Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0005026

Physical Location & Seq

Genomic Coordinates Reverse (-)

18717910 .. 18722638

Gene Structure 4729 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1079900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1524 bp

ATGGGCGAAAGGGGTCGGAGGTTTCAGGTGGATCCGAACGTCCCAAGATATGCATGCCAGAACTGCCGTAACTATCTCTGCGTCGTCGGCGCCGATTCCTACGCCGAAAAATTCTTCCACGATTTCTCTCGCTCCGGCATGCAGGGTTCTTCAATGCATGGGGCGAACAGTGTGTTATCATCCACACGGATGGACAATTCTTTTGTTGTGTTACCACAGCAAAGAGCCCAGGCACAAGGAGTCCCTCCGCGTCCCCGTGGTGGAGCAGTCAATACAGGCCAGTCTGAAAAGGCAATGGATGAGTCCTTTGTGGTTGTTTATAAATCTGAGTCCTCACCAGATGGTGGTGGGGCCCATTTGCCGTTACCTGATGCAGGACCCAATGGTCCTTTGCAGCCTAACAATTCTGGGTTTGACTCTACTATAACTCTCCTGAATCGTGCATTTGAAATTGCCACCACCCAAACACAGGTTGAGCAACCTTTATGCATTGAATGCATGAGGGTATTGTTTGATAAACTTGACAAGGAGGTTGAAGATGTGAATAGGGACATTAAAGCATACCAAGCCTGTCTTAAACGCTTGGAGGGTGGGACAAGGGAAGTGCTTAGTGAGACTGATTTTCTCAAGGAAAAACTGAAGATTGAGGAAGAACAGAGAAAACTTGAAGCAGAAATTGAAGAGATGGAGAAACAGAATGCTGAAGTAAATAATGAACTCAAGGGACTTGAGTTAAAATCTAGCAGATTTAAGGAGTTGGAGGAGCAGTACTGGCACAAGTTCAATAATTTTCAGTTTCAATTAATTTCAAATCAGGAAGAAAGAGATGCAATTTTGGCCAAGATAGAAGTTTCACAAGCACACTTGGAGTTGTTGAAACGAACTAATGTGCTCAATGATGCCTTTCCCATCGGGCATGATGGAGAATTTGGTACCACTAACAATTTTCGACTAGGACGACTTCCTAAAATTCCGGTTGAGTGGGATGAGATAAATGCTGCCTGGGGTCAAGCCTGCCTTCTTCTCCATACAATGTGTCAATATTTCCGGCCAAAGTTTGAGTATCGAATAAAAATACTTCCTATGGGCAGCTACCCTCGGATTTTGGACAACAATAACAATATTTATGAGCTGTTTGGTCCGGTGAACTTGTTCTGGAGCACTCGCTATGACAAAGCAATGACATTGTTCTTGACATGCCTCAAGGACTTTGCTGAATTTGCAAATTCCAAGGACCAAGAAAACAATATACCACTCGAAAAATGCTTTAAATTGCCCTACAAGATTGAGAATGACAAAGTGGAAACGTGTTCGATCACACAAAGCTTCAATAAGCAGGAGAATTGGACTAAAGCTCTCAAGTACACCCTCAACAATTTGAAATGGGCTCTGTATTGGTTTGTTGGGAATACAAACTTCCAGCCTCTTTCTCCAGCAGTGTCTTCTTCACATGCTGAAGTCTCAGGTACAGGCTCTTCGTACTCGAGACGCAGTACCAACTCCAAGTCTGAGTTCCAAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000045 GO:0000407 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005942 GO:0006605 GO:0006623 GO:0006810 GO:0006886 GO:0006914 GO:0006950 GO:0006952 GO:0006995 GO:0006996 GO:0007033 GO:0007034 GO:0007154 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009267 GO:0009605 GO:0009607 GO:0009620 GO:0009846 GO:0009856 GO:0009987 GO:0009991 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0016236 GO:0019898 GO:0022414 GO:0022607 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031982 GO:0032501 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034271 GO:0034272 GO:0034613 GO:0035032 GO:0042594 GO:0042886 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043562 GO:0044085 GO:0044237 GO:0044248 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0044706 GO:0044804 GO:0045184 GO:0045324 GO:0046907 GO:0050832 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051704 GO:0051707 GO:0051716 GO:0061695 GO:0061919 GO:0070727 GO:0070925 GO:0071496 GO:0071702 GO:0071705 GO:0071840 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098542 GO:0098796 GO:1902494 GO:1905037 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04136 ko04137 ko04138 ko04140 ko04215 ko04371 ko05167 map04136 map04137 map04138 map04140 map04215 map04371 map05167

Pfam Domains

Protein Families

APG6

Protein Analysis

508

Amino Acids

57.88

Weight (kDa)

5.81

Isoelectric Point (pI)

42.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
APG6_N	PF17675	161 - 289	7.7e-29	Apg6 coiled-coil region
APG6	PF04111	292 - 467	1.9e-58	Apg6 BARA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005026)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61710 AT3G61710 AT3G61710 AT3G61710
fragaria_vesca	FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330 FvH4_7g16330
malus_domestica	MD01G1079900.v1.1 MD07G1148700.v1.1
prunus_persica	Prupe.2G187200_v2.0.a1
pyrus_communis	pycom01g10810 pycom07g14770
rosa_chinensis	RchiOBHm_Chr1g0359341
rosa_laevigata	RLG00000027878
rosa_multiflora	Rmu_sc0013596.1_g000001 Rmu_sc0017222.1_g000001 Rmu_ssc0000332.1_g000001
rosa_roxburghii	Rroxscaffold_4G00297080
rosa_rugosa	Rorug01G0270200
rosa_samantha	Rh1AG283700 Rh1BG249900 Rh1CG267800 Rh1DG278800
rosa_wichuraiana	Rw1G025190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	321
AasI	GACNNNNNNGTC	1 cut(s)	384
Acc65I	GGTACC	1 cut(s)	932
AccB1I	GGYRCC	2 cut(s)	89, 932
AccB7I	CCANNNNNTGG	1 cut(s)	344
AccII	CGCG	1 cut(s)	250
AciI	CCGC	1 cut(s)	248
AclWI	GGATC	2 cut(s)	26, 39
AcoI	YGGCCR	2 cut(s)	837, 1049
AcsI	RAATTY	5 cut(s)	110, 926, 969, 1217, 1225
AcuI	CTGAAG	3 cut(s)	659, 723, 1476
AcyI	GRCGYC	1 cut(s)	90
AfaI	GTAC	6 cut(s)	770, 934, 1364, 1468, 1481, 1495
AfiI	CCNNNNNNNGG	4 cut(s)	260, 344, 374, 469
AflIII	ACRYGT	1 cut(s)	1307
AjnI	CCWGG	2 cut(s)	228, 1001
AjuI	GAANNNNNNNTTGG	1 cut(s)	1496
AluBI	AGCT	4 cut(s)	1092, 1132, 1326, 1355
AluI	AGCT	4 cut(s)	1092, 1132, 1326, 1355
Alw21I	GWGCWC	2 cut(s)	894, 1163
Alw26I	GTCTC	3 cut(s)	608, 1465, 1480
AlwI	GGATC	2 cut(s)	26, 39
Ama87I	CYCGRG	1 cut(s)	1483
AoxI	GGCC	4 cut(s)	277, 351, 837, 1049
ApaI	GGGCCC	1 cut(s)	355
ApeKI	GCWGC	3 cut(s)	394, 998, 1089
ApoI	RAATTY	5 cut(s)	110, 926, 969, 1217, 1225
ArsI	GACNNNNNNTTYG	2 cut(s)	185, 217
AseI	ATTAAT	1 cut(s)	803
Asp700I	GAANNNNTTC	1 cut(s)	1151
Asp718I	GGTACC	1 cut(s)	932
AspLEI	GCGC	1 cut(s)	92
AspS9I	GGNCC	6 cut(s)	351, 352, 377, 386, 1139, 1234
AsuHPI	GGTGA	2 cut(s)	327, 1156
AvaI	CYCGRG	1 cut(s)	1483
AvaII	GGWCC	4 cut(s)	377, 386, 1139, 1234
BaeGI	GKGCMC	1 cut(s)	355
BalI	TGGCCA	1 cut(s)	839
BamHI	GGATCC	1 cut(s)	31
BanI	GGYRCC	2 cut(s)	89, 932
BanII	GRGCYC	3 cut(s)	229, 355, 1390
BarI	GAAGNNNNNNTAC	2 cut(s)	1459, 1491
BbsI	GAAGAC	1 cut(s)	1434
Bbv12I	GWGCWC	2 cut(s)	894, 1163
BbvI	GCAGC	3 cut(s)	406, 985, 1101
BccI	CCATC	5 cut(s)	184, 335, 679, 914, 917
BceAI	ACGGC	2 cut(s)	51, 346
BciT130I	CCWGG	2 cut(s)	230, 1003
BcoDI	GTCTC	3 cut(s)	608, 1465, 1480
BfaI	CTAG	2 cut(s)	741, 953
BfoI	RGCGCY	1 cut(s)	93
BisI	GCNGC	3 cut(s)	395, 999, 1090
BlsI	GCNGC	3 cut(s)	396, 1000, 1091
BmcAI	AGTACT	1 cut(s)	770
Bme1390I	CCNGG	2 cut(s)	230, 1003
Bme18I	GGWCC	4 cut(s)	377, 386, 1139, 1234
BmeT110I	CYCGRG	1 cut(s)	1483
BmgT120I	GGNCC	6 cut(s)	351, 352, 377, 386, 1139, 1234
BmiI	GGNNCC	6 cut(s)	33, 91, 352, 353, 379, 934
BmrFI	CCNGG	2 cut(s)	230, 1003
BmsI	GCATC	3 cut(s)	361, 817, 889
BpiI	GAAGAC	1 cut(s)	1434
BpmI	CTGGAG	2 cut(s)	1177, 1416
BpuEI	CTTGAG	5 cut(s)	611, 704, 749, 1187, 1343
BsaHI	GRCGYC	1 cut(s)	90
BsaJI	CCNNGG	5 cut(s)	228, 256, 1002, 1097, 1230
BsaWI	WCCGGW	2 cut(s)	973, 1141
BsaXI	ACNNNNNCTCC	2 cut(s)	752, 782
Bsc4I	CCNNNNNNNGG	4 cut(s)	260, 344, 374, 469
Bse1I	ACTGG	2 cut(s)	280, 776
Bse3DI	GCAATG	2 cut(s)	300, 1185
BseBI	CCWGG	2 cut(s)	230, 1003
BseDI	CCNNGG	5 cut(s)	228, 256, 1002, 1097, 1230
BseGI	GGATG	4 cut(s)	179, 195, 304, 991
BseLI	CCNNNNNNNGG	4 cut(s)	260, 344, 374, 469
BseMI	GCAATG	2 cut(s)	300, 1185
BseMII	CTCAG	3 cut(s)	318, 1476, 1500
BseNI	ACTGG	2 cut(s)	280, 776
BseRI	GAGGAG	1 cut(s)	776
BseSI	GKGCMC	1 cut(s)	355
BseXI	GCAGC	3 cut(s)	406, 985, 1101
Bsh1236I	CGCG	1 cut(s)	250
BshFI	GGCC	4 cut(s)	279, 353, 839, 1051
BshNI	GGYRCC	2 cut(s)	89, 932
BsiHKAI	GWGCWC	2 cut(s)	894, 1163
BsiHKCI	CYCGRG	1 cut(s)	1483
BsiSI	CCGG	4 cut(s)	135, 974, 1048, 1142
BslFI	GGGAC	6 cut(s)	26, 227, 237, 563, 607, 738
BslI	CCNNNNNNNGG	4 cut(s)	260, 344, 374, 469
BsmAI	GTCTC	3 cut(s)	608, 1465, 1480
BsmBI	CGTCTC	1 cut(s)	1480
BsmFI	GGGAC	6 cut(s)	26, 227, 237, 563, 607, 738
BsmI	GAATGC	2 cut(s)	500, 703
BsnI	GGCC	4 cut(s)	279, 353, 839, 1051
BsoBI	CYCGRG	1 cut(s)	1483
Bsp120I	GGGCCC	1 cut(s)	351
Bsp1286I	GDGCHC	5 cut(s)	229, 355, 894, 1163, 1390
Bsp143I	GATC	2 cut(s)	31, 1314
BspACI	CCGC	1 cut(s)	248
BspANI	GGCC	4 cut(s)	279, 353, 839, 1051
BspCNI	CTCAG	3 cut(s)	319, 1475, 1501
BspFNI	CGCG	1 cut(s)	250
BspLI	GGNNCC	6 cut(s)	33, 91, 352, 353, 379, 934
BspPI	GGATC	2 cut(s)	26, 39
BspQI	GCTCTTC	1 cut(s)	1480
BspT107I	GGYRCC	2 cut(s)	89, 932
BsrDI	GCAATG	2 cut(s)	300, 1185
BsrI	ACTGG	2 cut(s)	280, 776
BssECI	CCNNGG	5 cut(s)	228, 256, 1002, 1097, 1230
BssMI	GATC	2 cut(s)	31, 1314
BssNI	GRCGYC	1 cut(s)	90
BssT1I	CCWWGG	1 cut(s)	1230
Bst2UI	CCWGG	2 cut(s)	230, 1003
Bst4CI	ACNGT	1 cut(s)	170
Bst6I	CTCTTC	2 cut(s)	675, 1480
BstACI	GRCGYC	1 cut(s)	90
BstAPI	GCANNNNNTGC	1 cut(s)	495
BstC8I	GCNNGC	3 cut(s)	55, 140, 1015
BstDEI	CTNAG	4 cut(s)	327, 608, 1462, 1509
BstDSI	CCRYGG	1 cut(s)	256
BstENI	CCTNNNNNAGG	1 cut(s)	372
BstF5I	GGATG	4 cut(s)	179, 195, 304, 991
BstFNI	CGCG	1 cut(s)	250
BstH2I	RGCGCY	1 cut(s)	93
BstHHI	GCGC	1 cut(s)	92
BstKTI	GATC	2 cut(s)	34, 1317
BstMAI	GTCTC	3 cut(s)	608, 1465, 1480
BstMBI	GATC	2 cut(s)	31, 1314
BstMWI	GCNNNNNNNGC	7 cut(s)	63, 87, 495, 566, 772, 836, 1220
BstNI	CCWGG	2 cut(s)	230, 1003
BstNSI	RCATGY	4 cut(s)	57, 142, 1200, 1454
BstSCI	CCNGG	2 cut(s)	228, 1001
BstSLI	GKGCMC	1 cut(s)	355
BstUI	CGCG	1 cut(s)	250
BstV1I	GCAGC	3 cut(s)	406, 985, 1101
BstV2I	GAAGAC	1 cut(s)	1434
BstX2I	RGATCY	1 cut(s)	31
BstXI	CCANNNNNNTGG	1 cut(s)	190
BstYI	RGATCY	1 cut(s)	31
BsuRI	GGCC	4 cut(s)	279, 353, 839, 1051
BtgI	CCRYGG	1 cut(s)	256
BtsCI	GGATG	4 cut(s)	179, 195, 304, 991
BtsI	GCAGTG	1 cut(s)	1443
BtsIMutI	CAGTG	2 cut(s)	175, 1443
Cac8I	GCNNGC	3 cut(s)	55, 140, 1015
CfoI	GCGC	1 cut(s)	92
Cfr13I	GGNCC	6 cut(s)	351, 352, 377, 386, 1139, 1234
CseI	GACGC	3 cut(s)	70, 239, 1497
Csp6I	GTAC	6 cut(s)	769, 933, 1363, 1467, 1480, 1494
CviAII	CATG	7 cut(s)	54, 139, 158, 499, 917, 1197, 1451
CviQI	GTAC	6 cut(s)	769, 933, 1363, 1467, 1480, 1494
DdeI	CTNAG	4 cut(s)	327, 608, 1462, 1509
DinI	GGCGCC	1 cut(s)	91
DpnI	GATC	2 cut(s)	33, 1316
DpnII	GATC	2 cut(s)	31, 1314
DraI	TTTAAA	1 cut(s)	1270
DrdI	GACNNNNNNGTC	1 cut(s)	384
DseDI	GACNNNNNNGTC	1 cut(s)	384
EaeI	YGGCCR	2 cut(s)	837, 1049
Eam1104I	CTCTTC	2 cut(s)	675, 1480
EarI	CTCTTC	2 cut(s)	675, 1480
Eco130I	CCWWGG	1 cut(s)	1230
Eco24I	GRGCYC	3 cut(s)	229, 355, 1390
Eco47I	GGWCC	4 cut(s)	377, 386, 1139, 1234
Eco57I	CTGAAG	3 cut(s)	659, 723, 1476
Eco88I	CYCGRG	1 cut(s)	1483
EcoNI	CCTNNNNNAGG	1 cut(s)	372
EcoO109I	RGGNCCY	2 cut(s)	351, 377
EcoRII	CCWGG	2 cut(s)	228, 1001
EcoT14I	CCWWGG	1 cut(s)	1230
EcoT22I	ATGCAT	4 cut(s)	55, 159, 491, 500
EcoT38I	GRGCYC	3 cut(s)	229, 355, 1390
EgeI	GGCGCC	1 cut(s)	91
EheI	GGCGCC	1 cut(s)	91
ErhI	CCWWGG	1 cut(s)	1230
Esp3I	CGTCTC	1 cut(s)	1480
FaeI	CATG	7 cut(s)	57, 142, 161, 502, 920, 1200, 1454
FalI	AAGNNNNNCTT	4 cut(s)	558, 590, 1002, 1034
FaqI	GGGAC	6 cut(s)	26, 227, 237, 563, 607, 738
FatI	CATG	7 cut(s)	53, 138, 157, 498, 916, 1196, 1450
Fnu4HI	GCNGC	3 cut(s)	395, 999, 1090
FokI	GGATG	4 cut(s)	166, 202, 311, 998
FriOI	GRGCYC	3 cut(s)	229, 355, 1390
Fsp4HI	GCNGC	3 cut(s)	395, 999, 1090
FspBI	CTAG	2 cut(s)	741, 953
GlaI	GCGC	1 cut(s)	91
GluI	GCNGC	3 cut(s)	395, 999, 1090
GsuI	CTGGAG	2 cut(s)	1177, 1416
HaeII	RGCGCY	1 cut(s)	93
HaeIII	GGCC	4 cut(s)	279, 353, 839, 1051
HapII	CCGG	4 cut(s)	135, 974, 1048, 1142
HgaI	GACGC	3 cut(s)	70, 239, 1497
HhaI	GCGC	1 cut(s)	92
Hin1I	GRCGYC	1 cut(s)	90
Hin1II	CATG	7 cut(s)	57, 142, 161, 502, 920, 1200, 1454
Hin6I	GCGC	1 cut(s)	90
HinP1I	GCGC	1 cut(s)	90
HindIII	AAGCTT	1 cut(s)	1324
HinfI	GANTC	6 cut(s)	95, 240, 302, 329, 416, 436
HpaII	CCGG	4 cut(s)	135, 974, 1048, 1142
HphI	GGTGA	2 cut(s)	327, 1156
Hpy166II	GTNNAC	2 cut(s)	1147, 1365
Hpy188I	TCNGA	6 cut(s)	18, 36, 286, 328, 1101, 1510
Hpy188III	TCNNGA	5 cut(s)	433, 815, 1156, 1192, 1485
Hpy8I	GTNNAC	2 cut(s)	1147, 1365
Hpy99I	CGWCG	2 cut(s)	86, 89
HpyAV	CCTTC	1 cut(s)	1028
HpyCH4III	ACNGT	1 cut(s)	170
HpyCH4IV	ACGT	2 cut(s)	39, 1307
HpyF10VI	GCNNNNNNNGC	7 cut(s)	63, 87, 495, 566, 772, 836, 1220
HpyF3I	CTNAG	4 cut(s)	327, 608, 1462, 1509
HpySE526I	ACGT	2 cut(s)	39, 1307
Hsp92I	GRCGYC	1 cut(s)	90
Hsp92II	CATG	7 cut(s)	57, 142, 161, 502, 920, 1200, 1454
HspAI	GCGC	1 cut(s)	90
KasI	GGCGCC	1 cut(s)	89
KpnI	GGTACC	1 cut(s)	936
Kzo9I	GATC	2 cut(s)	31, 1314
LguI	GCTCTTC	1 cut(s)	1480
LmnI	GCTCC	4 cut(s)	137, 263, 763, 1158
Lsp1109I	GCAGC	3 cut(s)	406, 985, 1101
LweI	GCATC	3 cut(s)	361, 817, 889
MaeI	CTAG	2 cut(s)	741, 953
MaeII	ACGT	2 cut(s)	39, 1307
MaeIII	GTNAC	3 cut(s)	68, 210, 363
MalI	GATC	2 cut(s)	33, 1316
MboI	GATC	2 cut(s)	31, 1314
MflI	RGATCY	1 cut(s)	31
MhlI	GDGCHC	5 cut(s)	229, 355, 894, 1163, 1390
MlsI	TGGCCA	1 cut(s)	839
MluNI	TGGCCA	1 cut(s)	839
Mly113I	GGCGCC	1 cut(s)	90
MlyI	GAGTC	4 cut(s)	249, 311, 338, 410
MmeI	TCCRAC	1 cut(s)	738
Mox20I	TGGCCA	1 cut(s)	839
Mph1103I	ATGCAT	4 cut(s)	55, 159, 491, 500
MroXI	GAANNNNTTC	1 cut(s)	1151
MscI	TGGCCA	1 cut(s)	839
MseI	TTAA	6 cut(s)	555, 576, 734, 750, 803, 1269
MslI	CAYNNNNRTG	1 cut(s)	188
Msp20I	TGGCCA	1 cut(s)	839
MspI	CCGG	4 cut(s)	135, 974, 1048, 1142
MspR9I	CCNGG	2 cut(s)	230, 1003
Mva1269I	GAATGC	2 cut(s)	500, 703
MvaI	CCWGG	2 cut(s)	230, 1003
MvnI	CGCG	1 cut(s)	250
MwoI	GCNNNNNNNGC	7 cut(s)	63, 87, 495, 566, 772, 836, 1220
NarI	GGCGCC	1 cut(s)	90
NdeII	GATC	2 cut(s)	31, 1314
NlaIII	CATG	7 cut(s)	57, 142, 161, 502, 920, 1200, 1454
NlaIV	GGNNCC	6 cut(s)	33, 91, 352, 353, 379, 934
NsiI	ATGCAT	4 cut(s)	55, 159, 491, 500
NspI	RCATGY	4 cut(s)	57, 142, 1200, 1454
PaeI	GCATGC	2 cut(s)	57, 142
PaeR7I	CTCGAG	1 cut(s)	1483
PciSI	GCTCTTC	1 cut(s)	1480
PcsI	WCGNNNNNNNCGW	2 cut(s)	90, 955
PctI	GAATGC	2 cut(s)	500, 703
PdmI	GAANNNNTTC	1 cut(s)	1151
PfeI	GAWTC	2 cut(s)	95, 436
PflMI	CCANNNNNTGG	1 cut(s)	344
PkrI	GCNGC	3 cut(s)	396, 1000, 1091
PleI	GAGTC	4 cut(s)	248, 310, 337, 410
PluTI	GGCGCC	1 cut(s)	93
PpsI	GAGTC	4 cut(s)	248, 310, 337, 410
PpuMI	RGGWCCY	1 cut(s)	377
PshBI	ATTAAT	1 cut(s)	803
PsiI	TTATAA	1 cut(s)	321
Psp5II	RGGWCCY	1 cut(s)	377
Psp6I	CCWGG	2 cut(s)	228, 1001
PspGI	CCWGG	2 cut(s)	228, 1001
PspN4I	GGNNCC	6 cut(s)	33, 91, 352, 353, 379, 934
PspOMI	GGGCCC	1 cut(s)	351
PspPI	GGNCC	6 cut(s)	351, 352, 377, 386, 1139, 1234
PspPPI	RGGWCCY	1 cut(s)	377
PsuI	RGATCY	1 cut(s)	31
RsaI	GTAC	6 cut(s)	770, 934, 1364, 1468, 1481, 1495
RsaNI	GTAC	6 cut(s)	769, 933, 1363, 1467, 1480, 1494
RseI	CAYNNNNRTG	1 cut(s)	188
SapI	GCTCTTC	1 cut(s)	1480
SaqAI	TTAA	6 cut(s)	555, 576, 734, 750, 803, 1269
SatI	GCNGC	3 cut(s)	395, 999, 1090
Sau3AI	GATC	2 cut(s)	31, 1314
Sau96I	GGNCC	6 cut(s)	351, 352, 377, 386, 1139, 1234
ScaI	AGTACT	1 cut(s)	770
SchI	GAGTC	4 cut(s)	249, 311, 338, 410
ScrFI	CCNGG	2 cut(s)	230, 1003
SduI	GDGCHC	5 cut(s)	229, 355, 894, 1163, 1390
SfaNI	GCATC	3 cut(s)	361, 817, 889
SfoI	GGCGCC	1 cut(s)	91
Sfr274I	CTCGAG	1 cut(s)	1483
SinI	GGWCC	4 cut(s)	377, 386, 1139, 1234
SlaI	CTCGAG	1 cut(s)	1483
SmiMI	CAYNNNNRTG	1 cut(s)	188
SmlI	CTYRAG	6 cut(s)	626, 719, 728, 1202, 1358, 1483
SmoI	CTYRAG	6 cut(s)	626, 719, 728, 1202, 1358, 1483
SphI	GCATGC	2 cut(s)	57, 142
SsiI	CCGC	1 cut(s)	248
SspDI	GGCGCC	1 cut(s)	89
SspI	AATATT	2 cut(s)	1043, 1123
SspMI	CTAG	2 cut(s)	741, 953
StyD4I	CCNGG	2 cut(s)	228, 1001
StyI	CCWWGG	1 cut(s)	1230
TaaI	ACNGT	1 cut(s)	170
TaiI	ACGT	2 cut(s)	42, 1310
TaqI	TCGA	5 cut(s)	949, 1066, 1257, 1313, 1484
TatI	WGTACW	2 cut(s)	768, 1362
TfiI	GAWTC	2 cut(s)	95, 436
Tru1I	TTAA	6 cut(s)	555, 576, 734, 750, 803, 1269
Tru9I	TTAA	6 cut(s)	555, 576, 734, 750, 803, 1269
TscAI	CASTG	2 cut(s)	175, 1443
TseI	GCWGC	3 cut(s)	394, 998, 1089
TspDTI	ATGAA	1 cut(s)	729
TspGWI	ACGGA	1 cut(s)	202
TspRI	CASTG	2 cut(s)	175, 1443
Van91I	CCANNNNNTGG	1 cut(s)	344
VpaK11BI	GGWCC	4 cut(s)	377, 386, 1139, 1234
VspI	ATTAAT	1 cut(s)	803
XagI	CCTNNNNNAGG	1 cut(s)	372
XapI	RAATTY	5 cut(s)	110, 926, 969, 1217, 1225
XceI	RCATGY	4 cut(s)	57, 142, 1200, 1454
XhoI	CTCGAG	1 cut(s)	1483
XmnI	GAANNNNTTC	1 cut(s)	1151
XspI	CTAG	2 cut(s)	741, 953
ZrmI	AGTACT	1 cut(s)	770
Zsp2I	ATGCAT	4 cut(s)	55, 159, 491, 500

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.