AT3G59110

receptor-like protein kinase At2g42960

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
21854640 .. 21858204
3565 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G59110.1

Sequence Viewer

Length: 1539 bp
ATGTCATCTGAGAGTTCTCTGAGTGCTGACATGTCGAAGAAGGTCTCATTTTTAGGTTTGAAGGGTATGAAACTGTGGGTACTGATTTGTTTAGTAGTTGGCACATTTGTAGTTTTGGTTTTCTGTATATTATCTCTATGGATTGCATTCCGCCGGAAATCCCGGAGATCATCTCACAAGCTGTTACCCTTCAGTCAAATACCACGCGTGGCGAAAGATATCAGGGTTGATGATAGAGTTGGGTTTCAAAATCATAATGAAAATTTATCTATCACAAATGCTGATAAATCTAGTGACAGAAACTCTGGGAAGATGATGTCTTACTTGGGAAGAACGAAGTCTAGTGATAATGATAGTATAAGTCAATGTAGCTCTGTGCATCATCATGAGAGAGCTTGTAGTTCTCACTCTGGTGAAGATGGAAGCTTTGGAGCTGCTTGGAGACAAAATTCCCTATCACAGGGCGGGCTAGTAACAGCATCTCCTTTGGTTGGTTTGCCAGAAATATCTCATCTTGGTTGGGGACACTGGTTTACTCTTAGGGATCTTCAGCTAGCCACCAACCGTTTTGCTGCTGAAAATGTAATCGGTGAGGGTGGTTATGGAGTAGTTTATAAGGGTAGACTCATCAACGGTAATGATGTTGCTGTAAAGAAGCTTCTTAACAATCTGGGACAGGCTGAGAAGGAATTCCGGGTTGAAGTTGAGGCTATTGGTCATGTACGGCACAAGAATCTTGTAAGGCTTCTAGGATATTGCATAGAGGGTGTTAATAGGATGCTTGTTTATGAGTATGTGAATAGTGGTAACTTAGAACAATGGCTACATGGAGCCATGGGAAAACAAAGCACTCTCACTTGGGAGGCTCGCATGAAAATCCTTGTTGGTACTGCGCAGGCGCTTGCTTATTTACATGAAGCAATAGAACCAAAAGTAGTCCACAGAGACATAAAAGCAAGCAATATCCTGATTGACGATGACTTCAATGCAAAGCTTTCTGATTTTGGGTTGGCCAAGCTCTTAGACTCGGGTGAGAGTCACATCACGACCAGAGTCATGGGAACCTTTGGATATGTCGCACCCGAATATGCTAATACAGGTCTATTGAATGAGAAGAGTGACATCTATAGCTTTGGTGTCCTGCTGCTAGAGACTATAACTGGAAGAGATCCAGTTGACTATGAACGTCCAGCTAATGAGGTGAATCTGGTCGAATGGCTAAAGATGATGGTTGGAACAAGAAGAGCTGAAGAAGTTGTTGACTCAAGGATTGAGCCTCCACCCGCTACACGTGCTCTGAAACGTGCACTTCTTGTTGCCCTGAGATGTGTGGATCCTGAAGCACAGAAACGGCCTAAAATGAGCCAGGTTGTGCGGATGCTTGAATCCGATGAACACCCTTTTCGTGAGGAGCGGAGGAACAGAAAGAGTAGAACAGCGAGTATGGAGATTGTTGAAACCACTGAGGAATCAGCTGACACAAGCAAAGGGCCTGGTCACTCAGAGAACACTACAAAACCTGAGAAGACTCATGTATAG

Protein Analysis

512

Amino Acids

57.12

Weight (kDa)

8.56

Isoelectric Point (pI)

43.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 192 - 459 8.2e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 193 - 461 2.6e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 615
Acc16I TGCGCA 1 cut(s) 894
AccBSI CCGCTC 1 cut(s) 1414
AccI GTMKAC 1 cut(s) 622
AccII CGCG 1 cut(s) 207
AciI CCGC 5 cut(s) 151, 465, 1284, 1375, 1414
AclWI GGATC 4 cut(s) 552, 1163, 1328, 1341
AcoI YGGCCR 1 cut(s) 1011
AcsI RAATTY 3 cut(s) 262, 448, 689
AcuI CTGAAG 4 cut(s) 175, 533, 1269, 1359
AcvI CACGTG 1 cut(s) 1292
AfaI GTAC 3 cut(s) 81, 723, 889
AfiI CCNNNNNNNGG 2 cut(s) 460, 491
AflIII ACRYGT 3 cut(s) 30, 205, 1289
AgsI TTSAA 7 cut(s) 61, 248, 701, 985, 1108, 1385, 1457
AjnI CCWGG 2 cut(s) 1365, 1492
AleI CACNNNNGTG 1 cut(s) 411
Alw21I GWGCWC 2 cut(s) 1297, 1309
Alw26I GTCTC 4 cut(s) 49, 436, 939, 1145
Alw44I GTGCAC 1 cut(s) 1305
AlwI GGATC 4 cut(s) 552, 1163, 1328, 1341
Ama87I CYCGRG 1 cut(s) 1027
AoxI GGCC 3 cut(s) 1011, 1352, 1490
ApaLI GTGCAC 1 cut(s) 1305
ApeKI GCWGC 3 cut(s) 434, 572, 1144
ApoI RAATTY 3 cut(s) 262, 448, 689
Asp700I GAANNNNTTC 1 cut(s) 689
AspLEI GCGC 2 cut(s) 895, 901
AspS9I GGNCC 1 cut(s) 1490
AsuC2I CCSGG 2 cut(s) 163, 695
AsuHPI GGTGA 4 cut(s) 425, 602, 1043, 1213
AsuNHI GCTAGC 1 cut(s) 553
AvaI CYCGRG 1 cut(s) 1027
BaeGI GKGCMC 1 cut(s) 1309
BalI TGGCCA 1 cut(s) 1013
BamHI GGATCC 1 cut(s) 1333
BarI GAAGNNNNNNTAC 2 cut(s) 642, 674
BbrPI CACGTG 1 cut(s) 1292
BbsI GAAGAC 1 cut(s) 1532
Bbv12I GWGCWC 2 cut(s) 1297, 1309
BbvI GCAGC 3 cut(s) 421, 559, 1131
BccI CCATC 2 cut(s) 413, 1222
BceAI ACGGC 2 cut(s) 740, 1367
BciT130I CCWGG 2 cut(s) 1367, 1494
BcnI CCSGG 2 cut(s) 163, 695
BcoDI GTCTC 4 cut(s) 49, 436, 939, 1145
BfaI CTAG 6 cut(s) 291, 342, 470, 554, 749, 1148
BfmI CTRYAG 1 cut(s) 1126
BfoI RGCGCY 1 cut(s) 902
BisI GCNGC 3 cut(s) 435, 573, 1145
BlsI GCNGC 3 cut(s) 436, 574, 1146
Bme1390I CCNGG 4 cut(s) 163, 695, 1367, 1494
BmeT110I CYCGRG 1 cut(s) 1027
BmgT120I GGNCC 1 cut(s) 1490
BmiI GGNNCC 3 cut(s) 832, 1063, 1335
BmrFI CCNGG 4 cut(s) 163, 695, 1367, 1494
BmsI GCATC 4 cut(s) 388, 488, 768, 1368
BmtI GCTAGC 1 cut(s) 557
BoxI GACNNNNGTC 1 cut(s) 1052
BpiI GAAGAC 1 cut(s) 1532
BplI GAGNNNNNCTC 2 cut(s) 157, 189
BpuEI CTTGAG 1 cut(s) 1249
BpuMI CCSGG 2 cut(s) 163, 695
BsaAI YACGTR 1 cut(s) 1292
BsaI GGTCTC 1 cut(s) 49
BsaJI CCNNGG 1 cut(s) 834
BsaXI ACNNNNNCTCC 2 cut(s) 466, 496
Bsc4I CCNNNNNNNGG 2 cut(s) 460, 491
Bse1I ACTGG 3 cut(s) 533, 1165, 1172
BseBI CCWGG 2 cut(s) 1367, 1494
BseDI CCNNGG 1 cut(s) 834
BseGI GGATG 2 cut(s) 783, 1383
BseLI CCNNNNNNNGG 2 cut(s) 460, 491
BseMII CTCAG 6 cut(s) 11, 672, 1313, 1455, 1512, 1515
BseNI ACTGG 3 cut(s) 533, 1165, 1172
BseRI GAGGAG 1 cut(s) 1424
BseSI GKGCMC 1 cut(s) 1309
BseXI GCAGC 3 cut(s) 421, 559, 1131
Bsh1236I CGCG 1 cut(s) 207
BshFI GGCC 3 cut(s) 1013, 1354, 1492
BsiHKAI GWGCWC 2 cut(s) 1297, 1309
BsiHKCI CYCGRG 1 cut(s) 1027
BsiSI CCGG 3 cut(s) 154, 163, 694
BslFI GGGAC 2 cut(s) 537, 687
BslI CCNNNNNNNGG 2 cut(s) 460, 491
BsmAI GTCTC 4 cut(s) 49, 436, 939, 1145
BsmFI GGGAC 2 cut(s) 537, 687
BsmI GAATGC 1 cut(s) 146
BsnI GGCC 3 cut(s) 1013, 1354, 1492
Bso31I GGTCTC 1 cut(s) 49
BsoBI CYCGRG 1 cut(s) 1027
Bsp1286I GDGCHC 2 cut(s) 1297, 1309
Bsp143I GATC 4 cut(s) 167, 544, 1168, 1333
Bsp19I CCATGG 1 cut(s) 834
BspACI CCGC 5 cut(s) 151, 465, 1284, 1375, 1414
BspANI GGCC 3 cut(s) 1013, 1354, 1492
BspCNI CTCAG 6 cut(s) 12, 673, 1314, 1456, 1513, 1514
BspFNI CGCG 1 cut(s) 207
BspHI TCATGA 1 cut(s) 385
BspLI GGNNCC 3 cut(s) 832, 1063, 1335
BspOI GCTAGC 1 cut(s) 557
BspPI GGATC 4 cut(s) 552, 1163, 1328, 1341
BspQI GCTCTTC 1 cut(s) 1237
BspTNI GGTCTC 1 cut(s) 49
BsrBI CCGCTC 1 cut(s) 1414
BsrI ACTGG 3 cut(s) 533, 1165, 1172
BssECI CCNNGG 1 cut(s) 834
BssMI GATC 4 cut(s) 167, 544, 1168, 1333
BssT1I CCWWGG 1 cut(s) 834
Bst2UI CCWGG 2 cut(s) 1367, 1494
Bst4CI ACNGT 3 cut(s) 75, 566, 635
Bst6I CTCTTC 3 cut(s) 1109, 1159, 1237
BstBAI YACGTR 1 cut(s) 1292
BstC8I GCNNGC 6 cut(s) 467, 555, 868, 897, 903, 958
BstDSI CCRYGG 1 cut(s) 834
BstENI CCTNNNNNAGG 1 cut(s) 458
BstF5I GGATG 2 cut(s) 783, 1383
BstFNI CGCG 1 cut(s) 207
BstH2I RGCGCY 1 cut(s) 902
BstHHI GCGC 2 cut(s) 895, 901
BstKTI GATC 4 cut(s) 170, 547, 1171, 1336
BstMAI GTCTC 4 cut(s) 49, 436, 939, 1145
BstMBI GATC 4 cut(s) 167, 544, 1168, 1333
BstMWI GCNNNNNNNGC 1 cut(s) 1292
BstNI CCWGG 2 cut(s) 1367, 1494
BstNSI RCATGY 1 cut(s) 34
BstPAI GACNNNNGTC 1 cut(s) 1052
BstSCI CCNGG 4 cut(s) 161, 693, 1365, 1492
BstSFI CTRYAG 1 cut(s) 1126
BstSLI GKGCMC 1 cut(s) 1309
BstUI CGCG 1 cut(s) 207
BstV1I GCAGC 3 cut(s) 421, 559, 1131
BstV2I GAAGAC 1 cut(s) 1532
BstX2I RGATCY 3 cut(s) 544, 1168, 1333
BstXI CCANNNNNNTGG 1 cut(s) 1057
BstYI RGATCY 3 cut(s) 544, 1168, 1333
BsuRI GGCC 3 cut(s) 1013, 1354, 1492
BtgI CCRYGG 1 cut(s) 834
BtsCI GGATG 2 cut(s) 783, 1383
BtsIMutI CAGTG 2 cut(s) 526, 1461
Cac8I GCNNGC 6 cut(s) 467, 555, 868, 897, 903, 958
CciI TCATGA 1 cut(s) 385
CfoI GCGC 2 cut(s) 895, 901
Cfr13I GGNCC 1 cut(s) 1490
Csp6I GTAC 3 cut(s) 80, 722, 888
CviAII CATG 9 cut(s) 31, 386, 719, 827, 835, 871, 914, 1057, 1532
CviQI GTAC 3 cut(s) 80, 722, 888
DpnI GATC 4 cut(s) 169, 546, 1170, 1335
DpnII GATC 4 cut(s) 167, 544, 1168, 1333
EaeI YGGCCR 1 cut(s) 1011
Eam1104I CTCTTC 3 cut(s) 1109, 1159, 1237
EarI CTCTTC 3 cut(s) 1109, 1159, 1237
EciI GGCGGA 1 cut(s) 140
Eco130I CCWWGG 1 cut(s) 834
Eco31I GGTCTC 1 cut(s) 49
Eco32I GATATC 1 cut(s) 220
Eco57I CTGAAG 4 cut(s) 175, 533, 1269, 1359
Eco72I CACGTG 1 cut(s) 1292
Eco88I CYCGRG 1 cut(s) 1027
EcoNI CCTNNNNNAGG 1 cut(s) 458
EcoO109I RGGNCCY 1 cut(s) 1490
EcoRI GAATTC 1 cut(s) 689
EcoRII CCWGG 2 cut(s) 1365, 1492
EcoRV GATATC 1 cut(s) 220
EcoT14I CCWWGG 1 cut(s) 834
ErhI CCWWGG 1 cut(s) 834
FaeI CATG 9 cut(s) 34, 389, 722, 830, 838, 874, 917, 1060, 1535
FaqI GGGAC 2 cut(s) 537, 687
FatI CATG 9 cut(s) 30, 385, 718, 826, 834, 870, 913, 1056, 1531
FauI CCCGC 2 cut(s) 458, 1291
FblI GTMKAC 1 cut(s) 622
Fnu4HI GCNGC 3 cut(s) 435, 573, 1145
FokI GGATG 2 cut(s) 790, 1390
Fsp4HI GCNGC 3 cut(s) 435, 573, 1145
FspBI CTAG 6 cut(s) 291, 342, 470, 554, 749, 1148
FspI TGCGCA 1 cut(s) 894
GlaI GCGC 2 cut(s) 894, 900
GluI GCNGC 3 cut(s) 435, 573, 1145
HaeII RGCGCY 1 cut(s) 902
HaeIII GGCC 3 cut(s) 1013, 1354, 1492
HapII CCGG 3 cut(s) 154, 163, 694
HhaI GCGC 2 cut(s) 895, 901
Hin1II CATG 9 cut(s) 34, 389, 722, 830, 838, 874, 917, 1060, 1535
Hin6I GCGC 2 cut(s) 893, 899
HinP1I GCGC 2 cut(s) 893, 899
HincII GTYRAC 2 cut(s) 1177, 1261
HindII GTYRAC 2 cut(s) 1177, 1261
HindIII AAGCTT 3 cut(s) 424, 656, 992
HpaII CCGG 3 cut(s) 154, 163, 694
HphI GGTGA 4 cut(s) 425, 602, 1043, 1213
Hpy166II GTNNAC 6 cut(s) 534, 623, 940, 1177, 1261, 1307
Hpy188I TCNGA 6 cut(s) 10, 21, 1000, 1299, 1390, 1504
Hpy188III TCNNGA 5 cut(s) 386, 967, 1045, 1337, 1406
Hpy8I GTNNAC 6 cut(s) 534, 623, 940, 1177, 1261, 1307
HpyAV CCTTC 4 cut(s) 34, 55, 199, 679
HpyCH4III ACNGT 3 cut(s) 75, 566, 635
HpyCH4IV ACGT 3 cut(s) 1186, 1291, 1303
HpyCH4V TGCA 5 cut(s) 146, 379, 759, 989, 1307
HpyF10VI GCNNNNNNNGC 1 cut(s) 1292
HpySE526I ACGT 3 cut(s) 1186, 1291, 1303
Hsp92II CATG 9 cut(s) 34, 389, 722, 830, 838, 874, 917, 1060, 1535
HspAI GCGC 2 cut(s) 893, 899
Kzo9I GATC 4 cut(s) 167, 544, 1168, 1333
LguI GCTCTTC 1 cut(s) 1237
LmnI GCTCC 3 cut(s) 431, 830, 1411
Lsp1109I GCAGC 3 cut(s) 421, 559, 1131
LweI GCATC 4 cut(s) 388, 488, 768, 1368
MaeI CTAG 6 cut(s) 291, 342, 470, 554, 749, 1148
MaeII ACGT 3 cut(s) 1186, 1291, 1303
MaeIII GTNAC 7 cut(s) 183, 293, 472, 806, 1037, 1118, 1496
MalI GATC 4 cut(s) 169, 546, 1170, 1335
MbiI CCGCTC 1 cut(s) 1414
MboI GATC 4 cut(s) 167, 544, 1168, 1333
MflI RGATCY 3 cut(s) 544, 1168, 1333
MhlI GDGCHC 2 cut(s) 1297, 1309
MlsI TGGCCA 1 cut(s) 1013
MluCI AATT 3 cut(s) 262, 448, 689
MluI ACGCGT 1 cut(s) 205
MluNI TGGCCA 1 cut(s) 1013
MlyI GAGTC 6 cut(s) 618, 1019, 1045, 1062, 1256, 1522
MmeI TCCRAC 1 cut(s) 1213
MnlI CCTC 9 cut(s) 586, 700, 757, 856, 1192, 1287, 1402, 1410, 1459
Mox20I TGGCCA 1 cut(s) 1013
MroXI GAANNNNTTC 1 cut(s) 689
MscI TGGCCA 1 cut(s) 1013
MseI TTAA 2 cut(s) 663, 771
MslI CAYNNNNRTG 2 cut(s) 384, 411
Msp20I TGGCCA 1 cut(s) 1013
MspA1I CMGCKG 1 cut(s) 1475
MspI CCGG 3 cut(s) 154, 163, 694
MspR9I CCNGG 4 cut(s) 163, 695, 1367, 1494
Mva1269I GAATGC 1 cut(s) 146
MvaI CCWGG 2 cut(s) 1367, 1494
MvnI CGCG 1 cut(s) 207
MwoI GCNNNNNNNGC 1 cut(s) 1292
NciI CCSGG 2 cut(s) 163, 695
NcoI CCATGG 1 cut(s) 834
NdeII GATC 4 cut(s) 167, 544, 1168, 1333
NheI GCTAGC 1 cut(s) 553
NlaIII CATG 9 cut(s) 34, 389, 722, 830, 838, 874, 917, 1060, 1535
NlaIV GGNNCC 3 cut(s) 832, 1063, 1335
NmuCI GTSAC 4 cut(s) 293, 1037, 1118, 1496
NsbI TGCGCA 1 cut(s) 894
NspI RCATGY 1 cut(s) 34
OliI CACNNNNGTG 1 cut(s) 411
PagI TCATGA 1 cut(s) 385
PciI ACATGT 1 cut(s) 30
PciSI GCTCTTC 1 cut(s) 1237
PctI GAATGC 1 cut(s) 146
PdmI GAANNNNTTC 1 cut(s) 689
PfeI GAWTC 4 cut(s) 733, 1204, 1385, 1469
PfoI TCCNGGA 1 cut(s) 161
PkrI GCNGC 3 cut(s) 436, 574, 1146
PleI GAGTC 6 cut(s) 618, 1019, 1044, 1061, 1256, 1522
PmaCI CACGTG 1 cut(s) 1292
PmlI CACGTG 1 cut(s) 1292
PpsI GAGTC 6 cut(s) 618, 1019, 1044, 1061, 1256, 1522
Ppu21I YACGTR 1 cut(s) 1292
PscI ACATGT 1 cut(s) 30
PshAI GACNNNNGTC 1 cut(s) 1052
PsiI TTATAA 1 cut(s) 615
Psp6I CCWGG 2 cut(s) 1365, 1492
PspCI CACGTG 1 cut(s) 1292
PspGI CCWGG 2 cut(s) 1365, 1492
PspN4I GGNNCC 3 cut(s) 832, 1063, 1335
PspPI GGNCC 1 cut(s) 1490
PsrI GAACNNNNNNTAC 2 cut(s) 807, 839
PsuI RGATCY 3 cut(s) 544, 1168, 1333
PvuII CAGCTG 1 cut(s) 1475
RsaI GTAC 3 cut(s) 81, 723, 889
RsaNI GTAC 3 cut(s) 80, 722, 888
RseI CAYNNNNRTG 2 cut(s) 384, 411
SapI GCTCTTC 1 cut(s) 1237
SaqAI TTAA 2 cut(s) 663, 771
SatI GCNGC 3 cut(s) 435, 573, 1145
Sau3AI GATC 4 cut(s) 167, 544, 1168, 1333
Sau96I GGNCC 1 cut(s) 1490
SchI GAGTC 6 cut(s) 618, 1019, 1045, 1062, 1256, 1522
ScrFI CCNGG 4 cut(s) 163, 695, 1367, 1494
SduI GDGCHC 2 cut(s) 1297, 1309
SfaNI GCATC 4 cut(s) 388, 488, 768, 1368
SfcI CTRYAG 1 cut(s) 1126
SmiMI CAYNNNNRTG 2 cut(s) 384, 411
SmlI CTYRAG 1 cut(s) 1264
SmoI CTYRAG 1 cut(s) 1264
Sse9I AATT 3 cut(s) 262, 448, 689
SsiI CCGC 5 cut(s) 151, 465, 1284, 1375, 1414
SspMI CTAG 6 cut(s) 291, 342, 470, 554, 749, 1148
StyD4I CCNGG 4 cut(s) 161, 693, 1365, 1492
StyI CCWWGG 1 cut(s) 834
TaaI ACNGT 3 cut(s) 75, 566, 635
TaiI ACGT 3 cut(s) 1189, 1294, 1306
TaqI TCGA 2 cut(s) 35, 1212
TasI AATT 3 cut(s) 262, 448, 689
TfiI GAWTC 4 cut(s) 733, 1204, 1385, 1469
Tru1I TTAA 2 cut(s) 663, 771
Tru9I TTAA 2 cut(s) 663, 771
TscAI CASTG 2 cut(s) 533, 1468
TseFI GTSAC 4 cut(s) 293, 1037, 1118, 1496
TseI GCWGC 3 cut(s) 434, 572, 1144
Tsp45I GTSAC 4 cut(s) 293, 1037, 1118, 1496
TspDTI ATGAA 6 cut(s) 83, 273, 887, 930, 1197, 1407
TspRI CASTG 2 cut(s) 533, 1468
VneI GTGCAC 1 cut(s) 1305
XagI CCTNNNNNAGG 1 cut(s) 458
XapI RAATTY 3 cut(s) 262, 448, 689
XceI RCATGY 1 cut(s) 34
XmiI GTMKAC 1 cut(s) 622
XmnI GAANNNNTTC 1 cut(s) 689
XspI CTAG 6 cut(s) 291, 342, 470, 554, 749, 1148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.