Rw3G023660

BRCA2, oligonucleotide/oligosaccharide-binding, domain 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0004075
Physical Location & Seq
Reverse (-)
29706066 .. 29710751
4686 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G023660.1

Sequence Viewer

Length: 1917 bp
ATGTCTTTGAAGAAATATTTTGGAATGCCACCATCAGATCAAACCATGGTGGACTGCATGTCAGATCGGGTGAGAAGAGTTACAGCAATTAATGCAGAAAACTATATGTTTTCTGATGAATCTGGCTTAAACTACATAGGGGCAGAAGCTTTTGTCCACATGTTGGCTTCTTCCGGAGCCTCAACACAAAATACTTCCAGAGAGTGGGTCGTAAATCACTACAAGTGGATTGTCTGGAAACTGGCTTGTTATGAGAGATGCTATCCAGCTAAAACTTTAGGAAAATTTTTGACACTGCCCAATGTGCTTGAAGAATTGAAGTATAGATATGAAAGAGAAGTGAATCATGGTCACCGCTCTGCAATTAAGAAAATACTGGAAGGAGATGCATCACCTTCTTCGATGTTGGTCTTATGCATTTCAGCTATTCGCTCAAAACCTGACCCAAATATGGAGACTAGCTCCGGAGCTGAAAATAGTAGTGCCACAAAAGTTGAACTTACTGATGGGTGGTATTCAGTGGATGCTATTCTGGATGCTCTCCTATCAAAGCAGCTTGCTAGTGGAAAAATGTTTGTTGGACAGAAACTTCGGATTTGGGGAGCAGGACTCTGCGGCTGGGTTGGGCCTATTTCACCCCTCGAGGTGTCAAGAGAAGTTATGTTAAGGCTACACATAAATGGCACATATAGAGCTCATTGGGATGATCAATTGGGATTTTGCAACTGTGTTGGTGCTCCATTAGCATTTAAGTGCATCAAGAGCGATGGGGGTCCAGTTCCTTGGACTCTTGTAGGAGTCACAAGGATATTCCCTGTTTTATACAAAGAAAGGTTAAGTAATGGAAGATCTGTTGTGAGGTCGGAGAGGTTGGAGACCAAAATGATGCAATCATATAGCCAGAGGCGCTCTAATGTTATTGAGGGCATTATTTCTGAGTTCCAAAGAGGATTAGAACATTCGCATACATGTAATGAGAGAGATAGTGAAGGAGCAAAACTCTTGAGGATACTAGAGACAGCTGCTGAACCAGAAGTTTTAATGGCAGAGATGAGTACAGAACAATTGAATTCTTTTACCAAATATCGAGCAAAATTAGAGGCAATCAAGCAGTCAGACATGGAGAAATCAATTATGAAAGCACTAGAAGATGCTGGATTAGCTGAGAGGGAAGTGATGCCATTAATGAGGGTGAGGGTAGTTGGACTAACTAGAAACTTATATGAAGGAGAAGACAGTCCCAAAGAAGGCTTAATAACAATCTGGAACCCATCAGAGAACCAGAAGTCTGAGTTGGTCGAGGGGCAAGCATATACTGTTTCTGACCTTATACCAACAAATTCGGCTGCTATTCTATACTTGCTAGCAAGAGGATCCAAAACGAAATGGAAGCCTTTATGTCAGCAGGCAGCAGACCACTTTAAGCCCTTTTTTAGTCCTCGCAAATCAATAATATTGTCAGATTTTGGTCAAGTTCCTCTTTCCAGTGAATTTGATATTGCTGCATTCGTTGTGTTTGTGGGGGAGGTTTATGTCACTGGTCACCAGAAGAAACAATGGGTGTTTGTGACAGATGGCTCCATTTCTGAATCAAAGTCAGAAGAATTAAACGATTCTCTACTTGCCATCTGCTTCTGTTCACCGCATATCGATGATCAATCAGATGTTCCTATAAACTACAACCTCGCAGGTTCAACGGTCGGCTTTTGTAATCTTATCAAGAGAGCAAAGGACCAAATGAATGCTCTTTGGGTAGCTGATGCTACAGAAAACTCGGCATACTTTTTGAGTTTTGACTCTCCACATTGTTCACATCTCAAAGGTGCTGCTGCCTCTGCTGAAAGATGGGGAAGAATCTCTAGCTTGACCATCAGTAGGCTTAAGGAGAGGGTTCTGTTTATCATTGGTAAAGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000228 GO:0000278 GO:0000280 GO:0000281 GO:0000722 GO:0000723 GO:0000724 GO:0000725 GO:0000781 GO:0000784 GO:0000793 GO:0000794 GO:0000795 GO:0000800 GO:0000910 GO:0001556 GO:0001701 GO:0001824 GO:0001832 GO:0001833 GO:0002020 GO:0002376 GO:0002520 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0004402 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005739 GO:0005813 GO:0005815 GO:0005829 GO:0005856 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006281 GO:0006289 GO:0006302 GO:0006310 GO:0006312 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006974 GO:0006978 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007059 GO:0007098 GO:0007127 GO:0007140 GO:0007141 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0007281 GO:0007283 GO:0007292 GO:0007346 GO:0007399 GO:0007417 GO:0007420 GO:0007548 GO:0007568 GO:0007569 GO:0008022 GO:0008080 GO:0008092 GO:0008104 GO:0008150 GO:0008152 GO:0008156 GO:0008219 GO:0008283 GO:0008285 GO:0008406 GO:0008585 GO:0008608 GO:0008630 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009790 GO:0009792 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0009994 GO:0010165 GO:0010212 GO:0010225 GO:0010332 GO:0010468 GO:0010484 GO:0010485 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0012501 GO:0012505 GO:0015630 GO:0015631 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019953 GO:0021700 GO:0022402 GO:0022412 GO:0022414 GO:0023052 GO:0030097 GO:0030141 GO:0030154 GO:0030330 GO:0030879 GO:0031023 GO:0031297 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031410 GO:0031619 GO:0031974 GO:0031981 GO:0031982 GO:0032200 GO:0032465 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033036 GO:0033260 GO:0033365 GO:0033554 GO:0033593 GO:0033599 GO:0033600 GO:0034212 GO:0034502 GO:0034613 GO:0034641 GO:0034645 GO:0035264 GO:0035556 GO:0036211 GO:0040007 GO:0042127 GO:0042592 GO:0042770 GO:0042771 GO:0042772 GO:0042802 GO:0043009 GO:0043015 GO:0043060 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0043967 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0044703 GO:0044786 GO:0045005 GO:0045132 GO:0045137 GO:0045143 GO:0045184 GO:0045787 GO:0045893 GO:0045931 GO:0045934 GO:0045935 GO:0046483 GO:0046545 GO:0046660 GO:0048232 GO:0048285 GO:0048468 GO:0048469 GO:0048477 GO:0048478 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048534 GO:0048589 GO:0048599 GO:0048608 GO:0048609 GO:0048731 GO:0048732 GO:0048856 GO:0048869 GO:0050000 GO:0050678 GO:0050680 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051093 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0051252 GO:0051254 GO:0051276 GO:0051298 GO:0051301 GO:0051302 GO:0051303 GO:0051310 GO:0051311 GO:0051316 GO:0051321 GO:0051455 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051704 GO:0051716 GO:0051726 GO:0060249 GO:0060255 GO:0060322 GO:0061458 GO:0061640 GO:0061733 GO:0061982 GO:0065007 GO:0065008 GO:0070013 GO:0070198 GO:0070199 GO:0070200 GO:0070727 GO:0071695 GO:0071704 GO:0071840 GO:0072331 GO:0072332 GO:0072594 GO:0080090 GO:0090304 GO:0090329 GO:0097159 GO:0097190 GO:0097193 GO:0097708 GO:0098687 GO:0098813 GO:0099086 GO:0099503 GO:0140013 GO:1901360 GO:1901363 GO:1901564 GO:1901576 GO:1902298 GO:1902680 GO:1902969 GO:1903046 GO:1903047 GO:1903506 GO:1903508 GO:1990426 GO:1990505 GO:2000026 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03440 ko03460 ko05200 ko05212 ko05224 map03440 map03460 map05200 map05212 map05224
Pfam Domains
Protein Families
BRCA-2_OB1 BRCA-2_helical BRCA2

Protein Analysis

638

Amino Acids

71.27

Weight (kDa)

6.9

Isoelectric Point (pI)

38.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCA-2_helical PF09169 46 - 116 8.5e-17 BRCA2, helical
BRCA-2_OB1 PF09103 120 - 241 6.2e-41 BRCA2, oligonucleotide/oligosaccharide-binding, domain 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 641
Acc36I ACCTGC 1 cut(s) 1679
AccB7I CCANNNNNTGG 2 cut(s) 163, 204
AccBSI CCGCTC 1 cut(s) 357
AccIII TCCGGA 2 cut(s) 173, 464
AciI CCGC 3 cut(s) 355, 615, 1643
AclWI GGATC 2 cut(s) 1368, 1381
AcsI RAATTY 4 cut(s) 284, 1069, 1339, 1490
AfaI GTAC 1 cut(s) 1057
AfiI CCNNNNNNNGG 5 cut(s) 163, 204, 451, 1247, 1875
AflII CTTAAG 1 cut(s) 1880
AflIII ACRYGT 2 cut(s) 159, 968
AgsI TTSAA 6 cut(s) 10, 311, 319, 497, 1069, 1695
AhdI GACNNNNNGTC 1 cut(s) 58
AjuI GAANNNNNNNTTGG 2 cut(s) 1277, 1309
Alw21I GWGCWC 2 cut(s) 697, 739
Alw26I GTCTC 3 cut(s) 449, 869, 1010
AlwI GGATC 2 cut(s) 1368, 1381
AlwNI CAGNNNCTG 1 cut(s) 1025
Ama87I CYCGRG 1 cut(s) 641
Aor13HI TCCGGA 2 cut(s) 173, 464
AoxI GGCC 1 cut(s) 626
ApeKI GCWGC 7 cut(s) 553, 1022, 1346, 1409, 1502, 1826, 1829
ApoI RAATTY 4 cut(s) 284, 1069, 1339, 1490
ArsI GACNNNNNNTTYG 2 cut(s) 573, 605
AseI ATTAAT 2 cut(s) 90, 1184
AspLEI GCGC 1 cut(s) 909
AspS9I GGNCC 3 cut(s) 626, 773, 1732
AsuHPI GGTGA 7 cut(s) 82, 344, 384, 627, 1204, 1535, 1632
AsuNHI GCTAGC 1 cut(s) 1363
AvaI CYCGRG 1 cut(s) 641
AvaII GGWCC 2 cut(s) 773, 1732
BamHI GGATCC 1 cut(s) 1373
BanII GRGCYC 1 cut(s) 697
BbsI GAAGAC 1 cut(s) 1239
Bbv12I GWGCWC 2 cut(s) 697, 739
BbvI GCAGC 7 cut(s) 565, 1009, 1333, 1421, 1489, 1813, 1816
BccI CCATC 8 cut(s) 40, 500, 761, 1279, 1568, 1634, 1839, 1877
BciVI GTATCC 1 cut(s) 1002
BclI TGATCA 2 cut(s) 706, 1654
BcoDI GTCTC 3 cut(s) 449, 869, 1010
BfaI CTAG 7 cut(s) 459, 561, 1013, 1145, 1212, 1364, 1860
BfmI CTRYAG 1 cut(s) 1764
BfoI RGCGCY 1 cut(s) 910
BfrI CTTAAG 1 cut(s) 1880
BfuAI ACCTGC 1 cut(s) 1679
BfuI GTATCC 1 cut(s) 1002
BglII AGATCT 1 cut(s) 848
BisI GCNGC 8 cut(s) 554, 616, 1023, 1347, 1410, 1503, 1827, 1830
BlsI GCNGC 8 cut(s) 555, 617, 1024, 1348, 1411, 1504, 1828, 1831
Bme18I GGWCC 2 cut(s) 773, 1732
BmeRI GACNNNNNGTC 1 cut(s) 58
BmeT110I CYCGRG 1 cut(s) 641
BmgT120I GGNCC 3 cut(s) 626, 773, 1732
BmiI GGNNCC 5 cut(s) 178, 774, 1268, 1375, 1579
BmtI GCTAGC 1 cut(s) 1367
BpiI GAAGAC 1 cut(s) 1239
BplI GAGNNNNNCTC 6 cut(s) 446, 478, 594, 626, 984, 1016
BpuEI CTTGAG 1 cut(s) 1024
Bsa29I ATCGAT 1 cut(s) 1650
BsaI GGTCTC 1 cut(s) 869
BsaJI CCNNGG 2 cut(s) 45, 782
BsaWI WCCGGW 2 cut(s) 173, 464
Bsc4I CCNNNNNNNGG 5 cut(s) 163, 204, 451, 1247, 1875
Bse1I ACTGG 5 cut(s) 246, 381, 776, 1485, 1543
BseAI TCCGGA 2 cut(s) 173, 464
BseCI ATCGAT 1 cut(s) 1650
BseDI CCNNGG 2 cut(s) 45, 782
BseGI GGATG 3 cut(s) 529, 541, 709
BseLI CCNNNNNNNGG 5 cut(s) 163, 204, 451, 1247, 1875
BseMII CTCAG 3 cut(s) 927, 1155, 1281
BseNI ACTGG 5 cut(s) 246, 381, 776, 1485, 1543
BseXI GCAGC 7 cut(s) 565, 1009, 1333, 1421, 1489, 1813, 1816
BseYI CCCAGC 1 cut(s) 618
Bsh1285I CGRYCG 1 cut(s) 1701
BshFI GGCC 1 cut(s) 628
BshVI ATCGAT 1 cut(s) 1650
BsiEI CGRYCG 1 cut(s) 1701
BsiHKAI GWGCWC 2 cut(s) 697, 739
BsiHKCI CYCGRG 1 cut(s) 641
BsiSI CCGG 2 cut(s) 174, 465
BslFI GGGAC 1 cut(s) 1224
BslI CCNNNNNNNGG 5 cut(s) 163, 204, 451, 1247, 1875
BsmAI GTCTC 3 cut(s) 449, 869, 1010
BsmFI GGGAC 1 cut(s) 1224
BsmI GAATGC 3 cut(s) 30, 1505, 1747
BsnI GGCC 1 cut(s) 628
Bso31I GGTCTC 1 cut(s) 869
BsoBI CYCGRG 1 cut(s) 641
Bsp1286I GDGCHC 2 cut(s) 697, 739
Bsp13I TCCGGA 2 cut(s) 173, 464
Bsp143I GATC 6 cut(s) 37, 64, 706, 848, 1373, 1654
Bsp19I CCATGG 1 cut(s) 45
BspACI CCGC 3 cut(s) 355, 615, 1643
BspANI GGCC 1 cut(s) 628
BspCNI CTCAG 3 cut(s) 928, 1156, 1282
BspDI ATCGAT 1 cut(s) 1650
BspEI TCCGGA 2 cut(s) 173, 464
BspLI GGNNCC 5 cut(s) 178, 774, 1268, 1375, 1579
BspMI ACCTGC 1 cut(s) 1679
BspOI GCTAGC 1 cut(s) 1367
BspPI GGATC 2 cut(s) 1368, 1381
BspTI CTTAAG 1 cut(s) 1880
BspTNI GGTCTC 1 cut(s) 869
BsrBI CCGCTC 1 cut(s) 357
BsrI ACTGG 5 cut(s) 246, 381, 776, 1485, 1543
BssECI CCNNGG 2 cut(s) 45, 782
BssMI GATC 6 cut(s) 37, 64, 706, 848, 1373, 1654
BssT1I CCWWGG 2 cut(s) 45, 782
Bst4CI ACNGT 4 cut(s) 728, 1238, 1318, 1699
Bst6I CTCTTC 1 cut(s) 70
BstAFI CTTAAG 1 cut(s) 1880
BstAPI GCANNNNNTGC 1 cut(s) 92
BstC8I GCNNGC 4 cut(s) 558, 1308, 1365, 1407
BstDEI CTNAG 3 cut(s) 936, 1164, 1290
BstDSI CCRYGG 1 cut(s) 45
BstEII GGTNACC 2 cut(s) 350, 1541
BstF5I GGATG 3 cut(s) 529, 541, 709
BstH2I RGCGCY 1 cut(s) 910
BstHHI GCGC 1 cut(s) 909
BstKTI GATC 6 cut(s) 40, 67, 709, 851, 1376, 1657
BstMAI GTCTC 3 cut(s) 449, 869, 1010
BstMBI GATC 6 cut(s) 37, 64, 706, 848, 1373, 1654
BstMCI CGRYCG 1 cut(s) 1701
BstMWI GCNNNNNNNGC 7 cut(s) 92, 304, 743, 762, 906, 1160, 1835
BstNSI RCATGY 3 cut(s) 61, 163, 972
BstPI GGTNACC 2 cut(s) 350, 1541
BstSFI CTRYAG 1 cut(s) 1764
BstV1I GCAGC 7 cut(s) 565, 1009, 1333, 1421, 1489, 1813, 1816
BstV2I GAAGAC 1 cut(s) 1239
BstX2I RGATCY 2 cut(s) 848, 1373
BstXI CCANNNNNNTGG 1 cut(s) 783
BstYI RGATCY 2 cut(s) 848, 1373
Bsu15I ATCGAT 1 cut(s) 1650
BsuI GTATCC 1 cut(s) 1002
BsuRI GGCC 1 cut(s) 628
BsuTUI ATCGAT 1 cut(s) 1650
BtgI CCRYGG 1 cut(s) 45
BtgZI GCGATG 1 cut(s) 780
BtsCI GGATG 3 cut(s) 529, 541, 709
BtsI GCAGTG 1 cut(s) 293
BtsIMutI CAGTG 4 cut(s) 293, 525, 1492, 1536
BveI ACCTGC 1 cut(s) 1679
Cac8I GCNNGC 4 cut(s) 558, 1308, 1365, 1407
CaiI CAGNNNCTG 1 cut(s) 1025
CfoI GCGC 1 cut(s) 909
Cfr13I GGNCC 3 cut(s) 626, 773, 1732
ClaI ATCGAT 1 cut(s) 1650
Csp6I GTAC 1 cut(s) 1056
CspCI CAANNNNNGTGG 2 cut(s) 475, 510
CviAII CATG 6 cut(s) 46, 58, 160, 347, 969, 1120
CviQI GTAC 1 cut(s) 1056
DdeI CTNAG 3 cut(s) 936, 1164, 1290
DpnI GATC 6 cut(s) 39, 66, 708, 850, 1375, 1656
DpnII GATC 6 cut(s) 37, 64, 706, 848, 1373, 1654
DriI GACNNNNNGTC 1 cut(s) 58
Eam1104I CTCTTC 1 cut(s) 70
Eam1105I GACNNNNNGTC 1 cut(s) 58
EarI CTCTTC 1 cut(s) 70
Ecl136II GAGCTC 1 cut(s) 695
Eco130I CCWWGG 2 cut(s) 45, 782
Eco24I GRGCYC 1 cut(s) 697
Eco31I GGTCTC 1 cut(s) 869
Eco47I GGWCC 2 cut(s) 773, 1732
Eco53kI GAGCTC 1 cut(s) 695
Eco88I CYCGRG 1 cut(s) 641
Eco91I GGTNACC 2 cut(s) 350, 1541
EcoICRI GAGCTC 1 cut(s) 695
EcoO65I GGTNACC 2 cut(s) 350, 1541
EcoRI GAATTC 1 cut(s) 1069
EcoT14I CCWWGG 2 cut(s) 45, 782
EcoT22I ATGCAT 2 cut(s) 391, 419
EcoT38I GRGCYC 1 cut(s) 697
ErhI CCWWGG 2 cut(s) 45, 782
FaeI CATG 6 cut(s) 49, 61, 163, 350, 972, 1123
FalI AAGNNNNNCTT 4 cut(s) 483, 515, 1464, 1496
FaqI GGGAC 1 cut(s) 1224
FatI CATG 6 cut(s) 45, 57, 159, 346, 968, 1119
FbaI TGATCA 2 cut(s) 706, 1654
Fnu4HI GCNGC 8 cut(s) 554, 616, 1023, 1347, 1410, 1503, 1827, 1830
FokI GGATG 3 cut(s) 536, 548, 716
FriOI GRGCYC 1 cut(s) 697
Fsp4HI GCNGC 8 cut(s) 554, 616, 1023, 1347, 1410, 1503, 1827, 1830
FspBI CTAG 7 cut(s) 459, 561, 1013, 1145, 1212, 1364, 1860
GlaI GCGC 1 cut(s) 908
GluI GCNGC 8 cut(s) 554, 616, 1023, 1347, 1410, 1503, 1827, 1830
GsaI CCCAGC 1 cut(s) 622
HaeII RGCGCY 1 cut(s) 910
HaeIII GGCC 1 cut(s) 628
HapII CCGG 2 cut(s) 174, 465
HhaI GCGC 1 cut(s) 909
Hin1II CATG 6 cut(s) 49, 61, 163, 350, 972, 1123
Hin6I GCGC 1 cut(s) 907
HinP1I GCGC 1 cut(s) 907
HindIII AAGCTT 1 cut(s) 147
HinfI GANTC 9 cut(s) 119, 343, 609, 787, 798, 1589, 1613, 1796, 1854
HpaII CCGG 2 cut(s) 174, 465
HphI GGTGA 7 cut(s) 82, 344, 384, 627, 1204, 1535, 1632
Hpy166II GTNNAC 4 cut(s) 52, 157, 1640, 1811
Hpy8I GTNNAC 4 cut(s) 52, 157, 1640, 1811
HpyAV CCTTC 5 cut(s) 374, 405, 983, 1220, 1241
HpyCH4III ACNGT 4 cut(s) 728, 1238, 1318, 1699
HpyCH4V TGCA 9 cut(s) 57, 95, 362, 389, 417, 723, 756, 889, 1505
HpyF10VI GCNNNNNNNGC 7 cut(s) 92, 304, 743, 762, 906, 1160, 1835
HpyF3I CTNAG 3 cut(s) 936, 1164, 1290
Hsp92II CATG 6 cut(s) 49, 61, 163, 350, 972, 1123
HspAI GCGC 1 cut(s) 907
Kpn2I TCCGGA 2 cut(s) 173, 464
Ksp22I TGATCA 2 cut(s) 706, 1654
Kzo9I GATC 6 cut(s) 37, 64, 706, 848, 1373, 1654
LmnI GCTCC 7 cut(s) 176, 467, 467, 602, 742, 992, 1583
Lsp1109I GCAGC 7 cut(s) 565, 1009, 1333, 1421, 1489, 1813, 1816
MaeI CTAG 7 cut(s) 459, 561, 1013, 1145, 1212, 1364, 1860
MaeIII GTNAC 6 cut(s) 79, 350, 799, 1534, 1541, 1567
MalI GATC 6 cut(s) 39, 66, 708, 850, 1375, 1656
MbiI CCGCTC 1 cut(s) 357
MboI GATC 6 cut(s) 37, 64, 706, 848, 1373, 1654
MfeI CAATTG 2 cut(s) 710, 1064
MflI RGATCY 2 cut(s) 848, 1373
MhlI GDGCHC 2 cut(s) 697, 739
MlyI GAGTC 4 cut(s) 603, 781, 807, 1790
MmeI TCCRAC 4 cut(s) 559, 843, 852, 1183
Mph1103I ATGCAT 2 cut(s) 391, 419
MroI TCCGGA 2 cut(s) 173, 464
MslI CAYNNNNRTG 4 cut(s) 678, 702, 751, 1650
MspA1I CMGCKG 1 cut(s) 1022
MspCI CTTAAG 1 cut(s) 1880
MspI CCGG 2 cut(s) 174, 465
MunI CAATTG 2 cut(s) 710, 1064
Mva1269I GAATGC 3 cut(s) 30, 1505, 1747
MwoI GCNNNNNNNGC 7 cut(s) 92, 304, 743, 762, 906, 1160, 1835
NcoI CCATGG 1 cut(s) 45
NdeII GATC 6 cut(s) 37, 64, 706, 848, 1373, 1654
NheI GCTAGC 1 cut(s) 1363
NlaIII CATG 6 cut(s) 49, 61, 163, 350, 972, 1123
NlaIV GGNNCC 5 cut(s) 178, 774, 1268, 1375, 1579
NmeAIII GCCGAG 1 cut(s) 1754
NmuCI GTSAC 5 cut(s) 350, 799, 1534, 1541, 1567
NsiI ATGCAT 2 cut(s) 391, 419
NspI RCATGY 3 cut(s) 61, 163, 972
PaeR7I CTCGAG 1 cut(s) 641
PciI ACATGT 2 cut(s) 159, 968
PctI GAATGC 3 cut(s) 30, 1505, 1747
PfeI GAWTC 5 cut(s) 119, 343, 1589, 1613, 1854
PflMI CCANNNNNTGG 2 cut(s) 163, 204
PkrI GCNGC 8 cut(s) 555, 617, 1024, 1348, 1411, 1504, 1828, 1831
PleI GAGTC 4 cut(s) 603, 781, 806, 1790
PpsI GAGTC 4 cut(s) 603, 781, 806, 1790
PscI ACATGT 2 cut(s) 159, 968
PshBI ATTAAT 2 cut(s) 90, 1184
Psp124BI GAGCTC 1 cut(s) 697
PspEI GGTNACC 2 cut(s) 350, 1541
PspFI CCCAGC 1 cut(s) 618
PspN4I GGNNCC 5 cut(s) 178, 774, 1268, 1375, 1579
PspPI GGNCC 3 cut(s) 626, 773, 1732
PspXI VCTCGAGB 1 cut(s) 641
PstNI CAGNNNCTG 1 cut(s) 1025
PsuI RGATCY 2 cut(s) 848, 1373
PvuII CAGCTG 1 cut(s) 1022
RsaI GTAC 1 cut(s) 1057
RsaNI GTAC 1 cut(s) 1056
RseI CAYNNNNRTG 4 cut(s) 678, 702, 751, 1650
SacI GAGCTC 1 cut(s) 697
SatI GCNGC 8 cut(s) 554, 616, 1023, 1347, 1410, 1503, 1827, 1830
Sau3AI GATC 6 cut(s) 37, 64, 706, 848, 1373, 1654
Sau96I GGNCC 3 cut(s) 626, 773, 1732
SchI GAGTC 4 cut(s) 603, 781, 807, 1790
SduI GDGCHC 2 cut(s) 697, 739
SfcI CTRYAG 1 cut(s) 1764
Sfr274I CTCGAG 1 cut(s) 641
SinI GGWCC 2 cut(s) 773, 1732
SlaI CTCGAG 1 cut(s) 641
SmiMI CAYNNNNRTG 4 cut(s) 678, 702, 751, 1650
SmlI CTYRAG 3 cut(s) 641, 1003, 1880
SmoI CTYRAG 3 cut(s) 641, 1003, 1880
SsiI CCGC 3 cut(s) 355, 615, 1643
SspI AATATT 2 cut(s) 17, 1455
SspMI CTAG 7 cut(s) 459, 561, 1013, 1145, 1212, 1364, 1860
SstI GAGCTC 1 cut(s) 697
StyI CCWWGG 2 cut(s) 45, 782
TaaI ACNGT 4 cut(s) 728, 1238, 1318, 1699
TaqI TCGA 5 cut(s) 401, 642, 1087, 1299, 1650
TatI WGTACW 1 cut(s) 1055
TauI GCSGC 1 cut(s) 618
TfiI GAWTC 5 cut(s) 119, 343, 1589, 1613, 1854
TscAI CASTG 4 cut(s) 300, 525, 1492, 1543
TseFI GTSAC 5 cut(s) 350, 799, 1534, 1541, 1567
TseI GCWGC 7 cut(s) 553, 1022, 1346, 1409, 1502, 1826, 1829
Tsp45I GTSAC 5 cut(s) 350, 799, 1534, 1541, 1567
TspDTI ATGAA 5 cut(s) 132, 345, 1151, 1239, 1754
TspRI CASTG 4 cut(s) 300, 525, 1492, 1543
Van91I CCANNNNNTGG 2 cut(s) 163, 204
Vha464I CTTAAG 1 cut(s) 1880
VpaK11BI GGWCC 2 cut(s) 773, 1732
VspI ATTAAT 2 cut(s) 90, 1184
XapI RAATTY 4 cut(s) 284, 1069, 1339, 1490
XceI RCATGY 3 cut(s) 61, 163, 972
XhoI CTCGAG 1 cut(s) 641
XspI CTAG 7 cut(s) 459, 561, 1013, 1145, 1212, 1364, 1860
Zsp2I ATGCAT 2 cut(s) 391, 419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.