Rh2AG488900

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
71091012 .. 71094311
3300 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG488900.1

Sequence Viewer

Length: 1362 bp
ATGTCGTCTGAGAGTTCTTTGAATGTGCAATTATCAAAGAAGATATTGGGTATAAAACTATGGGTTTTGATCTGTATAAGTGTTGGTGCATTTATTATTCTGATCCTATGTTTCTTATCTATCTGGGTGACATTTCGGAGGAAATCTAGAAAATCTGTAGACAAGTTTTCAGTCAACCAAATACCAAATGTCTCTAAAGATATCAGGATTGATAGGGTGGGGGCTCAGAGTACAAATGATCACCCTGATAATTTATTTCTTACAGTACATGATAAAGCAACTGATAAGAATTCAGAGAACATGTTAGCTCATTTGGGAATGAGCAAATCAAGTGACCCTGATAACATGAGTCAGTGCAGTTCAGTTTATCACCATGAGAGGGCATTTAGTTCACAGTCAGGGGACGAAGGAAGCTCCGGGACTGTGCGAAAGCAGTCGTCATTGTCACATGGAGGAGTTGTAACGGCCTCTCCTTTAATTGGTTTGCCAGAAGTTTCTCATCTTGGTTGGGGCCACTGGTTTACTCTTAGGGATCTGCAATTTGCTACGAATCGATTTTCTGCTGAAAATGTACTTGGTGAGGGTGGATATGGGGTTGTTTACAGGGGCAGACTGATAAATGGAACTGAGGTGGCAGTGAAAAAGCTTCTAAATAATATGGGGCAGGCGGAGAAAGAATTTAGGGTTGAAGTGGAGGCCATAGGCCATGTTCGGCATAAGAATCTTGTGCGGCTGCTTGGTTATTGCATTGAAGGGGTTCACAGGATGCTGGTGTATGAATATGTGAATAATGGAAACCTAGAACAATGGCTGCATGGGGCCATGCGCCAACAGCAGGGCACCCTTACTTGGGAGGCCCGCATGAAGGTGATTCTTGGTACTGCCAGAGCTTATGTGGCACCAGAATATGCTAATACTGGCTTGTTAAACGAGAAGAGCGACATCTACAGCTTTGGTGTCCTCCTGCTTGAAGCAGTTACTGGCAGGGACCCCGTGGACTATGGTCGGCCTGCTAATGAGGTGAATCTTGTTGAGTGGCTAAAAATGATGGTAGGTGCAAGAAGAGCAGAGGAGGTTGTGGATCCAAACCTTGAAGTAAAACCCACTACACGTTCTTTAAAACGTGCCCTTTTGGTTGCACTTAGGTGTGTTGATCATGATGCAGAGAACAGACCTAAAATGAGCCAGGTTGTACGTATGCTTGAAGCTGATGAATACCCATCTCGTGAGGATCGAAGGAACAGAAAGACTCGGACAACCAGCATGGAAATTGAATCTTTGAAGGAAAATTCTGTCTCAGGTGACACAGAAAACAAGCCAGAGGATCTGGAAAGCCAAGTAGCCGAGACAACTCATGCATAG

Protein Analysis

453

Amino Acids

50.75

Weight (kDa)

7.25

Isoelectric Point (pI)

36.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 188 - 296 2.4e-17 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 188 - 281 2.3e-13 Protein kinase domain
Pkinase PF00069 288 - 399 2e-06 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 297 - 401 1e-08 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 839, 898
AccI GTMKAC 1 cut(s) 159
AciI CCGC 3 cut(s) 668, 730, 859
AclWI GGATC 6 cut(s) 97, 540, 1076, 1089, 1239, 1332
AcsI RAATTY 3 cut(s) 289, 677, 1288
AfaI GTAC 5 cut(s) 232, 267, 573, 880, 1194
AfiI CCNNNNNNNGG 6 cut(s) 379, 479, 835, 849, 850, 865
AflIII ACRYGT 2 cut(s) 300, 1109
AgsI TTSAA 8 cut(s) 22, 689, 752, 971, 1094, 1205, 1274, 1282
AjnI CCWGG 1 cut(s) 1185
AjuI GAANNNNNNNTTGG 2 cut(s) 558, 590
AleI CACNNNNGTG 1 cut(s) 1144
AluBI AGCT 6 cut(s) 308, 414, 646, 890, 951, 1208
AluI AGCT 6 cut(s) 308, 414, 646, 890, 951, 1208
Alw26I GTCTC 3 cut(s) 196, 1300, 1340
AlwI GGATC 6 cut(s) 97, 540, 1076, 1089, 1239, 1332
AlwNI CAGNNNCTG 1 cut(s) 980
AoxI GGCC 7 cut(s) 465, 511, 696, 703, 819, 855, 1007
ApeKI GCWGC 2 cut(s) 733, 811
ApoI RAATTY 3 cut(s) 289, 677, 1288
Asp700I GAANNNNTTC 1 cut(s) 756
AspLEI GCGC 1 cut(s) 828
AspS9I GGNCC 4 cut(s) 511, 819, 856, 988
AsuC2I CCSGG 1 cut(s) 418
AsuHPI GGTGA 7 cut(s) 139, 233, 362, 590, 880, 1033, 1313
AvaII GGWCC 1 cut(s) 988
BaeGI GKGCMC 2 cut(s) 842, 1129
BamHI GGATCC 1 cut(s) 1081
BanI GGYRCC 2 cut(s) 839, 898
BanII GRGCYC 1 cut(s) 226
BauI CACGAG 1 cut(s) 1224
BbvI GCAGC 2 cut(s) 720, 798
BccI CCATC 2 cut(s) 1042, 1228
BceAI ACGGC 1 cut(s) 480
BciT130I CCWGG 1 cut(s) 1187
BclI TGATCA 2 cut(s) 238, 1153
BcnI CCSGG 1 cut(s) 418
BcoDI GTCTC 3 cut(s) 196, 1300, 1340
BfaI CTAG 2 cut(s) 147, 800
BfmI CTRYAG 2 cut(s) 156, 946
BisI GCNGC 3 cut(s) 731, 734, 812
BlsI GCNGC 3 cut(s) 732, 735, 813
Bme1390I CCNGG 2 cut(s) 418, 1187
Bme18I GGWCC 1 cut(s) 988
BmgT120I GGNCC 4 cut(s) 511, 819, 856, 988
BmiI GGNNCC 7 cut(s) 512, 820, 841, 900, 989, 990, 1083
BmrFI CCNGG 2 cut(s) 418, 1187
BmsI GCATC 2 cut(s) 756, 1150
BoxI GACNNNNGTC 1 cut(s) 1002
BpuMI CCSGG 1 cut(s) 418
Bsa29I ATCGAT 1 cut(s) 553
BsaAI YACGTR 1 cut(s) 1196
BsaJI CCNNGG 1 cut(s) 993
BsaXI ACNNNNNCTCC 4 cut(s) 444, 454, 474, 484
Bsc4I CCNNNNNNNGG 6 cut(s) 379, 479, 835, 849, 850, 865
Bse1I ACTGG 3 cut(s) 521, 922, 985
BseBI CCWGG 1 cut(s) 1187
BseCI ATCGAT 1 cut(s) 553
BseDI CCNNGG 1 cut(s) 993
BseGI GGATG 1 cut(s) 771
BseLI CCNNNNNNNGG 6 cut(s) 379, 479, 835, 849, 850, 865
BseMII CTCAG 3 cut(s) 239, 618, 1311
BseNI ACTGG 3 cut(s) 521, 922, 985
BseRI GAGGAG 2 cut(s) 468, 1085
BseSI GKGCMC 2 cut(s) 842, 1129
BseXI GCAGC 2 cut(s) 720, 798
BsgI GTGCAG 1 cut(s) 376
BshFI GGCC 7 cut(s) 467, 513, 698, 705, 821, 857, 1009
BshNI GGYRCC 2 cut(s) 839, 898
BshVI ATCGAT 1 cut(s) 553
BsiSI CCGG 1 cut(s) 417
BslFI GGGAC 3 cut(s) 416, 433, 1001
BslI CCNNNNNNNGG 6 cut(s) 379, 479, 835, 849, 850, 865
BsmAI GTCTC 3 cut(s) 196, 1300, 1340
BsmFI GGGAC 3 cut(s) 416, 433, 1001
BsnI GGCC 7 cut(s) 467, 513, 698, 705, 821, 857, 1009
Bsp1286I GDGCHC 3 cut(s) 226, 842, 1129
Bsp143I GATC 8 cut(s) 69, 102, 238, 532, 1081, 1153, 1231, 1324
BspACI CCGC 3 cut(s) 668, 730, 859
BspANI GGCC 7 cut(s) 467, 513, 698, 705, 821, 857, 1009
BspCNI CTCAG 3 cut(s) 238, 619, 1310
BspDI ATCGAT 1 cut(s) 553
BspHI TCATGA 1 cut(s) 1156
BspLI GGNNCC 7 cut(s) 512, 820, 841, 900, 989, 990, 1083
BspPI GGATC 6 cut(s) 97, 540, 1076, 1089, 1239, 1332
BspQI GCTCTTC 2 cut(s) 929, 1057
BspT107I GGYRCC 2 cut(s) 839, 898
BsrI ACTGG 3 cut(s) 521, 922, 985
BssECI CCNNGG 1 cut(s) 993
BssMI GATC 8 cut(s) 69, 102, 238, 532, 1081, 1153, 1231, 1324
BssSI CACGAG 1 cut(s) 1224
Bst2BI CACGAG 1 cut(s) 1224
Bst2UI CCWGG 1 cut(s) 1187
Bst4CI ACNGT 3 cut(s) 265, 396, 424
Bst6I CTCTTC 2 cut(s) 929, 1057
BstBAI YACGTR 1 cut(s) 1196
BstC8I GCNNGC 3 cut(s) 666, 859, 1011
BstDEI CTNAG 6 cut(s) 9, 225, 527, 627, 1142, 1297
BstDSI CCRYGG 1 cut(s) 993
BstF5I GGATG 1 cut(s) 771
BstHHI GCGC 1 cut(s) 828
BstKTI GATC 8 cut(s) 72, 105, 241, 535, 1084, 1156, 1234, 1327
BstMAI GTCTC 3 cut(s) 196, 1300, 1340
BstMBI GATC 8 cut(s) 69, 102, 238, 532, 1081, 1153, 1231, 1324
BstMWI GCNNNNNNNGC 3 cut(s) 832, 896, 1064
BstNI CCWGG 1 cut(s) 1187
BstNSI RCATGY 1 cut(s) 304
BstPAI GACNNNNGTC 1 cut(s) 1002
BstSCI CCNGG 2 cut(s) 416, 1185
BstSFI CTRYAG 2 cut(s) 156, 946
BstSLI GKGCMC 2 cut(s) 842, 1129
BstSNI TACGTA 1 cut(s) 1196
BstV1I GCAGC 2 cut(s) 720, 798
BstX2I RGATCY 3 cut(s) 532, 1081, 1324
BstYI RGATCY 3 cut(s) 532, 1081, 1324
Bsu15I ATCGAT 1 cut(s) 553
BsuRI GGCC 7 cut(s) 467, 513, 698, 705, 821, 857, 1009
BsuTUI ATCGAT 1 cut(s) 553
BtgI CCRYGG 1 cut(s) 993
BtsCI GGATG 1 cut(s) 771
BtsI GCAGTG 1 cut(s) 642
BtsIMutI CAGTG 3 cut(s) 359, 514, 642
Cac8I GCNNGC 3 cut(s) 666, 859, 1011
CaiI CAGNNNCTG 1 cut(s) 980
CciI TCATGA 1 cut(s) 1156
CfoI GCGC 1 cut(s) 828
Cfr13I GGNCC 4 cut(s) 511, 819, 856, 988
ClaI ATCGAT 1 cut(s) 553
Csp6I GTAC 5 cut(s) 231, 266, 572, 879, 1193
CviQI GTAC 5 cut(s) 231, 266, 572, 879, 1193
DdeI CTNAG 6 cut(s) 9, 225, 527, 627, 1142, 1297
DpnI GATC 8 cut(s) 71, 104, 240, 534, 1083, 1155, 1233, 1326
DpnII GATC 8 cut(s) 69, 102, 238, 532, 1081, 1153, 1231, 1324
DraI TTTAAA 1 cut(s) 1119
Eam1104I CTCTTC 2 cut(s) 929, 1057
EarI CTCTTC 2 cut(s) 929, 1057
EciI GGCGGA 1 cut(s) 683
Eco105I TACGTA 1 cut(s) 1196
Eco24I GRGCYC 1 cut(s) 226
Eco32I GATATC 1 cut(s) 202
Eco47I GGWCC 1 cut(s) 988
EcoO109I RGGNCCY 1 cut(s) 988
EcoRI GAATTC 1 cut(s) 289
EcoRII CCWGG 1 cut(s) 1185
EcoRV GATATC 1 cut(s) 202
EcoT22I ATGCAT 1 cut(s) 1360
EcoT38I GRGCYC 1 cut(s) 226
FaqI GGGAC 3 cut(s) 416, 433, 1001
FauI CCCGC 1 cut(s) 866
FbaI TGATCA 2 cut(s) 238, 1153
FblI GTMKAC 1 cut(s) 159
Fnu4HI GCNGC 3 cut(s) 731, 734, 812
FokI GGATG 1 cut(s) 778
FriOI GRGCYC 1 cut(s) 226
Fsp4HI GCNGC 3 cut(s) 731, 734, 812
FspBI CTAG 2 cut(s) 147, 800
GlaI GCGC 1 cut(s) 827
GluI GCNGC 3 cut(s) 731, 734, 812
HaeIII GGCC 7 cut(s) 467, 513, 698, 705, 821, 857, 1009
HapII CCGG 1 cut(s) 417
HhaI GCGC 1 cut(s) 828
Hin6I GCGC 1 cut(s) 826
HinP1I GCGC 1 cut(s) 826
HincII GTYRAC 1 cut(s) 175
HindII GTYRAC 1 cut(s) 175
HindIII AAGCTT 1 cut(s) 644
HinfI GANTC 7 cut(s) 349, 550, 721, 871, 1024, 1249, 1274
HpaII CCGG 1 cut(s) 417
HphI GGTGA 7 cut(s) 139, 233, 362, 590, 880, 1033, 1313
Hpy166II GTNNAC 7 cut(s) 160, 175, 392, 522, 601, 760, 997
Hpy188I TCNGA 6 cut(s) 10, 102, 138, 228, 295, 1254
Hpy188III TCNNGA 5 cut(s) 147, 205, 1157, 1226, 1328
Hpy8I GTNNAC 7 cut(s) 160, 175, 392, 522, 601, 760, 997
HpyAV CCTTC 5 cut(s) 401, 746, 859, 1230, 1276
HpyCH4III ACNGT 3 cut(s) 265, 396, 424
HpyCH4IV ACGT 3 cut(s) 1111, 1123, 1195
HpyF10VI GCNNNNNNNGC 3 cut(s) 832, 896, 1064
HpyF3I CTNAG 6 cut(s) 9, 225, 527, 627, 1142, 1297
HpySE526I ACGT 3 cut(s) 1111, 1123, 1195
HspAI GCGC 1 cut(s) 826
KflI GGGWCCC 1 cut(s) 988
Ksp22I TGATCA 2 cut(s) 238, 1153
Kzo9I GATC 8 cut(s) 69, 102, 238, 532, 1081, 1153, 1231, 1324
LguI GCTCTTC 2 cut(s) 929, 1057
LmnI GCTCC 1 cut(s) 419
Lsp1109I GCAGC 2 cut(s) 720, 798
LweI GCATC 2 cut(s) 756, 1150
MaeI CTAG 2 cut(s) 147, 800
MaeII ACGT 3 cut(s) 1111, 1123, 1195
MaeIII GTNAC 6 cut(s) 127, 332, 444, 460, 976, 1301
MalI GATC 8 cut(s) 71, 104, 240, 534, 1083, 1155, 1233, 1326
MboI GATC 8 cut(s) 69, 102, 238, 532, 1081, 1153, 1231, 1324
MboII GAAGA 3 cut(s) 52, 946, 1074
MflI RGATCY 3 cut(s) 532, 1081, 1324
MhlI GDGCHC 3 cut(s) 226, 842, 1129
MluCI AATT 8 cut(s) 29, 250, 289, 477, 539, 677, 1269, 1288
MlyI GAGTC 2 cut(s) 358, 1243
Mph1103I ATGCAT 1 cut(s) 1360
MroXI GAANNNNTTC 1 cut(s) 756
MseI TTAA 3 cut(s) 476, 926, 1118
MslI CAYNNNNRTG 2 cut(s) 866, 1144
MspI CCGG 1 cut(s) 417
MspR9I CCNGG 2 cut(s) 418, 1187
MvaI CCWGG 1 cut(s) 1187
MwoI GCNNNNNNNGC 3 cut(s) 832, 896, 1064
NciI CCSGG 1 cut(s) 418
NdeII GATC 8 cut(s) 69, 102, 238, 532, 1081, 1153, 1231, 1324
NlaIV GGNNCC 7 cut(s) 512, 820, 841, 900, 989, 990, 1083
NmuCI GTSAC 4 cut(s) 127, 332, 444, 1301
NsiI ATGCAT 1 cut(s) 1360
NspI RCATGY 1 cut(s) 304
OliI CACNNNNGTG 1 cut(s) 1144
PagI TCATGA 1 cut(s) 1156
PciI ACATGT 1 cut(s) 300
PciSI GCTCTTC 2 cut(s) 929, 1057
PcsI WCGNNNNNNNCGW 2 cut(s) 936, 1231
PdmI GAANNNNTTC 1 cut(s) 756
PfeI GAWTC 5 cut(s) 550, 721, 871, 1024, 1274
PfoI TCCNGGA 1 cut(s) 416
PkrI GCNGC 3 cut(s) 732, 735, 813
PleI GAGTC 2 cut(s) 357, 1243
PpsI GAGTC 2 cut(s) 357, 1243
Ppu21I YACGTR 1 cut(s) 1196
PpuMI RGGWCCY 1 cut(s) 988
PscI ACATGT 1 cut(s) 300
PshAI GACNNNNGTC 1 cut(s) 1002
Psp5II RGGWCCY 1 cut(s) 988
Psp6I CCWGG 1 cut(s) 1185
PspGI CCWGG 1 cut(s) 1185
PspN4I GGNNCC 7 cut(s) 512, 820, 841, 900, 989, 990, 1083
PspPI GGNCC 4 cut(s) 511, 819, 856, 988
PspPPI RGGWCCY 1 cut(s) 988
PstNI CAGNNNCTG 1 cut(s) 980
PsuI RGATCY 3 cut(s) 532, 1081, 1324
RsaI GTAC 5 cut(s) 232, 267, 573, 880, 1194
RsaNI GTAC 5 cut(s) 231, 266, 572, 879, 1193
RseI CAYNNNNRTG 2 cut(s) 866, 1144
SapI GCTCTTC 2 cut(s) 929, 1057
SaqAI TTAA 3 cut(s) 476, 926, 1118
SatI GCNGC 3 cut(s) 731, 734, 812
Sau3AI GATC 8 cut(s) 69, 102, 238, 532, 1081, 1153, 1231, 1324
Sau96I GGNCC 4 cut(s) 511, 819, 856, 988
SchI GAGTC 2 cut(s) 358, 1243
ScrFI CCNGG 2 cut(s) 418, 1187
SduI GDGCHC 3 cut(s) 226, 842, 1129
SfaNI GCATC 2 cut(s) 756, 1150
SfcI CTRYAG 2 cut(s) 156, 946
SinI GGWCC 1 cut(s) 988
SmiMI CAYNNNNRTG 2 cut(s) 866, 1144
SnaBI TACGTA 1 cut(s) 1196
Sse9I AATT 8 cut(s) 29, 250, 289, 477, 539, 677, 1269, 1288
SsiI CCGC 3 cut(s) 668, 730, 859
SspMI CTAG 2 cut(s) 147, 800
StyD4I CCNGG 2 cut(s) 416, 1185
TaaI ACNGT 3 cut(s) 265, 396, 424
TaiI ACGT 3 cut(s) 1114, 1126, 1198
TaqI TCGA 2 cut(s) 553, 1234
TasI AATT 8 cut(s) 29, 250, 289, 477, 539, 677, 1269, 1288
TatI WGTACW 3 cut(s) 230, 265, 571
TauI GCSGC 1 cut(s) 733
TfiI GAWTC 5 cut(s) 550, 721, 871, 1024, 1274
Tru1I TTAA 3 cut(s) 476, 926, 1118
Tru9I TTAA 3 cut(s) 476, 926, 1118
TscAI CASTG 3 cut(s) 359, 521, 642
TseFI GTSAC 4 cut(s) 127, 332, 444, 1301
TseI GCWGC 2 cut(s) 733, 811
Tsp45I GTSAC 4 cut(s) 127, 332, 444, 1301
TspDTI ATGAA 3 cut(s) 792, 878, 1227
TspRI CASTG 3 cut(s) 359, 521, 642
VpaK11BI GGWCC 1 cut(s) 988
XapI RAATTY 3 cut(s) 289, 677, 1288
XbaI TCTAGA 1 cut(s) 146
XceI RCATGY 1 cut(s) 304
XcmI CCANNNNNNNNNTGG 1 cut(s) 892
XmiI GTMKAC 1 cut(s) 159
XmnI GAANNNNTTC 1 cut(s) 756
XspI CTAG 2 cut(s) 147, 800
Zsp2I ATGCAT 1 cut(s) 1360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.