RchiOBHm_Chr2g0151691

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
69246985 .. 69252338
5354 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52086

Sequence Viewer

Length: 1533 bp
ATGTCGTCTGAGAGTTCTTTGAACGTGCAATTATCAAAGAAGATATTGGGTATAAAACTATGGGTTTTGATCTGTATAAGTGTTGGTGCATTTATTATTCTGATCCTATGTTTCTTATCTATCTGGGTGACATTTCGGAGGAAATCTAGAAAATCTGTAGACAAGTTTTCAGTCAACCAAATACCAAATGTCTCTAAAGATATCAGGATTGATAGGGTGGGGACTCAGAGTACACATGATCACCCTGATAATTTATTTCTTACAGTACATGATAAAGCAACTGATAAGAATTCAGAGAACATGTTAGCTCATTTGGGAATGAGCAAATCAAGTGACCCTGATAACATGAGTCAGTGCAGTTCAGCTTATCACCATGAGAGGGCATTTAGTTCACAGTCAGGGGACGAAGGAAGCTCCGGGACAGTGCGAAAGCAGTCGTCATTGTCACATGGAGGAGTTGTAACAGCCTCTCCTTTAATTGGTTTGCCAGAATTTTCTCATCTTGGTTGGGGCCACTGGTTTACTCTTAGGGATCTGCAATTTGCTACGAATCGATTTTCTGCTGAAAATGTACTTGGTGAGGGTGGATATGGGGTTGTTTACAGGGGCAGACTGATAAATGGAACTGAGGTGGCAGTGAAAAAGCTTCTAAATAATATGGGGCAGGCGGAGAAAGAATTTAGGGTTGAAGTGGAGGCCATAGGCCACGTTCGGCATAAGAATCTTGTGCGGCTGCTTGGTTATTGCATTGAAGGGGTTCACAGGATGCTGGTGTATGAATATGTGAATAATGGAAACCTAGAACAATGGCTGCATGGGGCCATGCGCCAACAGCAGGGCACCCTTACTTGGGAGGCCCGCATGAAGGTGATTCTTGGTACTGCCAGAGCGCTTTCTTATCTACACGAAGCTATAGAACCAAAAGTTATTCACAGAGATATAAAATCAAGCAACATTCTGATTGATGATGAGTTCAATTCCAAGGTTTCTGATTTTGGATTGGCCAAACTCTTGGATTCAGGAGAAAGTCACATCACCACTAGAGTAATGGGAACATTTGGTTATGTGGCACCAGAATATGCTAATACTGGCTTGTTAAATGAGAAGAGCGACATCTACAGCTTTGGTGTCCTCCTGCTTGAAGCAGTTACTGGCAGGGACCCCGTGGACTATGGTCGGCCTGCTAATGAGGTGAATCTTGTTGAGTGGCTAAAAATGATGGTAGGTGCAAGAAGAGCAGAGGAGGTTGTGGATCCAAACCTTGAAGTAAAACCCAGTACACGTTCTTTAAAACGTGCCCTTTTGGTTGCACTTAGGTGTGTTGATCATGATGCAGAGAACAGACCTAAAATGAGCCAGGTTGTACGTATGCTTGAAGCTGATGAATACCCATCTCGTGAGGATCGAAGGAACAGAAAGACTCGGACAACCAGCATGGAAATTGAATCTTTGAAGGAAAATTCTGTCTCAGGTGACACAGAAAACAAGCCAGAGGATCTGGAAAGCCAAGTAGCCGAGACAACTCATGCATAG

Protein Analysis

510

Amino Acids

57.14

Weight (kDa)

6.67

Isoelectric Point (pI)

37.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 188 - 458 1.7e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 188 - 456 7.5e-47 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 839, 1069
AccI GTMKAC 1 cut(s) 159
AciI CCGC 3 cut(s) 668, 730, 859
AclWI GGATC 6 cut(s) 97, 540, 1247, 1260, 1410, 1503
AcoI YGGCCR 1 cut(s) 1002
AcsI RAATTY 4 cut(s) 289, 491, 677, 1459
AfaI GTAC 6 cut(s) 232, 267, 573, 880, 1279, 1365
AfeI AGCGCT 1 cut(s) 891
AfiI CCNNNNNNNGG 6 cut(s) 379, 479, 835, 849, 850, 865
AflIII ACRYGT 2 cut(s) 300, 1280
AgsI TTSAA 9 cut(s) 22, 689, 752, 976, 1142, 1265, 1376, 1445, 1453
AjnI CCWGG 1 cut(s) 1356
AjuI GAANNNNNNNTTGG 2 cut(s) 558, 590
AleI CACNNNNGTG 1 cut(s) 1315
AluBI AGCT 7 cut(s) 308, 365, 414, 646, 911, 1122, 1379
AluI AGCT 7 cut(s) 308, 365, 414, 646, 911, 1122, 1379
Alw26I GTCTC 3 cut(s) 196, 1471, 1511
AlwI GGATC 6 cut(s) 97, 540, 1247, 1260, 1410, 1503
AlwNI CAGNNNCTG 1 cut(s) 1151
Aor51HI AGCGCT 1 cut(s) 891
AoxI GGCC 7 cut(s) 511, 696, 703, 819, 855, 1002, 1178
ApeKI GCWGC 2 cut(s) 733, 811
ApoI RAATTY 4 cut(s) 289, 491, 677, 1459
Asp700I GAANNNNTTC 1 cut(s) 756
AspLEI GCGC 2 cut(s) 828, 892
AspS9I GGNCC 4 cut(s) 511, 819, 856, 1159
AsuC2I CCSGG 1 cut(s) 418
AsuHPI GGTGA 8 cut(s) 139, 233, 362, 590, 880, 1027, 1204, 1484
AvaII GGWCC 1 cut(s) 1159
BaeGI GKGCMC 2 cut(s) 842, 1300
BalI TGGCCA 1 cut(s) 1004
BamHI GGATCC 1 cut(s) 1252
BanI GGYRCC 2 cut(s) 839, 1069
BauI CACGAG 1 cut(s) 1395
BbvI GCAGC 2 cut(s) 720, 798
BccI CCATC 2 cut(s) 1213, 1399
BciT130I CCWGG 1 cut(s) 1358
BclI TGATCA 2 cut(s) 238, 1324
BcnI CCSGG 1 cut(s) 418
BcoDI GTCTC 3 cut(s) 196, 1471, 1511
BfaI CTAG 3 cut(s) 147, 800, 1041
BfmI CTRYAG 3 cut(s) 156, 912, 1117
BfoI RGCGCY 1 cut(s) 893
BisI GCNGC 3 cut(s) 731, 734, 812
BlsI GCNGC 3 cut(s) 732, 735, 813
Bme1390I CCNGG 2 cut(s) 418, 1358
Bme18I GGWCC 1 cut(s) 1159
BmgT120I GGNCC 4 cut(s) 511, 819, 856, 1159
BmiI GGNNCC 7 cut(s) 512, 820, 841, 1071, 1160, 1161, 1254
BmrFI CCNGG 2 cut(s) 418, 1358
BmrI ACTGGG 1 cut(s) 1269
BmsI GCATC 2 cut(s) 756, 1321
BmuI ACTGGG 1 cut(s) 1269
BoxI GACNNNNGTC 1 cut(s) 1173
BpuMI CCSGG 1 cut(s) 418
Bsa29I ATCGAT 1 cut(s) 553
BsaAI YACGTR 1 cut(s) 1367
BsaJI CCNNGG 2 cut(s) 981, 1164
BsaXI ACNNNNNCTCC 4 cut(s) 444, 454, 474, 484
Bsc4I CCNNNNNNNGG 6 cut(s) 379, 479, 835, 849, 850, 865
Bse1I ACTGG 4 cut(s) 521, 1093, 1156, 1275
BseBI CCWGG 1 cut(s) 1358
BseCI ATCGAT 1 cut(s) 553
BseDI CCNNGG 2 cut(s) 981, 1164
BseGI GGATG 1 cut(s) 771
BseLI CCNNNNNNNGG 6 cut(s) 379, 479, 835, 849, 850, 865
BseMII CTCAG 3 cut(s) 239, 618, 1482
BseNI ACTGG 4 cut(s) 521, 1093, 1156, 1275
BseRI GAGGAG 2 cut(s) 468, 1256
BseSI GKGCMC 2 cut(s) 842, 1300
BseXI GCAGC 2 cut(s) 720, 798
BsgI GTGCAG 1 cut(s) 376
BshFI GGCC 7 cut(s) 513, 698, 705, 821, 857, 1004, 1180
BshNI GGYRCC 2 cut(s) 839, 1069
BshVI ATCGAT 1 cut(s) 553
BsiSI CCGG 1 cut(s) 417
BslFI GGGAC 4 cut(s) 235, 416, 433, 1172
BslI CCNNNNNNNGG 6 cut(s) 379, 479, 835, 849, 850, 865
BsmAI GTCTC 3 cut(s) 196, 1471, 1511
BsmFI GGGAC 4 cut(s) 235, 416, 433, 1172
BsnI GGCC 7 cut(s) 513, 698, 705, 821, 857, 1004, 1180
Bsp1286I GDGCHC 2 cut(s) 842, 1300
Bsp143I GATC 8 cut(s) 69, 102, 238, 532, 1252, 1324, 1402, 1495
BspACI CCGC 3 cut(s) 668, 730, 859
BspANI GGCC 7 cut(s) 513, 698, 705, 821, 857, 1004, 1180
BspCNI CTCAG 3 cut(s) 238, 619, 1481
BspDI ATCGAT 1 cut(s) 553
BspHI TCATGA 1 cut(s) 1327
BspLI GGNNCC 7 cut(s) 512, 820, 841, 1071, 1160, 1161, 1254
BspPI GGATC 6 cut(s) 97, 540, 1247, 1260, 1410, 1503
BspQI GCTCTTC 2 cut(s) 1100, 1228
BspT107I GGYRCC 2 cut(s) 839, 1069
BsrI ACTGG 4 cut(s) 521, 1093, 1156, 1275
BssECI CCNNGG 2 cut(s) 981, 1164
BssMI GATC 8 cut(s) 69, 102, 238, 532, 1252, 1324, 1402, 1495
BssSI CACGAG 1 cut(s) 1395
BssT1I CCWWGG 1 cut(s) 981
Bst2BI CACGAG 1 cut(s) 1395
Bst2UI CCWGG 1 cut(s) 1358
Bst4CI ACNGT 3 cut(s) 265, 396, 424
Bst6I CTCTTC 2 cut(s) 1100, 1228
BstBAI YACGTR 1 cut(s) 1367
BstC8I GCNNGC 3 cut(s) 666, 859, 1182
BstDEI CTNAG 6 cut(s) 9, 225, 527, 627, 1313, 1468
BstDSI CCRYGG 1 cut(s) 1164
BstF5I GGATG 1 cut(s) 771
BstH2I RGCGCY 1 cut(s) 893
BstHHI GCGC 2 cut(s) 828, 892
BstKTI GATC 8 cut(s) 72, 105, 241, 535, 1255, 1327, 1405, 1498
BstMAI GTCTC 3 cut(s) 196, 1471, 1511
BstMBI GATC 8 cut(s) 69, 102, 238, 532, 1252, 1324, 1402, 1495
BstMWI GCNNNNNNNGC 2 cut(s) 832, 1235
BstNI CCWGG 1 cut(s) 1358
BstNSI RCATGY 1 cut(s) 304
BstPAI GACNNNNGTC 1 cut(s) 1173
BstSCI CCNGG 2 cut(s) 416, 1356
BstSFI CTRYAG 3 cut(s) 156, 912, 1117
BstSLI GKGCMC 2 cut(s) 842, 1300
BstSNI TACGTA 1 cut(s) 1367
BstV1I GCAGC 2 cut(s) 720, 798
BstX2I RGATCY 3 cut(s) 532, 1252, 1495
BstXI CCANNNNNNTGG 1 cut(s) 1012
BstYI RGATCY 3 cut(s) 532, 1252, 1495
Bsu15I ATCGAT 1 cut(s) 553
BsuRI GGCC 7 cut(s) 513, 698, 705, 821, 857, 1004, 1180
BsuTUI ATCGAT 1 cut(s) 553
BtgI CCRYGG 1 cut(s) 1164
BtsCI GGATG 1 cut(s) 771
BtsI GCAGTG 1 cut(s) 642
BtsIMutI CAGTG 4 cut(s) 359, 429, 514, 642
Cac8I GCNNGC 3 cut(s) 666, 859, 1182
CaiI CAGNNNCTG 1 cut(s) 1151
CciI TCATGA 1 cut(s) 1327
CfoI GCGC 2 cut(s) 828, 892
Cfr13I GGNCC 4 cut(s) 511, 819, 856, 1159
ClaI ATCGAT 1 cut(s) 553
Csp6I GTAC 6 cut(s) 231, 266, 572, 879, 1278, 1364
CviQI GTAC 6 cut(s) 231, 266, 572, 879, 1278, 1364
DdeI CTNAG 6 cut(s) 9, 225, 527, 627, 1313, 1468
DpnI GATC 8 cut(s) 71, 104, 240, 534, 1254, 1326, 1404, 1497
DpnII GATC 8 cut(s) 69, 102, 238, 532, 1252, 1324, 1402, 1495
DraI TTTAAA 1 cut(s) 1290
EaeI YGGCCR 1 cut(s) 1002
Eam1104I CTCTTC 2 cut(s) 1100, 1228
EarI CTCTTC 2 cut(s) 1100, 1228
EciI GGCGGA 1 cut(s) 683
Eco105I TACGTA 1 cut(s) 1367
Eco130I CCWWGG 1 cut(s) 981
Eco32I GATATC 1 cut(s) 202
Eco47I GGWCC 1 cut(s) 1159
Eco47III AGCGCT 1 cut(s) 891
EcoO109I RGGNCCY 1 cut(s) 1159
EcoRI GAATTC 1 cut(s) 289
EcoRII CCWGG 1 cut(s) 1356
EcoRV GATATC 1 cut(s) 202
EcoT14I CCWWGG 1 cut(s) 981
EcoT22I ATGCAT 1 cut(s) 1531
ErhI CCWWGG 1 cut(s) 981
FaqI GGGAC 4 cut(s) 235, 416, 433, 1172
FauI CCCGC 1 cut(s) 866
FbaI TGATCA 2 cut(s) 238, 1324
FblI GTMKAC 1 cut(s) 159
Fnu4HI GCNGC 3 cut(s) 731, 734, 812
FokI GGATG 1 cut(s) 778
Fsp4HI GCNGC 3 cut(s) 731, 734, 812
FspBI CTAG 3 cut(s) 147, 800, 1041
GlaI GCGC 2 cut(s) 827, 891
GluI GCNGC 3 cut(s) 731, 734, 812
HaeII RGCGCY 1 cut(s) 893
HaeIII GGCC 7 cut(s) 513, 698, 705, 821, 857, 1004, 1180
HapII CCGG 1 cut(s) 417
HhaI GCGC 2 cut(s) 828, 892
Hin6I GCGC 2 cut(s) 826, 890
HinP1I GCGC 2 cut(s) 826, 890
HincII GTYRAC 1 cut(s) 175
HindII GTYRAC 1 cut(s) 175
HindIII AAGCTT 1 cut(s) 644
HinfI GANTC 9 cut(s) 223, 349, 550, 721, 871, 1016, 1195, 1420, 1445
HpaII CCGG 1 cut(s) 417
HphI GGTGA 8 cut(s) 139, 233, 362, 590, 880, 1027, 1204, 1484
Hpy166II GTNNAC 9 cut(s) 160, 175, 233, 392, 522, 601, 760, 1168, 1280
Hpy188I TCNGA 8 cut(s) 10, 102, 138, 228, 295, 960, 991, 1425
Hpy188III TCNNGA 6 cut(s) 147, 205, 1020, 1328, 1397, 1499
Hpy8I GTNNAC 9 cut(s) 160, 175, 233, 392, 522, 601, 760, 1168, 1280
HpyAV CCTTC 5 cut(s) 401, 746, 859, 1401, 1447
HpyCH4III ACNGT 3 cut(s) 265, 396, 424
HpyCH4IV ACGT 5 cut(s) 24, 708, 1282, 1294, 1366
HpyF10VI GCNNNNNNNGC 2 cut(s) 832, 1235
HpyF3I CTNAG 6 cut(s) 9, 225, 527, 627, 1313, 1468
HpySE526I ACGT 5 cut(s) 24, 708, 1282, 1294, 1366
HspAI GCGC 2 cut(s) 826, 890
KflI GGGWCCC 1 cut(s) 1159
Ksp22I TGATCA 2 cut(s) 238, 1324
Kzo9I GATC 8 cut(s) 69, 102, 238, 532, 1252, 1324, 1402, 1495
LguI GCTCTTC 2 cut(s) 1100, 1228
LmnI GCTCC 1 cut(s) 419
Lsp1109I GCAGC 2 cut(s) 720, 798
LweI GCATC 2 cut(s) 756, 1321
MaeI CTAG 3 cut(s) 147, 800, 1041
MaeII ACGT 5 cut(s) 24, 708, 1282, 1294, 1366
MaeIII GTNAC 7 cut(s) 127, 332, 444, 460, 1028, 1147, 1472
MalI GATC 8 cut(s) 71, 104, 240, 534, 1254, 1326, 1404, 1497
MboI GATC 8 cut(s) 69, 102, 238, 532, 1252, 1324, 1402, 1495
MboII GAAGA 3 cut(s) 52, 1117, 1245
MflI RGATCY 3 cut(s) 532, 1252, 1495
MhlI GDGCHC 2 cut(s) 842, 1300
MlsI TGGCCA 1 cut(s) 1004
MluNI TGGCCA 1 cut(s) 1004
MlyI GAGTC 3 cut(s) 217, 358, 1414
Mox20I TGGCCA 1 cut(s) 1004
Mph1103I ATGCAT 1 cut(s) 1531
MroXI GAANNNNTTC 1 cut(s) 756
MscI TGGCCA 1 cut(s) 1004
MseI TTAA 3 cut(s) 476, 1097, 1289
MslI CAYNNNNRTG 2 cut(s) 866, 1315
Msp20I TGGCCA 1 cut(s) 1004
MspI CCGG 1 cut(s) 417
MspR9I CCNGG 2 cut(s) 418, 1358
MvaI CCWGG 1 cut(s) 1358
MwoI GCNNNNNNNGC 2 cut(s) 832, 1235
NciI CCSGG 1 cut(s) 418
NdeII GATC 8 cut(s) 69, 102, 238, 532, 1252, 1324, 1402, 1495
NlaIV GGNNCC 7 cut(s) 512, 820, 841, 1071, 1160, 1161, 1254
NmuCI GTSAC 5 cut(s) 127, 332, 444, 1028, 1472
NsiI ATGCAT 1 cut(s) 1531
NspI RCATGY 1 cut(s) 304
OliI CACNNNNGTG 1 cut(s) 1315
PagI TCATGA 1 cut(s) 1327
PciI ACATGT 1 cut(s) 300
PciSI GCTCTTC 2 cut(s) 1100, 1228
PcsI WCGNNNNNNNCGW 1 cut(s) 1402
PdmI GAANNNNTTC 1 cut(s) 756
PfeI GAWTC 6 cut(s) 550, 721, 871, 1016, 1195, 1445
PfoI TCCNGGA 1 cut(s) 416
PkrI GCNGC 3 cut(s) 732, 735, 813
PleI GAGTC 3 cut(s) 217, 357, 1414
PpsI GAGTC 3 cut(s) 217, 357, 1414
Ppu21I YACGTR 1 cut(s) 1367
PpuMI RGGWCCY 1 cut(s) 1159
PscI ACATGT 1 cut(s) 300
PshAI GACNNNNGTC 1 cut(s) 1173
Psp5II RGGWCCY 1 cut(s) 1159
Psp6I CCWGG 1 cut(s) 1356
PspGI CCWGG 1 cut(s) 1356
PspN4I GGNNCC 7 cut(s) 512, 820, 841, 1071, 1160, 1161, 1254
PspPI GGNCC 4 cut(s) 511, 819, 856, 1159
PspPPI RGGWCCY 1 cut(s) 1159
PstNI CAGNNNCTG 1 cut(s) 1151
PsuI RGATCY 3 cut(s) 532, 1252, 1495
RsaI GTAC 6 cut(s) 232, 267, 573, 880, 1279, 1365
RsaNI GTAC 6 cut(s) 231, 266, 572, 879, 1278, 1364
RseI CAYNNNNRTG 2 cut(s) 866, 1315
SapI GCTCTTC 2 cut(s) 1100, 1228
SaqAI TTAA 3 cut(s) 476, 1097, 1289
SatI GCNGC 3 cut(s) 731, 734, 812
Sau3AI GATC 8 cut(s) 69, 102, 238, 532, 1252, 1324, 1402, 1495
Sau96I GGNCC 4 cut(s) 511, 819, 856, 1159
SchI GAGTC 3 cut(s) 217, 358, 1414
ScrFI CCNGG 2 cut(s) 418, 1358
SduI GDGCHC 2 cut(s) 842, 1300
SfaNI GCATC 2 cut(s) 756, 1321
SfcI CTRYAG 3 cut(s) 156, 912, 1117
SinI GGWCC 1 cut(s) 1159
SmiMI CAYNNNNRTG 2 cut(s) 866, 1315
SnaBI TACGTA 1 cut(s) 1367
SsiI CCGC 3 cut(s) 668, 730, 859
SspMI CTAG 3 cut(s) 147, 800, 1041
StyD4I CCNGG 2 cut(s) 416, 1356
StyI CCWWGG 1 cut(s) 981
TaaI ACNGT 3 cut(s) 265, 396, 424
TaiI ACGT 5 cut(s) 27, 711, 1285, 1297, 1369
TaqI TCGA 2 cut(s) 553, 1405
TatI WGTACW 4 cut(s) 230, 265, 571, 1277
TauI GCSGC 1 cut(s) 733
TfiI GAWTC 6 cut(s) 550, 721, 871, 1016, 1195, 1445
Tru1I TTAA 3 cut(s) 476, 1097, 1289
Tru9I TTAA 3 cut(s) 476, 1097, 1289
TscAI CASTG 4 cut(s) 359, 429, 521, 642
TseFI GTSAC 5 cut(s) 127, 332, 444, 1028, 1472
TseI GCWGC 2 cut(s) 733, 811
Tsp45I GTSAC 5 cut(s) 127, 332, 444, 1028, 1472
TspDTI ATGAA 3 cut(s) 792, 878, 1398
TspRI CASTG 4 cut(s) 359, 429, 521, 642
VpaK11BI GGWCC 1 cut(s) 1159
XapI RAATTY 4 cut(s) 289, 491, 677, 1459
XbaI TCTAGA 1 cut(s) 146
XceI RCATGY 1 cut(s) 304
XcmI CCANNNNNNNNNTGG 1 cut(s) 1045
XmiI GTMKAC 1 cut(s) 159
XmnI GAANNNNTTC 1 cut(s) 756
XspI CTAG 3 cut(s) 147, 800, 1041
Zsp2I ATGCAT 1 cut(s) 1531
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.