AT4G00020

Protein BREAST CANCER SUSCEPTIBILITY 2 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0004075
Physical Location & Seq
Reverse (-)
2895 .. 10504
7610 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G00020.3

Sequence Viewer

Length: 3456 bp
ATGTCGACGTGGCAATTATTTCCCGATTCCAGCGGCGATGGTTTCCGGTGGGAAGTCGCTGGCCGGATTCTTCAGTCCGTCTCGGATTCTACGCCAACCAAGGCGCTCGAATCGACAGCTCCTCTACCTTCTATGGCCGATCTCTTGCTCCAAGGATGCTCGAAGCTTATAGCACGGGAAGAAGCGATGCCTGGGGAAATCCCAATGTTCAGGACTGGGCTAGGGAAGTCTGTAGTTCTTAAAGAGTCTTCGATTGCTAAAGCCAAATCCATTTTAGCAGAGAAGGTTACTTACTCAGATTTGCGGAACACAAATTGCTCAATTCCCCAAATGAGACAAGTGGATACAGCTGAAACTTTGCCAATGTTCAGGACGGCCTCGGGGAAATCTGTCCCTTTGAAAGAGTCTTCAATTGCCAAAGCTATGTCTATTCTAGGAAGTGATAAGATTATTGACTCAGACAACGTTCTTCCCAGGGAGAGTGGATTTGGAGTTTCCAACAGTCTTTTTCAGACAGCTTCCAACAAAAAGGTTAATGTATCTTCTGCCGGTTTAGCAAGGGCCAAGGCATTGTTAGGACTAGAAGAAGATGATTTGAATGGATTTAACCATGTGAACCAGTCGTCTTCTTCCTCCCAGCAACATGGGTGGTCCGGATTAAAAACTCATGAGGAGTTTGATGCTACAGTAGTTAAGCATCATTCAGGAACTCCAGGACAATATGAGGATTATGTATCTGGGAAGAGATCTGAAGTCTTAAATCCATCTTTAAAGGTGCCTCCAACAAAGTTTCAGACTGCTGGTGGAAAATCATTGTCAGTGTCAGCTGAGGCGTTAAAACGTGCCAGAAACCTTCTTGGTGACCCTGAATTAGGGTCTTTCTTTGATGATGTAGCTGGAGGTGATCAATTTTTTACACCAGAGAAAGATGAAAGGTTAAGTGATATTGCTATAAACAATGGAAGTGCCAACAGAGGTTATATTGCTCATGAAGAAAAGACAAGCAACAAACATACGCCAAATAGTTTTGTATCTCCTCTTTGGTCATCTTCAAAGCAATTTAGTTCAGTCAACTTGGAGAACCTAGCTTCAGGGGGTAATTTGATCAAGAAATTTGATGCGGCTGTTGATGAGACCGATTGTGCTCTGAATGCTACACATGGACTATCAAATAACAGGTCTTTGGCATCAGATATGGCAGTGAATAATTCCAAGGTAAACGGTTTCATTCCAAGAGGTAGGCAACCTGGAAGGCCTGCTGATCAGCCACTTGTTGATATAACAAATCGCAGAGATACAGCTTATGCATACAATAAACAAGACAGTACCCAAAAGAAAAGGCTGGGAAAGACAGTCTCCGTTTCTCCTTTCAAAAGGCCAAGGATTTCATCCTTTAAAACTCCTTCAAAGAAACATGCTCTGCAAGCTTCAAGTGGTTTGTCTGTTGTATCGTGTGATACACTTACTTCCAAAAAGGTGCTTTCTACAAGGTATCCAGAAAAGTCTCCAAGAGTATATATCAAGGACTTTTTTGGAATGCATCCAACAGCTACGACCAGGATGGATTATGTGCCAGACCATGTCAGAAGAATCAAATCAAGTAATGCAGATAAATATGTATTCTGTGATGAGTCTTCTTCAAACAAGGTTGGAGCTGAAACTTTTCTTCAAATGTTGGCTGAGTCTGGTGCTTCCTTACAACATGCATCCAGAAAGTGGGTCACTAATCACTATAGGTGGATAGTCTGGAAACTTGCATGCTACGACATATACTACCCAGCCAAATGCAGAGGAAACTTTCTGACAATCACCAATGTTCTTGAGGAACTAAAATACAGATATGAGAGAGAGGTCAATCATGGTCATTGCTCTGCAATCAAGAGGATTCTGAGTGGTGATGCTCCAGCTTCTTCAATGATGGTGCTCTGCATATCAGCTATTAATCCAAAGACCGATAATGATTCTCAGGAAGCACATTGTTCTGATAGTTGCAGCAATGTGAAAGTAGAACTCACTGATGGGTGGTACTCGATGAATGCTGCTCTGGATGTCGTACTAACAAAGCAGCTGAATGCTGGCAAATTGTTTGTCGGGCAGAAGCTTCGAATCCTCGGGGCAGGACTTTCTGGCTGGGCTACCCCAACATCACCACTTGAGGCAGTGATTTCAAGTACAATCTGTTTGTTGTTGAATATTAATGGGACATACAGAGCTCACTGGGCGGACCGACTAGGCTTCTGTAAAGAAATTGGTGTCCCTCTGGCTTTAAATTGTATCAAGTGCAATGGGGGTCCAGTGCCTAAAACGCTAGCTGGCATCAAACGAATATACCCCATCCTATACAAGGAAAGGTTAGGTGAAAAGAAGTCAATAGTTCGATCAGAGAGAATAGAAAGTAGAATTATACAGCTGCATAATCAGAGGCGCTCAGCTCTTGTTGAGGGTATTATGTGTGAGTACCAGAGAGGAATTAATGGTGTTCACAGCCAGAACGACACTGACAGCGAAGAAGGAGCCAAGATCTTTAAGCTGTTAGAGACGGCTGCTGAACCTGAATTTCTTATGGCAGAAATGAGCCCAGAGCAGTTGAGATCTTTCACTACATATAAAGCAAAATTTGAGGCAGCCCAGCAAATGCGGAAGGAAAAATCAGTGGCAGAAACTCTGGAAGACGCTGGTTTAGGTGAAAGGAACGTCACCCCGTTCATGAGGATTAGGCTTGTTGGCCTGACGAGCTTAAGTTATGAAGGAGAGCACAATCCAAAAGAAGGCATTGTAACAATCTGGGATCCCACGGAGAGACAGAGAACCGAGCTGACAGAGGGGAAAATATACATGATGAAAGGGCTAGTACCAATAAACTCAGATTCAGAAATACTTTACTTACATGCGAGAGGGTCAAGCTCAAGATGGCAGCCTTTGTCTCCTAAAGATTCTGAAAATTTTCAGCCCTTTTTCAACCCTCGTAAACCAATCTCTTTGTCAAATCTTGGTGAAATTCCTCTTTCAAGTGAATTTGATATCGCTGCGTACGTTGTATATGTTGGAAATGCATACACGGATGTTCTACAAAAGAAGCAGTGGGTGTTTGTGACAGATGGATCCGCACAACATTCAGGGGAAATCTCAAACAGTCTTCTTGCTATAAGCTTCAGCACCTCATTCATGGATGATAGCTCTGTTTCCCACATCAGCCATAATTTGGTTGGATCCGTGGTCGGATTTTGCAATCTAATTAAAAGAGCAAAGGATGTGACAAACGAAATTTGGGTTGCTGAGGCAGCAGAGAACTCAGTCTACTTCATAAACGCAGAAGCTGCCTACTCTTCTCACCTCAAAACCAGCAGTGCCCATATCCAAACATGGGCTAAGCTCTCTTCTTCCAAATCCGTCATTCATGAACTTCGGCAAAGAGTCTTATCTATAATCGGTGCTTGTAAATCACCTTCATGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000228 GO:0000278 GO:0000280 GO:0000281 GO:0000722 GO:0000723 GO:0000724 GO:0000725 GO:0000781 GO:0000784 GO:0000793 GO:0000794 GO:0000795 GO:0000800 GO:0000910 GO:0001556 GO:0001701 GO:0001824 GO:0001832 GO:0001833 GO:0002020 GO:0002376 GO:0002520 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0004402 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005739 GO:0005813 GO:0005815 GO:0005829 GO:0005856 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006281 GO:0006289 GO:0006302 GO:0006310 GO:0006312 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006974 GO:0006978 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007059 GO:0007098 GO:0007127 GO:0007140 GO:0007141 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0007281 GO:0007283 GO:0007292 GO:0007346 GO:0007399 GO:0007417 GO:0007420 GO:0007548 GO:0007568 GO:0007569 GO:0008022 GO:0008080 GO:0008092 GO:0008104 GO:0008150 GO:0008152 GO:0008156 GO:0008219 GO:0008283 GO:0008285 GO:0008406 GO:0008585 GO:0008608 GO:0008630 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009790 GO:0009792 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0009994 GO:0010165 GO:0010212 GO:0010225 GO:0010332 GO:0010468 GO:0010484 GO:0010485 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0012501 GO:0012505 GO:0015630 GO:0015631 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019953 GO:0021700 GO:0022402 GO:0022412 GO:0022414 GO:0023052 GO:0030097 GO:0030141 GO:0030154 GO:0030330 GO:0030879 GO:0031023 GO:0031297 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031410 GO:0031619 GO:0031974 GO:0031981 GO:0031982 GO:0032200 GO:0032465 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033036 GO:0033260 GO:0033365 GO:0033554 GO:0033593 GO:0033599 GO:0033600 GO:0034212 GO:0034502 GO:0034613 GO:0034641 GO:0034645 GO:0035264 GO:0035556 GO:0036211 GO:0040007 GO:0042127 GO:0042592 GO:0042770 GO:0042771 GO:0042772 GO:0042802 GO:0043009 GO:0043015 GO:0043060 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0043967 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0044703 GO:0044786 GO:0045005 GO:0045132 GO:0045137 GO:0045143 GO:0045184 GO:0045787 GO:0045893 GO:0045931 GO:0045934 GO:0045935 GO:0046483 GO:0046545 GO:0046660 GO:0048232 GO:0048285 GO:0048468 GO:0048469 GO:0048477 GO:0048478 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048534 GO:0048589 GO:0048599 GO:0048608 GO:0048609 GO:0048731 GO:0048732 GO:0048856 GO:0048869 GO:0050000 GO:0050678 GO:0050680 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051093 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0051252 GO:0051254 GO:0051276 GO:0051298 GO:0051301 GO:0051302 GO:0051303 GO:0051310 GO:0051311 GO:0051316 GO:0051321 GO:0051455 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051704 GO:0051716 GO:0051726 GO:0060249 GO:0060255 GO:0060322 GO:0061458 GO:0061640 GO:0061733 GO:0061982 GO:0065007 GO:0065008 GO:0070013 GO:0070198 GO:0070199 GO:0070200 GO:0070727 GO:0071695 GO:0071704 GO:0071840 GO:0072331 GO:0072332 GO:0072594 GO:0080090 GO:0090304 GO:0090329 GO:0097159 GO:0097190 GO:0097193 GO:0097708 GO:0098687 GO:0098813 GO:0099086 GO:0099503 GO:0140013 GO:1901360 GO:1901363 GO:1901564 GO:1901576 GO:1902298 GO:1902680 GO:1902969 GO:1903046 GO:1903047 GO:1903506 GO:1903508 GO:1990426 GO:1990505 GO:2000026 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03440 ko03460 ko05200 ko05212 ko05224 map03440 map03460 map05200 map05212 map05224
Pfam Domains
Protein Families
BRCA-2_OB1 BRCA-2_helical BRCA2

Protein Analysis

1151

Amino Acids

126.65

Weight (kDa)

8.77

Isoelectric Point (pI)

42.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCA2 PF00634 122 - 145 1.8e-06 BRCA2 repeat
BRCA2 PF00634 166 - 193 4.2e-08 BRCA2 repeat
BRCA2 PF00634 261 - 288 7.3e-09 BRCA2 repeat
BRCA-2_helical PF09169 546 - 620 5.7e-16 BRCA2, helical
BRCA-2_OB1 PF09103 624 - 748 1.5e-38 BRCA2, oligonucleotide/oligosaccharide-binding, domain 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 775
AccB7I CCANNNNNTGG 2 cut(s) 1716, 3202
AccI GTMKAC 2 cut(s) 5, 3297
AccIII TCCGGA 1 cut(s) 653
AciI CCGC 6 cut(s) 33, 304, 1121, 2222, 2638, 3105
AclI AACGTT 1 cut(s) 465
AclWI GGATC 6 cut(s) 2783, 2796, 3096, 3109, 3204, 3217
AcoI YGGCCR 2 cut(s) 61, 135
AcsI RAATTY 7 cut(s) 1112, 2555, 2615, 2941, 2997, 3014, 3264
AcuI CTGAAG 4 cut(s) 56, 771, 1074, 3136
AfaI GTAC 7 cut(s) 1327, 2027, 2055, 2173, 2459, 2853, 3032
AfiI CCNNNNNNNGG 6 cut(s) 872, 1716, 2344, 2768, 3202, 3364
AflII CTTAAG 1 cut(s) 2737
AjiI CACGTC 1 cut(s) 9
AjnI CCWGG 5 cut(s) 190, 473, 712, 1246, 1556
Alw21I GWGCWC 4 cut(s) 1147, 1926, 2215, 2757
Alw26I GTCTC 8 cut(s) 85, 328, 1127, 1360, 1509, 2531, 2794, 2928
AlwI GGATC 6 cut(s) 2783, 2796, 3096, 3109, 3204, 3217
AlwNI CAGNNNCTG 1 cut(s) 3317
Ama87I CYCGRG 2 cut(s) 379, 2111
Aor13HI TCCGGA 1 cut(s) 653
AoxI GGCC 7 cut(s) 61, 135, 375, 561, 1253, 1376, 2725
ApoI RAATTY 7 cut(s) 1112, 2555, 2615, 2941, 2997, 3014, 3264
ArsI GACNNNNNNTTYG 4 cut(s) 1163, 1195, 2073, 2105
AseI ATTAAT 3 cut(s) 1941, 2196, 2472
Asp700I GAANNNNTTC 2 cut(s) 1662, 2943
AspLEI GCGC 2 cut(s) 106, 2427
AspS9I GGNCC 4 cut(s) 561, 651, 2224, 2291
AsuII TTCGAA 1 cut(s) 2104
AsuNHI GCTAGC 1 cut(s) 2308
AvaI CYCGRG 2 cut(s) 379, 2111
AvaII GGWCC 3 cut(s) 651, 2224, 2291
BaeGI GKGCMC 1 cut(s) 3352
BamHI GGATCC 3 cut(s) 2788, 3101, 3209
BanI GGYRCC 1 cut(s) 775
BanII GRGCYC 2 cut(s) 2215, 2579
BarI GAAGNNNNNNTAC 3 cut(s) 275, 307, 3430
BbsI GAAGAC 6 cut(s) 240, 399, 618, 1626, 2676, 3128
Bbv12I GWGCWC 4 cut(s) 1147, 1926, 2215, 2757
BbvCI CCTCAGC 2 cut(s) 828, 3276
BccI CCATC 8 cut(s) 32, 772, 1555, 1912, 2012, 2342, 2904, 3092
BceAI ACGGC 2 cut(s) 390, 2556
BcgI CGANNNNNNTGC 2 cut(s) 2084, 2118
BciT130I CCWGG 5 cut(s) 192, 475, 714, 1248, 1558
BciVI GTATCC 2 cut(s) 337, 1503
BclI TGATCA 3 cut(s) 904, 1104, 1261
BcoDI GTCTC 8 cut(s) 85, 328, 1127, 1360, 1509, 2531, 2794, 2928
BfaI CTAG 7 cut(s) 221, 434, 581, 1085, 2231, 2309, 2849
BfmI CTRYAG 3 cut(s) 231, 684, 1732
BfoI RGCGCY 2 cut(s) 107, 2428
BfrI CTTAAG 1 cut(s) 2737
BfuI GTATCC 2 cut(s) 337, 1503
BglII AGATCT 3 cut(s) 746, 2520, 2591
BlpI GCTNAGC 2 cut(s) 2428, 3369
Bme1390I CCNGG 5 cut(s) 192, 475, 714, 1248, 1558
Bme18I GGWCC 3 cut(s) 651, 2224, 2291
BmeT110I CYCGRG 2 cut(s) 379, 2111
BmgBI CACGTC 1 cut(s) 9
BmgT120I GGNCC 4 cut(s) 561, 651, 2224, 2291
BmiI GGNNCC 6 cut(s) 777, 2292, 2515, 2790, 3103, 3211
BmrFI CCNGG 5 cut(s) 192, 475, 714, 1248, 1558
BmrI ACTGGG 2 cut(s) 225, 2227
BmtI GCTAGC 1 cut(s) 2312
BmuI ACTGGG 2 cut(s) 225, 2227
BpiI GAAGAC 6 cut(s) 240, 399, 618, 1626, 2676, 3128
BpmI CTGGAG 3 cut(s) 696, 918, 1887
Bpu10I CCTNAGC 2 cut(s) 828, 3276
Bpu1102I GCTNAGC 2 cut(s) 2428, 3369
Bpu14I TTCGAA 1 cut(s) 2104
BpuEI CTTGAG 3 cut(s) 1841, 2174, 2890
BsaI GGTCTC 1 cut(s) 1127
BsaWI WCCGGW 2 cut(s) 45, 653
Bsc4I CCNNNNNNNGG 6 cut(s) 872, 1716, 2344, 2768, 3202, 3364
Bse118I RCCGGY 1 cut(s) 548
Bse1I ACTGG 4 cut(s) 220, 619, 2222, 2294
Bse3DI GCAATG 3 cut(s) 1864, 2002, 2290
BseAI TCCGGA 1 cut(s) 653
BseBI CCWGG 5 cut(s) 192, 475, 714, 1248, 1558
BseLI CCNNNNNNNGG 6 cut(s) 872, 1716, 2344, 2768, 3202, 3364
BseMI GCAATG 3 cut(s) 1864, 2002, 2290
BseNI ACTGG 4 cut(s) 220, 619, 2222, 2294
BseRI GAGGAG 3 cut(s) 111, 686, 1026
BseSI GKGCMC 1 cut(s) 3352
BseYI CCCAGC 5 cut(s) 636, 1342, 1777, 2130, 2628
BshFI GGCC 7 cut(s) 63, 137, 377, 563, 1255, 1378, 2727
BshNI GGYRCC 1 cut(s) 775
BsiHKAI GWGCWC 4 cut(s) 1147, 1926, 2215, 2757
BsiHKCI CYCGRG 2 cut(s) 379, 2111
BsiSI CCGG 4 cut(s) 46, 64, 549, 654
BsiWI CGTACG 1 cut(s) 3030
BslFI GGGAC 3 cut(s) 377, 2215, 2240
BslI CCNNNNNNNGG 6 cut(s) 872, 1716, 2344, 2768, 3202, 3364
BsmAI GTCTC 8 cut(s) 85, 328, 1127, 1360, 1509, 2531, 2794, 2928
BsmBI CGTCTC 2 cut(s) 85, 2531
BsmFI GGGAC 3 cut(s) 377, 2215, 2240
BsmI GAATGC 4 cut(s) 1156, 1542, 2041, 2077
BsnI GGCC 7 cut(s) 63, 137, 377, 563, 1255, 1378, 2727
Bso31I GGTCTC 1 cut(s) 1127
BsoBI CYCGRG 2 cut(s) 379, 2111
Bsp119I TTCGAA 1 cut(s) 2104
Bsp1286I GDGCHC 6 cut(s) 1147, 1926, 2215, 2579, 2757, 3352
Bsp13I TCCGGA 1 cut(s) 653
Bsp1720I GCTNAGC 2 cut(s) 2428, 3369
BspACI CCGC 6 cut(s) 33, 304, 1121, 2222, 2638, 3105
BspANI GGCC 7 cut(s) 63, 137, 377, 563, 1255, 1378, 2727
BspEI TCCGGA 1 cut(s) 653
BspHI TCATGA 4 cut(s) 667, 988, 2706, 3397
BspLI GGNNCC 6 cut(s) 777, 2292, 2515, 2790, 3103, 3211
BspOI GCTAGC 1 cut(s) 2312
BspPI GGATC 6 cut(s) 2783, 2796, 3096, 3109, 3204, 3217
BspT104I TTCGAA 1 cut(s) 2104
BspT107I GGYRCC 1 cut(s) 775
BspTI CTTAAG 1 cut(s) 2737
BspTNI GGTCTC 1 cut(s) 1127
BsrDI GCAATG 3 cut(s) 1864, 2002, 2290
BsrFI RCCGGY 1 cut(s) 548
BsrI ACTGG 4 cut(s) 220, 619, 2222, 2294
BssAI RCCGGY 1 cut(s) 548
BssT1I CCWWGG 5 cut(s) 99, 151, 564, 1212, 1379
Bst2UI CCWGG 5 cut(s) 192, 475, 714, 1248, 1558
Bst4CI ACNGT 6 cut(s) 503, 688, 1223, 1325, 1354, 3134
Bst6I CTCTTC 3 cut(s) 737, 3331, 3382
BstAFI CTTAAG 1 cut(s) 2737
BstAPI GCANNNNNTGC 1 cut(s) 3317
BstBI TTCGAA 1 cut(s) 2104
BstC8I GCNNGC 7 cut(s) 61, 1257, 1425, 1759, 2077, 2310, 2314
BstDSI CCRYGG 2 cut(s) 2793, 3213
BstEII GGTNACC 1 cut(s) 860
BstENI CCTNNNNNAGG 2 cut(s) 870, 2342
BstH2I RGCGCY 2 cut(s) 107, 2428
BstHHI GCGC 2 cut(s) 106, 2427
BstMAI GTCTC 8 cut(s) 85, 328, 1127, 1360, 1509, 2531, 2794, 2928
BstMWI GCNNNNNNNGC 8 cut(s) 554, 1151, 1424, 2219, 2305, 2733, 3281, 3317
BstNI CCWGG 5 cut(s) 192, 475, 714, 1248, 1558
BstNSI RCATGY 4 cut(s) 1418, 1706, 1761, 2891
BstPI GGTNACC 1 cut(s) 860
BstSCI CCNGG 5 cut(s) 190, 473, 712, 1246, 1556
BstSFI CTRYAG 3 cut(s) 231, 684, 1732
BstSLI GKGCMC 1 cut(s) 3352
BstV2I GAAGAC 6 cut(s) 240, 399, 618, 1626, 2676, 3128
BstX2I RGATCY 6 cut(s) 746, 2520, 2591, 2788, 3101, 3209
BstXI CCANNNNNNTGG 1 cut(s) 644
BstYI RGATCY 6 cut(s) 746, 2520, 2591, 2788, 3101, 3209
BsuI GTATCC 2 cut(s) 337, 1503
BsuRI GGCC 7 cut(s) 63, 137, 377, 563, 1255, 1378, 2727
BtgI CCRYGG 2 cut(s) 2793, 3213
BtgZI GCGATG 2 cut(s) 51, 200
BtrI CACGTC 1 cut(s) 9
BtsI GCAGTG 4 cut(s) 1206, 2166, 3086, 3352
Cac8I GCNNGC 7 cut(s) 61, 1257, 1425, 1759, 2077, 2310, 2314
CaiI CAGNNNCTG 1 cut(s) 3317
CciI TCATGA 4 cut(s) 667, 988, 2706, 3397
CfoI GCGC 2 cut(s) 106, 2427
Cfr10I RCCGGY 1 cut(s) 548
Cfr13I GGNCC 4 cut(s) 561, 651, 2224, 2291
CpoI CGGWCCG 1 cut(s) 2224
CseI GACGC 1 cut(s) 2681
Csp6I GTAC 7 cut(s) 1326, 2026, 2054, 2172, 2458, 2852, 3031
CspCI CAANNNNNGTGG 2 cut(s) 629, 664
CspI CGGWCCG 1 cut(s) 2224
CviQI GTAC 7 cut(s) 1326, 2026, 2054, 2172, 2458, 2852, 3031
DraI TTTAAA 3 cut(s) 771, 1396, 2268
EaeI YGGCCR 2 cut(s) 61, 135
Eam1104I CTCTTC 3 cut(s) 737, 3331, 3382
EarI CTCTTC 3 cut(s) 737, 3331, 3382
EciI GGCGGA 1 cut(s) 2237
Ecl136II GAGCTC 1 cut(s) 2213
Eco130I CCWWGG 5 cut(s) 99, 151, 564, 1212, 1379
Eco147I AGGCCT 1 cut(s) 1255
Eco24I GRGCYC 2 cut(s) 2215, 2579
Eco31I GGTCTC 1 cut(s) 1127
Eco32I GATATC 1 cut(s) 3022
Eco47I GGWCC 3 cut(s) 651, 2224, 2291
Eco53kI GAGCTC 1 cut(s) 2213
Eco57I CTGAAG 4 cut(s) 56, 771, 1074, 3136
Eco88I CYCGRG 2 cut(s) 379, 2111
Eco91I GGTNACC 1 cut(s) 860
EcoICRI GAGCTC 1 cut(s) 2213
EcoNI CCTNNNNNAGG 2 cut(s) 870, 2342
EcoO65I GGTNACC 1 cut(s) 860
EcoRII CCWGG 5 cut(s) 190, 473, 712, 1246, 1556
EcoRV GATATC 1 cut(s) 3022
EcoT14I CCWWGG 5 cut(s) 99, 151, 564, 1212, 1379
EcoT22I ATGCAT 4 cut(s) 1309, 1542, 1708, 3055
EcoT38I GRGCYC 2 cut(s) 2215, 2579
ErhI CCWWGG 5 cut(s) 99, 151, 564, 1212, 1379
Esp3I CGTCTC 2 cut(s) 85, 2531
FaqI GGGAC 3 cut(s) 377, 2215, 2240
FbaI TGATCA 3 cut(s) 904, 1104, 1261
FblI GTMKAC 2 cut(s) 5, 3297
FriOI GRGCYC 2 cut(s) 2215, 2579
FspBI CTAG 7 cut(s) 221, 434, 581, 1085, 2231, 2309, 2849
GlaI GCGC 2 cut(s) 105, 2426
GsaI CCCAGC 5 cut(s) 640, 1346, 1781, 2134, 2632
GsuI CTGGAG 3 cut(s) 696, 918, 1887
HaeII RGCGCY 2 cut(s) 107, 2428
HaeIII GGCC 7 cut(s) 63, 137, 377, 563, 1255, 1378, 2727
HapII CCGG 4 cut(s) 46, 64, 549, 654
HgaI GACGC 1 cut(s) 2681
HhaI GCGC 2 cut(s) 106, 2427
Hin6I GCGC 2 cut(s) 104, 2425
HinP1I GCGC 2 cut(s) 104, 2425
HincII GTYRAC 2 cut(s) 6, 1072
HindII GTYRAC 2 cut(s) 6, 1072
HindIII AAGCTT 4 cut(s) 164, 1425, 2099, 3148
HpaII CCGG 4 cut(s) 46, 64, 549, 654
Hpy166II GTNNAC 7 cut(s) 6, 616, 1072, 1219, 2482, 2969, 3298
Hpy8I GTNNAC 7 cut(s) 6, 616, 1072, 1219, 2482, 2969, 3298
Hpy99I CGWCG 1 cut(s) 10
HpyCH4III ACNGT 6 cut(s) 503, 688, 1223, 1325, 1354, 3134
HpyCH4IV ACGT 5 cut(s) 8, 465, 841, 2694, 3033
HpyF10VI GCNNNNNNNGC 8 cut(s) 554, 1151, 1424, 2219, 2305, 2733, 3281, 3317
HpySE526I ACGT 5 cut(s) 8, 465, 841, 2694, 3033
HspAI GCGC 2 cut(s) 104, 2425
Kpn2I TCCGGA 1 cut(s) 653
Ksp22I TGATCA 3 cut(s) 904, 1104, 1261
LmnI GCTCC 5 cut(s) 124, 153, 1652, 1906, 2513
MaeI CTAG 7 cut(s) 221, 434, 581, 1085, 2231, 2309, 2849
MaeII ACGT 5 cut(s) 8, 465, 841, 2694, 3033
MaeIII GTNAC 7 cut(s) 286, 860, 1720, 2695, 2776, 3091, 3253
MfeI CAATTG 1 cut(s) 411
MflI RGATCY 6 cut(s) 746, 2520, 2591, 2788, 3101, 3209
MhlI GDGCHC 6 cut(s) 1147, 1926, 2215, 2579, 2757, 3352
MlyI GAGTC 6 cut(s) 254, 413, 449, 1640, 1691, 3423
MmeI TCCRAC 8 cut(s) 522, 546, 806, 1568, 1630, 3025, 3187, 3199
Mph1103I ATGCAT 4 cut(s) 1309, 1542, 1708, 3055
MroI TCCGGA 1 cut(s) 653
MroXI GAANNNNTTC 2 cut(s) 1662, 2943
MslI CAYNNNNRTG 1 cut(s) 3448
MspA1I CMGCKG 5 cut(s) 33, 350, 827, 2068, 2410
MspCI CTTAAG 1 cut(s) 2737
MspI CCGG 4 cut(s) 46, 64, 549, 654
MspR9I CCNGG 5 cut(s) 192, 475, 714, 1248, 1558
MunI CAATTG 1 cut(s) 411
Mva1269I GAATGC 4 cut(s) 1156, 1542, 2041, 2077
MvaI CCWGG 5 cut(s) 192, 475, 714, 1248, 1558
MwoI GCNNNNNNNGC 8 cut(s) 554, 1151, 1424, 2219, 2305, 2733, 3281, 3317
NheI GCTAGC 1 cut(s) 2308
NlaIV GGNNCC 6 cut(s) 777, 2292, 2515, 2790, 3103, 3211
NmuCI GTSAC 5 cut(s) 860, 1720, 2695, 3091, 3253
NsiI ATGCAT 4 cut(s) 1309, 1542, 1708, 3055
NspI RCATGY 4 cut(s) 1418, 1706, 1761, 2891
NspV TTCGAA 1 cut(s) 2104
PaeI GCATGC 1 cut(s) 1761
PagI TCATGA 4 cut(s) 667, 988, 2706, 3397
PasI CCCWGGG 1 cut(s) 474
PceI AGGCCT 1 cut(s) 1255
PcsI WCGNNNNNNNCGW 1 cut(s) 3030
PctI GAATGC 4 cut(s) 1156, 1542, 2041, 2077
PdmI GAANNNNTTC 2 cut(s) 1662, 2943
Pfl23II CGTACG 1 cut(s) 3030
PflFI GACNNNGTC 1 cut(s) 1580
PflMI CCANNNNNTGG 2 cut(s) 1716, 3202
PfoI TCCNGGA 1 cut(s) 712
PleI GAGTC 6 cut(s) 253, 412, 449, 1639, 1690, 3422
PpsI GAGTC 6 cut(s) 253, 412, 449, 1639, 1690, 3422
PshBI ATTAAT 3 cut(s) 1941, 2196, 2472
Psp124BI GAGCTC 1 cut(s) 2215
Psp1406I AACGTT 1 cut(s) 465
Psp6I CCWGG 5 cut(s) 190, 473, 712, 1246, 1556
PspEI GGTNACC 1 cut(s) 860
PspFI CCCAGC 5 cut(s) 636, 1342, 1777, 2130, 2628
PspGI CCWGG 5 cut(s) 190, 473, 712, 1246, 1556
PspLI CGTACG 1 cut(s) 3030
PspN4I GGNNCC 6 cut(s) 777, 2292, 2515, 2790, 3103, 3211
PspPI GGNCC 4 cut(s) 561, 651, 2224, 2291
PsrI GAACNNNNNNTAC 2 cut(s) 3281, 3313
PstNI CAGNNNCTG 1 cut(s) 3317
PsuI RGATCY 6 cut(s) 746, 2520, 2591, 2788, 3101, 3209
PsyI GACNNNGTC 1 cut(s) 1580
PvuII CAGCTG 4 cut(s) 350, 827, 2068, 2410
RsaI GTAC 7 cut(s) 1327, 2027, 2055, 2173, 2459, 2853, 3032
RsaNI GTAC 7 cut(s) 1326, 2026, 2054, 2172, 2458, 2852, 3031
RseI CAYNNNNRTG 1 cut(s) 3448
Rsr2I CGGWCCG 1 cut(s) 2224
RsrII CGGWCCG 1 cut(s) 2224
SacI GAGCTC 1 cut(s) 2215
SalI GTCGAC 1 cut(s) 4
Sau96I GGNCC 4 cut(s) 561, 651, 2224, 2291
SchI GAGTC 6 cut(s) 254, 413, 449, 1640, 1691, 3423
ScrFI CCNGG 5 cut(s) 192, 475, 714, 1248, 1558
SduI GDGCHC 6 cut(s) 1147, 1926, 2215, 2579, 2757, 3352
SfcI CTRYAG 3 cut(s) 231, 684, 1732
SfuI TTCGAA 1 cut(s) 2104
SinI GGWCC 3 cut(s) 651, 2224, 2291
SmiMI CAYNNNNRTG 1 cut(s) 3448
SmlI CTYRAG 4 cut(s) 1820, 2153, 2737, 2905
SmoI CTYRAG 4 cut(s) 1820, 2153, 2737, 2905
SphI GCATGC 1 cut(s) 1761
SseBI AGGCCT 1 cut(s) 1255
SsiI CCGC 6 cut(s) 33, 304, 1121, 2222, 2638, 3105
SspI AATATT 1 cut(s) 2194
SspMI CTAG 7 cut(s) 221, 434, 581, 1085, 2231, 2309, 2849
SstI GAGCTC 1 cut(s) 2215
StuI AGGCCT 1 cut(s) 1255
StyD4I CCNGG 5 cut(s) 190, 473, 712, 1246, 1556
StyI CCWWGG 5 cut(s) 99, 151, 564, 1212, 1379
TaaI ACNGT 6 cut(s) 503, 688, 1223, 1325, 1354, 3134
TaiI ACGT 5 cut(s) 11, 468, 844, 2697, 3036
TaqI TCGA 8 cut(s) 5, 108, 113, 161, 251, 2030, 2104, 2377
TaqII GACCGA 3 cut(s) 1151, 1967, 2241
TatI WGTACW 1 cut(s) 2171
TauI GCSGC 2 cut(s) 36, 1124
TseFI GTSAC 5 cut(s) 860, 1720, 2695, 3091, 3253
Tsp45I GTSAC 5 cut(s) 860, 1720, 2695, 3091, 3253
TspGWI ACGGA 6 cut(s) 67, 1348, 2810, 3074, 3202, 3379
Tth111I GACNNNGTC 1 cut(s) 1580
Van91I CCANNNNNTGG 2 cut(s) 1716, 3202
Vha464I CTTAAG 1 cut(s) 2737
VpaK11BI GGWCC 3 cut(s) 651, 2224, 2291
VspI ATTAAT 3 cut(s) 1941, 2196, 2472
XagI CCTNNNNNAGG 2 cut(s) 870, 2342
XapI RAATTY 7 cut(s) 1112, 2555, 2615, 2941, 2997, 3014, 3264
XceI RCATGY 4 cut(s) 1418, 1706, 1761, 2891
XcmI CCANNNNNNNNNTGG 1 cut(s) 3203
XmiI GTMKAC 2 cut(s) 5, 3297
XmnI GAANNNNTTC 2 cut(s) 1662, 2943
XspI CTAG 7 cut(s) 221, 434, 581, 1085, 2231, 2309, 2849
Zsp2I ATGCAT 4 cut(s) 1309, 1542, 1708, 3055
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.