Prupe.2G187200_v2.0.a1

Beclin-1-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
22793076 .. 22797500
4425 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G187200.1

Sequence Viewer

Length: 1527 bp
ATGGGAGAAAGGGGTCGGGGCTTTCAGGTGGATCCGAATTTGCCCAGATATGTCTGCCAGAACTGCCGCAACTCTCTCTGCATCGTCGGCGCCGATTCCTATGCCGAAAAGTTCTTCAACGATTTCTCTCGCTCCGGCATGCAGGGCTCTTCAATGCATGGGGCAAACAGTGTGTTATCAACACGGATGGACAATTCTTTTGTTGTGTTACCAAAGCAAAGACCCCAGGCACAAGGAGTCCCTCCTCGTCCCCGTGTTGGAGCCGCCCAAACAAGCCAGTCTGGAAAGGCAATGGATGAGTCCTTTGTGGTTGTTTATAAATCTGAGTCATCAGCAGATGGTGGTGGGGCCCAGTTGCCGTCGCCTGATGGAGGACCCAATGGTCCTTTGCAGCCTAACAATTCTGGGTTTCACTCTACTATAACTCTCCTGAAACGGGCATTTGAAATTGCCACCACCCAAACACAAGTTGAGCAACCTTTATGTCTTGAATGCATGAGGGTAGTGTCTGATAAACTTGACAAGGAGGTTGAAGATGTGAATAGGGACATTAAAGCCTATGAAGCCTGTCTTAAACGCTTGGAGGGAGAGACAAGGGATGTTCTTAGTGAGGCTGATTTTCTCAAGGAAAAACTAAAGATTGAGGAAGAAGAGAGAAAACTTGAAGCAGCAATTGAAGAAATGGAGAAACAGAATGCGGAAGTAAATAATGAGCTGAAGGAACTTGAGTTAAAATCTAGCAGATTTAAGGAATTGGAGGAGCGGTACTGGCATGAGTTCAATAATTTTCAGTTTCAATTAATTTCGAATCAGGAAGAGAGAGATGCAATTTTGTCCAAGATAGAAGTTTCACAGGCGCACTTGGAGTTGTTGAAACGAACTAACGTGCTCAATGATGCCTTTCCTATCTGGCATGATGGAGAATTTGGTACCATCAACAATTTTCGACTTGGACGACTTCCAAAAATTCCGGTTGAGTGGGATGAGATAAATGCTGCCTGGGGTCAAGCCTGCCTTCTCCTCCATACCATGTGTCAATATTTCCGTCCAAGATTTCAATATCGAATAAAAATACTTCCTATGGGCAGCTACCCTCGGATTATGGACAACAACAACAATACTTATGAGCTGTTTGGTCCCGTGAACTTGTTTTGGAGCACTCGGTATGACAAAGCAATGACATTGTTCTTGACATGCCTTAAAGACTTTGCTGAGTTTGCAAATTCCAAGGATCAAGAAAACAACATACCACCTGAAAAATGCTTTAAATTGCCATACAAGATTGAGAATGACAAAGTGGAAAGCTATTCTATCACTCAAAGCTTCAATAAGCAGGAGAATTGGACTAAAGCTCTAAAGTACACCCTCTGCAATTTGAAATGGGCTCTGTATTGGTTTGTTGGGAATACGAACTTCCAGCCTCTTTCTGCAGTGTCTTCACATGCTGAAGTTCCAGGCGTCAGCTCATTGTACACAAGACGTGGTACCGACTCCAAGTCTGAGTTCCGAAACACATCAAATCCATGA

Protein Analysis

509

Amino Acids

58.12

Weight (kDa)

5.75

Isoelectric Point (pI)

36.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 318
AasI GACNNNNNNGTC 1 cut(s) 381
Acc65I GGTACC 2 cut(s) 929, 1484
AccB1I GGYRCC 3 cut(s) 89, 929, 1484
AccBSI CCGCTC 1 cut(s) 763
AciI CCGC 4 cut(s) 67, 264, 698, 763
AclWI GGATC 3 cut(s) 26, 39, 1239
AcsI RAATTY 4 cut(s) 37, 923, 966, 1222
AcuI CTGAAG 2 cut(s) 737, 1467
AcyI GRCGYC 2 cut(s) 90, 1458
AfaI GTAC 5 cut(s) 767, 931, 1361, 1472, 1486
AfiI CCNNNNNNNGG 3 cut(s) 257, 371, 436
AhdI GACNNNNNGTC 1 cut(s) 1495
AjiI CACGTC 1 cut(s) 1481
AjnI CCWGG 3 cut(s) 225, 998, 1453
AjuI GAANNNNNNNTTGG 2 cut(s) 1487, 1519
AluBI AGCT 7 cut(s) 715, 1089, 1129, 1305, 1323, 1352, 1464
AluI AGCT 7 cut(s) 715, 1089, 1129, 1305, 1323, 1352, 1464
Alw21I GWGCWC 2 cut(s) 891, 1160
Alw26I GTCTC 1 cut(s) 584
AlwI GGATC 3 cut(s) 26, 39, 1239
AoxI GGCC 1 cut(s) 348
ApaI GGGCCC 1 cut(s) 352
ApeKI GCWGC 4 cut(s) 391, 668, 995, 1086
ApoI RAATTY 4 cut(s) 37, 923, 966, 1222
ArsI GACNNNNNNTTYG 2 cut(s) 182, 214
AseI ATTAAT 1 cut(s) 800
Asp718I GGTACC 2 cut(s) 929, 1484
AspLEI GCGC 2 cut(s) 92, 859
AspS9I GGNCC 5 cut(s) 348, 349, 374, 383, 1136
AsuII TTCGAA 1 cut(s) 806
AvaII GGWCC 3 cut(s) 374, 383, 1136
BaeGI GKGCMC 1 cut(s) 352
BamHI GGATCC 1 cut(s) 31
BanI GGYRCC 3 cut(s) 89, 929, 1484
BanII GRGCYC 3 cut(s) 149, 352, 1387
BbsI GAAGAC 1 cut(s) 1428
Bbv12I GWGCWC 2 cut(s) 891, 1160
BbvI GCAGC 4 cut(s) 403, 680, 982, 1098
BccI CCATC 5 cut(s) 181, 332, 362, 911, 941
BceAI ACGGC 1 cut(s) 343
BcgI CGANNNNNNTGC 2 cut(s) 83, 117
BciT130I CCWGG 3 cut(s) 227, 1000, 1455
BcoDI GTCTC 1 cut(s) 584
BfaI CTAG 1 cut(s) 738
BfmI CTRYAG 1 cut(s) 1428
BfoI RGCGCY 1 cut(s) 93
BisI GCNGC 6 cut(s) 67, 264, 392, 669, 996, 1087
BlsI GCNGC 6 cut(s) 68, 265, 393, 670, 997, 1088
Bme1390I CCNGG 3 cut(s) 227, 1000, 1455
Bme18I GGWCC 3 cut(s) 374, 383, 1136
BmeRI GACNNNNNGTC 1 cut(s) 1495
BmgBI CACGTC 1 cut(s) 1481
BmgT120I GGNCC 5 cut(s) 348, 349, 374, 383, 1136
BmiI GGNNCC 9 cut(s) 33, 91, 262, 349, 350, 376, 931, 1138, 1486
BmrFI CCNGG 3 cut(s) 227, 1000, 1455
BmrI ACTGGG 1 cut(s) 346
BmsI GCATC 3 cut(s) 90, 814, 886
BmuI ACTGGG 1 cut(s) 346
BpiI GAAGAC 1 cut(s) 1428
Bpu14I TTCGAA 1 cut(s) 806
BpuEI CTTGAG 2 cut(s) 608, 746
BsaHI GRCGYC 2 cut(s) 90, 1458
BsaJI CCNNGG 4 cut(s) 225, 999, 1094, 1227
BsaWI WCCGGW 1 cut(s) 970
BsaXI ACNNNNNCTCC 2 cut(s) 749, 779
Bsc4I CCNNNNNNNGG 3 cut(s) 257, 371, 436
Bse1I ACTGG 3 cut(s) 277, 352, 773
Bse3DI GCAATG 2 cut(s) 297, 1182
BseBI CCWGG 3 cut(s) 227, 1000, 1455
BseDI CCNNGG 4 cut(s) 225, 999, 1094, 1227
BseGI GGATG 4 cut(s) 192, 301, 604, 988
BseLI CCNNNNNNNGG 3 cut(s) 257, 371, 436
BseMI GCAATG 2 cut(s) 297, 1182
BseMII CTCAG 3 cut(s) 315, 1203, 1491
BseNI ACTGG 3 cut(s) 277, 352, 773
BseRI GAGGAG 3 cut(s) 234, 773, 1010
BseSI GKGCMC 1 cut(s) 352
BseXI GCAGC 4 cut(s) 403, 680, 982, 1098
BshFI GGCC 1 cut(s) 350
BshNI GGYRCC 3 cut(s) 89, 929, 1484
BsiHKAI GWGCWC 2 cut(s) 891, 1160
BsiSI CCGG 2 cut(s) 135, 971
BslFI GGGAC 4 cut(s) 224, 234, 560, 1122
BslI CCNNNNNNNGG 3 cut(s) 257, 371, 436
BsmAI GTCTC 1 cut(s) 584
BsmFI GGGAC 4 cut(s) 224, 234, 560, 1122
BsmI GAATGC 2 cut(s) 497, 700
BsnI GGCC 1 cut(s) 350
Bsp119I TTCGAA 1 cut(s) 806
Bsp120I GGGCCC 1 cut(s) 348
Bsp1286I GDGCHC 5 cut(s) 149, 352, 891, 1160, 1387
Bsp1407I TGTACA 1 cut(s) 1470
Bsp143I GATC 2 cut(s) 31, 1231
BspACI CCGC 4 cut(s) 67, 264, 698, 763
BspANI GGCC 1 cut(s) 350
BspCNI CTCAG 3 cut(s) 316, 1204, 1492
BspLI GGNNCC 9 cut(s) 33, 91, 262, 349, 350, 376, 931, 1138, 1486
BspMAI CTGCAG 1 cut(s) 1432
BspPI GGATC 3 cut(s) 26, 39, 1239
BspQI GCTCTTC 1 cut(s) 154
BspT104I TTCGAA 1 cut(s) 806
BspT107I GGYRCC 3 cut(s) 89, 929, 1484
BsrBI CCGCTC 1 cut(s) 763
BsrDI GCAATG 2 cut(s) 297, 1182
BsrGI TGTACA 1 cut(s) 1470
BsrI ACTGG 3 cut(s) 277, 352, 773
BssECI CCNNGG 4 cut(s) 225, 999, 1094, 1227
BssMI GATC 2 cut(s) 31, 1231
BssNI GRCGYC 2 cut(s) 90, 1458
BssT1I CCWWGG 1 cut(s) 1227
Bst2UI CCWGG 3 cut(s) 227, 1000, 1455
Bst4CI ACNGT 1 cut(s) 170
Bst6I CTCTTC 3 cut(s) 154, 645, 810
BstACI GRCGYC 2 cut(s) 90, 1458
BstAUI TGTACA 1 cut(s) 1470
BstBI TTCGAA 1 cut(s) 806
BstC8I GCNNGC 2 cut(s) 140, 1012
BstDEI CTNAG 4 cut(s) 324, 605, 1212, 1500
BstENI CCTNNNNNAGG 1 cut(s) 369
BstF5I GGATG 4 cut(s) 192, 301, 604, 988
BstH2I RGCGCY 1 cut(s) 93
BstHHI GCGC 2 cut(s) 92, 859
BstKTI GATC 2 cut(s) 34, 1234
BstMAI GTCTC 1 cut(s) 584
BstMBI GATC 2 cut(s) 31, 1231
BstMWI GCNNNNNNNGC 6 cut(s) 63, 87, 144, 563, 769, 1217
BstNI CCWGG 3 cut(s) 227, 1000, 1455
BstNSI RCATGY 3 cut(s) 142, 1197, 1445
BstSCI CCNGG 3 cut(s) 225, 998, 1453
BstSFI CTRYAG 1 cut(s) 1428
BstSLI GKGCMC 1 cut(s) 352
BstV1I GCAGC 4 cut(s) 403, 680, 982, 1098
BstV2I GAAGAC 1 cut(s) 1428
BstX2I RGATCY 1 cut(s) 31
BstYI RGATCY 1 cut(s) 31
BsuRI GGCC 1 cut(s) 350
BtrI CACGTC 1 cut(s) 1481
BtsCI GGATG 4 cut(s) 192, 301, 604, 988
BtsI GCAGTG 1 cut(s) 1437
BtsIMutI CAGTG 2 cut(s) 175, 1437
Cac8I GCNNGC 2 cut(s) 140, 1012
CfoI GCGC 2 cut(s) 92, 859
Cfr13I GGNCC 5 cut(s) 348, 349, 374, 383, 1136
CseI GACGC 1 cut(s) 1447
Csp6I GTAC 5 cut(s) 766, 930, 1360, 1471, 1485
CviAII CATG 9 cut(s) 139, 158, 496, 773, 914, 1030, 1194, 1442, 1524
CviQI GTAC 5 cut(s) 766, 930, 1360, 1471, 1485
DdeI CTNAG 4 cut(s) 324, 605, 1212, 1500
DinI GGCGCC 1 cut(s) 91
DpnI GATC 2 cut(s) 33, 1233
DpnII GATC 2 cut(s) 31, 1231
DraI TTTAAA 1 cut(s) 1267
DrdI GACNNNNNNGTC 1 cut(s) 381
DriI GACNNNNNGTC 1 cut(s) 1495
DseDI GACNNNNNNGTC 1 cut(s) 381
Eam1104I CTCTTC 3 cut(s) 154, 645, 810
Eam1105I GACNNNNNGTC 1 cut(s) 1495
EarI CTCTTC 3 cut(s) 154, 645, 810
Eco130I CCWWGG 1 cut(s) 1227
Eco24I GRGCYC 3 cut(s) 149, 352, 1387
Eco47I GGWCC 3 cut(s) 374, 383, 1136
Eco57I CTGAAG 2 cut(s) 737, 1467
EcoNI CCTNNNNNAGG 1 cut(s) 369
EcoO109I RGGNCCY 2 cut(s) 348, 374
EcoRII CCWGG 3 cut(s) 225, 998, 1453
EcoT14I CCWWGG 1 cut(s) 1227
EcoT22I ATGCAT 2 cut(s) 159, 497
EcoT38I GRGCYC 3 cut(s) 149, 352, 1387
EgeI GGCGCC 1 cut(s) 91
EheI GGCGCC 1 cut(s) 91
ErhI CCWWGG 1 cut(s) 1227
FaeI CATG 9 cut(s) 142, 161, 499, 776, 917, 1033, 1197, 1445, 1527
FalI AAGNNNNNCTT 4 cut(s) 555, 587, 999, 1031
FaqI GGGAC 4 cut(s) 224, 234, 560, 1122
FatI CATG 9 cut(s) 138, 157, 495, 772, 913, 1029, 1193, 1441, 1523
Fnu4HI GCNGC 6 cut(s) 67, 264, 392, 669, 996, 1087
FokI GGATG 4 cut(s) 199, 308, 611, 995
FriOI GRGCYC 3 cut(s) 149, 352, 1387
Fsp4HI GCNGC 6 cut(s) 67, 264, 392, 669, 996, 1087
FspBI CTAG 1 cut(s) 738
GlaI GCGC 2 cut(s) 91, 858
GluI GCNGC 6 cut(s) 67, 264, 392, 669, 996, 1087
HaeII RGCGCY 1 cut(s) 93
HaeIII GGCC 1 cut(s) 350
HapII CCGG 2 cut(s) 135, 971
HgaI GACGC 1 cut(s) 1447
HhaI GCGC 2 cut(s) 92, 859
Hin1I GRCGYC 2 cut(s) 90, 1458
Hin1II CATG 9 cut(s) 142, 161, 499, 776, 917, 1033, 1197, 1445, 1527
Hin6I GCGC 2 cut(s) 90, 857
HinP1I GCGC 2 cut(s) 90, 857
HindIII AAGCTT 1 cut(s) 1321
HinfI GANTC 6 cut(s) 95, 237, 299, 326, 808, 1490
HpaII CCGG 2 cut(s) 135, 971
Hpy166II GTNNAC 3 cut(s) 1144, 1362, 1473
Hpy188I TCNGA 6 cut(s) 36, 325, 511, 1098, 1501, 1508
Hpy188III TCNNGA 6 cut(s) 282, 430, 488, 812, 1189, 1235
Hpy8I GTNNAC 3 cut(s) 1144, 1362, 1473
Hpy99I CGWCG 2 cut(s) 89, 364
HpyAV CCTTC 2 cut(s) 712, 1025
HpyCH4III ACNGT 1 cut(s) 170
HpyCH4IV ACGT 2 cut(s) 885, 1480
HpyCH4V TGCA 9 cut(s) 81, 142, 157, 391, 495, 827, 1220, 1371, 1430
HpyF10VI GCNNNNNNNGC 6 cut(s) 63, 87, 144, 563, 769, 1217
HpyF3I CTNAG 4 cut(s) 324, 605, 1212, 1500
HpySE526I ACGT 2 cut(s) 885, 1480
Hsp92I GRCGYC 2 cut(s) 90, 1458
Hsp92II CATG 9 cut(s) 142, 161, 499, 776, 917, 1033, 1197, 1445, 1527
HspAI GCGC 2 cut(s) 90, 857
KasI GGCGCC 1 cut(s) 89
KpnI GGTACC 2 cut(s) 933, 1488
Kzo9I GATC 2 cut(s) 31, 1231
LguI GCTCTTC 1 cut(s) 154
LmnI GCTCC 4 cut(s) 137, 260, 760, 1155
Lsp1109I GCAGC 4 cut(s) 403, 680, 982, 1098
LweI GCATC 3 cut(s) 90, 814, 886
MaeI CTAG 1 cut(s) 738
MaeII ACGT 2 cut(s) 885, 1480
MaeIII GTNAC 1 cut(s) 207
MalI GATC 2 cut(s) 33, 1233
MbiI CCGCTC 1 cut(s) 763
MboI GATC 2 cut(s) 31, 1231
MboII GAAGA 8 cut(s) 106, 141, 545, 659, 662, 689, 827, 1428
MfeI CAATTG 1 cut(s) 672
MflI RGATCY 1 cut(s) 31
MhlI GDGCHC 5 cut(s) 149, 352, 891, 1160, 1387
Mly113I GGCGCC 1 cut(s) 90
MlyI GAGTC 4 cut(s) 246, 308, 335, 1484
MmeI TCCRAC 1 cut(s) 238
Mph1103I ATGCAT 2 cut(s) 159, 497
MseI TTAA 7 cut(s) 552, 573, 731, 747, 800, 1200, 1266
MspI CCGG 2 cut(s) 135, 971
MspR9I CCNGG 3 cut(s) 227, 1000, 1455
MunI CAATTG 1 cut(s) 672
Mva1269I GAATGC 2 cut(s) 497, 700
MvaI CCWGG 3 cut(s) 227, 1000, 1455
MwoI GCNNNNNNNGC 6 cut(s) 63, 87, 144, 563, 769, 1217
NarI GGCGCC 1 cut(s) 90
NdeII GATC 2 cut(s) 31, 1231
NlaIII CATG 9 cut(s) 142, 161, 499, 776, 917, 1033, 1197, 1445, 1527
NlaIV GGNNCC 9 cut(s) 33, 91, 262, 349, 350, 376, 931, 1138, 1486
NsiI ATGCAT 2 cut(s) 159, 497
NspI RCATGY 3 cut(s) 142, 1197, 1445
NspV TTCGAA 1 cut(s) 806
PaeI GCATGC 1 cut(s) 142
PciSI GCTCTTC 1 cut(s) 154
PcsI WCGNNNNNNNCGW 2 cut(s) 90, 952
PctI GAATGC 2 cut(s) 497, 700
PfeI GAWTC 2 cut(s) 95, 808
PkrI GCNGC 6 cut(s) 68, 265, 393, 670, 997, 1088
PleI GAGTC 4 cut(s) 245, 307, 334, 1484
PluTI GGCGCC 1 cut(s) 93
PpsI GAGTC 4 cut(s) 245, 307, 334, 1484
PpuMI RGGWCCY 1 cut(s) 374
PshBI ATTAAT 1 cut(s) 800
PsiI TTATAA 1 cut(s) 318
Psp5II RGGWCCY 1 cut(s) 374
Psp6I CCWGG 3 cut(s) 225, 998, 1453
PspGI CCWGG 3 cut(s) 225, 998, 1453
PspN4I GGNNCC 9 cut(s) 33, 91, 262, 349, 350, 376, 931, 1138, 1486
PspOMI GGGCCC 1 cut(s) 348
PspPI GGNCC 5 cut(s) 348, 349, 374, 383, 1136
PspPPI RGGWCCY 1 cut(s) 374
PstI CTGCAG 1 cut(s) 1432
PsuI RGATCY 1 cut(s) 31
RsaI GTAC 5 cut(s) 767, 931, 1361, 1472, 1486
RsaNI GTAC 5 cut(s) 766, 930, 1360, 1471, 1485
SapI GCTCTTC 1 cut(s) 154
SaqAI TTAA 7 cut(s) 552, 573, 731, 747, 800, 1200, 1266
SatI GCNGC 6 cut(s) 67, 264, 392, 669, 996, 1087
Sau3AI GATC 2 cut(s) 31, 1231
Sau96I GGNCC 5 cut(s) 348, 349, 374, 383, 1136
SchI GAGTC 4 cut(s) 246, 308, 335, 1484
ScrFI CCNGG 3 cut(s) 227, 1000, 1455
SduI GDGCHC 5 cut(s) 149, 352, 891, 1160, 1387
SfaNI GCATC 3 cut(s) 90, 814, 886
SfcI CTRYAG 1 cut(s) 1428
SfoI GGCGCC 1 cut(s) 91
SfuI TTCGAA 1 cut(s) 806
SinI GGWCC 3 cut(s) 374, 383, 1136
SmlI CTYRAG 2 cut(s) 623, 725
SmoI CTYRAG 2 cut(s) 623, 725
SphI GCATGC 1 cut(s) 142
SsiI CCGC 4 cut(s) 67, 264, 698, 763
SspDI GGCGCC 1 cut(s) 89
SspI AATATT 1 cut(s) 1040
SspMI CTAG 1 cut(s) 738
StyD4I CCNGG 3 cut(s) 225, 998, 1453
StyI CCWWGG 1 cut(s) 1227
TaaI ACNGT 1 cut(s) 170
TaiI ACGT 2 cut(s) 888, 1483
TaqI TCGA 3 cut(s) 806, 946, 1063
TatI WGTACW 2 cut(s) 1359, 1470
TauI GCSGC 2 cut(s) 69, 266
TfiI GAWTC 2 cut(s) 95, 808
Tru1I TTAA 7 cut(s) 552, 573, 731, 747, 800, 1200, 1266
Tru9I TTAA 7 cut(s) 552, 573, 731, 747, 800, 1200, 1266
TscAI CASTG 2 cut(s) 175, 1437
TseI GCWGC 4 cut(s) 391, 668, 995, 1086
TspDTI ATGAA 1 cut(s) 576
TspGWI ACGGA 2 cut(s) 199, 1034
TspRI CASTG 2 cut(s) 175, 1437
VpaK11BI GGWCC 3 cut(s) 374, 383, 1136
VspI ATTAAT 1 cut(s) 800
XagI CCTNNNNNAGG 1 cut(s) 369
XapI RAATTY 4 cut(s) 37, 923, 966, 1222
XceI RCATGY 3 cut(s) 142, 1197, 1445
XspI CTAG 1 cut(s) 738
Zsp2I ATGCAT 2 cut(s) 159, 497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.