RLG00000020569

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
66353589 .. 66356720
3132 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020569

Sequence Viewer

Length: 1443 bp
ATGTCGTCTGAGAGTTCTTTGAATGTGCAATTATCAAAGAAGATATTGGGTATAAAACTATGGGTTTTGATCTGTATAAGTGTTGGTGCATTTATTATTCTGATCCTATGTTTCTTATCTATCTGGGTGACATTTCGGAGGAAATCTAGAAAATCTATAGACAAGTTTTCAGTCAACCAAATACCAAATGTCTCTAAAGATATCAGGATTGATAGGGTGGGGGCTCAGAGTACACATGATCACCCTGATAATTTATTTCTTACAGTACATGATAAAGCAACTGATAAGAATTCAGAGAACATGTTAGCTCATTTGGGAATGAGCAAATCAAGTGACCCTGATAACATGAGTCAGTGCAGTTCAGTTTATCACCATGAGAGGGCATTTAGTTCACAGTCAGGGGACGAAGGAAGCTCCGGGACTGTGCGAAAGCAGTCATCATTGTCACATGGAGGAGTTGTAACGGCCTCTCCTTTAATTGGTTTGCCAGAAGTTTCTCATCTTGGTTGGGGCCACTGGTTTACTCTTAGGGATCTGCAATTTGCTACGAATCGATTTTCTGCTGAAAATGTACTTGGTGAGGGTGGATATGGGGTTGTTTACAGGGGCAGACTGATAAATGGAACTGAGGTGGCAGTGAAAAAGCTTCTAAATAATATGGGGCAGGCGGAGAAAGAATTTAGGGTTGAAGTGGAGGCCATAGGCCACGTTCGGCATAAGAATCTTGTGCGGCTGCTTGGTTATTGCATTGAAGGGGTTCACAGGATGCTGGTGTATGAATATGTGAATAATGGAAACCTAGAACAATGGCTGCATGGGGCCATGCGCCAACAGCAGGGCACCCTTACTTGGGAGGCCCGCATGAAGGTGATTCTTGGTACTGCCAGAGCGCTTTCTTATCTACACGAAGCTATCGAACCAAAAGTTATTCACAGAGATATAAAATCAAGCAACATTCTGATTGATGATGATTATGTGGCACCAGAATATGCTAATACTGGCTTGTTAAATGAGAAGAGCGACATCTACAGCTTTGGTGTCCTCCTGCTTGAAGCAGTTACTGGCAGGGACCCCGTGGACTATGGTCGGCCTGCTAATGAGGTGAATCTTGTTGAGTGGCTAAAAATGATGGTAGGTGCAAGAAGAGCAGAGGAGGTTGTGGATCCAAACCTTGAAGTAAAACCCAGTACACGTTCTTTAAAGCGTGCCCTTTTGGTTGCACTTAGGTGTGTTGATCATGATGCAGAGAACAGACCTAAAATGAGCCAGGTTGTACGTATGCTTGAAGCTGAGGAATACCCATCTCGTGAGGATCGAAGGAACAGAAAGACTCGGACAACCAGCATGGAAATTGAATCTTTGAAGGAAAATTCTGTCTCAGGTGACACAGAAAACAAGCCAGAGGATCTGGAAAGCCAAGTAGCCGAGACAACTCATGCATAG

Protein Analysis

481

Amino Acids

53.91

Weight (kDa)

6.64

Isoelectric Point (pI)

39.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 188 - 324 2.4e-26 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 188 - 323 2e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 325 - 428 2e-08 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 839, 979
AciI CCGC 3 cut(s) 668, 730, 859
AclWI GGATC 6 cut(s) 97, 540, 1157, 1170, 1320, 1413
AcsI RAATTY 3 cut(s) 289, 677, 1369
AfaI GTAC 6 cut(s) 232, 267, 573, 880, 1189, 1275
AfeI AGCGCT 1 cut(s) 891
AfiI CCNNNNNNNGG 6 cut(s) 379, 479, 835, 849, 850, 865
AflIII ACRYGT 2 cut(s) 300, 1190
AgsI TTSAA 8 cut(s) 22, 689, 752, 1052, 1175, 1286, 1355, 1363
AjnI CCWGG 1 cut(s) 1266
AjuI GAANNNNNNNTTGG 2 cut(s) 558, 590
AleI CACNNNNGTG 1 cut(s) 1225
AluBI AGCT 6 cut(s) 308, 414, 646, 911, 1032, 1289
AluI AGCT 6 cut(s) 308, 414, 646, 911, 1032, 1289
Alw26I GTCTC 3 cut(s) 196, 1381, 1421
AlwI GGATC 6 cut(s) 97, 540, 1157, 1170, 1320, 1413
AlwNI CAGNNNCTG 1 cut(s) 1061
Aor51HI AGCGCT 1 cut(s) 891
AoxI GGCC 7 cut(s) 465, 511, 696, 703, 819, 855, 1088
ApeKI GCWGC 2 cut(s) 733, 811
ApoI RAATTY 3 cut(s) 289, 677, 1369
Asp700I GAANNNNTTC 1 cut(s) 756
AspLEI GCGC 2 cut(s) 828, 892
AspS9I GGNCC 4 cut(s) 511, 819, 856, 1069
AsuC2I CCSGG 1 cut(s) 418
AsuHPI GGTGA 7 cut(s) 139, 233, 362, 590, 880, 1114, 1394
AvaII GGWCC 1 cut(s) 1069
BaeGI GKGCMC 2 cut(s) 842, 1210
BamHI GGATCC 1 cut(s) 1162
BanI GGYRCC 2 cut(s) 839, 979
BanII GRGCYC 1 cut(s) 226
BauI CACGAG 1 cut(s) 1305
BbvCI CCTCAGC 1 cut(s) 1290
BbvI GCAGC 2 cut(s) 720, 798
BccI CCATC 2 cut(s) 1123, 1309
BceAI ACGGC 1 cut(s) 480
BciT130I CCWGG 1 cut(s) 1268
BclI TGATCA 2 cut(s) 238, 1234
BcnI CCSGG 1 cut(s) 418
BcoDI GTCTC 3 cut(s) 196, 1381, 1421
BfaI CTAG 2 cut(s) 147, 800
BfmI CTRYAG 2 cut(s) 156, 1027
BfoI RGCGCY 1 cut(s) 893
BisI GCNGC 3 cut(s) 731, 734, 812
BlsI GCNGC 3 cut(s) 732, 735, 813
Bme1390I CCNGG 2 cut(s) 418, 1268
Bme18I GGWCC 1 cut(s) 1069
BmgT120I GGNCC 4 cut(s) 511, 819, 856, 1069
BmiI GGNNCC 7 cut(s) 512, 820, 841, 981, 1070, 1071, 1164
BmrFI CCNGG 2 cut(s) 418, 1268
BmrI ACTGGG 1 cut(s) 1179
BmsI GCATC 2 cut(s) 756, 1231
BmuI ACTGGG 1 cut(s) 1179
BoxI GACNNNNGTC 1 cut(s) 1083
Bpu10I CCTNAGC 1 cut(s) 1290
BpuMI CCSGG 1 cut(s) 418
Bsa29I ATCGAT 1 cut(s) 553
BsaAI YACGTR 1 cut(s) 1277
BsaJI CCNNGG 1 cut(s) 1074
BsaXI ACNNNNNCTCC 4 cut(s) 444, 454, 474, 484
Bsc4I CCNNNNNNNGG 6 cut(s) 379, 479, 835, 849, 850, 865
Bse1I ACTGG 4 cut(s) 521, 1003, 1066, 1185
BseBI CCWGG 1 cut(s) 1268
BseCI ATCGAT 1 cut(s) 553
BseDI CCNNGG 1 cut(s) 1074
BseGI GGATG 1 cut(s) 771
BseLI CCNNNNNNNGG 6 cut(s) 379, 479, 835, 849, 850, 865
BseMII CTCAG 4 cut(s) 239, 618, 1281, 1392
BseNI ACTGG 4 cut(s) 521, 1003, 1066, 1185
BseRI GAGGAG 2 cut(s) 468, 1166
BseSI GKGCMC 2 cut(s) 842, 1210
BseXI GCAGC 2 cut(s) 720, 798
BsgI GTGCAG 1 cut(s) 376
BshFI GGCC 7 cut(s) 467, 513, 698, 705, 821, 857, 1090
BshNI GGYRCC 2 cut(s) 839, 979
BshVI ATCGAT 1 cut(s) 553
BsiSI CCGG 1 cut(s) 417
BslFI GGGAC 3 cut(s) 416, 433, 1082
BslI CCNNNNNNNGG 6 cut(s) 379, 479, 835, 849, 850, 865
BsmAI GTCTC 3 cut(s) 196, 1381, 1421
BsmFI GGGAC 3 cut(s) 416, 433, 1082
BsnI GGCC 7 cut(s) 467, 513, 698, 705, 821, 857, 1090
Bsp1286I GDGCHC 3 cut(s) 226, 842, 1210
Bsp143I GATC 8 cut(s) 69, 102, 238, 532, 1162, 1234, 1312, 1405
BspACI CCGC 3 cut(s) 668, 730, 859
BspANI GGCC 7 cut(s) 467, 513, 698, 705, 821, 857, 1090
BspCNI CTCAG 4 cut(s) 238, 619, 1282, 1391
BspDI ATCGAT 1 cut(s) 553
BspHI TCATGA 1 cut(s) 1237
BspLI GGNNCC 7 cut(s) 512, 820, 841, 981, 1070, 1071, 1164
BspPI GGATC 6 cut(s) 97, 540, 1157, 1170, 1320, 1413
BspQI GCTCTTC 2 cut(s) 1010, 1138
BspT107I GGYRCC 2 cut(s) 839, 979
BsrI ACTGG 4 cut(s) 521, 1003, 1066, 1185
BssECI CCNNGG 1 cut(s) 1074
BssMI GATC 8 cut(s) 69, 102, 238, 532, 1162, 1234, 1312, 1405
BssSI CACGAG 1 cut(s) 1305
Bst2BI CACGAG 1 cut(s) 1305
Bst2UI CCWGG 1 cut(s) 1268
Bst4CI ACNGT 3 cut(s) 265, 396, 424
Bst6I CTCTTC 2 cut(s) 1010, 1138
BstBAI YACGTR 1 cut(s) 1277
BstC8I GCNNGC 4 cut(s) 666, 859, 1092, 1206
BstDEI CTNAG 7 cut(s) 9, 225, 527, 627, 1223, 1290, 1378
BstDSI CCRYGG 1 cut(s) 1074
BstF5I GGATG 1 cut(s) 771
BstH2I RGCGCY 1 cut(s) 893
BstHHI GCGC 2 cut(s) 828, 892
BstKTI GATC 8 cut(s) 72, 105, 241, 535, 1165, 1237, 1315, 1408
BstMAI GTCTC 3 cut(s) 196, 1381, 1421
BstMBI GATC 8 cut(s) 69, 102, 238, 532, 1162, 1234, 1312, 1405
BstMWI GCNNNNNNNGC 2 cut(s) 832, 1145
BstNI CCWGG 1 cut(s) 1268
BstNSI RCATGY 1 cut(s) 304
BstPAI GACNNNNGTC 1 cut(s) 1083
BstSCI CCNGG 2 cut(s) 416, 1266
BstSFI CTRYAG 2 cut(s) 156, 1027
BstSLI GKGCMC 2 cut(s) 842, 1210
BstSNI TACGTA 1 cut(s) 1277
BstV1I GCAGC 2 cut(s) 720, 798
BstX2I RGATCY 3 cut(s) 532, 1162, 1405
BstYI RGATCY 3 cut(s) 532, 1162, 1405
Bsu15I ATCGAT 1 cut(s) 553
BsuRI GGCC 7 cut(s) 467, 513, 698, 705, 821, 857, 1090
BsuTUI ATCGAT 1 cut(s) 553
BtgI CCRYGG 1 cut(s) 1074
BtsCI GGATG 1 cut(s) 771
BtsI GCAGTG 1 cut(s) 642
BtsIMutI CAGTG 3 cut(s) 359, 514, 642
Cac8I GCNNGC 4 cut(s) 666, 859, 1092, 1206
CaiI CAGNNNCTG 1 cut(s) 1061
CciI TCATGA 1 cut(s) 1237
CfoI GCGC 2 cut(s) 828, 892
Cfr13I GGNCC 4 cut(s) 511, 819, 856, 1069
ClaI ATCGAT 1 cut(s) 553
Csp6I GTAC 6 cut(s) 231, 266, 572, 879, 1188, 1274
CviQI GTAC 6 cut(s) 231, 266, 572, 879, 1188, 1274
DdeI CTNAG 7 cut(s) 9, 225, 527, 627, 1223, 1290, 1378
DpnI GATC 8 cut(s) 71, 104, 240, 534, 1164, 1236, 1314, 1407
DpnII GATC 8 cut(s) 69, 102, 238, 532, 1162, 1234, 1312, 1405
DraI TTTAAA 1 cut(s) 1200
Eam1104I CTCTTC 2 cut(s) 1010, 1138
EarI CTCTTC 2 cut(s) 1010, 1138
EciI GGCGGA 1 cut(s) 683
Eco105I TACGTA 1 cut(s) 1277
Eco24I GRGCYC 1 cut(s) 226
Eco32I GATATC 1 cut(s) 202
Eco47I GGWCC 1 cut(s) 1069
Eco47III AGCGCT 1 cut(s) 891
EcoO109I RGGNCCY 1 cut(s) 1069
EcoRI GAATTC 1 cut(s) 289
EcoRII CCWGG 1 cut(s) 1266
EcoRV GATATC 1 cut(s) 202
EcoT22I ATGCAT 1 cut(s) 1441
EcoT38I GRGCYC 1 cut(s) 226
FaqI GGGAC 3 cut(s) 416, 433, 1082
FauI CCCGC 1 cut(s) 866
FbaI TGATCA 2 cut(s) 238, 1234
Fnu4HI GCNGC 3 cut(s) 731, 734, 812
FokI GGATG 1 cut(s) 778
FriOI GRGCYC 1 cut(s) 226
Fsp4HI GCNGC 3 cut(s) 731, 734, 812
FspBI CTAG 2 cut(s) 147, 800
GlaI GCGC 2 cut(s) 827, 891
GluI GCNGC 3 cut(s) 731, 734, 812
HaeII RGCGCY 1 cut(s) 893
HaeIII GGCC 7 cut(s) 467, 513, 698, 705, 821, 857, 1090
HapII CCGG 1 cut(s) 417
HhaI GCGC 2 cut(s) 828, 892
Hin6I GCGC 2 cut(s) 826, 890
HinP1I GCGC 2 cut(s) 826, 890
HincII GTYRAC 1 cut(s) 175
HindII GTYRAC 1 cut(s) 175
HindIII AAGCTT 1 cut(s) 644
HinfI GANTC 7 cut(s) 349, 550, 721, 871, 1105, 1330, 1355
HpaII CCGG 1 cut(s) 417
HphI GGTGA 7 cut(s) 139, 233, 362, 590, 880, 1114, 1394
Hpy166II GTNNAC 8 cut(s) 175, 233, 392, 522, 601, 760, 1078, 1190
Hpy188I TCNGA 7 cut(s) 10, 102, 138, 228, 295, 960, 1335
Hpy188III TCNNGA 5 cut(s) 147, 205, 1238, 1307, 1409
Hpy8I GTNNAC 8 cut(s) 175, 233, 392, 522, 601, 760, 1078, 1190
HpyAV CCTTC 5 cut(s) 401, 746, 859, 1311, 1357
HpyCH4III ACNGT 3 cut(s) 265, 396, 424
HpyCH4IV ACGT 3 cut(s) 708, 1192, 1276
HpyF10VI GCNNNNNNNGC 2 cut(s) 832, 1145
HpyF3I CTNAG 7 cut(s) 9, 225, 527, 627, 1223, 1290, 1378
HpySE526I ACGT 3 cut(s) 708, 1192, 1276
HspAI GCGC 2 cut(s) 826, 890
KflI GGGWCCC 1 cut(s) 1069
Ksp22I TGATCA 2 cut(s) 238, 1234
Kzo9I GATC 8 cut(s) 69, 102, 238, 532, 1162, 1234, 1312, 1405
LguI GCTCTTC 2 cut(s) 1010, 1138
LmnI GCTCC 1 cut(s) 419
Lsp1109I GCAGC 2 cut(s) 720, 798
LweI GCATC 2 cut(s) 756, 1231
MaeI CTAG 2 cut(s) 147, 800
MaeII ACGT 3 cut(s) 708, 1192, 1276
MaeIII GTNAC 6 cut(s) 127, 332, 444, 460, 1057, 1382
MalI GATC 8 cut(s) 71, 104, 240, 534, 1164, 1236, 1314, 1407
MboI GATC 8 cut(s) 69, 102, 238, 532, 1162, 1234, 1312, 1405
MboII GAAGA 3 cut(s) 52, 1027, 1155
MflI RGATCY 3 cut(s) 532, 1162, 1405
MhlI GDGCHC 3 cut(s) 226, 842, 1210
MluCI AATT 8 cut(s) 29, 250, 289, 477, 539, 677, 1350, 1369
MlyI GAGTC 2 cut(s) 358, 1324
Mph1103I ATGCAT 1 cut(s) 1441
MroXI GAANNNNTTC 1 cut(s) 756
MseI TTAA 3 cut(s) 476, 1007, 1199
MslI CAYNNNNRTG 2 cut(s) 866, 1225
MspI CCGG 1 cut(s) 417
MspR9I CCNGG 2 cut(s) 418, 1268
MvaI CCWGG 1 cut(s) 1268
MwoI GCNNNNNNNGC 2 cut(s) 832, 1145
NciI CCSGG 1 cut(s) 418
NdeII GATC 8 cut(s) 69, 102, 238, 532, 1162, 1234, 1312, 1405
NlaIV GGNNCC 7 cut(s) 512, 820, 841, 981, 1070, 1071, 1164
NmuCI GTSAC 4 cut(s) 127, 332, 444, 1382
NsiI ATGCAT 1 cut(s) 1441
NspI RCATGY 1 cut(s) 304
OliI CACNNNNGTG 1 cut(s) 1225
PagI TCATGA 1 cut(s) 1237
PciI ACATGT 1 cut(s) 300
PciSI GCTCTTC 2 cut(s) 1010, 1138
PcsI WCGNNNNNNNCGW 2 cut(s) 912, 1312
PdmI GAANNNNTTC 1 cut(s) 756
PfeI GAWTC 5 cut(s) 550, 721, 871, 1105, 1355
PfoI TCCNGGA 1 cut(s) 416
PkrI GCNGC 3 cut(s) 732, 735, 813
PleI GAGTC 2 cut(s) 357, 1324
PpsI GAGTC 2 cut(s) 357, 1324
Ppu21I YACGTR 1 cut(s) 1277
PpuMI RGGWCCY 1 cut(s) 1069
PscI ACATGT 1 cut(s) 300
PshAI GACNNNNGTC 1 cut(s) 1083
Psp5II RGGWCCY 1 cut(s) 1069
Psp6I CCWGG 1 cut(s) 1266
PspGI CCWGG 1 cut(s) 1266
PspN4I GGNNCC 7 cut(s) 512, 820, 841, 981, 1070, 1071, 1164
PspPI GGNCC 4 cut(s) 511, 819, 856, 1069
PspPPI RGGWCCY 1 cut(s) 1069
PstNI CAGNNNCTG 1 cut(s) 1061
PsuI RGATCY 3 cut(s) 532, 1162, 1405
RsaI GTAC 6 cut(s) 232, 267, 573, 880, 1189, 1275
RsaNI GTAC 6 cut(s) 231, 266, 572, 879, 1188, 1274
RseI CAYNNNNRTG 2 cut(s) 866, 1225
SapI GCTCTTC 2 cut(s) 1010, 1138
SaqAI TTAA 3 cut(s) 476, 1007, 1199
SatI GCNGC 3 cut(s) 731, 734, 812
Sau3AI GATC 8 cut(s) 69, 102, 238, 532, 1162, 1234, 1312, 1405
Sau96I GGNCC 4 cut(s) 511, 819, 856, 1069
SchI GAGTC 2 cut(s) 358, 1324
ScrFI CCNGG 2 cut(s) 418, 1268
SduI GDGCHC 3 cut(s) 226, 842, 1210
SfaNI GCATC 2 cut(s) 756, 1231
SfcI CTRYAG 2 cut(s) 156, 1027
SinI GGWCC 1 cut(s) 1069
SmiMI CAYNNNNRTG 2 cut(s) 866, 1225
SnaBI TACGTA 1 cut(s) 1277
Sse9I AATT 8 cut(s) 29, 250, 289, 477, 539, 677, 1350, 1369
SsiI CCGC 3 cut(s) 668, 730, 859
SspMI CTAG 2 cut(s) 147, 800
StyD4I CCNGG 2 cut(s) 416, 1266
TaaI ACNGT 3 cut(s) 265, 396, 424
TaiI ACGT 3 cut(s) 711, 1195, 1279
TaqI TCGA 3 cut(s) 553, 915, 1315
TasI AATT 8 cut(s) 29, 250, 289, 477, 539, 677, 1350, 1369
TatI WGTACW 4 cut(s) 230, 265, 571, 1187
TauI GCSGC 1 cut(s) 733
TfiI GAWTC 5 cut(s) 550, 721, 871, 1105, 1355
Tru1I TTAA 3 cut(s) 476, 1007, 1199
Tru9I TTAA 3 cut(s) 476, 1007, 1199
TscAI CASTG 3 cut(s) 359, 521, 642
TseFI GTSAC 4 cut(s) 127, 332, 444, 1382
TseI GCWGC 2 cut(s) 733, 811
Tsp45I GTSAC 4 cut(s) 127, 332, 444, 1382
TspDTI ATGAA 2 cut(s) 792, 878
TspRI CASTG 3 cut(s) 359, 521, 642
VpaK11BI GGWCC 1 cut(s) 1069
XapI RAATTY 3 cut(s) 289, 677, 1369
XbaI TCTAGA 1 cut(s) 146
XceI RCATGY 1 cut(s) 304
XmnI GAANNNNTTC 1 cut(s) 756
XspI CTAG 2 cut(s) 147, 800
Zsp2I ATGCAT 1 cut(s) 1441
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.