAG	4 cut(s)	84, 1011, 1101, 1490
BfmI	CTRYAG	2 cut(s)	958, 1656
BfuAI	ACCTGC	1 cut(s)	1649
BisI	GCNGC	8 cut(s)	148, 1145, 1313, 1350, 1444, 1521, 1656, 1692
BlsI	GCNGC	8 cut(s)	149, 1146, 1314, 1351, 1445, 1522, 1657, 1693
Bme1390I	CCNGG	1 cut(s)	344
Bme18I	GGWCC	3 cut(s)	247, 851, 1500
BmeT110I	CYCGRG	1 cut(s)	783
BmgT120I	GGNCC	4 cut(s)	247, 851, 1433, 1500
BmiI	GGNNCC	6 cut(s)	33, 63, 222, 306, 459, 609
BmrFI	CCNGG	1 cut(s)	344
BmrI	ACTGGG	1 cut(s)	715
BmsI	GCATC	3 cut(s)	24, 266, 514
BmuI	ACTGGG	1 cut(s)	715
BpiI	GAAGAC	3 cut(s)	595, 807, 1118
Bpu10I	CCTNAGC	1 cut(s)	1686
BpuEI	CTTGAG	1 cut(s)	76
Bsa29I	ATCGAT	2 cut(s)	274, 1407
BsaHI	GRCGYC	1 cut(s)	496
BsaI	GGTCTC	2 cut(s)	1225, 1328
BsaJI	CCNNGG	6 cut(s)	342, 343, 612, 806, 1395, 1503
BsaWI	WCCGGW	4 cut(s)	58, 720, 818, 1469
BsaXI	ACNNNNNCTCC	2 cut(s)	710, 740
Bsc4I	CCNNNNNNNGG	2 cut(s)	1091, 1442
Bse118I	RCCGGY	5 cut(s)	37, 48, 259, 720, 1304
Bse1I	ACTGG	4 cut(s)	163, 710, 879, 1029
Bse21I	CCTNAGG	1 cut(s)	968
Bse3DI	GCAATG	4 cut(s)	384, 1172, 1352, 1482
BseBI	CCWGG	1 cut(s)	344
BseCI	ATCGAT	2 cut(s)	274, 1407
BseDI	CCNNGG	6 cut(s)	342, 343, 612, 806, 1395, 1503
BseGI	GGATG	2 cut(s)	622, 775
BseLI	CCNNNNNNNGG	2 cut(s)	1091, 1442
BseMI	GCAATG	4 cut(s)	384, 1172, 1352, 1482
BseMII	CTCAG	5 cut(s)	744, 942, 959, 1487, 1677
BseNI	ACTGG	4 cut(s)	163, 710, 879, 1029
BseRI	GAGGAG	2 cut(s)	458, 718
BseSI	GKGCMC	1 cut(s)	1381
BseXI	GCAGC	6 cut(s)	134, 1156, 1299, 1336, 1532, 1642
BseYI	CCCAGC	1 cut(s)	1332
BsgI	GTGCAG	2 cut(s)	1163, 1191
BshFI	GGCC	4 cut(s)	1084, 1394, 1434, 1691
BshNI	GGYRCC	1 cut(s)	607
BshTI	ACCGGT	1 cut(s)	720
BshVI	ATCGAT	2 cut(s)	274, 1407
BsiHKAI	GWGCWC	3 cut(s)	341, 370, 1381
BsiHKCI	CYCGRG	1 cut(s)	783
BsiSI	CCGG	8 cut(s)	38, 49, 59, 260, 721, 819, 1305, 1470
BslFI	GGGAC	2 cut(s)	483, 1349
BslI	CCNNNNNNNGG	2 cut(s)	1091, 1442
BsmAI	GTCTC	2 cut(s)	1225, 1328
BsmFI	GGGAC	2 cut(s)	483, 1349
BsmI	GAATGC	1 cut(s)	1712
BsnI	GGCC	4 cut(s)	1084, 1394, 1434, 1691
Bso31I	GGTCTC	2 cut(s)	1225, 1328
BsoBI	CYCGRG	1 cut(s)	783
Bsp1286I	GDGCHC	4 cut(s)	341, 370, 967, 1381
Bsp143I	GATC	5 cut(s)	331, 418, 457, 1408, 1618
Bsp19I	CCATGG	2 cut(s)	1395, 1503
BspACI	CCGC	5 cut(s)	25, 35, 1443, 1446, 1692
BspANI	GGCC	4 cut(s)	1084, 1394, 1434, 1691
BspCNI	CTCAG	5 cut(s)	743, 941, 960, 1488, 1678
BspDI	ATCGAT	2 cut(s)	274, 1407
BspHI	TCATGA	4 cut(s)	421, 511, 1153, 1702
BspLI	GGNNCC	6 cut(s)	33, 63, 222, 306, 459, 609
BspMAI	CTGCAG	1 cut(s)	1660
BspMI	ACCTGC	1 cut(s)	1649
BspPI	GGATC	4 cut(s)	426, 452, 465, 1613
BspT107I	GGYRCC	1 cut(s)	607
BspTNI	GGTCTC	2 cut(s)	1225, 1328
BsrDI	GCAATG	4 cut(s)	384, 1172, 1352, 1482
BsrFI	RCCGGY	5 cut(s)	37, 48, 259, 720, 1304
BsrI	ACTGG	4 cut(s)	163, 710, 879, 1029
BssAI	RCCGGY	5 cut(s)	37, 48, 259, 720, 1304
BssECI	CCNNGG	6 cut(s)	342, 343, 612, 806, 1395, 1503
BssMI	GATC	5 cut(s)	331, 418, 457, 1408, 1618
BssNAI	GTATAC	1 cut(s)	1022
BssNI	GRCGYC	1 cut(s)	496
BssSI	CACGAG	1 cut(s)	1668
BssT1I	CCWWGG	4 cut(s)	612, 806, 1395, 1503
Bst1107I	GTATAC	1 cut(s)	1022
Bst2BI	CACGAG	1 cut(s)	1668
Bst2UI	CCWGG	1 cut(s)	344
Bst4CI	ACNGT	7 cut(s)	568, 765, 976, 1300, 1322, 1369, 1616
Bst6I	CTCTTC	2 cut(s)	1099, 1116
BstACI	GRCGYC	1 cut(s)	496
BstAPI	GCANNNNNTGC	1 cut(s)	1664
BstC8I	GCNNGC	6 cut(s)	6, 39, 833, 1008, 1310, 1347
BstDEI	CTNAG	5 cut(s)	730, 928, 968, 1496, 1686
BstDSI	CCRYGG	2 cut(s)	1395, 1503
BstEII	GGTNACC	1 cut(s)	1300
BstF5I	GGATG	2 cut(s)	622, 775
BstKTI	GATC	5 cut(s)	334, 421, 460, 1411, 1621
BstMAI	GTCTC	2 cut(s)	1225, 1328
BstMBI	GATC	5 cut(s)	331, 418, 457, 1408, 1618
BstMWI	GCNNNNNNNGC	6 cut(s)	179, 374, 1346, 1440, 1664, 1691
BstNI	CCWGG	1 cut(s)	344
BstNSI	RCATGY	2 cut(s)	111, 640
BstPI	GGTNACC	1 cut(s)	1300
BstSCI	CCNGG	1 cut(s)	342
BstSFI	CTRYAG	2 cut(s)	958, 1656
BstSLI	GKGCMC	1 cut(s)	1381
BstV1I	GCAGC	6 cut(s)	134, 1156, 1299, 1336, 1532, 1642
BstV2I	GAAGAC	3 cut(s)	595, 807, 1118
BstX2I	RGATCY	1 cut(s)	457
BstXI	CCANNNNNNTGG	1 cut(s)	1681
BstYI	RGATCY	1 cut(s)	457
BstZ17I	GTATAC	1 cut(s)	1022
Bsu15I	ATCGAT	2 cut(s)	274, 1407
Bsu36I	CCTNAGG	1 cut(s)	968
BsuRI	GGCC	4 cut(s)	1084, 1394, 1434, 1691
BsuTUI	ATCGAT	2 cut(s)	274, 1407
BtgI	CCRYGG	2 cut(s)	1395, 1503
BtsCI	GGATG	2 cut(s)	622, 775
BtsIMutI	CAGTG	4 cut(s)	703, 886, 1378, 1621
BveI	ACCTGC	1 cut(s)	1649
Cac8I	GCNNGC	6 cut(s)	6, 39, 833, 1008, 1310, 1347
CciI	TCATGA	4 cut(s)	421, 511, 1153, 1702
Cfr10I	RCCGGY	5 cut(s)	37, 48, 259, 720, 1304
Cfr13I	GGNCC	4 cut(s)	247, 851, 1433, 1500
ClaI	ATCGAT	2 cut(s)	274, 1407
CseI	GACGC	3 cut(s)	188, 485, 1346
Csp6I	GTAC	3 cut(s)	724, 788, 1540
CspAI	ACCGGT	1 cut(s)	720
CviQI	GTAC	3 cut(s)	724, 788, 1540
DdeI	CTNAG	5 cut(s)	730, 928, 968, 1496, 1686
DpnI	GATC	5 cut(s)	333, 420, 459, 1410, 1620
DpnII	GATC	5 cut(s)	331, 418, 457, 1408, 1618
DraIII	CACNNNGTG	1 cut(s)	709
EaeI	YGGCCR	1 cut(s)	1082
Eam1104I	CTCTTC	2 cut(s)	1099, 1116
EarI	CTCTTC	2 cut(s)	1099, 1116
EciI	GGCGGA	2 cut(s)	24, 1461
Ecl136II	GAGCTC	1 cut(s)	368
Eco130I	CCWWGG	4 cut(s)	612, 806, 1395, 1503
Eco24I	GRGCYC	2 cut(s)	370, 967
Eco31I	GGTCTC	2 cut(s)	1225, 1328
Eco47I	GGWCC	3 cut(s)	247, 851, 1500
Eco53kI	GAGCTC	1 cut(s)	368
Eco57I	CTGAAG	1 cut(s)	176
Eco81I	CCTNAGG	1 cut(s)	968
Eco88I	CYCGRG	1 cut(s)	783
Eco91I	GGTNACC	1 cut(s)	1300
EcoICRI	GAGCTC	1 cut(s)	368
EcoO65I	GGTNACC	1 cut(s)	1300
EcoRI	GAATTC	1 cut(s)	865
EcoRII	CCWGG	1 cut(s)	342
EcoT14I	CCWWGG	4 cut(s)	612, 806, 1395, 1503
EcoT22I	ATGCAT	2 cut(s)	529, 642
EcoT38I	GRGCYC	2 cut(s)	370, 967
ErhI	CCWWGG	4 cut(s)	612, 806, 1395, 1503
FalI	AAGNNNNNCTT	2 cut(s)	799, 831
FaqI	GGGAC	2 cut(s)	483, 1349
FauNDI	CATATG	1 cut(s)	559
FbaI	TGATCA	1 cut(s)	331
FblI	GTMKAC	1 cut(s)	1021
Fnu4HI	GCNGC	8 cut(s)	148, 1145, 1313, 1350, 1444, 1521, 1656, 1692
FokI	GGATG	2 cut(s)	629, 782
FriOI	GRGCYC	2 cut(s)	370, 967
Fsp4HI	GCNGC	8 cut(s)	148, 1145, 1313, 1350, 1444, 1521, 1656, 1692
FspBI	CTAG	4 cut(s)	84, 1011, 1101, 1490
GluI	GCNGC	8 cut(s)	148, 1145, 1313, 1350, 1444, 1521, 1656, 1692
GsaI	CCCAGC	1 cut(s)	1336
HaeIII	GGCC	4 cut(s)	1084, 1394, 1434, 1691
HapII	CCGG	8 cut(s)	38, 49, 59, 260, 721, 819, 1305, 1470
HgaI	GACGC	3 cut(s)	188, 485, 1346
Hin1I	GRCGYC	1 cut(s)	496
HinfI	GANTC	7 cut(s)	43, 323, 480, 648, 700, 985, 1078
HpaII	CCGG	8 cut(s)	38, 49, 59, 260, 721, 819, 1305, 1470
HphI	GGTGA	9 cut(s)	14, 38, 295, 418, 721, 833, 1294, 1399, 1484
Hpy166II	GTNNAC	4 cut(s)	1022, 1240, 1379, 1423
Hpy188I	TCNGA	8 cut(s)	156, 247, 309, 336, 474, 984, 1203, 1497
Hpy8I	GTNNAC	4 cut(s)	1022, 1240, 1379, 1423
Hpy99I	CGWCG	1 cut(s)	1569
HpyAV	CCTTC	5 cut(s)	280, 419, 423, 901, 1384
HpyCH4III	ACNGT	7 cut(s)	568, 765, 976, 1300, 1322, 1369, 1616
HpyCH4IV	ACGT	2 cut(s)	1242, 1260
HpyF10VI	GCNNNNNNNGC	6 cut(s)	179, 374, 1346, 1440, 1664, 1691
HpyF3I	CTNAG	5 cut(s)	730, 928, 968, 1496, 1686
HpySE526I	ACGT	2 cut(s)	1242, 1260
Hsp92I	GRCGYC	1 cut(s)	496
KroI	GCCGGC	1 cut(s)	37
KroNI	GCCGGC	1 cut(s)	39
Ksp22I	TGATCA	1 cut(s)	331
Kzo9I	GATC	5 cut(s)	331, 418, 457, 1408, 1618
LmnI	GCTCC	5 cut(s)	310, 365, 755, 916, 1454
Lsp1109I	GCAGC	6 cut(s)	134, 1156, 1299, 1336, 1532, 1642
LweI	GCATC	3 cut(s)	24, 266, 514
MaeI	CTAG	4 cut(s)	84, 1011, 1101, 1490
MaeII	ACGT	2 cut(s)	1242, 1260
MaeIII	GTNAC	2 cut(s)	406, 1300
MalI	GATC	5 cut(s)	333, 420, 459, 1410, 1620
MboI	GATC	5 cut(s)	331, 418, 457, 1408, 1618
MfeI	CAATTG	1 cut(s)	1116
MflI	RGATCY	1 cut(s)	457
MhlI	GDGCHC	4 cut(s)	341, 370, 967, 1381
MluCI	AATT	8 cut(s)	214, 690, 773, 865, 1044, 1071, 1116, 1226
MlyI	GAGTC	4 cut(s)	37, 332, 642, 994
MmeI	TCCRAC	6 cut(s)	747, 1181, 1192, 1342, 1395, 1538
Mph1103I	ATGCAT	2 cut(s)	529, 642
MreI	CGCCGGCG	1 cut(s)	37
MroNI	GCCGGC	1 cut(s)	37
MroXI	GAANNNNTTC	1 cut(s)	433
MseI	TTAA	4 cut(s)	860, 903, 953, 1403
MslI	CAYNNNNRTG	1 cut(s)	274
MspA1I	CMGCKG	1 cut(s)	1443
MspI	CCGG	8 cut(s)	38, 49, 59, 260, 721, 819, 1305, 1470
MspR9I	CCNGG	1 cut(s)	344
MunI	CAATTG	1 cut(s)	1116
Mva1269I	GAATGC	1 cut(s)	1712
MvaI	CCWGG	1 cut(s)	344
MwoI	GCNNNNNNNGC	6 cut(s)	179, 374, 1346, 1440, 1664, 1691
NaeI	GCCGGC	1 cut(s)	39
NcoI	CCATGG	2 cut(s)	1395, 1503
NdeI	CATATG	1 cut(s)	559
NdeII	GATC	5 cut(s)	331, 418, 457, 1408, 1618
NgoMIV	GCCGGC	1 cut(s)	37
NlaIV	GGNNCC	6 cut(s)	33, 63, 222, 306, 459, 609
NmuCI	GTSAC	2 cut(s)	406, 1300
NsiI	ATGCAT	2 cut(s)	529, 642
NspI	RCATGY	2 cut(s)	111, 640
PaeR7I	CTCGAG	1 cut(s)	783
PagI	TCATGA	4 cut(s)	421, 511, 1153, 1702
PasI	CCCWGGG	1 cut(s)	343
PctI	GAATGC	1 cut(s)	1712
PdiI	GCCGGC	1 cut(s)	39
PdmI	GAANNNNTTC	1 cut(s)	433
PfeI	GAWTC	3 cut(s)	480, 700, 1078
PflMI	CCANNNNNTGG	1 cut(s)	1091
PinAI	ACCGGT	1 cut(s)	720
PkrI	GCNGC	8 cut(s)	149, 1146, 1314, 1351, 1445, 1522, 1657, 1693
PleI	GAGTC	4 cut(s)	37, 331, 642, 993
PpsI	GAGTC	4 cut(s)	37, 331, 642, 993
PshBI	ATTAAT	1 cut(s)	953
Psp124BI	GAGCTC	1 cut(s)	370
Psp1406I	AACGTT	1 cut(s)	1260
Psp6I	CCWGG	1 cut(s)	342
PspEI	GGTNACC	1 cut(s)	1300
PspFI	CCCAGC	1 cut(s)	1332
PspGI	CCWGG	1 cut(s)	342
PspN4I	GGNNCC	6 cut(s)	33, 63, 222, 306, 459, 609
PspPI	GGNCC	4 cut(s)	247, 851, 1433, 1500
PspXI	VCTCGAGB	1 cut(s)	783
PstI	CTGCAG	1 cut(s)	1660
PsuI	RGATCY	1 cut(s)	457
RsaI	GTAC	3 cut(s)	725, 789, 1541
RsaNI	GTAC	3 cut(s)	724, 788, 1540
RseI	CAYNNNNRTG	1 cut(s)	274
SacI	GAGCTC	1 cut(s)	370
SaqAI	TTAA	4 cut(s)	860, 903, 953, 1403
SatI	GCNGC	8 cut(s)	148, 1145, 1313, 1350, 1444, 1521, 1656, 1692
Sau3AI	GATC	5 cut(s)	331, 418, 457, 1408, 1618
Sau96I	GGNCC	4 cut(s)	247, 851, 1433, 1500
SchI	GAGTC	4 cut(s)	37, 332, 642, 994
ScrFI	CCNGG	1 cut(s)	344
SduI	GDGCHC	4 cut(s)	341, 370, 967, 1381
SfaNI	GCATC	3 cut(s)	24, 266, 514
SfcI	CTRYAG	2 cut(s)	958, 1656
Sfr274I	CTCGAG	1 cut(s)	783
SgrAI	CRCCGGYG	2 cut(s)	37, 1304
SinI	GGWCC	3 cut(s)	247, 851, 1500
SlaI	CTCGAG	1 cut(s)	783
SmiMI	CAYNNNNRTG	1 cut(s)	274
SmlI	CTYRAG	2 cut(s)	91, 783
SmoI	CTYRAG	2 cut(s)	91, 783
Sse9I	AATT	8 cut(s)	214, 690, 773, 865, 1044, 1071, 1116, 1226
SsiI	CCGC	5 cut(s)	25, 35, 1443, 1446, 1692
SspMI	CTAG	4 cut(s)	84, 1011, 1101, 1490
SstI	GAGCTC	1 cut(s)	370
StyD4I	CCNGG	1 cut(s)	342
StyI	CCWWGG	4 cut(s)	612, 806, 1395, 1503
TaaI	ACNGT	7 cut(s)	568, 765, 976, 1300, 1322, 1369, 1616
TaiI	ACGT	2 cut(s)	1245, 1263
TaqI	TCGA	4 cut(s)	274, 784, 1407, 1677
TasI	AATT	8 cut(s)	214, 690, 773, 865, 1044, 1071, 1116, 1226
TatI	WGTACW	2 cut(s)	787, 1539
TauI	GCSGC	2 cut(s)	1446, 1694
TfiI	GAWTC	3 cut(s)	480, 700, 1078
Tru1I	TTAA	4 cut(s)	860, 903, 953, 1403
Tru9I	TTAA	4 cut(s)	860, 903, 953, 1403
TscAI	CASTG	4 cut(s)	710, 886, 1378, 1621
TseFI	GTSAC	2 cut(s)	406, 1300
TseI	GCWGC	6 cut(s)	147, 1144, 1312, 1349, 1520, 1655
Tsp45I	GTSAC	2 cut(s)	406, 1300
TspRI	CASTG	4 cut(s)	710, 886, 1378, 1621
Van91I	CCANNNNNTGG	1 cut(s)	1091
VneI	GTGCAC	1 cut(s)	1377
VpaK11BI	GGWCC	3 cut(s)	247, 851, 1500
VspI	ATTAAT	1 cut(s)	953
XapI	RAATTY	5 cut(s)	214, 690, 865, 1044, 1226
XbaI	TCTAGA	2 cut(s)	83, 1100
XceI	RCATGY	2 cut(s)	111, 640
XhoI	CTCGAG	1 cut(s)	783
XmiI	GTMKAC	1 cut(s)	1021
XmnI	GAANNNNTTC	1 cut(s)	433
XspI	CTAG	4 cut(s)	84, 1011, 1101, 1490
Zsp2I	ATGCAT	2 cut(s)	529, 642

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.