pycom17g13120

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
10804649 .. 10807186
2538 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g13120.5

Sequence Viewer

Length: 1545 bp
ATGTCATCCGGGAGTTCAAGTTCTTTGAATGTGGAATTATCAAAGAAGATAGGATTTTTGGGTTTGAAACTATGGGTTGTAATCGGTATATGTGTTGGTGCATTTATTGTTTTGATCGATCTATGTTTCTTATCTATATGGGTTTCATTTCGGAGGAAGTCTCGAAGATCAGTGGACAAGTTCCCAGTCACCCAAATACCAAATGTCTCTAAAGATATCAACATTGATAAGATGGCGGCTCAGGGTACCCATGATCACCCTGATAATTTATTTCATTCAGTACATGATAAAGCAAGTGATAAGAATTCAGAGAAGATGTTAGTTCAATTAGGCACGAGCAAATCGATTGATCCTAATAACATGAGTCAGTGCAGCTCAATTTATCATCATGAGAGGGCACTTAGTTCACAGTCGGGGGAAGAAGGAAGCTCTGGGACTGTGCAAAAGCAGTCGTCATTGTCTTGTGGAGGACTTGTTGCAGCCTCTCCTTTAGTTGGCTTGCCAGAAGTTTCTCATCTTGGGTGGGGTCACTGGTTCACTCTTAGGGATCTGCAATTTGCTACAAATCATTTTTCTGCAGAAAATGTGCTTGGTGAGGGTGGATATGGAGTTGTTTACAAGGGCCGGCTGATCAATGGAACTGAGGTGGCAGTGAAAAAACTCTTAAATAACCTGGGGCAGGCAGAGAAAGAATTTAGGGTTGAAGTGGAGGCCATTGGTCATGTTCGGCATAAGAATCTTGTGCGGCTCTTGGGTTACTGCATAGAAGGTGTTCACAGGATGCTGGTGTATGAATATGTGAACAATGGAAATCTAGAGCAATGGCTACATGGGGCCATGAGCCAACATGGCACCCTTACTTGGGAGGCTCGCATGAAGGTGATTCTTGGTACTGCTAAAGCGCTTTCTTATCTACATGAAGCTATAGAACCAAAAGTTGTCCACAGAGATATAAAATCAAGCAACATTTTGATTGATGACGAGTTCAATGCCAAGGTTTCTGATTTTGGACTGGCTAAACTCTTGGGTTCAGGAGAAAGTCACATCACGACTAGAGTCATGGGGACTTTTGGTTATGTGGCACCAGAATATGCTAATACTGGCTTGTTAAATGAGAAGAGCGACATCTACAGCTTTGGTGTCCTCCTACTTGAAGCAGTTACGGGAAGGGATCCTGTGGACTATGGCCGACCGGCTAATGAGGTCAATCTAGTTGAGTGGCTAAAGTTGATGGTAGGTGCAAGAAGAGCCGAGGAAGTTGTGGATCCAAACCTTGAAGTTAAACCCAGTACACGTGCCTTAAAACGTGCCCTTTTGGTTGCACTTCGGTGTGTTGATCATGATTCGGAGAACAGGCCCAAAATGAGCCAGGTTGTGCGTATGCTCGAAGCTGATGAATACCCATTTCGTGAGGATCGAAGGAACAGAAGGAGTCGTACAGCCAGCATGGATATGGAATCTATGAAGGAAAGTTCTGCCTCTGTCGACATAGAAAAGAAGCCAGGGGATCTGGAGAGCCAAATATCCGAGACAAGCCATGGATAG

Protein Analysis

515

Amino Acids

56.96

Weight (kDa)

6.69

Isoelectric Point (pI)

40.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 245
AccB1I GGYRCC 3 cut(s) 245, 851, 1081
AccI GTMKAC 1 cut(s) 1485
AciI CCGC 2 cut(s) 236, 745
AclWI GGATC 8 cut(s) 344, 555, 1166, 1179, 1259, 1272, 1422, 1515
AcoI YGGCCR 1 cut(s) 1186
AcsI RAATTY 2 cut(s) 304, 692
AcvI CACGTG 1 cut(s) 1295
AfaI GTAC 5 cut(s) 247, 282, 892, 1291, 1438
AfeI AGCGCT 1 cut(s) 903
AfiI CCNNNNNNNGG 4 cut(s) 494, 679, 861, 862
AflIII ACRYGT 1 cut(s) 1292
AgsI TTSAA 8 cut(s) 18, 28, 67, 326, 704, 988, 1154, 1277
AjnI CCWGG 3 cut(s) 672, 1368, 1501
AjuI GAANNNNNNNTTGG 2 cut(s) 573, 605
AleI CACNNNNGTG 1 cut(s) 1327
AloI GAACNNNNNNTCC 1 cut(s) 36
AluBI AGCT 5 cut(s) 375, 429, 923, 1134, 1391
AluI AGCT 5 cut(s) 375, 429, 923, 1134, 1391
Alw26I GTCTC 3 cut(s) 165, 211, 1523
AlwI GGATC 8 cut(s) 344, 555, 1166, 1179, 1259, 1272, 1422, 1515
Aor51HI AGCGCT 1 cut(s) 903
AoxI GGCC 5 cut(s) 622, 711, 834, 1186, 1355
ApeKI GCWGC 2 cut(s) 372, 479
ApoI RAATTY 2 cut(s) 304, 692
Asp700I GAANNNNTTC 1 cut(s) 771
Asp718I GGTACC 1 cut(s) 245
AspLEI GCGC 1 cut(s) 904
AspS9I GGNCC 3 cut(s) 622, 834, 1356
AsuC2I CCSGG 1 cut(s) 10
AsuHPI GGTGA 4 cut(s) 181, 248, 605, 892
BaeGI GKGCMC 2 cut(s) 400, 1312
BamHI GGATCC 2 cut(s) 1171, 1264
BanI GGYRCC 3 cut(s) 245, 851, 1081
BarI GAAGNNNNNNTAC 2 cut(s) 1420, 1452
BauI CACGAG 1 cut(s) 334
BbrPI CACGTG 1 cut(s) 1295
BbvI GCAGC 2 cut(s) 384, 491
BccI CCATC 2 cut(s) 226, 1225
BcgI CGANNNNNNTGC 2 cut(s) 971, 1005
BciT130I CCWGG 3 cut(s) 674, 1370, 1503
BclI TGATCA 3 cut(s) 253, 630, 1336
BcnI CCSGG 1 cut(s) 10
BcoDI GTCTC 3 cut(s) 165, 211, 1523
BfaI CTAG 3 cut(s) 815, 1053, 1211
BfmI CTRYAG 3 cut(s) 576, 924, 1129
BfoI RGCGCY 1 cut(s) 905
BglI GCCNNNNNGGC 1 cut(s) 849
BisI GCNGC 4 cut(s) 237, 373, 480, 746
BlsI GCNGC 4 cut(s) 238, 374, 481, 747
Bme1390I CCNGG 4 cut(s) 10, 674, 1370, 1503
BmgT120I GGNCC 3 cut(s) 622, 834, 1356
BmiI GGNNCC 6 cut(s) 247, 835, 853, 1083, 1173, 1266
BmrFI CCNGG 4 cut(s) 10, 674, 1370, 1503
BmrI ACTGGG 2 cut(s) 179, 1281
BmsI GCATC 1 cut(s) 771
BmuI ACTGGG 2 cut(s) 179, 1281
BoxI GACNNNNGTC 1 cut(s) 1055
BplI GAGNNNNNCTC 2 cut(s) 145, 177
BpmI CTGGAG 1 cut(s) 1532
Bpu10I CCTNAGC 1 cut(s) 240
BpuMI CCSGG 1 cut(s) 10
Bsa29I ATCGAT 2 cut(s) 117, 344
BsaAI YACGTR 1 cut(s) 1295
BsaJI CCNNGG 5 cut(s) 673, 993, 1251, 1502, 1537
BsaXI ACNNNNNCTCC 3 cut(s) 34, 459, 489
Bsc4I CCNNNNNNNGG 4 cut(s) 494, 679, 861, 862
Bse118I RCCGGY 2 cut(s) 624, 1192
Bse1I ACTGG 5 cut(s) 185, 536, 1017, 1105, 1287
Bse3DI GCAATG 1 cut(s) 827
BseBI CCWGG 3 cut(s) 674, 1370, 1503
BseCI ATCGAT 2 cut(s) 117, 344
BseDI CCNNGG 5 cut(s) 673, 993, 1251, 1502, 1537
BseGI GGATG 2 cut(s) 5, 786
BseLI CCNNNNNNNGG 4 cut(s) 494, 679, 861, 862
BseMI GCAATG 1 cut(s) 827
BseMII CTCAG 2 cut(s) 254, 633
BseNI ACTGG 5 cut(s) 185, 536, 1017, 1105, 1287
BseSI GKGCMC 2 cut(s) 400, 1312
BseXI GCAGC 2 cut(s) 384, 491
BsgI GTGCAG 1 cut(s) 391
Bsh1285I CGRYCG 1 cut(s) 1193
BshFI GGCC 5 cut(s) 624, 713, 836, 1188, 1357
BshNI GGYRCC 3 cut(s) 245, 851, 1081
BshVI ATCGAT 2 cut(s) 117, 344
BsiEI CGRYCG 1 cut(s) 1193
BsiSI CCGG 3 cut(s) 9, 625, 1193
BslFI GGGAC 2 cut(s) 448, 1078
BslI CCNNNNNNNGG 4 cut(s) 494, 679, 861, 862
BsmAI GTCTC 3 cut(s) 165, 211, 1523
BsmFI GGGAC 2 cut(s) 448, 1078
BsnI GGCC 5 cut(s) 624, 713, 836, 1188, 1357
Bsp1286I GDGCHC 2 cut(s) 400, 1312
Bsp19I CCATGG 1 cut(s) 1537
BspACI CCGC 2 cut(s) 236, 745
BspANI GGCC 5 cut(s) 624, 713, 836, 1188, 1357
BspCNI CTCAG 2 cut(s) 253, 634
BspDI ATCGAT 2 cut(s) 117, 344
BspHI TCATGA 2 cut(s) 388, 1339
BspLI GGNNCC 6 cut(s) 247, 835, 853, 1083, 1173, 1266
BspMAI CTGCAG 1 cut(s) 580
BspPI GGATC 8 cut(s) 344, 555, 1166, 1179, 1259, 1272, 1422, 1515
BspQI GCTCTTC 2 cut(s) 1112, 1240
BspT107I GGYRCC 3 cut(s) 245, 851, 1081
BsrDI GCAATG 1 cut(s) 827
BsrFI RCCGGY 2 cut(s) 624, 1192
BsrI ACTGG 5 cut(s) 185, 536, 1017, 1105, 1287
BssAI RCCGGY 2 cut(s) 624, 1192
BssECI CCNNGG 5 cut(s) 673, 993, 1251, 1502, 1537
BssSI CACGAG 1 cut(s) 334
BssT1I CCWWGG 2 cut(s) 993, 1537
Bst2BI CACGAG 1 cut(s) 334
Bst2UI CCWGG 3 cut(s) 674, 1370, 1503
Bst4CI ACNGT 2 cut(s) 411, 439
Bst6I CTCTTC 2 cut(s) 1112, 1240
BstBAI YACGTR 1 cut(s) 1295
BstC8I GCNNGC 5 cut(s) 500, 626, 681, 871, 1444
BstDEI CTNAG 4 cut(s) 240, 401, 542, 642
BstDSI CCRYGG 1 cut(s) 1537
BstENI CCTNNNNNAGG 1 cut(s) 677
BstF5I GGATG 2 cut(s) 5, 786
BstH2I RGCGCY 1 cut(s) 905
BstHHI GCGC 1 cut(s) 904
BstMAI GTCTC 3 cut(s) 165, 211, 1523
BstMCI CGRYCG 1 cut(s) 1193
BstMWI GCNNNNNNNGC 2 cut(s) 849, 1247
BstNI CCWGG 3 cut(s) 674, 1370, 1503
BstPAI GACNNNNGTC 1 cut(s) 1055
BstSCI CCNGG 4 cut(s) 8, 672, 1368, 1501
BstSFI CTRYAG 3 cut(s) 576, 924, 1129
BstSLI GKGCMC 2 cut(s) 400, 1312
BstV1I GCAGC 2 cut(s) 384, 491
BstX2I RGATCY 4 cut(s) 547, 1171, 1264, 1507
BstYI RGATCY 4 cut(s) 547, 1171, 1264, 1507
Bsu15I ATCGAT 2 cut(s) 117, 344
BsuRI GGCC 5 cut(s) 624, 713, 836, 1188, 1357
BsuTUI ATCGAT 2 cut(s) 117, 344
BtgI CCRYGG 1 cut(s) 1537
BtsCI GGATG 2 cut(s) 5, 786
BtsI GCAGTG 1 cut(s) 657
BtsIMutI CAGTG 4 cut(s) 177, 374, 529, 657
Cac8I GCNNGC 5 cut(s) 500, 626, 681, 871, 1444
CciI TCATGA 2 cut(s) 388, 1339
CfoI GCGC 1 cut(s) 904
Cfr10I RCCGGY 2 cut(s) 624, 1192
Cfr13I GGNCC 3 cut(s) 622, 834, 1356
ClaI ATCGAT 2 cut(s) 117, 344
Csp6I GTAC 5 cut(s) 246, 281, 891, 1290, 1437
CviQI GTAC 5 cut(s) 246, 281, 891, 1290, 1437
DdeI CTNAG 4 cut(s) 240, 401, 542, 642
EaeI YGGCCR 1 cut(s) 1186
Eam1104I CTCTTC 2 cut(s) 1112, 1240
EarI CTCTTC 2 cut(s) 1112, 1240
Eco130I CCWWGG 2 cut(s) 993, 1537
Eco32I GATATC 1 cut(s) 217
Eco47III AGCGCT 1 cut(s) 903
Eco72I CACGTG 1 cut(s) 1295
EcoNI CCTNNNNNAGG 1 cut(s) 677
EcoRI GAATTC 1 cut(s) 304
EcoRII CCWGG 3 cut(s) 672, 1368, 1501
EcoRV GATATC 1 cut(s) 217
EcoT14I CCWWGG 2 cut(s) 993, 1537
ErhI CCWWGG 2 cut(s) 993, 1537
FaqI GGGAC 2 cut(s) 448, 1078
FbaI TGATCA 3 cut(s) 253, 630, 1336
FblI GTMKAC 1 cut(s) 1485
Fnu4HI GCNGC 4 cut(s) 237, 373, 480, 746
FokI GGATG 1 cut(s) 793
Fsp4HI GCNGC 4 cut(s) 237, 373, 480, 746
FspBI CTAG 3 cut(s) 815, 1053, 1211
GlaI GCGC 1 cut(s) 903
GluI GCNGC 4 cut(s) 237, 373, 480, 746
GsuI CTGGAG 1 cut(s) 1532
HaeII RGCGCY 1 cut(s) 905
HaeIII GGCC 5 cut(s) 624, 713, 836, 1188, 1357
HapII CCGG 3 cut(s) 9, 625, 1193
HhaI GCGC 1 cut(s) 904
Hin6I GCGC 1 cut(s) 902
HinP1I GCGC 1 cut(s) 902
HincII GTYRAC 1 cut(s) 1486
HindII GTYRAC 1 cut(s) 1486
HinfI GANTC 7 cut(s) 364, 736, 883, 1056, 1343, 1432, 1457
HpaII CCGG 3 cut(s) 9, 625, 1193
HphI GGTGA 4 cut(s) 181, 248, 605, 892
Hpy188I TCNGA 5 cut(s) 153, 310, 1003, 1348, 1528
Hpy188III TCNNGA 8 cut(s) 162, 389, 815, 1032, 1048, 1340, 1409, 1511
HpyAV CCTTC 7 cut(s) 416, 761, 871, 1161, 1413, 1422, 1459
HpyCH4III ACNGT 2 cut(s) 411, 439
HpyCH4IV ACGT 2 cut(s) 1294, 1306
HpyCH4V TGCA 9 cut(s) 101, 372, 442, 479, 553, 578, 762, 1241, 1322
HpyF10VI GCNNNNNNNGC 2 cut(s) 849, 1247
HpyF3I CTNAG 4 cut(s) 240, 401, 542, 642
HpySE526I ACGT 2 cut(s) 1294, 1306
HspAI GCGC 1 cut(s) 902
KpnI GGTACC 1 cut(s) 249
KroI GCCGGC 1 cut(s) 624
KroNI GCCGGC 1 cut(s) 626
Ksp22I TGATCA 3 cut(s) 253, 630, 1336
LguI GCTCTTC 2 cut(s) 1112, 1240
Lsp1109I GCAGC 2 cut(s) 384, 491
LweI GCATC 1 cut(s) 771
MaeI CTAG 3 cut(s) 815, 1053, 1211
MaeII ACGT 2 cut(s) 1294, 1306
MaeIII GTNAC 5 cut(s) 187, 527, 755, 1040, 1159
MboII GAAGA 6 cut(s) 58, 177, 325, 431, 1129, 1257
MflI RGATCY 4 cut(s) 547, 1171, 1264, 1507
MhlI GDGCHC 2 cut(s) 400, 1312
MluCI AATT 7 cut(s) 35, 265, 304, 326, 378, 554, 692
MlyI GAGTC 3 cut(s) 373, 1065, 1441
MroNI GCCGGC 1 cut(s) 624
MroXI GAANNNNTTC 1 cut(s) 771
MseI TTAA 4 cut(s) 665, 1109, 1281, 1301
MslI CAYNNNNRTG 3 cut(s) 878, 1327, 1451
MspI CCGG 3 cut(s) 9, 625, 1193
MspR9I CCNGG 4 cut(s) 10, 674, 1370, 1503
MvaI CCWGG 3 cut(s) 674, 1370, 1503
MwoI GCNNNNNNNGC 2 cut(s) 849, 1247
NaeI GCCGGC 1 cut(s) 626
NciI CCSGG 1 cut(s) 10
NcoI CCATGG 1 cut(s) 1537
NgoMIV GCCGGC 1 cut(s) 624
NlaIV GGNNCC 6 cut(s) 247, 835, 853, 1083, 1173, 1266
NmeAIII GCCGAG 1 cut(s) 1276
NmuCI GTSAC 3 cut(s) 187, 527, 1040
OliI CACNNNNGTG 1 cut(s) 1327
PagI TCATGA 2 cut(s) 388, 1339
PciSI GCTCTTC 2 cut(s) 1112, 1240
PcsI WCGNNNNNNNCGW 2 cut(s) 341, 1414
PdiI GCCGGC 1 cut(s) 626
PdmI GAANNNNTTC 1 cut(s) 771
PfeI GAWTC 4 cut(s) 736, 883, 1343, 1457
PfoI TCCNGGA 1 cut(s) 8
PkrI GCNGC 4 cut(s) 238, 374, 481, 747
PleI GAGTC 3 cut(s) 372, 1064, 1440
PmaCI CACGTG 1 cut(s) 1295
PmlI CACGTG 1 cut(s) 1295
PpsI GAGTC 3 cut(s) 372, 1064, 1440
Ppu21I YACGTR 1 cut(s) 1295
PshAI GACNNNNGTC 1 cut(s) 1055
Psp6I CCWGG 3 cut(s) 672, 1368, 1501
PspCI CACGTG 1 cut(s) 1295
PspGI CCWGG 3 cut(s) 672, 1368, 1501
PspN4I GGNNCC 6 cut(s) 247, 835, 853, 1083, 1173, 1266
PspPI GGNCC 3 cut(s) 622, 834, 1356
PstI CTGCAG 1 cut(s) 580
PsuI RGATCY 4 cut(s) 547, 1171, 1264, 1507
RsaI GTAC 5 cut(s) 247, 282, 892, 1291, 1438
RsaNI GTAC 5 cut(s) 246, 281, 891, 1290, 1437
RseI CAYNNNNRTG 3 cut(s) 878, 1327, 1451
SalI GTCGAC 1 cut(s) 1484
SapI GCTCTTC 2 cut(s) 1112, 1240
SaqAI TTAA 4 cut(s) 665, 1109, 1281, 1301
SatI GCNGC 4 cut(s) 237, 373, 480, 746
Sau96I GGNCC 3 cut(s) 622, 834, 1356
SchI GAGTC 3 cut(s) 373, 1065, 1441
ScrFI CCNGG 4 cut(s) 10, 674, 1370, 1503
SduI GDGCHC 2 cut(s) 400, 1312
SfaNI GCATC 1 cut(s) 771
SfcI CTRYAG 3 cut(s) 576, 924, 1129
SmiMI CAYNNNNRTG 3 cut(s) 878, 1327, 1451
Sse9I AATT 7 cut(s) 35, 265, 304, 326, 378, 554, 692
SsiI CCGC 2 cut(s) 236, 745
SspMI CTAG 3 cut(s) 815, 1053, 1211
StyD4I CCNGG 4 cut(s) 8, 672, 1368, 1501
StyI CCWWGG 2 cut(s) 993, 1537
TaaI ACNGT 2 cut(s) 411, 439
TaiI ACGT 2 cut(s) 1297, 1309
TaqI TCGA 6 cut(s) 117, 163, 344, 1386, 1417, 1485
TasI AATT 7 cut(s) 35, 265, 304, 326, 378, 554, 692
TatI WGTACW 2 cut(s) 280, 1289
TauI GCSGC 2 cut(s) 239, 748
TfiI GAWTC 4 cut(s) 736, 883, 1343, 1457
Tru1I TTAA 4 cut(s) 665, 1109, 1281, 1301
Tru9I TTAA 4 cut(s) 665, 1109, 1281, 1301
TscAI CASTG 4 cut(s) 177, 374, 536, 657
TseFI GTSAC 3 cut(s) 187, 527, 1040
TseI GCWGC 2 cut(s) 372, 479
Tsp45I GTSAC 3 cut(s) 187, 527, 1040
TspDTI ATGAA 7 cut(s) 135, 263, 807, 890, 933, 1410, 1478
TspRI CASTG 4 cut(s) 177, 374, 536, 657
XagI CCTNNNNNAGG 1 cut(s) 677
XapI RAATTY 2 cut(s) 304, 692
XbaI TCTAGA 1 cut(s) 814
XcmI CCANNNNNNNNNTGG 1 cut(s) 1450
XmiI GTMKAC 1 cut(s) 1485
XmnI GAANNNNTTC 1 cut(s) 771
XspI CTAG 3 cut(s) 815, 1053, 1211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.