Autophagy protein Apg6
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G61710 AT3G61710 AT3G61710 AT3G61710 |
| fragaria_vesca | FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 |
| malus_domestica | MD01G1079900.v1.1 MD07G1148700.v1.1 |
| prunus_persica | Prupe.2G187200_v2.0.a1 |
| pyrus_communis | pycom01g10810 pycom07g14770 |
| rosa_chinensis | RchiOBHm_Chr1g0359341 |
| rosa_laevigata | RLG00000027878 |
| rosa_multiflora | Rmu_sc0013596.1_g000001 Rmu_sc0017222.1_g000001 Rmu_ssc0000332.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00297080 |
| rosa_rugosa | Rorug01G0270200 |
| rosa_samantha | Rh1AG283700 Rh1BG249900 Rh1CG267800 Rh1DG278800 |
| rosa_wichuraiana | Rw1G025190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 1134, 1391 |
| AccII | CGCG | 1 cut(s) | 276 |
| AciI | CCGC | 3 cut(s) | 150, 276, 1490 |
| AclWI | GGATC | 2 cut(s) | 41, 131 |
| AcoI | YGGCCR | 1 cut(s) | 1076 |
| AcsI | RAATTY | 3 cut(s) | 758, 953, 1252 |
| AcuI | CTGAAG | 2 cut(s) | 750, 767 |
| AcyI | GRCGYC | 2 cut(s) | 105, 281 |
| AfaI | GTAC | 4 cut(s) | 918, 961, 1196, 1505 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1411 |
| AjiI | CACGTC | 2 cut(s) | 269, 580 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1029, 1061 |
| AluBI | AGCT | 6 cut(s) | 179, 644, 701, 754, 1159, 1353 |
| AluI | AGCT | 6 cut(s) | 179, 644, 701, 754, 1159, 1353 |
| Alw21I | GWGCWC | 1 cut(s) | 1190 |
| Alw26I | GTCTC | 3 cut(s) | 396, 614, 1471 |
| AlwI | GGATC | 2 cut(s) | 41, 131 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1493 |
| AoxI | GGCC | 3 cut(s) | 403, 1033, 1076 |
| ApeKI | GCWGC | 2 cut(s) | 698, 1025 |
| ApoI | RAATTY | 3 cut(s) | 758, 953, 1252 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 200, 232, 1201, 1233 |
| AseI | ATTAAT | 1 cut(s) | 830 |
| AspS9I | GGNCC | 7 cut(s) | 403, 413, 1033, 1166, 1261, 1374, 1517 |
| AsuHPI | GGTGA | 2 cut(s) | 74, 279 |
| AvaII | GGWCC | 5 cut(s) | 413, 1166, 1261, 1374, 1517 |
| BanII | GRGCYC | 2 cut(s) | 164, 1417 |
| BauI | CACGAG | 1 cut(s) | 465 |
| BbsI | GAAGAC | 2 cut(s) | 991, 1037 |
| Bbv12I | GWGCWC | 1 cut(s) | 1190 |
| BbvCI | CCTCAGC | 1 cut(s) | 291 |
| BbvI | GCAGC | 2 cut(s) | 710, 1012 |
| BccI | CCATC | 6 cut(s) | 104, 316, 747, 846, 941, 1105 |
| BcoDI | GTCTC | 3 cut(s) | 396, 614, 1471 |
| BfaI | CTAG | 4 cut(s) | 483, 755, 1125, 1527 |
| BfmI | CTRYAG | 1 cut(s) | 702 |
| BisI | GCNGC | 3 cut(s) | 699, 1026, 1491 |
| BlsI | GCNGC | 3 cut(s) | 700, 1027, 1492 |
| Bme18I | GGWCC | 5 cut(s) | 413, 1166, 1261, 1374, 1517 |
| BmgBI | CACGTC | 2 cut(s) | 269, 580 |
| BmgT120I | GGNCC | 7 cut(s) | 403, 413, 1033, 1166, 1261, 1374, 1517 |
| BmiI | GGNNCC | 3 cut(s) | 415, 1034, 1498 |
| BmsI | GCATC | 3 cut(s) | 289, 844, 916 |
| BpiI | GAAGAC | 2 cut(s) | 991, 1037 |
| Bpu10I | CCTNAGC | 1 cut(s) | 291 |
| BpuEI | CTTGAG | 1 cut(s) | 638 |
| Bsa29I | ATCGAT | 1 cut(s) | 45 |
| BsaBI | GATNNNNATC | 1 cut(s) | 51 |
| BsaHI | GRCGYC | 2 cut(s) | 105, 281 |
| BsaI | GGTCTC | 1 cut(s) | 1471 |
| BsaJI | CCNNGG | 1 cut(s) | 172 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 317, 347 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1411 |
| Bse118I | RCCGGY | 1 cut(s) | 119 |
| Bse1I | ACTGG | 1 cut(s) | 1427 |
| Bse8I | GATNNNNATC | 1 cut(s) | 51 |
| BseCI | ATCGAT | 1 cut(s) | 45 |
| BseDI | CCNNGG | 1 cut(s) | 172 |
| BseGI | GGATG | 2 cut(s) | 571, 1018 |
| BseJI | GATNNNNATC | 1 cut(s) | 51 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1411 |
| BseMII | CTCAG | 4 cut(s) | 266, 305, 345, 503 |
| BseNI | ACTGG | 1 cut(s) | 1427 |
| BseRI | GAGGAG | 3 cut(s) | 26, 234, 1040 |
| BseXI | GCAGC | 2 cut(s) | 710, 1012 |
| Bsh1236I | CGCG | 1 cut(s) | 276 |
| Bsh1285I | CGRYCG | 1 cut(s) | 45 |
| BshFI | GGCC | 3 cut(s) | 405, 1035, 1078 |
| BshVI | ATCGAT | 1 cut(s) | 45 |
| BsiEI | CGRYCG | 1 cut(s) | 45 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1190 |
| BsiSI | CCGG | 2 cut(s) | 120, 1075 |
| BslFI | GGGAC | 2 cut(s) | 399, 590 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1411 |
| BsmAI | GTCTC | 3 cut(s) | 396, 614, 1471 |
| BsmBI | CGTCTC | 1 cut(s) | 614 |
| BsmFI | GGGAC | 2 cut(s) | 399, 590 |
| BsmI | GAATGC | 2 cut(s) | 258, 527 |
| BsnI | GGCC | 3 cut(s) | 405, 1035, 1078 |
| Bso31I | GGTCTC | 1 cut(s) | 1471 |
| Bsp1286I | GDGCHC | 3 cut(s) | 164, 1190, 1417 |
| Bsp143I | GATC | 6 cut(s) | 42, 46, 136, 790, 1017, 1311 |
| Bsp19I | CCATGG | 1 cut(s) | 172 |
| BspACI | CCGC | 3 cut(s) | 150, 276, 1490 |
| BspANI | GGCC | 3 cut(s) | 405, 1035, 1078 |
| BspCNI | CTCAG | 4 cut(s) | 265, 304, 346, 502 |
| BspDI | ATCGAT | 1 cut(s) | 45 |
| BspFNI | CGCG | 1 cut(s) | 276 |
| BspLI | GGNNCC | 3 cut(s) | 415, 1034, 1498 |
| BspPI | GGATC | 2 cut(s) | 41, 131 |
| BspTNI | GGTCTC | 1 cut(s) | 1471 |
| BsrFI | RCCGGY | 1 cut(s) | 119 |
| BsrI | ACTGG | 1 cut(s) | 1427 |
| BssAI | RCCGGY | 1 cut(s) | 119 |
| BssECI | CCNNGG | 1 cut(s) | 172 |
| BssMI | GATC | 6 cut(s) | 42, 46, 136, 790, 1017, 1311 |
| BssNAI | GTATAC | 1 cut(s) | 1392 |
| BssNI | GRCGYC | 2 cut(s) | 105, 281 |
| BssSI | CACGAG | 1 cut(s) | 465 |
| BssT1I | CCWWGG | 1 cut(s) | 172 |
| Bst1107I | GTATAC | 1 cut(s) | 1392 |
| Bst2BI | CACGAG | 1 cut(s) | 465 |
| Bst4CI | ACNGT | 5 cut(s) | 80, 185, 413, 1215, 1465 |
| Bst6I | CTCTTC | 1 cut(s) | 840 |
| BstACI | GRCGYC | 2 cut(s) | 105, 281 |
| BstC8I | GCNNGC | 2 cut(s) | 121, 598 |
| BstDEI | CTNAG | 7 cut(s) | 252, 291, 354, 489, 517, 635, 1551 |
| BstDSI | CCRYGG | 1 cut(s) | 172 |
| BstF5I | GGATG | 2 cut(s) | 571, 1018 |
| BstFNI | CGCG | 1 cut(s) | 276 |
| BstKTI | GATC | 6 cut(s) | 45, 49, 139, 793, 1020, 1314 |
| BstMAI | GTCTC | 3 cut(s) | 396, 614, 1471 |
| BstMBI | GATC | 6 cut(s) | 42, 46, 136, 790, 1017, 1311 |
| BstMCI | CGRYCG | 1 cut(s) | 45 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 522, 593, 863, 1247 |
| BstNSI | RCATGY | 1 cut(s) | 600 |
| BstSFI | CTRYAG | 1 cut(s) | 702 |
| BstUI | CGCG | 1 cut(s) | 276 |
| BstV1I | GCAGC | 2 cut(s) | 710, 1012 |
| BstV2I | GAAGAC | 2 cut(s) | 991, 1037 |
| BstZ17I | GTATAC | 1 cut(s) | 1392 |
| Bsu15I | ATCGAT | 1 cut(s) | 45 |
| BsuRI | GGCC | 3 cut(s) | 405, 1035, 1078 |
| BsuTUI | ATCGAT | 1 cut(s) | 45 |
| BtgI | CCRYGG | 1 cut(s) | 172 |
| BtgZI | GCGATG | 1 cut(s) | 335 |
| BtrI | CACGTC | 2 cut(s) | 269, 580 |
| BtsCI | GGATG | 2 cut(s) | 571, 1018 |
| BtsIMutI | CAGTG | 2 cut(s) | 190, 1211 |
| Cac8I | GCNNGC | 2 cut(s) | 121, 598 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1493 |
| Cfr10I | RCCGGY | 1 cut(s) | 119 |
| Cfr13I | GGNCC | 7 cut(s) | 403, 413, 1033, 1166, 1261, 1374, 1517 |
| ClaI | ATCGAT | 1 cut(s) | 45 |
| CseI | GACGC | 3 cut(s) | 94, 270, 631 |
| Csp6I | GTAC | 4 cut(s) | 917, 960, 1195, 1504 |
| CviAII | CATG | 6 cut(s) | 173, 205, 526, 597, 1207, 1539 |
| CviQI | GTAC | 4 cut(s) | 917, 960, 1195, 1504 |
| DdeI | CTNAG | 7 cut(s) | 252, 291, 354, 489, 517, 635, 1551 |
| DpnI | GATC | 6 cut(s) | 44, 48, 138, 792, 1019, 1313 |
| DpnII | GATC | 6 cut(s) | 42, 46, 136, 790, 1017, 1311 |
| EaeI | YGGCCR | 1 cut(s) | 1076 |
| Eam1104I | CTCTTC | 1 cut(s) | 840 |
| EarI | CTCTTC | 1 cut(s) | 840 |
| Eco130I | CCWWGG | 1 cut(s) | 172 |
| Eco24I | GRGCYC | 2 cut(s) | 164, 1417 |
| Eco31I | GGTCTC | 1 cut(s) | 1471 |
| Eco47I | GGWCC | 5 cut(s) | 413, 1166, 1261, 1374, 1517 |
| Eco57I | CTGAAG | 2 cut(s) | 750, 767 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1517 |
| EcoRI | GAATTC | 1 cut(s) | 758 |
| EcoT14I | CCWWGG | 1 cut(s) | 172 |
| EcoT22I | ATGCAT | 1 cut(s) | 527 |
| EcoT38I | GRGCYC | 2 cut(s) | 164, 1417 |
| ErhI | CCWWGG | 1 cut(s) | 172 |
| Esp3I | CGTCTC | 1 cut(s) | 614 |
| FaeI | CATG | 6 cut(s) | 176, 208, 529, 600, 1210, 1542 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 618, 650, 1029, 1061 |
| FaqI | GGGAC | 2 cut(s) | 399, 590 |
| FatI | CATG | 6 cut(s) | 172, 204, 525, 596, 1206, 1538 |
| FauI | CCCGC | 1 cut(s) | 269 |
| FblI | GTMKAC | 2 cut(s) | 1134, 1391 |
| Fnu4HI | GCNGC | 3 cut(s) | 699, 1026, 1491 |
| FokI | GGATG | 2 cut(s) | 578, 1025 |
| FriOI | GRGCYC | 2 cut(s) | 164, 1417 |
| Fsp4HI | GCNGC | 3 cut(s) | 699, 1026, 1491 |
| FspBI | CTAG | 4 cut(s) | 483, 755, 1125, 1527 |
| GluI | GCNGC | 3 cut(s) | 699, 1026, 1491 |
| HaeIII | GGCC | 3 cut(s) | 405, 1035, 1078 |
| HapII | CCGG | 2 cut(s) | 120, 1075 |
| HgaI | GACGC | 3 cut(s) | 94, 270, 631 |
| Hin1I | GRCGYC | 2 cut(s) | 105, 281 |
| Hin1II | CATG | 6 cut(s) | 176, 208, 529, 600, 1210, 1542 |
| HincII | GTYRAC | 1 cut(s) | 1174 |
| HindII | GTYRAC | 1 cut(s) | 1174 |
| HinfI | GANTC | 7 cut(s) | 16, 52, 110, 329, 368, 987, 1523 |
| HpaI | GTTAAC | 1 cut(s) | 1174 |
| HpaII | CCGG | 2 cut(s) | 120, 1075 |
| HphI | GGTGA | 2 cut(s) | 74, 279 |
| Hpy166II | GTNNAC | 4 cut(s) | 736, 1135, 1174, 1392 |
| Hpy188I | TCNGA | 7 cut(s) | 33, 51, 355, 367, 492, 541, 606 |
| Hpy188III | TCNNGA | 6 cut(s) | 20, 40, 312, 395, 842, 1520 |
| Hpy8I | GTNNAC | 4 cut(s) | 736, 1135, 1174, 1392 |
| Hpy99I | CGWCG | 3 cut(s) | 104, 110, 1465 |
| HpyAV | CCTTC | 6 cut(s) | 608, 742, 940, 1310, 1485, 1545 |
| HpyCH4III | ACNGT | 5 cut(s) | 80, 185, 413, 1215, 1465 |
| HpyCH4IV | ACGT | 2 cut(s) | 268, 579 |
| HpyCH4V | TGCA | 5 cut(s) | 525, 698, 857, 1250, 1401 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 522, 593, 863, 1247 |
| HpyF3I | CTNAG | 7 cut(s) | 252, 291, 354, 489, 517, 635, 1551 |
| HpySE526I | ACGT | 2 cut(s) | 268, 579 |
| Hsp92I | GRCGYC | 2 cut(s) | 105, 281 |
| Hsp92II | CATG | 6 cut(s) | 176, 208, 529, 600, 1210, 1542 |
| KroI | GCCGGC | 1 cut(s) | 119 |
| KroNI | GCCGGC | 1 cut(s) | 121 |
| KspAI | GTTAAC | 1 cut(s) | 1174 |
| Kzo9I | GATC | 6 cut(s) | 42, 46, 136, 790, 1017, 1311 |
| LmnI | GCTCC | 3 cut(s) | 176, 751, 1185 |
| Lsp1109I | GCAGC | 2 cut(s) | 710, 1012 |
| LweI | GCATC | 3 cut(s) | 289, 844, 916 |
| MaeI | CTAG | 4 cut(s) | 483, 755, 1125, 1527 |
| MaeII | ACGT | 2 cut(s) | 268, 579 |
| MaeIII | GTNAC | 3 cut(s) | 80, 568, 1064 |
| MalI | GATC | 6 cut(s) | 44, 48, 138, 792, 1019, 1313 |
| MboI | GATC | 6 cut(s) | 42, 46, 136, 790, 1017, 1311 |
| MhlI | GDGCHC | 3 cut(s) | 164, 1190, 1417 |
| MlyI | GAGTC | 2 cut(s) | 981, 1517 |
| MmeI | TCCRAC | 4 cut(s) | 11, 1352, 1411, 1471 |
| Mph1103I | ATGCAT | 1 cut(s) | 527 |
| MroNI | GCCGGC | 1 cut(s) | 119 |
| MseI | TTAA | 9 cut(s) | 441, 461, 777, 830, 902, 966, 1098, 1173, 1230 |
| MspA1I | CMGCKG | 1 cut(s) | 1490 |
| MspI | CCGG | 2 cut(s) | 120, 1075 |
| Mva1269I | GAATGC | 2 cut(s) | 258, 527 |
| MvnI | CGCG | 1 cut(s) | 276 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 522, 593, 863, 1247 |
| NaeI | GCCGGC | 1 cut(s) | 121 |
| NcoI | CCATGG | 1 cut(s) | 172 |
| NdeII | GATC | 6 cut(s) | 42, 46, 136, 790, 1017, 1311 |
| NgoMIV | GCCGGC | 1 cut(s) | 119 |
| NlaIII | CATG | 6 cut(s) | 176, 208, 529, 600, 1210, 1542 |
| NlaIV | GGNNCC | 3 cut(s) | 415, 1034, 1498 |
| NmuCI | GTSAC | 2 cut(s) | 80, 568 |
| NsiI | ATGCAT | 1 cut(s) | 527 |
| NspI | RCATGY | 1 cut(s) | 600 |
| PaeI | GCATGC | 1 cut(s) | 600 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 105, 597 |
| PctI | GAATGC | 2 cut(s) | 258, 527 |
| PdiI | GCCGGC | 1 cut(s) | 121 |
| PfeI | GAWTC | 5 cut(s) | 16, 52, 110, 329, 368 |
| PkrI | GCNGC | 3 cut(s) | 700, 1027, 1492 |
| Ple19I | CGATCG | 1 cut(s) | 45 |
| PleI | GAGTC | 2 cut(s) | 981, 1517 |
| PpsI | GAGTC | 2 cut(s) | 981, 1517 |
| PpuMI | RGGWCCY | 1 cut(s) | 1517 |
| PshBI | ATTAAT | 1 cut(s) | 830 |
| Psp5II | RGGWCCY | 1 cut(s) | 1517 |
| PspN4I | GGNNCC | 3 cut(s) | 415, 1034, 1498 |
| PspPI | GGNCC | 7 cut(s) | 403, 413, 1033, 1166, 1261, 1374, 1517 |
| PspPPI | RGGWCCY | 1 cut(s) | 1517 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1493 |
| PvuI | CGATCG | 1 cut(s) | 45 |
| RsaI | GTAC | 4 cut(s) | 918, 961, 1196, 1505 |
| RsaNI | GTAC | 4 cut(s) | 917, 960, 1195, 1504 |
| SaqAI | TTAA | 9 cut(s) | 441, 461, 777, 830, 902, 966, 1098, 1173, 1230 |
| SatI | GCNGC | 3 cut(s) | 699, 1026, 1491 |
| Sau3AI | GATC | 6 cut(s) | 42, 46, 136, 790, 1017, 1311 |
| Sau96I | GGNCC | 7 cut(s) | 403, 413, 1033, 1166, 1261, 1374, 1517 |
| SchI | GAGTC | 2 cut(s) | 981, 1517 |
| SduI | GDGCHC | 3 cut(s) | 164, 1190, 1417 |
| SfaNI | GCATC | 3 cut(s) | 289, 844, 916 |
| SfcI | CTRYAG | 1 cut(s) | 702 |
| SinI | GGWCC | 5 cut(s) | 413, 1166, 1261, 1374, 1517 |
| SmlI | CTYRAG | 1 cut(s) | 653 |
| SmoI | CTYRAG | 1 cut(s) | 653 |
| SphI | GCATGC | 1 cut(s) | 600 |
| SsiI | CCGC | 3 cut(s) | 150, 276, 1490 |
| SspI | AATATT | 1 cut(s) | 1276 |
| SspMI | CTAG | 4 cut(s) | 483, 755, 1125, 1527 |
| StyI | CCWWGG | 1 cut(s) | 172 |
| TaaI | ACNGT | 5 cut(s) | 80, 185, 413, 1215, 1465 |
| TaiI | ACGT | 2 cut(s) | 271, 582 |
| TaqI | TCGA | 6 cut(s) | 45, 108, 232, 561, 976, 1314 |
| TatI | WGTACW | 1 cut(s) | 916 |
| TauI | GCSGC | 1 cut(s) | 1493 |
| TfiI | GAWTC | 5 cut(s) | 16, 52, 110, 329, 368 |
| Tru1I | TTAA | 9 cut(s) | 441, 461, 777, 830, 902, 966, 1098, 1173, 1230 |
| Tru9I | TTAA | 9 cut(s) | 441, 461, 777, 830, 902, 966, 1098, 1173, 1230 |
| TscAI | CASTG | 2 cut(s) | 190, 1218 |
| TseFI | GTSAC | 2 cut(s) | 80, 568 |
| TseI | GCWGC | 2 cut(s) | 698, 1025 |
| Tsp45I | GTSAC | 2 cut(s) | 80, 568 |
| TspDTI | ATGAA | 1 cut(s) | 1527 |
| TspGWI | ACGGA | 2 cut(s) | 135, 955 |
| TspRI | CASTG | 2 cut(s) | 190, 1218 |
| VpaK11BI | GGWCC | 5 cut(s) | 413, 1166, 1261, 1374, 1517 |
| VspI | ATTAAT | 1 cut(s) | 830 |
| XapI | RAATTY | 3 cut(s) | 758, 953, 1252 |
| XceI | RCATGY | 1 cut(s) | 600 |
| XmiI | GTMKAC | 2 cut(s) | 1134, 1391 |
| XspI | CTAG | 4 cut(s) | 483, 755, 1125, 1527 |
| Zsp2I | ATGCAT | 1 cut(s) | 527 |