Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005026

Physical Location & Seq

Genomic Coordinates Reverse (-)

51341185 .. 51345292

Gene Structure 4108 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ58440

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGGGTGAAAAGGGTCGGAGCTTTCCGGTGGATCCGAGTGTGCCCCGATGGGTCTGCCAGAATTGCCGCCACAACCTTTGCATCGTCGGCGCCGATTCCTACGCCGACAAGTTCTTCAGCGATTTCTCTCGTTCTGGCATGCAGGGCTCTTCGATGCATGGGGCGAGCAGTGTGCTGGCATCGAAGATGGACAATTCGTTTGTTGTGTTACCGCCAAGACCTCAGGCACAGGGAGTCCCTCCTCGTCCTCGTGCTGGAGCAGGCAATGCAAGCCAGGCTGGGAAGGCAATGGATGAGTCCTTTGTGGTTGTTTATAAATCTGAGTCCTCGGTGGATGGCGGTGGGGCCCAATTGCCGTCACCAGATGGAGGTCCTAATGGTCCTTTACAACCTAACAATTCTGGGTTTCACTCAACTATAACTCTCCTGAAACGGGCATTTGAAATTGCCACCACGCAAACACAAGTTGAGCAACCTTTATGCCTTGAATGCATGAAGGTATTGTCTGATAAACTTGACAAGGAGGTGGAAGATGTGAATAGAGACATTACGGCATACGAGTCATGTCTTAAACGGTTGGAGGGTGAAACAAGGGAAGTTCTAAGTGAGGCTGATTTTCTCAAGGAAAAGCTAAAGATTGAGGAAGAAGAGAGAAAACTCGAAGCAGCAATTGCAGAAATGGAGAAACAGAATACAGAAGTTAATGCTGAACTGAAGGAACTTGACTTAAAATCTGGGCGATTTAAGGAATTAGAGGAGCGGTACTGGCACGAGTTCAACACTTTCCAGTTTCAATTGATTTCAAATCAGGAAGAGAGAGATGCAATTTTGGCCAAGATTGAAGTTTCGCAGGCACATTTAGAGTTGTTGAAACGAACTAATGTGCTCAATGATGCCTTTCCTATCTGGCATGATGGAGAATTTGGAACCATTAACAATTTTCGGCTTGGACGACTTCCTAAAATTCCGGTCGAATGGGATGAGATAAATGCTGCCTGGGGTCAAGCCTGCCTTCTCCTCCATACAATGTGTCAATACTTCCGGCCAAAATTTCAATATCGAATTAAAATACTTCCTATGGGTAGCTACCCTCGGATTATGGACAGCAACAACAATACTTATGAATTGTTTGGTCCAGTGAACTTGTTTTGGAGCACTCGTTATGACAAAGCAATGACACTGTTCTTGACATGCCTTAAGGAGTTTGCTGAGTTTGCAAATTCCAAGGACCAAGAAAACAACATACCACCTGAAAAATGTTTTAAATTGCCCTACAAAATTGAGAATGATAAGGTGGAAAGCTATTCTATCACTCAGAGCTTCAATAAGCAGGAGAATTGGACCAAAGCTCTCAAGTACACCCTCTGCAATTTGAAATGGGCTCTGTATTGGTTTGTTGGAAATACAAACTTCCAGCCTCTTTCTGCACTTGTGTCTTCACATTCTGAAGTTCCAGGTGTGAGCTCTTTGTACACAAGACGTGGTAACGACTCCAAGTTGGAGTTCCGAAACTCATCACCCATGACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000045 GO:0000407 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005942 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0006914 GO:0006950 GO:0006952 GO:0006995 GO:0006996 GO:0007033 GO:0007034 GO:0007154 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009267 GO:0009605 GO:0009607 GO:0009620 GO:0009846 GO:0009856 GO:0009987 GO:0009991 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016236 GO:0019898 GO:0022414 GO:0022607 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031982 GO:0032501 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034271 GO:0034272 GO:0034613 GO:0035032 GO:0042594 GO:0042886 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043562 GO:0044085 GO:0044237 GO:0044248 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044706 GO:0044804 GO:0045184 GO:0045324 GO:0046907 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051704 GO:0051707 GO:0051716 GO:0061695 GO:0061919 GO:0070727 GO:0070925 GO:0071496 GO:0071702 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098542 GO:0098796 GO:1902494 GO:1905037 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04136 ko04137 ko04138 ko04140 ko04215 ko04371 ko05167 map04136 map04137 map04138 map04140 map04215 map04371 map05167

Pfam Domains

Protein Families

APG6

Protein Analysis

509

Amino Acids

57.84

Weight (kDa)

5.71

Isoelectric Point (pI)

39.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
APG6_N	PF17675	159 - 287	2.7e-27	Apg6 coiled-coil region
APG6	PF04111	290 - 465	6.3e-62	Apg6 BARA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005026)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61710 AT3G61710 AT3G61710 AT3G61710
fragaria_vesca	FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330
malus_domestica	MD01G1079900.v1.1 MD07G1148700.v1.1
prunus_persica	Prupe.2G187200_v2.0.a1
pyrus_communis	pycom01g10810 pycom07g14770
rosa_chinensis	RchiOBHm_Chr1g0359341
rosa_laevigata	RLG00000027878
rosa_multiflora	Rmu_sc0013596.1_g000001 Rmu_sc0017222.1_g000001 Rmu_ssc0000332.1_g000001
rosa_roxburghii	Rroxscaffold_4G00297080
rosa_rugosa	Rorug01G0270200
rosa_samantha	Rh1AG283700 Rh1BG249900 Rh1CG267800 Rh1DG278800
rosa_wichuraiana	Rw1G025190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	315
AccB1I	GGYRCC	1 cut(s)	89
AccBSI	CCGCTC	1 cut(s)	760
AciI	CCGC	4 cut(s)	67, 212, 339, 760
AclWI	GGATC	2 cut(s)	26, 39
AcoI	YGGCCR	2 cut(s)	831, 1043
AcsI	RAATTY	4 cut(s)	920, 963, 1049, 1219
AcuI	CTGAAG	3 cut(s)	100, 734, 1467
AcyI	GRCGYC	1 cut(s)	90
AfaI	GTAC	3 cut(s)	764, 1358, 1472
AfiI	CCNNNNNNNGG	3 cut(s)	254, 368, 433
AflII	CTTAAG	1 cut(s)	1196
AjiI	CACGTC	1 cut(s)	1481
AjnI	CCWGG	3 cut(s)	273, 995, 1453
AjuI	GAANNNNNNNTTGG	2 cut(s)	1487, 1519
AluBI	AGCT	7 cut(s)	21, 631, 1086, 1302, 1320, 1349, 1464
AluI	AGCT	7 cut(s)	21, 631, 1086, 1302, 1320, 1349, 1464
Alw21I	GWGCWC	3 cut(s)	888, 1157, 1466
Alw26I	GTCTC	1 cut(s)	537
AlwI	GGATC	2 cut(s)	26, 39
AoxI	GGCC	3 cut(s)	345, 831, 1043
ApaI	GGGCCC	1 cut(s)	349
ApeKI	GCWGC	2 cut(s)	665, 992
ApoI	RAATTY	4 cut(s)	920, 963, 1049, 1219
ArsI	GACNNNNNNTTYG	2 cut(s)	182, 214
AspLEI	GCGC	1 cut(s)	92
AspS9I	GGNCC	7 cut(s)	345, 346, 371, 380, 1133, 1228, 1341
AsuHPI	GGTGA	4 cut(s)	17, 351, 596, 1509
AvaII	GGWCC	5 cut(s)	371, 380, 1133, 1228, 1341
AxyI	CCTNAGG	1 cut(s)	222
BaeGI	GKGCMC	2 cut(s)	45, 349
BalI	TGGCCA	1 cut(s)	833
BamHI	GGATCC	1 cut(s)	31
BanI	GGYRCC	1 cut(s)	89
BanII	GRGCYC	4 cut(s)	149, 349, 1384, 1466
BauI	CACGAG	2 cut(s)	249, 770
BbsI	GAAGAC	1 cut(s)	1428
Bbv12I	GWGCWC	3 cut(s)	888, 1157, 1466
BbvI	GCAGC	2 cut(s)	677, 979
BccI	CCATC	5 cut(s)	42, 181, 329, 359, 908
BceAI	ACGGC	2 cut(s)	340, 567
BcgI	CGANNNNNNTGC	4 cut(s)	36, 70, 154, 188
BciT130I	CCWGG	3 cut(s)	275, 997, 1455
BcoDI	GTCTC	1 cut(s)	537
BfoI	RGCGCY	1 cut(s)	93
BfrI	CTTAAG	1 cut(s)	1196
BisI	GCNGC	3 cut(s)	67, 666, 993
BlsI	GCNGC	3 cut(s)	68, 667, 994
Bme1390I	CCNGG	3 cut(s)	275, 997, 1455
Bme18I	GGWCC	5 cut(s)	371, 380, 1133, 1228, 1341
BmgBI	CACGTC	1 cut(s)	1481
BmgT120I	GGNCC	7 cut(s)	345, 346, 371, 380, 1133, 1228, 1341
BmiI	GGNNCC	5 cut(s)	33, 91, 346, 347, 928
BmrFI	CCNGG	3 cut(s)	275, 997, 1455
BmsI	GCATC	5 cut(s)	90, 144, 188, 811, 883
BpiI	GAAGAC	1 cut(s)	1428
BpmI	CTGGAG	1 cut(s)	276
BpuEI	CTTGAG	2 cut(s)	605, 1337
BsaHI	GRCGYC	1 cut(s)	90
BsaJI	CCNNGG	4 cut(s)	327, 996, 1091, 1224
BsaWI	WCCGGW	2 cut(s)	25, 967
BsaXI	ACNNNNNCTCC	2 cut(s)	1144, 1174
Bsc4I	CCNNNNNNNGG	3 cut(s)	254, 368, 433
Bse1I	ACTGG	3 cut(s)	770, 787, 1136
Bse21I	CCTNAGG	1 cut(s)	222
Bse3DI	GCAATG	3 cut(s)	271, 294, 1179
BseBI	CCWGG	3 cut(s)	275, 997, 1455
BseDI	CCNNGG	4 cut(s)	327, 996, 1091, 1224
BseGI	GGATG	3 cut(s)	298, 340, 985
BseLI	CCNNNNNNNGG	3 cut(s)	254, 368, 433
BseMI	GCAATG	3 cut(s)	271, 294, 1179
BseMII	CTCAG	4 cut(s)	236, 312, 1200, 1328
BseNI	ACTGG	3 cut(s)	770, 787, 1136
BseRI	GAGGAG	3 cut(s)	231, 770, 1007
BseSI	GKGCMC	2 cut(s)	45, 349
BseXI	GCAGC	2 cut(s)	677, 979
BseYI	CCCAGC	1 cut(s)	278
BsgI	GTGCAG	1 cut(s)	1410
Bsh1285I	CGRYCG	1 cut(s)	972
BshFI	GGCC	3 cut(s)	347, 833, 1045
BshNI	GGYRCC	1 cut(s)	89
BsiEI	CGRYCG	1 cut(s)	972
BsiHKAI	GWGCWC	3 cut(s)	888, 1157, 1466
BsiSI	CCGG	3 cut(s)	26, 968, 1042
BslFI	GGGAC	1 cut(s)	221
BslI	CCNNNNNNNGG	3 cut(s)	254, 368, 433
BsmAI	GTCTC	1 cut(s)	537
BsmFI	GGGAC	1 cut(s)	221
BsmI	GAATGC	1 cut(s)	494
BsnI	GGCC	3 cut(s)	347, 833, 1045
Bsp120I	GGGCCC	1 cut(s)	345
Bsp1286I	GDGCHC	7 cut(s)	45, 149, 349, 888, 1157, 1384, 1466
Bsp1407I	TGTACA	1 cut(s)	1470
Bsp143I	GATC	1 cut(s)	31
BspACI	CCGC	4 cut(s)	67, 212, 339, 760
BspANI	GGCC	3 cut(s)	347, 833, 1045
BspCNI	CTCAG	4 cut(s)	235, 313, 1201, 1327
BspLI	GGNNCC	5 cut(s)	33, 91, 346, 347, 928
BspPI	GGATC	2 cut(s)	26, 39
BspQI	GCTCTTC	1 cut(s)	154
BspT107I	GGYRCC	1 cut(s)	89
BspTI	CTTAAG	1 cut(s)	1196
BsrBI	CCGCTC	1 cut(s)	760
BsrDI	GCAATG	3 cut(s)	271, 294, 1179
BsrGI	TGTACA	1 cut(s)	1470
BsrI	ACTGG	3 cut(s)	770, 787, 1136
BssECI	CCNNGG	4 cut(s)	327, 996, 1091, 1224
BssMI	GATC	1 cut(s)	31
BssNI	GRCGYC	1 cut(s)	90
BssSI	CACGAG	2 cut(s)	249, 770
BssT1I	CCWWGG	1 cut(s)	1224
Bst2BI	CACGAG	2 cut(s)	249, 770
Bst2UI	CCWGG	3 cut(s)	275, 997, 1455
Bst4CI	ACNGT	2 cut(s)	576, 1182
Bst6I	CTCTTC	3 cut(s)	154, 642, 807
BstACI	GRCGYC	1 cut(s)	90
BstAFI	CTTAAG	1 cut(s)	1196
BstAPI	GCANNNNNTGC	2 cut(s)	266, 671
BstAUI	TGTACA	1 cut(s)	1470
BstC8I	GCNNGC	7 cut(s)	140, 166, 177, 262, 271, 852, 1009
BstDEI	CTNAG	5 cut(s)	222, 321, 602, 1209, 1314
BstF5I	GGATG	3 cut(s)	298, 340, 985
BstH2I	RGCGCY	1 cut(s)	93
BstHHI	GCGC	1 cut(s)	92
BstKTI	GATC	1 cut(s)	34
BstMAI	GTCTC	1 cut(s)	537
BstMBI	GATC	1 cut(s)	31
BstMCI	CGRYCG	1 cut(s)	972
BstNI	CCWGG	3 cut(s)	275, 997, 1455
BstNSI	RCATGY	2 cut(s)	142, 1194
BstSCI	CCNGG	3 cut(s)	273, 995, 1453
BstSLI	GKGCMC	2 cut(s)	45, 349
BstV1I	GCAGC	2 cut(s)	677, 979
BstV2I	GAAGAC	1 cut(s)	1428
BstX2I	RGATCY	1 cut(s)	31
BstYI	RGATCY	1 cut(s)	31
Bsu36I	CCTNAGG	1 cut(s)	222
BsuRI	GGCC	3 cut(s)	347, 833, 1045
BtrI	CACGTC	1 cut(s)	1481
BtsCI	GGATG	3 cut(s)	298, 340, 985
BtsI	GCAGTG	1 cut(s)	175
BtsIMutI	CAGTG	3 cut(s)	175, 1143, 1178
Cac8I	GCNNGC	7 cut(s)	140, 166, 177, 262, 271, 852, 1009
CfoI	GCGC	1 cut(s)	92
Cfr13I	GGNCC	7 cut(s)	345, 346, 371, 380, 1133, 1228, 1341
Csp6I	GTAC	3 cut(s)	763, 1357, 1471
CspCI	CAANNNNNGTGG	2 cut(s)	59, 94
CviAII	CATG	7 cut(s)	139, 158, 493, 564, 911, 1191, 1522
CviQI	GTAC	3 cut(s)	763, 1357, 1471
DdeI	CTNAG	5 cut(s)	222, 321, 602, 1209, 1314
DinI	GGCGCC	1 cut(s)	91
DpnI	GATC	1 cut(s)	33
DpnII	GATC	1 cut(s)	31
DraI	TTTAAA	1 cut(s)	1264
EaeI	YGGCCR	2 cut(s)	831, 1043
Eam1104I	CTCTTC	3 cut(s)	154, 642, 807
EarI	CTCTTC	3 cut(s)	154, 642, 807
Ecl136II	GAGCTC	1 cut(s)	1464
Eco130I	CCWWGG	1 cut(s)	1224
Eco24I	GRGCYC	4 cut(s)	149, 349, 1384, 1466
Eco47I	GGWCC	5 cut(s)	371, 380, 1133, 1228, 1341
Eco53kI	GAGCTC	1 cut(s)	1464
Eco57I	CTGAAG	3 cut(s)	100, 734, 1467
Eco81I	CCTNAGG	1 cut(s)	222
EcoICRI	GAGCTC	1 cut(s)	1464
EcoO109I	RGGNCCY	2 cut(s)	345, 371
EcoRII	CCWGG	3 cut(s)	273, 995, 1453
EcoT14I	CCWWGG	1 cut(s)	1224
EcoT22I	ATGCAT	2 cut(s)	159, 494
EcoT38I	GRGCYC	4 cut(s)	149, 349, 1384, 1466
EgeI	GGCGCC	1 cut(s)	91
EheI	GGCGCC	1 cut(s)	91
ErhI	CCWWGG	1 cut(s)	1224
FaeI	CATG	7 cut(s)	142, 161, 496, 567, 914, 1194, 1525
FalI	AAGNNNNNCTT	2 cut(s)	996, 1028
FaqI	GGGAC	1 cut(s)	221
FatI	CATG	7 cut(s)	138, 157, 492, 563, 910, 1190, 1521
Fnu4HI	GCNGC	3 cut(s)	67, 666, 993
FokI	GGATG	3 cut(s)	305, 347, 992
FriOI	GRGCYC	4 cut(s)	149, 349, 1384, 1466
Fsp4HI	GCNGC	3 cut(s)	67, 666, 993
GlaI	GCGC	1 cut(s)	91
GluI	GCNGC	3 cut(s)	67, 666, 993
GsaI	CCCAGC	1 cut(s)	282
GsuI	CTGGAG	1 cut(s)	276
HaeII	RGCGCY	1 cut(s)	93
HaeIII	GGCC	3 cut(s)	347, 833, 1045
HapII	CCGG	3 cut(s)	26, 968, 1042
HhaI	GCGC	1 cut(s)	92
Hin1I	GRCGYC	1 cut(s)	90
Hin1II	CATG	7 cut(s)	142, 161, 496, 567, 914, 1194, 1525
Hin6I	GCGC	1 cut(s)	90
HinP1I	GCGC	1 cut(s)	90
HinfI	GANTC	6 cut(s)	95, 234, 296, 323, 560, 1490
HpaII	CCGG	3 cut(s)	26, 968, 1042
HphI	GGTGA	4 cut(s)	17, 351, 596, 1509
Hpy166II	GTNNAC	3 cut(s)	1141, 1359, 1473
Hpy188I	TCNGA	8 cut(s)	18, 36, 322, 508, 1095, 1317, 1447, 1508
Hpy188III	TCNNGA	3 cut(s)	427, 809, 1186
Hpy8I	GTNNAC	3 cut(s)	1141, 1359, 1473
Hpy99I	CGWCG	1 cut(s)	89
HpyAV	CCTTC	4 cut(s)	277, 490, 709, 1022
HpyCH4III	ACNGT	2 cut(s)	576, 1182
HpyCH4IV	ACGT	1 cut(s)	1480
HpyF3I	CTNAG	5 cut(s)	222, 321, 602, 1209, 1314
HpySE526I	ACGT	1 cut(s)	1480
Hsp92I	GRCGYC	1 cut(s)	90
Hsp92II	CATG	7 cut(s)	142, 161, 496, 567, 914, 1194, 1525
HspAI	GCGC	1 cut(s)	90
KasI	GGCGCC	1 cut(s)	89
Kzo9I	GATC	1 cut(s)	31
LguI	GCTCTTC	1 cut(s)	154
LmnI	GCTCC	4 cut(s)	18, 257, 757, 1152
Lsp1109I	GCAGC	2 cut(s)	677, 979
LweI	GCATC	5 cut(s)	90, 144, 188, 811, 883
MaeII	ACGT	1 cut(s)	1480
MaeIII	GTNAC	3 cut(s)	207, 357, 1484
MalI	GATC	1 cut(s)	33
MbiI	CCGCTC	1 cut(s)	760
MboI	GATC	1 cut(s)	31
MboII	GAAGA	8 cut(s)	106, 141, 196, 542, 656, 659, 824, 1428
MfeI	CAATTG	3 cut(s)	350, 669, 794
MflI	RGATCY	1 cut(s)	31
MhlI	GDGCHC	7 cut(s)	45, 149, 349, 888, 1157, 1384, 1466
MlsI	TGGCCA	1 cut(s)	833
MluNI	TGGCCA	1 cut(s)	833
Mly113I	GGCGCC	1 cut(s)	90
MlyI	GAGTC	5 cut(s)	243, 305, 332, 569, 1484
MmeI	TCCRAC	3 cut(s)	558, 1378, 1479
Mox20I	TGGCCA	1 cut(s)	833
Mph1103I	ATGCAT	2 cut(s)	159, 494
MscI	TGGCCA	1 cut(s)	833
MseI	TTAA	8 cut(s)	570, 702, 728, 744, 933, 1065, 1197, 1263
Msp20I	TGGCCA	1 cut(s)	833
MspCI	CTTAAG	1 cut(s)	1196
MspI	CCGG	3 cut(s)	26, 968, 1042
MspR9I	CCNGG	3 cut(s)	275, 997, 1455
MunI	CAATTG	3 cut(s)	350, 669, 794
Mva1269I	GAATGC	1 cut(s)	494
MvaI	CCWGG	3 cut(s)	275, 997, 1455
NarI	GGCGCC	1 cut(s)	90
NdeII	GATC	1 cut(s)	31
NlaIII	CATG	7 cut(s)	142, 161, 496, 567, 914, 1194, 1525
NlaIV	GGNNCC	5 cut(s)	33, 91, 346, 347, 928
NmuCI	GTSAC	1 cut(s)	357
NsiI	ATGCAT	2 cut(s)	159, 494
NspI	RCATGY	2 cut(s)	142, 1194
PaeI	GCATGC	1 cut(s)	142
PciSI	GCTCTTC	1 cut(s)	154
PcsI	WCGNNNNNNNCGW	2 cut(s)	90, 949
PctI	GAATGC	1 cut(s)	494
PfeI	GAWTC	1 cut(s)	95
PkrI	GCNGC	3 cut(s)	68, 667, 994
PleI	GAGTC	5 cut(s)	242, 304, 331, 568, 1484
PluTI	GGCGCC	1 cut(s)	93
PpsI	GAGTC	5 cut(s)	242, 304, 331, 568, 1484
PpuMI	RGGWCCY	1 cut(s)	371
PsiI	TTATAA	1 cut(s)	315
Psp124BI	GAGCTC	1 cut(s)	1466
Psp5II	RGGWCCY	1 cut(s)	371
Psp6I	CCWGG	3 cut(s)	273, 995, 1453
PspFI	CCCAGC	1 cut(s)	278
PspGI	CCWGG	3 cut(s)	273, 995, 1453
PspN4I	GGNNCC	5 cut(s)	33, 91, 346, 347, 928
PspOMI	GGGCCC	1 cut(s)	345
PspPI	GGNCC	7 cut(s)	345, 346, 371, 380, 1133, 1228, 1341
PspPPI	RGGWCCY	1 cut(s)	371
PsuI	RGATCY	1 cut(s)	31
RsaI	GTAC	3 cut(s)	764, 1358, 1472
RsaNI	GTAC	3 cut(s)	763, 1357, 1471
SacI	GAGCTC	1 cut(s)	1466
SapI	GCTCTTC	1 cut(s)	154
SaqAI	TTAA	8 cut(s)	570, 702, 728, 744, 933, 1065, 1197, 1263
SatI	GCNGC	3 cut(s)	67, 666, 993
Sau3AI	GATC	1 cut(s)	31
Sau96I	GGNCC	7 cut(s)	345, 346, 371, 380, 1133, 1228, 1341
SchI	GAGTC	5 cut(s)	243, 305, 332, 569, 1484
ScrFI	CCNGG	3 cut(s)	275, 997, 1455
SduI	GDGCHC	7 cut(s)	45, 149, 349, 888, 1157, 1384, 1466
SfaNI	GCATC	5 cut(s)	90, 144, 188, 811, 883
SfoI	GGCGCC	1 cut(s)	91
SinI	GGWCC	5 cut(s)	371, 380, 1133, 1228, 1341
SmlI	CTYRAG	3 cut(s)	620, 1196, 1352
SmoI	CTYRAG	3 cut(s)	620, 1196, 1352
SphI	GCATGC	1 cut(s)	142
SsiI	CCGC	4 cut(s)	67, 212, 339, 760
SspDI	GGCGCC	1 cut(s)	89
SstI	GAGCTC	1 cut(s)	1466
StyD4I	CCNGG	3 cut(s)	273, 995, 1453
StyI	CCWWGG	1 cut(s)	1224
TaaI	ACNGT	2 cut(s)	576, 1182
TaiI	ACGT	1 cut(s)	1483
TaqI	TCGA	5 cut(s)	152, 182, 660, 972, 1060
TatI	WGTACW	2 cut(s)	1356, 1470
TauI	GCSGC	1 cut(s)	69
TfiI	GAWTC	1 cut(s)	95
Tru1I	TTAA	8 cut(s)	570, 702, 728, 744, 933, 1065, 1197, 1263
Tru9I	TTAA	8 cut(s)	570, 702, 728, 744, 933, 1065, 1197, 1263
TscAI	CASTG	3 cut(s)	175, 1143, 1185
TseFI	GTSAC	1 cut(s)	357
TseI	GCWGC	2 cut(s)	665, 992
Tsp45I	GTSAC	1 cut(s)	357
TspDTI	ATGAA	2 cut(s)	509, 1137
TspRI	CASTG	3 cut(s)	175, 1143, 1185
Vha464I	CTTAAG	1 cut(s)	1196
VpaK11BI	GGWCC	5 cut(s)	371, 380, 1133, 1228, 1341
XapI	RAATTY	4 cut(s)	920, 963, 1049, 1219
XceI	RCATGY	2 cut(s)	142, 1194
Zsp2I	ATGCAT	2 cut(s)	159, 494

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.