Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0005026

Physical Location & Seq

Genomic Coordinates Reverse (-)

21719199 .. 21731601

Gene Structure 12403 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1148700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGAATCAAAATCACAAAGAAACAAACAAACCAGACCACGACTGTTATGATCTCTCTTCAGCCAAGAAACAAAGAGAAATAAACTTTGTCTCCTCTCATACGAATCCAAGAGCCTTCCACTCCCATAAGGATTTAATGGGCGAAAGGGGTCGGAGCTTCACGGTGGATCCGAACGTCCCCAGATATGTCTGCCAGAACTGCCGCAACTCTCTCTGCGTCGTCGGCGCCGATTCCTACGCCGAAAAGTTCTTCCACGATTTCTCTCGCTCCGGTATGCAGGGCTCTTCAATGCATGGGGCGACCAGTGTGTTATCATCAATGCGGATGGACAATTCTTTTGTTGTATTACCGCAGCAAAGAGCACAAGGAGTCCCTCCACGTCCCCGTGGTGGAGCAGTCAATACAGGCCATTCTGGAAACGCAATGGATGAGTCCTTTGTGGTTGTTAATAAATCTGAGTCCTCAGCGGATGGTGGTGGGGCTCATTTGCCGTCACCTGATGGAGGACCCAATGGTCCTTTGCAGCCTAACAATTCTGGCTTTCACTCTACTATATCTCTCCTGAAACGGGCATTTGAAATTGCGAGCACCCAAACACAGGTCGAGCAACCTTTATGCGTTGAATGCATGAGGGTATTGTCTGATAAACTTGACAAGGAGGTAGAAGATGTCAATAGGGACATTAAAGCATATGAAGCCTGTCTTAAACGCTTGGAGGGTGAGACAAGGGAAGTGCTTAGCGAGACTGATTTTCTCAAGGAAAAACTAAAGATTGAGGAAGAAGAGAGAAAACTTGAAGCGGCAATTGAAGAGATGGAGAAACAGAATGCAGAAGTAAATAATGAACTGAAGGAACTTGAGTTAAAATCTAGCAGATTTAAGGAGTTGGAGGAGCGGTACTGGCACGAGTTCAATAATTTTCAGTTTCAATTAATTTCAAATCAGGAAGAAAGAGATGCAATTTTGGCCAAGATAGAAGTTTCACAAGCACACTTGGAGTTGTTGAAACGAACTAATGTGCTCAATGATGCCTTTCCTATTTGGCATGATGGAGAATTTGGTACCATTAACAATTTTCGACTTGGACGACTTCCTAAAATTCCGGTTGAGTGGGATGAGATAAATGCTGCATGGGGTCAAGCCTGCCTTCTTCTCCATACAATGTGTCAGTATTTCCGGCCAAAGTTTCAGTATCGAATAAAAATACTTCCTATGGGCAGCTACCCTCGGATTATGGACAACAATAACAATACTTATGAGCTGTTTGGTCCGGTGAACTTGTTCTGGAGCACTCGATATGACAAAGCAATGACATTGTTCTTGACATGCCTCAAGGACTTTGCTGAATTTGCGAATTCCAAGGACCAAGAAAACAACATACCACCTGAAAAACGCTTTAAATTGCCCTACAAGATTGAGAATGACAAAGTGGAAACCTATTCGATCACTCAAAGCTTCAATAAGCAGGAGAATTGGACCAAAGCTCTCAAGTACACCCTCTGCAATTTGAAATGGGCTCTGTATTGGTTTGTTGGGAACACAAACTTCCAGCCCCTTTCCGCAGTAGTGTCGTCTTCACATGCTGAAGTCTCAGGTGTAGGCTCTTTGTACTCGAGACGCAGTACCGACTCCAAGTCTGAGTTCCAAAACTCATCGCTTCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000045 GO:0000407 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005942 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0006914 GO:0006950 GO:0006952 GO:0006995 GO:0006996 GO:0007033 GO:0007034 GO:0007154 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009267 GO:0009605 GO:0009607 GO:0009620 GO:0009846 GO:0009856 GO:0009987 GO:0009991 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016236 GO:0019898 GO:0022414 GO:0022607 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031982 GO:0032501 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034271 GO:0034272 GO:0034613 GO:0035032 GO:0042594 GO:0042886 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043562 GO:0044085 GO:0044237 GO:0044248 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044706 GO:0044804 GO:0045184 GO:0045324 GO:0046907 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051704 GO:0051707 GO:0051716 GO:0061695 GO:0061919 GO:0070727 GO:0070925 GO:0071496 GO:0071702 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098542 GO:0098796 GO:1902494 GO:1905037 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04136 ko04137 ko04138 ko04140 ko04215 ko04371 ko05167 map04136 map04137 map04138 map04140 map04215 map04371 map05167

Pfam Domains

Protein Families

APG6

Protein Analysis

555

Amino Acids

63.34

Weight (kDa)

6.07

Isoelectric Point (pI)

37.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
APG6_N	PF17675	204 - 332	5.4e-29	Apg6 coiled-coil region
APG6	PF04111	335 - 510	7.8e-62	Apg6 BARA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005026)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61710 AT3G61710 AT3G61710 AT3G61710
fragaria_vesca	FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330
malus_domestica	MD01G1079900.v1.1 MD07G1148700.v1.1
prunus_persica	Prupe.2G187200_v2.0.a1
pyrus_communis	pycom01g10810 pycom07g14770
rosa_chinensis	RchiOBHm_Chr1g0359341
rosa_laevigata	RLG00000027878
rosa_multiflora	Rmu_sc0013596.1_g000001 Rmu_sc0017222.1_g000001 Rmu_ssc0000332.1_g000001
rosa_roxburghii	Rroxscaffold_4G00297080
rosa_rugosa	Rorug01G0270200
rosa_samantha	Rh1AG283700 Rh1BG249900 Rh1CG267800 Rh1DG278800
rosa_wichuraiana	Rw1G025190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	513
Acc65I	GGTACC	1 cut(s)	1061
AccB1I	GGYRCC	2 cut(s)	224, 1061
AccBSI	CCGCTC	1 cut(s)	895
AciI	CCGC	7 cut(s)	202, 322, 350, 467, 800, 895, 1560
AclWI	GGATC	2 cut(s)	161, 174
AcoI	YGGCCR	2 cut(s)	966, 1178
AcsI	RAATTY	4 cut(s)	1055, 1098, 1346, 1354
AcuI	CTGAAG	3 cut(s)	42, 869, 1605
AcyI	GRCGYC	1 cut(s)	225
AfaI	GTAC	5 cut(s)	899, 1063, 1493, 1610, 1624
AfiI	CCNNNNNNNGG	4 cut(s)	389, 503, 568, 598
AhdI	GACNNNNNGTC	1 cut(s)	1633
AjiI	CACGTC	1 cut(s)	380
AjuI	GAANNNNNNNTTGG	2 cut(s)	1625, 1657
AluBI	AGCT	5 cut(s)	156, 1221, 1261, 1455, 1484
AluI	AGCT	5 cut(s)	156, 1221, 1261, 1455, 1484
Alw21I	GWGCWC	4 cut(s)	364, 590, 1023, 1292
Alw26I	GTCTC	5 cut(s)	94, 716, 737, 1594, 1609
AlwI	GGATC	2 cut(s)	161, 174
Ama87I	CYCGRG	1 cut(s)	1612
AoxI	GGCC	3 cut(s)	406, 966, 1178
ApeKI	GCWGC	4 cut(s)	352, 523, 1127, 1218
ApoI	RAATTY	4 cut(s)	1055, 1098, 1346, 1354
ArsI	GACNNNNNNTTYG	2 cut(s)	320, 352
AseI	ATTAAT	1 cut(s)	932
Asp700I	GAANNNNTTC	1 cut(s)	1280
Asp718I	GGTACC	1 cut(s)	1061
AspLEI	GCGC	1 cut(s)	227
AspS9I	GGNCC	5 cut(s)	506, 515, 1268, 1363, 1476
AsuHPI	GGTGA	3 cut(s)	486, 731, 1285
AvaI	CYCGRG	1 cut(s)	1612
AvaII	GGWCC	5 cut(s)	506, 515, 1268, 1363, 1476
BalI	TGGCCA	1 cut(s)	968
BamHI	GGATCC	1 cut(s)	166
BanI	GGYRCC	2 cut(s)	224, 1061
BanII	GRGCYC	3 cut(s)	284, 484, 1519
BauI	CACGAG	1 cut(s)	905
BbsI	GAAGAC	1 cut(s)	1566
Bbv12I	GWGCWC	4 cut(s)	364, 590, 1023, 1292
BbvCI	CCTCAGC	1 cut(s)	463
BbvI	GCAGC	4 cut(s)	364, 535, 1114, 1230
BccI	CCATC	5 cut(s)	319, 464, 494, 808, 1043
BceAI	ACGGC	1 cut(s)	475
BcgI	CGANNNNNNTGC	2 cut(s)	1551, 1585
BcoDI	GTCTC	5 cut(s)	94, 716, 737, 1594, 1609
BfaI	CTAG	1 cut(s)	870
BfoI	RGCGCY	1 cut(s)	228
BisI	GCNGC	6 cut(s)	202, 353, 524, 801, 1128, 1219
BlpI	GCTNAGC	1 cut(s)	737
BlsI	GCNGC	6 cut(s)	203, 354, 525, 802, 1129, 1220
Bme18I	GGWCC	5 cut(s)	506, 515, 1268, 1363, 1476
BmeRI	GACNNNNNGTC	1 cut(s)	1633
BmeT110I	CYCGRG	1 cut(s)	1612
BmgBI	CACGTC	1 cut(s)	380
BmgT120I	GGNCC	5 cut(s)	506, 515, 1268, 1363, 1476
BmiI	GGNNCC	4 cut(s)	168, 226, 508, 1063
BmsI	GCATC	2 cut(s)	946, 1018
BpiI	GAAGAC	1 cut(s)	1566
BpmI	CTGGAG	1 cut(s)	1306
Bpu10I	CCTNAGC	1 cut(s)	463
Bpu1102I	GCTNAGC	1 cut(s)	737
BpuEI	CTTGAG	4 cut(s)	740, 878, 1316, 1472
BsaHI	GRCGYC	1 cut(s)	225
BsaJI	CCNNGG	3 cut(s)	385, 1226, 1359
BsaWI	WCCGGW	3 cut(s)	269, 1102, 1270
BsaXI	ACNNNNNCTCC	4 cut(s)	74, 104, 881, 911
Bsc4I	CCNNNNNNNGG	4 cut(s)	389, 503, 568, 598
Bse1I	ACTGG	2 cut(s)	303, 905
Bse3DI	GCAATG	2 cut(s)	429, 1314
BseDI	CCNNGG	3 cut(s)	385, 1226, 1359
BseGI	GGATG	4 cut(s)	330, 433, 475, 1120
BseLI	CCNNNNNNNGG	4 cut(s)	389, 503, 568, 598
BseMI	GCAATG	2 cut(s)	429, 1314
BseMII	CTCAG	4 cut(s)	447, 477, 1605, 1629
BseNI	ACTGG	2 cut(s)	303, 905
BseRI	GAGGAG	2 cut(s)	82, 905
BseXI	GCAGC	4 cut(s)	364, 535, 1114, 1230
BshFI	GGCC	3 cut(s)	408, 968, 1180
BshNI	GGYRCC	2 cut(s)	224, 1061
BsiHKAI	GWGCWC	4 cut(s)	364, 590, 1023, 1292
BsiHKCI	CYCGRG	1 cut(s)	1612
BsiSI	CCGG	4 cut(s)	270, 1103, 1177, 1271
BslFI	GGGAC	4 cut(s)	161, 356, 366, 692
BslI	CCNNNNNNNGG	4 cut(s)	389, 503, 568, 598
BsmAI	GTCTC	5 cut(s)	94, 716, 737, 1594, 1609
BsmBI	CGTCTC	1 cut(s)	1609
BsmFI	GGGAC	4 cut(s)	161, 356, 366, 692
BsmI	GAATGC	2 cut(s)	629, 832
BsnI	GGCC	3 cut(s)	408, 968, 1180
BsoBI	CYCGRG	1 cut(s)	1612
Bsp1286I	GDGCHC	7 cut(s)	284, 364, 484, 590, 1023, 1292, 1519
Bsp143I	GATC	3 cut(s)	49, 166, 1443
Bsp1720I	GCTNAGC	1 cut(s)	737
BspACI	CCGC	7 cut(s)	202, 322, 350, 467, 800, 895, 1560
BspANI	GGCC	3 cut(s)	408, 968, 1180
BspCNI	CTCAG	4 cut(s)	448, 476, 1604, 1630
BspLI	GGNNCC	4 cut(s)	168, 226, 508, 1063
BspPI	GGATC	2 cut(s)	161, 174
BspQI	GCTCTTC	1 cut(s)	289
BspT107I	GGYRCC	2 cut(s)	224, 1061
BsrBI	CCGCTC	1 cut(s)	895
BsrDI	GCAATG	2 cut(s)	429, 1314
BsrI	ACTGG	2 cut(s)	303, 905
BssECI	CCNNGG	3 cut(s)	385, 1226, 1359
BssMI	GATC	3 cut(s)	49, 166, 1443
BssNI	GRCGYC	1 cut(s)	225
BssSI	CACGAG	1 cut(s)	905
BssT1I	CCWWGG	1 cut(s)	1359
Bst2BI	CACGAG	1 cut(s)	905
Bst4CI	ACNGT	2 cut(s)	44, 163
Bst6I	CTCTTC	4 cut(s)	61, 289, 777, 804
BstACI	GRCGYC	1 cut(s)	225
BstC8I	GCNNGC	2 cut(s)	586, 1144
BstDEI	CTNAG	5 cut(s)	456, 463, 737, 1591, 1638
BstDSI	CCRYGG	1 cut(s)	385
BstENI	CCTNNNNNAGG	1 cut(s)	501
BstF5I	GGATG	4 cut(s)	330, 433, 475, 1120
BstH2I	RGCGCY	1 cut(s)	228
BstHHI	GCGC	1 cut(s)	227
BstKTI	GATC	3 cut(s)	52, 169, 1446
BstMAI	GTCTC	5 cut(s)	94, 716, 737, 1594, 1609
BstMBI	GATC	3 cut(s)	49, 166, 1443
BstMWI	GCNNNNNNNGC	7 cut(s)	198, 222, 624, 695, 901, 965, 1349
BstNSI	RCATGY	2 cut(s)	1329, 1583
BstV1I	GCAGC	4 cut(s)	364, 535, 1114, 1230
BstV2I	GAAGAC	1 cut(s)	1566
BstX2I	RGATCY	1 cut(s)	166
BstYI	RGATCY	1 cut(s)	166
BsuRI	GGCC	3 cut(s)	408, 968, 1180
BtgI	CCRYGG	1 cut(s)	385
BtgZI	GCGATG	1 cut(s)	1638
BtrI	CACGTC	1 cut(s)	380
BtsCI	GGATG	4 cut(s)	330, 433, 475, 1120
BtsIMutI	CAGTG	1 cut(s)	310
Cac8I	GCNNGC	2 cut(s)	586, 1144
CfoI	GCGC	1 cut(s)	227
Cfr13I	GGNCC	5 cut(s)	506, 515, 1268, 1363, 1476
CseI	GACGC	2 cut(s)	205, 1626
Csp6I	GTAC	5 cut(s)	898, 1062, 1492, 1609, 1623
CviAII	CATG	7 cut(s)	293, 628, 1046, 1131, 1326, 1580, 1662
CviQI	GTAC	5 cut(s)	898, 1062, 1492, 1609, 1623
DdeI	CTNAG	5 cut(s)	456, 463, 737, 1591, 1638
DinI	GGCGCC	1 cut(s)	226
DpnI	GATC	3 cut(s)	51, 168, 1445
DpnII	GATC	3 cut(s)	49, 166, 1443
DraI	TTTAAA	1 cut(s)	1399
DrdI	GACNNNNNNGTC	1 cut(s)	513
DriI	GACNNNNNGTC	1 cut(s)	1633
DseDI	GACNNNNNNGTC	1 cut(s)	513
EaeI	YGGCCR	2 cut(s)	966, 1178
Eam1104I	CTCTTC	4 cut(s)	61, 289, 777, 804
Eam1105I	GACNNNNNGTC	1 cut(s)	1633
EarI	CTCTTC	4 cut(s)	61, 289, 777, 804
Eco130I	CCWWGG	1 cut(s)	1359
Eco24I	GRGCYC	3 cut(s)	284, 484, 1519
Eco47I	GGWCC	5 cut(s)	506, 515, 1268, 1363, 1476
Eco57I	CTGAAG	3 cut(s)	42, 869, 1605
Eco88I	CYCGRG	1 cut(s)	1612
EcoNI	CCTNNNNNAGG	1 cut(s)	501
EcoO109I	RGGNCCY	1 cut(s)	506
EcoRI	GAATTC	1 cut(s)	1354
EcoT14I	CCWWGG	1 cut(s)	1359
EcoT22I	ATGCAT	2 cut(s)	294, 629
EcoT38I	GRGCYC	3 cut(s)	284, 484, 1519
EgeI	GGCGCC	1 cut(s)	226
EheI	GGCGCC	1 cut(s)	226
ErhI	CCWWGG	1 cut(s)	1359
Esp3I	CGTCTC	1 cut(s)	1609
FaeI	CATG	7 cut(s)	296, 631, 1049, 1134, 1329, 1583, 1665
FalI	AAGNNNNNCTT	4 cut(s)	687, 719, 1131, 1163
FaqI	GGGAC	4 cut(s)	161, 356, 366, 692
FatI	CATG	7 cut(s)	292, 627, 1045, 1130, 1325, 1579, 1661
FauNDI	CATATG	1 cut(s)	691
Fnu4HI	GCNGC	6 cut(s)	202, 353, 524, 801, 1128, 1219
FokI	GGATG	4 cut(s)	337, 440, 482, 1127
FriOI	GRGCYC	3 cut(s)	284, 484, 1519
Fsp4HI	GCNGC	6 cut(s)	202, 353, 524, 801, 1128, 1219
FspBI	CTAG	1 cut(s)	870
GlaI	GCGC	1 cut(s)	226
GluI	GCNGC	6 cut(s)	202, 353, 524, 801, 1128, 1219
GsuI	CTGGAG	1 cut(s)	1306
HaeII	RGCGCY	1 cut(s)	228
HaeIII	GGCC	3 cut(s)	408, 968, 1180
HapII	CCGG	4 cut(s)	270, 1103, 1177, 1271
HgaI	GACGC	2 cut(s)	205, 1626
HhaI	GCGC	1 cut(s)	227
Hin1I	GRCGYC	1 cut(s)	225
Hin1II	CATG	7 cut(s)	296, 631, 1049, 1134, 1329, 1583, 1665
Hin6I	GCGC	1 cut(s)	225
HinP1I	GCGC	1 cut(s)	225
HindIII	AAGCTT	1 cut(s)	1453
HinfI	GANTC	7 cut(s)	4, 103, 230, 369, 431, 458, 1628
HpaII	CCGG	4 cut(s)	270, 1103, 1177, 1271
HphI	GGTGA	3 cut(s)	486, 731, 1285
Hpy166II	GTNNAC	2 cut(s)	1276, 1494
Hpy188I	TCNGA	6 cut(s)	153, 171, 457, 643, 1230, 1639
Hpy188III	TCNNGA	6 cut(s)	414, 562, 944, 1285, 1321, 1614
Hpy8I	GTNNAC	2 cut(s)	1276, 1494
Hpy99I	CGWCG	2 cut(s)	221, 224
HpyAV	CCTTC	3 cut(s)	124, 844, 1157
HpyCH4III	ACNGT	2 cut(s)	44, 163
HpyCH4IV	ACGT	2 cut(s)	174, 379
HpyCH4V	TGCA	8 cut(s)	277, 292, 523, 627, 830, 959, 1130, 1503
HpyF10VI	GCNNNNNNNGC	7 cut(s)	198, 222, 624, 695, 901, 965, 1349
HpyF3I	CTNAG	5 cut(s)	456, 463, 737, 1591, 1638
HpySE526I	ACGT	2 cut(s)	174, 379
Hsp92I	GRCGYC	1 cut(s)	225
Hsp92II	CATG	7 cut(s)	296, 631, 1049, 1134, 1329, 1583, 1665
HspAI	GCGC	1 cut(s)	225
KasI	GGCGCC	1 cut(s)	224
KpnI	GGTACC	1 cut(s)	1065
Kzo9I	GATC	3 cut(s)	49, 166, 1443
LguI	GCTCTTC	1 cut(s)	289
LmnI	GCTCC	5 cut(s)	153, 272, 392, 892, 1287
Lsp1109I	GCAGC	4 cut(s)	364, 535, 1114, 1230
LweI	GCATC	2 cut(s)	946, 1018
MaeI	CTAG	1 cut(s)	870
MaeII	ACGT	2 cut(s)	174, 379
MaeIII	GTNAC	1 cut(s)	492
MalI	GATC	3 cut(s)	51, 168, 1445
MbiI	CCGCTC	1 cut(s)	895
MboI	GATC	3 cut(s)	49, 166, 1443
MfeI	CAATTG	1 cut(s)	804
MflI	RGATCY	1 cut(s)	166
MhlI	GDGCHC	7 cut(s)	284, 364, 484, 590, 1023, 1292, 1519
MlsI	TGGCCA	1 cut(s)	968
MluNI	TGGCCA	1 cut(s)	968
Mly113I	GGCGCC	1 cut(s)	225
MlyI	GAGTC	4 cut(s)	378, 440, 467, 1622
MmeI	TCCRAC	2 cut(s)	131, 867
Mox20I	TGGCCA	1 cut(s)	968
Mph1103I	ATGCAT	2 cut(s)	294, 629
MroXI	GAANNNNTTC	1 cut(s)	1280
MscI	TGGCCA	1 cut(s)	968
MseI	TTAA	9 cut(s)	134, 447, 684, 705, 863, 879, 932, 1068, 1398
Msp20I	TGGCCA	1 cut(s)	968
MspA1I	CMGCKG	1 cut(s)	467
MspI	CCGG	4 cut(s)	270, 1103, 1177, 1271
MunI	CAATTG	1 cut(s)	804
Mva1269I	GAATGC	2 cut(s)	629, 832
MwoI	GCNNNNNNNGC	7 cut(s)	198, 222, 624, 695, 901, 965, 1349
NarI	GGCGCC	1 cut(s)	225
NdeI	CATATG	1 cut(s)	691
NdeII	GATC	3 cut(s)	49, 166, 1443
NlaIII	CATG	7 cut(s)	296, 631, 1049, 1134, 1329, 1583, 1665
NlaIV	GGNNCC	4 cut(s)	168, 226, 508, 1063
NmuCI	GTSAC	1 cut(s)	492
NsiI	ATGCAT	2 cut(s)	294, 629
NspI	RCATGY	2 cut(s)	1329, 1583
PaeR7I	CTCGAG	1 cut(s)	1612
PciSI	GCTCTTC	1 cut(s)	289
PcsI	WCGNNNNNNNCGW	3 cut(s)	167, 225, 1084
PctI	GAATGC	2 cut(s)	629, 832
PdmI	GAANNNNTTC	1 cut(s)	1280
PfeI	GAWTC	3 cut(s)	4, 103, 230
PkrI	GCNGC	6 cut(s)	203, 354, 525, 802, 1129, 1220
PleI	GAGTC	4 cut(s)	377, 439, 466, 1622
PluTI	GGCGCC	1 cut(s)	228
PpsI	GAGTC	4 cut(s)	377, 439, 466, 1622
PpuMI	RGGWCCY	1 cut(s)	506
PshBI	ATTAAT	1 cut(s)	932
Psp5II	RGGWCCY	1 cut(s)	506
PspN4I	GGNNCC	4 cut(s)	168, 226, 508, 1063
PspPI	GGNCC	5 cut(s)	506, 515, 1268, 1363, 1476
PspPPI	RGGWCCY	1 cut(s)	506
PsuI	RGATCY	1 cut(s)	166
RsaI	GTAC	5 cut(s)	899, 1063, 1493, 1610, 1624
RsaNI	GTAC	5 cut(s)	898, 1062, 1492, 1609, 1623
SapI	GCTCTTC	1 cut(s)	289
SaqAI	TTAA	9 cut(s)	134, 447, 684, 705, 863, 879, 932, 1068, 1398
SatI	GCNGC	6 cut(s)	202, 353, 524, 801, 1128, 1219
Sau3AI	GATC	3 cut(s)	49, 166, 1443
Sau96I	GGNCC	5 cut(s)	506, 515, 1268, 1363, 1476
SchI	GAGTC	4 cut(s)	378, 440, 467, 1622
SduI	GDGCHC	7 cut(s)	284, 364, 484, 590, 1023, 1292, 1519
SfaNI	GCATC	2 cut(s)	946, 1018
SfoI	GGCGCC	1 cut(s)	226
Sfr274I	CTCGAG	1 cut(s)	1612
SinI	GGWCC	5 cut(s)	506, 515, 1268, 1363, 1476
SlaI	CTCGAG	1 cut(s)	1612
SmlI	CTYRAG	5 cut(s)	755, 857, 1331, 1487, 1612
SmoI	CTYRAG	5 cut(s)	755, 857, 1331, 1487, 1612
SsiI	CCGC	7 cut(s)	202, 322, 350, 467, 800, 895, 1560
SspDI	GGCGCC	1 cut(s)	224
SspMI	CTAG	1 cut(s)	870
StyI	CCWWGG	1 cut(s)	1359
TaaI	ACNGT	2 cut(s)	44, 163
TaiI	ACGT	2 cut(s)	177, 382
TaqI	TCGA	6 cut(s)	603, 1078, 1195, 1294, 1442, 1613
TatI	WGTACW	2 cut(s)	1491, 1608
TauI	GCSGC	2 cut(s)	204, 803
TfiI	GAWTC	3 cut(s)	4, 103, 230
Tru1I	TTAA	9 cut(s)	134, 447, 684, 705, 863, 879, 932, 1068, 1398
Tru9I	TTAA	9 cut(s)	134, 447, 684, 705, 863, 879, 932, 1068, 1398
TscAI	CASTG	1 cut(s)	310
TseFI	GTSAC	1 cut(s)	492
TseI	GCWGC	4 cut(s)	352, 523, 1127, 1218
Tsp45I	GTSAC	1 cut(s)	492
TspDTI	ATGAA	3 cut(s)	17, 708, 858
TspRI	CASTG	1 cut(s)	310
VpaK11BI	GGWCC	5 cut(s)	506, 515, 1268, 1363, 1476
VspI	ATTAAT	1 cut(s)	932
XagI	CCTNNNNNAGG	1 cut(s)	501
XapI	RAATTY	4 cut(s)	1055, 1098, 1346, 1354
XceI	RCATGY	2 cut(s)	1329, 1583
XhoI	CTCGAG	1 cut(s)	1612
XmnI	GAANNNNTTC	1 cut(s)	1280
XspI	CTAG	1 cut(s)	870
Zsp2I	ATGCAT	2 cut(s)	294, 629

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.