Rh3BG300300

BRCA2, oligonucleotide/oligosaccharide-binding, domain 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0004075
Physical Location & Seq
Reverse (-)
30152752 .. 30161277
8526 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG300300.1

Sequence Viewer

Length: 3273 bp
ATGTCCACATGGCACATGTTCTCCGACGCCGGCGGCGGCAATTTCCGGTGGCGAATATCCGGTCCCGACCCCAATACCCCACCGCCGGACGCCGCCTTCTATTCGGACAACGAAAATCTCAGCTCAAGCTCAAGCTCAAGCACTCGCCTGCCTTCCATGGCCGACCTCTTGCTTCAAGGCTGTTCAAAACTCGCGGCGGAGAGTCAGAGAAATCACGACACAGGTGTTGCCATGTTTCGCAATGGATTCGGAAGATCCGTTTCCGTCAAGCCGTCGTCGTTAGCCAAAGCGGCGTCGCTTCTGAGCTCCGAATCAGGCCGAATGAAAGGTACCGAAAGTGAGAGTAGAGGTGGTTTCGGTGATTCCCTTTTCCAGACTGCCTCTGGGAAGATGGTTAATATATCTTCCAAAGGTCTTGTCAAGGCCAAGAGATTGCTTGGTTTGGAAGATGATAATGGGGACTGTAATCTTCCTGGTTTCAGCAGTGCTGGGGTTAAGGATGCTGTATCGGTTTCAAGGTCTTCGTTGAATCATGTGACTGGTTCAGTGCAAACTGGGTTAACGAATGTGTCCAATCTAAATTCTGTGCAAGCTGAAGTGCCTAGTACAGCTCGTACACCTTCATCAGTCAAGTTACATACACCCGGAGGGAGATCTACTTCTGTTTCTAGTGATGCATTTAAGACAGGTTCTGTGCAGAGTAGATGTAAGAATGAGTCTAACCAGAATTTTATGCAATCCGAGATGACTAATTCAGTTTCTACACCTTCATCAGTCCAGTTACATACACCCAGTGTAAGAACTTTGTCTGTTTCAACTGATGCACACAAGACTGGTTCAGTGCAAAGTAGATTTAAGAATGAATCAAAACTAAATTATATGCAATCCGAGCCTAGTTCAGCTTGTACGCCTTCATCAGCCAAGCTACTTGCACCTGGAGGATGCTCTAAATCTCTTTCCACTGGTGCACATAAGACTGGTTCTGTGGAAAGTGGAGTTACAAATGAGACTGATCCGAGTTTTATGCAATCCCAGAAGCCTAATTTAGCTCCCAAACCTCCATCACTCAAGTTCCATACAGCTGGAGGAAGATCTATATCTGTTTCCACTGATGCACTACAACGTGCAAGGAGTCTTCTTGGTGACCCAGACTTGGGAACTCTCCTGAATGAGGGGAACTCAGACTTGGATCTGACATTTTCAAAAGGTAGAGAACATGATAGTCACACTGCCTCTTCCCACCAGAAAATACCTAAGACCAAATTTTTAACGAAGAGTTTTGTATCTCCACTGCAATCATCCACTAATCAAGTGCGGACATCAGCAGTCAAGTCAGATAGTACAAATTGGGGCACTAACCTGATCAGCCAATTTGATGTTGTTAGCAATGAAAATGCCTGTAGGTCCAATGGTGAGTTACCTTGTGGGAAAAAACCCTTCAGCAACAAACCCTGTACCCTTACTACAGTAGAAAACAATTATTTGGCAAATGGCACTGGTGAAAGGATTAATCCTGTTGAAAGGTCACTAGCCAAGCCATTGGTGGATATTTCAAATACCATTGGCACCACTCCTCTGAGTAATATACAAATGGCTGGTGTAAAGAGGAGGCTTGGAGGAAATTCTATTTCTCCATTCAAGAAGCCTCGCATTTCCAACTTCTCCAGCCCATTGCATAAGAATGTTCCACTTGTTCCTAATGGTTTGTCTACTTTTCTGTCTGACCGTTCAAGTGGCAAAAGAAGGGTTTCTACTCGATATCCTGTCATGGTGACCAGAATGTCTTTGAAGAAATATTTTGGAATGCCACCATCAGATCAAACCATGGTGGACTGCATGTCAGATCAGGTGAGAAGAGTTACAGCAATTAATGCAGAAAACTACATGTTTCCTGATGAATCTGGCTTAAACTACGTAGGGGCAGAAGCTTTTGTCCACATGTTGGCTTCTTCTGGAGCCTCAACACAAAATACTTCCAGAGAGTGGGTCATAAATCACTACAAGTGGATTGTCTGGAAACTGGCTTGTTATGAGAGATGCTATCCAGCTAAAGCTTTAGGAAAATTTTTGACACTGCCCAATGTGCTTGAAGAATTGAAGTATAGATATGAAAGAGAAGTGAATCATGGTCACCGCTCTGCAATTAAGAAAATACTGGAAGGAGATGCATTACCTTCTTCGATGTTGGTCTTATGCATTTCAGCTATTCGCTCAAAACCTGACCCAAATATAGAGACTAGCTCCGGAGCTGAAAATAGTAGTGCAACAAAAGTTGAACTTACTGATGGGTGGTATTCAGTGGATGCTATTCTGGATGCTCTCCTATCAAAGCAGCTTGCTAGTGGAAAATTGTTTGTTGGACAGAAACTTCGGATTTGGGGAGCAGGACTCTGCGGATGGGTTGGGCCTATTTCACCCCTCGAGGTGTCAAGAGAAGTTATGTTAAGGCTACACATAAATGGCACATATAGAGCTCATTGGGATGATCAATTGGGATTTTGCAACTGTGTTGGTGCTCCATTAGCATTTAAGTGCATCAAGAGCGATGGGGGTCCAGTTCCTTGGACTCTTGTAGGAGTCACACGGATATACCCTGTTTTATACAAAGAAAGGTTAAGTAATGGAAGATCTGTTGTGAGATCGGAGAGGTTGGAGACCAAAATGATGCAATCATATAGCCAGAGGCGCTCTAATGTTATTGAGGGCATTATTTCTGAGTTCCAAAGAGGATTAGAACATTCGCATACATGTAATGAGAGAGATAGTGAAGGAGCAAAACTCTTGAGGATACTAGAGACAGCTGCTGAACCAGAAGTTTTAATGGCAGAGATGAGTACAGAACAATTGAATTCTTTTACCAAATATCGAGCAAAATTAGAGGCAATCAAGCAGTCAGACATGGAGAAATCAATTATGAAAGCACTAGAAGATGCTGGATTAGCTGAGAGGGAAGTGATGCCATTAATGAGGGTGAGGGTAGTTGGACTAACTAGAAACTTATATGAAGGAAAAGACAGTCCCAAAGAAGGCTTAATAACAATCTGGAACCCATCAGAGAACCAGAAGTCTGAGTTGGTCGAGGGGCAAGCATATACTGTTTCTGACCTTATACCAACAAATTCGGCTGCTGATATTCTATACTTGCTAGCAAGAGGATCCAAAACGAAATGGAAGCCTTTATGTCAGCAGGCAATAGACCACTTCAAGCCCTTTTTTAGTCCTCGCAAATCAATAATATTGTCAGATTTTGGTCAAGTTCCTCATTCCAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000228 GO:0000278 GO:0000280 GO:0000281 GO:0000722 GO:0000723 GO:0000724 GO:0000725 GO:0000781 GO:0000784 GO:0000793 GO:0000794 GO:0000795 GO:0000800 GO:0000910 GO:0001556 GO:0001701 GO:0001824 GO:0001832 GO:0001833 GO:0002020 GO:0002376 GO:0002520 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0004402 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005739 GO:0005813 GO:0005815 GO:0005829 GO:0005856 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006281 GO:0006289 GO:0006302 GO:0006310 GO:0006312 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006974 GO:0006978 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007059 GO:0007098 GO:0007127 GO:0007140 GO:0007141 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0007281 GO:0007283 GO:0007292 GO:0007346 GO:0007399 GO:0007417 GO:0007420 GO:0007548 GO:0007568 GO:0007569 GO:0008022 GO:0008080 GO:0008092 GO:0008104 GO:0008150 GO:0008152 GO:0008156 GO:0008219 GO:0008283 GO:0008285 GO:0008406 GO:0008585 GO:0008608 GO:0008630 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009790 GO:0009792 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0009994 GO:0010165 GO:0010212 GO:0010225 GO:0010332 GO:0010468 GO:0010484 GO:0010485 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0012501 GO:0012505 GO:0015630 GO:0015631 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019953 GO:0021700 GO:0022402 GO:0022412 GO:0022414 GO:0023052 GO:0030097 GO:0030141 GO:0030154 GO:0030330 GO:0030879 GO:0031023 GO:0031297 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031410 GO:0031619 GO:0031974 GO:0031981 GO:0031982 GO:0032200 GO:0032465 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033036 GO:0033260 GO:0033365 GO:0033554 GO:0033593 GO:0033599 GO:0033600 GO:0034212 GO:0034502 GO:0034613 GO:0034641 GO:0034645 GO:0035264 GO:0035556 GO:0036211 GO:0040007 GO:0042127 GO:0042592 GO:0042770 GO:0042771 GO:0042772 GO:0042802 GO:0043009 GO:0043015 GO:0043060 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0043967 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0044703 GO:0044786 GO:0045005 GO:0045132 GO:0045137 GO:0045143 GO:0045184 GO:0045787 GO:0045893 GO:0045931 GO:0045934 GO:0045935 GO:0046483 GO:0046545 GO:0046660 GO:0048232 GO:0048285 GO:0048468 GO:0048469 GO:0048477 GO:0048478 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048534 GO:0048589 GO:0048599 GO:0048608 GO:0048609 GO:0048731 GO:0048732 GO:0048856 GO:0048869 GO:0050000 GO:0050678 GO:0050680 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051093 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0051252 GO:0051254 GO:0051276 GO:0051298 GO:0051301 GO:0051302 GO:0051303 GO:0051310 GO:0051311 GO:0051316 GO:0051321 GO:0051455 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051704 GO:0051716 GO:0051726 GO:0060249 GO:0060255 GO:0060322 GO:0061458 GO:0061640 GO:0061733 GO:0061982 GO:0065007 GO:0065008 GO:0070013 GO:0070198 GO:0070199 GO:0070200 GO:0070727 GO:0071695 GO:0071704 GO:0071840 GO:0072331 GO:0072332 GO:0072594 GO:0080090 GO:0090304 GO:0090329 GO:0097159 GO:0097190 GO:0097193 GO:0097708 GO:0098687 GO:0098813 GO:0099086 GO:0099503 GO:0140013 GO:1901360 GO:1901363 GO:1901564 GO:1901576 GO:1902298 GO:1902680 GO:1902969 GO:1903046 GO:1903047 GO:1903506 GO:1903508 GO:1990426 GO:1990505 GO:2000026 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03440 ko03460 ko05200 ko05212 ko05224 map03440 map03460 map05200 map05212 map05224
Pfam Domains
Protein Families
BRCA-2_OB1 BRCA-2_helical BRCA2

Protein Analysis

1090

Amino Acids

118.7

Weight (kDa)

9.28

Isoelectric Point (pI)

43.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCA2 PF00634 122 - 147 6e-06 BRCA2 repeat
BRCA2 PF00634 357 - 382 2e-06 BRCA2 repeat
BRCA-2_helical PF09169 626 - 709 5.5e-17 BRCA2, helical
BRCA-2_OB1 PF09103 713 - 834 3.1e-40 BRCA2, oligonucleotide/oligosaccharide-binding, domain 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1780
AbsI CCTCGAGG 1 cut(s) 2420
Acc65I GGTACC 1 cut(s) 329
AccB1I GGYRCC 2 cut(s) 329, 1565
AccB7I CCANNNNNTGG 2 cut(s) 1942, 1983
AccBSI CCGCTC 1 cut(s) 2136
AccI GTMKAC 1 cut(s) 1709
AccII CGCG 1 cut(s) 194
AccIII TCCGGA 1 cut(s) 2243
AclWI GGATC 5 cut(s) 249, 1007, 1197, 3150, 3163
AcoI YGGCCR 1 cut(s) 159
AcsI RAATTY 7 cut(s) 580, 727, 1262, 1621, 2063, 2848, 3118
AcuI CTGAAG 2 cut(s) 615, 1423
AcyI GRCGYC 3 cut(s) 27, 90, 293
AdeI CACNNNGTG 1 cut(s) 794
AfaI GTAC 7 cut(s) 331, 607, 616, 907, 1342, 1456, 2836
AfiI CCNNNNNNNGG 7 cut(s) 85, 1153, 1154, 1171, 1942, 1983, 3026
AflIII ACRYGT 4 cut(s) 15, 1884, 1938, 2747
AhdI GACNNNNNGTC 1 cut(s) 1837
AjnI CCWGG 3 cut(s) 472, 934, 3266
AjuI GAANNNNNNNTTGG 4 cut(s) 1169, 1201, 3056, 3088
Alw21I GWGCWC 4 cut(s) 308, 970, 2476, 2518
Alw26I GTCTC 4 cut(s) 1001, 2228, 2648, 2789
Alw44I GTGCAC 1 cut(s) 966
AlwI GGATC 5 cut(s) 249, 1007, 1197, 3150, 3163
AlwNI CAGNNNCTG 2 cut(s) 692, 2804
Ama87I CYCGRG 1 cut(s) 2420
Aor13HI TCCGGA 1 cut(s) 2243
AoxI GGCC 4 cut(s) 159, 316, 423, 2405
ApaLI GTGCAC 1 cut(s) 966
ApeKI GCWGC 3 cut(s) 2332, 2801, 3125
ApoI RAATTY 7 cut(s) 580, 727, 1262, 1621, 2063, 2848, 3118
ArsI GACNNNNNNTTYG 6 cut(s) 46, 78, 402, 434, 2352, 2384
AseI ATTAAT 3 cut(s) 1509, 1869, 2963
Asp700I GAANNNNTTC 1 cut(s) 1747
Asp718I GGTACC 1 cut(s) 329
AspLEI GCGC 1 cut(s) 2688
AspS9I GGNCC 4 cut(s) 62, 1404, 2405, 2552
AsuC2I CCSGG 1 cut(s) 645
AsuHPI GGTGA 9 cut(s) 371, 1154, 1424, 1511, 1783, 1861, 2123, 2406, 2983
AsuNHI GCTAGC 1 cut(s) 3145
AvaI CYCGRG 1 cut(s) 2420
AvaII GGWCC 3 cut(s) 62, 1404, 2552
BaeGI GKGCMC 2 cut(s) 970, 1355
BamHI GGATCC 1 cut(s) 3155
BanI GGYRCC 2 cut(s) 329, 1565
BanII GRGCYC 2 cut(s) 308, 2476
BarI GAAGNNNNNNTAC 2 cut(s) 1735, 1767
BbsI GAAGAC 2 cut(s) 513, 1127
Bbv12I GWGCWC 4 cut(s) 308, 970, 2476, 2518
BbvI GCAGC 3 cut(s) 2344, 2788, 3112
BccI CCATC 7 cut(s) 385, 1069, 1819, 2279, 2391, 2540, 3058
BceAI ACGGC 1 cut(s) 256
BcgI CGANNNNNNTGC 4 cut(s) 229, 263, 1006, 1040
BciT130I CCWGG 3 cut(s) 474, 936, 3268
BciVI GTATCC 1 cut(s) 2781
BclI TGATCA 2 cut(s) 1362, 2485
BcnI CCSGG 1 cut(s) 645
BcoDI GTCTC 4 cut(s) 1001, 2228, 2648, 2789
BfmI CTRYAG 2 cut(s) 1399, 1464
BfoI RGCGCY 1 cut(s) 2689
BfuI GTATCC 1 cut(s) 2781
BglI GCCNNNNNGGC 1 cut(s) 290
BglII AGATCT 3 cut(s) 653, 1091, 2627
BisI GCNGC 8 cut(s) 34, 37, 93, 195, 291, 2333, 2802, 3126
BlsI GCNGC 8 cut(s) 35, 38, 94, 196, 292, 2334, 2803, 3127
Bme1390I CCNGG 4 cut(s) 474, 645, 936, 3268
Bme18I GGWCC 3 cut(s) 62, 1404, 2552
BmeRI GACNNNNNGTC 1 cut(s) 1837
BmeT110I CYCGRG 1 cut(s) 2420
BmgT120I GGNCC 4 cut(s) 62, 1404, 2405, 2552
BmiI GGNNCC 7 cut(s) 64, 331, 1567, 1957, 2553, 3047, 3157
BmrFI CCNGG 4 cut(s) 474, 645, 936, 3268
BmrI ACTGGG 2 cut(s) 564, 786
BmtI GCTAGC 1 cut(s) 3149
BmuI ACTGGG 2 cut(s) 564, 786
BpiI GAAGAC 2 cut(s) 513, 1127
BplI GAGNNNNNCTC 8 cut(s) 1163, 1195, 2225, 2257, 2373, 2405, 2763, 2795
BpmI CTGGAG 4 cut(s) 957, 1104, 1648, 1974
BpuEI CTTGAG 5 cut(s) 109, 115, 121, 1052, 2803
BpuMI CCSGG 1 cut(s) 645
BsaAI YACGTR 1 cut(s) 1915
BsaBI GATNNNNATC 1 cut(s) 1096
BsaHI GRCGYC 3 cut(s) 27, 90, 293
BsaI GGTCTC 1 cut(s) 2648
BsaJI CCNNGG 3 cut(s) 156, 1824, 2561
BsaWI WCCGGW 3 cut(s) 45, 59, 2243
BsaXI ACNNNNNCTCC 2 cut(s) 5, 35
Bsc4I CCNNNNNNNGG 7 cut(s) 85, 1153, 1154, 1171, 1942, 1983, 3026
Bse118I RCCGGY 1 cut(s) 29
Bse3DI GCAATG 3 cut(s) 247, 1393, 1670
Bse8I GATNNNNATC 1 cut(s) 1096
BseAI TCCGGA 1 cut(s) 2243
BseBI CCWGG 3 cut(s) 474, 936, 3268
BseDI CCNNGG 3 cut(s) 156, 1824, 2561
BseGI GGATG 7 cut(s) 505, 947, 1298, 2308, 2320, 2402, 2488
BseJI GATNNNNATC 1 cut(s) 1096
BseLI CCNNNNNNNGG 7 cut(s) 85, 1153, 1154, 1171, 1942, 1983, 3026
BseMI GCAATG 3 cut(s) 247, 1393, 1670
BseMII CTCAG 7 cut(s) 133, 293, 1194, 1568, 2706, 2934, 3060
BseRI GAGGAG 2 cut(s) 1563, 1621
BseSI GKGCMC 2 cut(s) 970, 1355
BseXI GCAGC 3 cut(s) 2344, 2788, 3112
BseYI CCCAGC 1 cut(s) 488
BsgI GTGCAG 1 cut(s) 716
Bsh1236I CGCG 1 cut(s) 194
BshFI GGCC 4 cut(s) 161, 318, 425, 2407
BshNI GGYRCC 2 cut(s) 329, 1565
BsiHKAI GWGCWC 4 cut(s) 308, 970, 2476, 2518
BsiHKCI CYCGRG 1 cut(s) 2420
BsiSI CCGG 6 cut(s) 30, 46, 60, 86, 645, 2244
BslFI GGGAC 3 cut(s) 48, 473, 3003
BslI CCNNNNNNNGG 7 cut(s) 85, 1153, 1154, 1171, 1942, 1983, 3026
BsmAI GTCTC 4 cut(s) 1001, 2228, 2648, 2789
BsmFI GGGAC 3 cut(s) 48, 473, 3003
BsmI GAATGC 1 cut(s) 1809
BsnI GGCC 4 cut(s) 161, 318, 425, 2407
Bso31I GGTCTC 1 cut(s) 2648
BsoBI CYCGRG 1 cut(s) 2420
Bsp1286I GDGCHC 5 cut(s) 308, 970, 1355, 2476, 2518
Bsp13I TCCGGA 1 cut(s) 2243
Bsp19I CCATGG 2 cut(s) 156, 1824
BspANI GGCC 4 cut(s) 161, 318, 425, 2407
BspCNI CTCAG 7 cut(s) 132, 294, 1193, 1569, 2707, 2935, 3061
BspEI TCCGGA 1 cut(s) 2243
BspFNI CGCG 1 cut(s) 194
BspLI GGNNCC 7 cut(s) 64, 331, 1567, 1957, 2553, 3047, 3157
BspOI GCTAGC 1 cut(s) 3149
BspPI GGATC 5 cut(s) 249, 1007, 1197, 3150, 3163
BspT107I GGYRCC 2 cut(s) 329, 1565
BspTNI GGTCTC 1 cut(s) 2648
BsrBI CCGCTC 1 cut(s) 2136
BsrDI GCAATG 3 cut(s) 247, 1393, 1670
BsrFI RCCGGY 1 cut(s) 29
BssAI RCCGGY 1 cut(s) 29
BssECI CCNNGG 3 cut(s) 156, 1824, 2561
BssNI GRCGYC 3 cut(s) 27, 90, 293
BssT1I CCWWGG 3 cut(s) 156, 1824, 2561
Bst2UI CCWGG 3 cut(s) 474, 936, 3268
Bst4CI ACNGT 6 cut(s) 464, 1468, 1727, 2507, 3017, 3097
Bst6I CTCTTC 3 cut(s) 1240, 1268, 1849
BstACI GRCGYC 3 cut(s) 27, 90, 293
BstAPI GCANNNNNTGC 1 cut(s) 1871
BstBAI YACGTR 1 cut(s) 1915
BstC8I GCNNGC 7 cut(s) 31, 149, 591, 2337, 3087, 3147, 3189
BstDEI CTNAG 8 cut(s) 119, 302, 1180, 1254, 1577, 2715, 2943, 3069
BstDSI CCRYGG 2 cut(s) 156, 1824
BstEII GGTNACC 3 cut(s) 1142, 1771, 2129
BstENI CCTNNNNNAGG 1 cut(s) 1169
BstF5I GGATG 7 cut(s) 505, 947, 1298, 2308, 2320, 2402, 2488
BstFNI CGCG 1 cut(s) 194
BstH2I RGCGCY 1 cut(s) 2689
BstHHI GCGC 1 cut(s) 2688
BstMAI GTCTC 4 cut(s) 1001, 2228, 2648, 2789
BstMWI GCNNNNNNNGC 8 cut(s) 290, 889, 1871, 2083, 2522, 2541, 2685, 2939
BstNI CCWGG 3 cut(s) 474, 936, 3268
BstNSI RCATGY 5 cut(s) 19, 1840, 1888, 1942, 2751
BstPI GGTNACC 3 cut(s) 1142, 1771, 2129
BstSCI CCNGG 4 cut(s) 472, 643, 934, 3266
BstSFI CTRYAG 2 cut(s) 1399, 1464
BstSLI GKGCMC 2 cut(s) 970, 1355
BstSNI TACGTA 1 cut(s) 1915
BstUI CGCG 1 cut(s) 194
BstV1I GCAGC 3 cut(s) 2344, 2788, 3112
BstV2I GAAGAC 2 cut(s) 513, 1127
BstX2I RGATCY 6 cut(s) 254, 653, 1091, 1189, 2627, 3155
BstXI CCANNNNNNTGG 3 cut(s) 1082, 1540, 2562
BstYI RGATCY 6 cut(s) 254, 653, 1091, 1189, 2627, 3155
BsuI GTATCC 1 cut(s) 2781
BsuRI GGCC 4 cut(s) 161, 318, 425, 2407
BtgI CCRYGG 2 cut(s) 156, 1824
BtgZI GCGATG 1 cut(s) 2559
BtsCI GGATG 7 cut(s) 505, 947, 1298, 2308, 2320, 2402, 2488
BtsI GCAGTG 4 cut(s) 490, 1227, 1289, 2072
Cac8I GCNNGC 7 cut(s) 31, 149, 591, 2337, 3087, 3147, 3189
CaiI CAGNNNCTG 2 cut(s) 692, 2804
CfoI GCGC 1 cut(s) 2688
Cfr10I RCCGGY 1 cut(s) 29
Cfr13I GGNCC 4 cut(s) 62, 1404, 2405, 2552
CseI GACGC 3 cut(s) 35, 98, 282
Csp6I GTAC 7 cut(s) 330, 606, 615, 906, 1341, 1455, 2835
CviQI GTAC 7 cut(s) 330, 606, 615, 906, 1341, 1455, 2835
DdeI CTNAG 8 cut(s) 119, 302, 1180, 1254, 1577, 2715, 2943, 3069
DraIII CACNNNGTG 1 cut(s) 794
DrdI GACNNNNNNGTC 1 cut(s) 1780
DriI GACNNNNNGTC 1 cut(s) 1837
DseDI GACNNNNNNGTC 1 cut(s) 1780
EaeI YGGCCR 1 cut(s) 159
Eam1104I CTCTTC 3 cut(s) 1240, 1268, 1849
Eam1105I GACNNNNNGTC 1 cut(s) 1837
EarI CTCTTC 3 cut(s) 1240, 1268, 1849
EciI GGCGGA 1 cut(s) 212
Ecl136II GAGCTC 2 cut(s) 306, 2474
Eco105I TACGTA 1 cut(s) 1915
Eco130I CCWWGG 3 cut(s) 156, 1824, 2561
Eco24I GRGCYC 2 cut(s) 308, 2476
Eco31I GGTCTC 1 cut(s) 2648
Eco32I GATATC 1 cut(s) 1760
Eco47I GGWCC 3 cut(s) 62, 1404, 2552
Eco53kI GAGCTC 2 cut(s) 306, 2474
Eco57I CTGAAG 2 cut(s) 615, 1423
Eco88I CYCGRG 1 cut(s) 2420
Eco91I GGTNACC 3 cut(s) 1142, 1771, 2129
EcoICRI GAGCTC 2 cut(s) 306, 2474
EcoNI CCTNNNNNAGG 1 cut(s) 1169
EcoO65I GGTNACC 3 cut(s) 1142, 1771, 2129
EcoRI GAATTC 1 cut(s) 2848
EcoRII CCWGG 3 cut(s) 472, 934, 3266
EcoRV GATATC 1 cut(s) 1760
EcoT14I CCWWGG 3 cut(s) 156, 1824, 2561
EcoT22I ATGCAT 3 cut(s) 679, 2170, 2198
EcoT38I GRGCYC 2 cut(s) 308, 2476
ErhI CCWWGG 3 cut(s) 156, 1824, 2561
FalI AAGNNNNNCTT 2 cut(s) 2262, 2294
FaqI GGGAC 3 cut(s) 48, 473, 3003
FbaI TGATCA 2 cut(s) 1362, 2485
FblI GTMKAC 1 cut(s) 1709
Fnu4HI GCNGC 8 cut(s) 34, 37, 93, 195, 291, 2333, 2802, 3126
FokI GGATG 7 cut(s) 512, 954, 1285, 2315, 2327, 2409, 2495
FriOI GRGCYC 2 cut(s) 308, 2476
Fsp4HI GCNGC 8 cut(s) 34, 37, 93, 195, 291, 2333, 2802, 3126
GlaI GCGC 1 cut(s) 2687
GluI GCNGC 8 cut(s) 34, 37, 93, 195, 291, 2333, 2802, 3126
GsaI CCCAGC 1 cut(s) 492
GsuI CTGGAG 4 cut(s) 957, 1104, 1648, 1974
HaeII RGCGCY 1 cut(s) 2689
HaeIII GGCC 4 cut(s) 161, 318, 425, 2407
HapII CCGG 6 cut(s) 30, 46, 60, 86, 645, 2244
HgaI GACGC 3 cut(s) 35, 98, 282
HhaI GCGC 1 cut(s) 2688
Hin1I GRCGYC 3 cut(s) 27, 90, 293
Hin6I GCGC 1 cut(s) 2686
HinP1I GCGC 1 cut(s) 2686
HincII GTYRAC 1 cut(s) 561
HindII GTYRAC 1 cut(s) 561
HindIII AAGCTT 2 cut(s) 1926, 2052
HpaI GTTAAC 1 cut(s) 561
HpaII CCGG 6 cut(s) 30, 46, 60, 86, 645, 2244
HphI GGTGA 9 cut(s) 371, 1154, 1424, 1511, 1783, 1861, 2123, 2406, 2983
Hpy166II GTNNAC 7 cut(s) 6, 561, 617, 968, 1710, 1831, 1936
Hpy8I GTNNAC 7 cut(s) 6, 561, 617, 968, 1710, 1831, 1936
Hpy99I CGWCG 4 cut(s) 29, 277, 280, 298
HpyCH4III ACNGT 6 cut(s) 464, 1468, 1727, 2507, 3017, 3097
HpyCH4IV ACGT 2 cut(s) 1123, 1914
HpyF10VI GCNNNNNNNGC 8 cut(s) 290, 889, 1871, 2083, 2522, 2541, 2685, 2939
HpyF3I CTNAG 8 cut(s) 119, 302, 1180, 1254, 1577, 2715, 2943, 3069
HpySE526I ACGT 2 cut(s) 1123, 1914
Hsp92I GRCGYC 3 cut(s) 27, 90, 293
HspAI GCGC 1 cut(s) 2686
Kpn2I TCCGGA 1 cut(s) 2243
KpnI GGTACC 1 cut(s) 333
KroI GCCGGC 1 cut(s) 29
KroNI GCCGGC 1 cut(s) 31
Ksp22I TGATCA 2 cut(s) 1362, 2485
KspAI GTTAAC 1 cut(s) 561
LmnI GCTCC 8 cut(s) 311, 1054, 1955, 2246, 2246, 2381, 2521, 2771
Lsp1109I GCAGC 3 cut(s) 2344, 2788, 3112
MaeII ACGT 2 cut(s) 1123, 1914
MbiI CCGCTC 1 cut(s) 2136
MfeI CAATTG 2 cut(s) 2489, 2843
MflI RGATCY 6 cut(s) 254, 653, 1091, 1189, 2627, 3155
MhlI GDGCHC 5 cut(s) 308, 970, 1355, 2476, 2518
MlyI GAGTC 6 cut(s) 211, 725, 1141, 2382, 2560, 2586
MmeI TCCRAC 5 cut(s) 48, 1680, 2338, 2631, 2962
Mph1103I ATGCAT 3 cut(s) 679, 2170, 2198
MreI CGCCGGCG 1 cut(s) 29
MroI TCCGGA 1 cut(s) 2243
MroNI GCCGGC 1 cut(s) 29
MroXI GAANNNNTTC 1 cut(s) 1747
MslI CAYNNNNRTG 4 cut(s) 1680, 2457, 2481, 2530
MspA1I CMGCKG 2 cut(s) 1082, 2801
MspI CCGG 6 cut(s) 30, 46, 60, 86, 645, 2244
MspR9I CCNGG 4 cut(s) 474, 645, 936, 3268
MunI CAATTG 2 cut(s) 2489, 2843
Mva1269I GAATGC 1 cut(s) 1809
MvaI CCWGG 3 cut(s) 474, 936, 3268
MvnI CGCG 1 cut(s) 194
MwoI GCNNNNNNNGC 8 cut(s) 290, 889, 1871, 2083, 2522, 2541, 2685, 2939
NaeI GCCGGC 1 cut(s) 31
NciI CCSGG 1 cut(s) 645
NcoI CCATGG 2 cut(s) 156, 1824
NgoMIV GCCGGC 1 cut(s) 29
NheI GCTAGC 1 cut(s) 3145
NlaIV GGNNCC 7 cut(s) 64, 331, 1567, 1957, 2553, 3047, 3157
NmuCI GTSAC 7 cut(s) 535, 1142, 1223, 1524, 1771, 2129, 2578
NsiI ATGCAT 3 cut(s) 679, 2170, 2198
NspI RCATGY 5 cut(s) 19, 1840, 1888, 1942, 2751
PaeR7I CTCGAG 1 cut(s) 2420
PciI ACATGT 4 cut(s) 15, 1884, 1938, 2747
PcsI WCGNNNNNNNCGW 1 cut(s) 255
PctI GAATGC 1 cut(s) 1809
PdiI GCCGGC 1 cut(s) 31
PdmI GAANNNNTTC 1 cut(s) 1747
PfeI GAWTC 7 cut(s) 246, 311, 362, 529, 863, 1898, 2122
PflMI CCANNNNNTGG 2 cut(s) 1942, 1983
PkrI GCNGC 8 cut(s) 35, 38, 94, 196, 292, 2334, 2803, 3127
PleI GAGTC 6 cut(s) 210, 724, 1140, 2382, 2560, 2585
PpsI GAGTC 6 cut(s) 210, 724, 1140, 2382, 2560, 2585
Ppu21I YACGTR 1 cut(s) 1915
PscI ACATGT 4 cut(s) 15, 1884, 1938, 2747
PshBI ATTAAT 3 cut(s) 1509, 1869, 2963
Psp124BI GAGCTC 2 cut(s) 308, 2476
Psp6I CCWGG 3 cut(s) 472, 934, 3266
PspEI GGTNACC 3 cut(s) 1142, 1771, 2129
PspFI CCCAGC 1 cut(s) 488
PspGI CCWGG 3 cut(s) 472, 934, 3266
PspN4I GGNNCC 7 cut(s) 64, 331, 1567, 1957, 2553, 3047, 3157
PspPI GGNCC 4 cut(s) 62, 1404, 2405, 2552
PspXI VCTCGAGB 1 cut(s) 2420
PstNI CAGNNNCTG 2 cut(s) 692, 2804
PsuI RGATCY 6 cut(s) 254, 653, 1091, 1189, 2627, 3155
PvuII CAGCTG 2 cut(s) 1082, 2801
RsaI GTAC 7 cut(s) 331, 607, 616, 907, 1342, 1456, 2836
RsaNI GTAC 7 cut(s) 330, 606, 615, 906, 1341, 1455, 2835
RseI CAYNNNNRTG 4 cut(s) 1680, 2457, 2481, 2530
SacI GAGCTC 2 cut(s) 308, 2476
SatI GCNGC 8 cut(s) 34, 37, 93, 195, 291, 2333, 2802, 3126
Sau96I GGNCC 4 cut(s) 62, 1404, 2405, 2552
SchI GAGTC 6 cut(s) 211, 725, 1141, 2382, 2560, 2586
ScrFI CCNGG 4 cut(s) 474, 645, 936, 3268
SduI GDGCHC 5 cut(s) 308, 970, 1355, 2476, 2518
SfcI CTRYAG 2 cut(s) 1399, 1464
Sfr274I CTCGAG 1 cut(s) 2420
SgrAI CRCCGGYG 1 cut(s) 29
SinI GGWCC 3 cut(s) 62, 1404, 2552
SlaI CTCGAG 1 cut(s) 2420
SmiMI CAYNNNNRTG 4 cut(s) 1680, 2457, 2481, 2530
SmlI CTYRAG 6 cut(s) 124, 130, 136, 1067, 2420, 2782
SmoI CTYRAG 6 cut(s) 124, 130, 136, 1067, 2420, 2782
SnaBI TACGTA 1 cut(s) 1915
SspI AATATT 2 cut(s) 1796, 3237
SstI GAGCTC 2 cut(s) 308, 2476
StyD4I CCNGG 4 cut(s) 472, 643, 934, 3266
StyI CCWWGG 3 cut(s) 156, 1824, 2561
TaaI ACNGT 6 cut(s) 464, 1468, 1727, 2507, 3017, 3097
TaiI ACGT 2 cut(s) 1126, 1917
TaqI TCGA 5 cut(s) 1756, 2180, 2421, 2866, 3078
TatI WGTACW 3 cut(s) 605, 1340, 2834
TauI GCSGC 5 cut(s) 36, 39, 95, 197, 293
TfiI GAWTC 7 cut(s) 246, 311, 362, 529, 863, 1898, 2122
TseFI GTSAC 7 cut(s) 535, 1142, 1223, 1524, 1771, 2129, 2578
TseI GCWGC 3 cut(s) 2332, 2801, 3125
Tsp45I GTSAC 7 cut(s) 535, 1142, 1223, 1524, 1771, 2129, 2578
TspGWI ACGGA 3 cut(s) 247, 253, 2599
Van91I CCANNNNNTGG 2 cut(s) 1942, 1983
VneI GTGCAC 1 cut(s) 966
VpaK11BI GGWCC 3 cut(s) 62, 1404, 2552
VspI ATTAAT 3 cut(s) 1509, 1869, 2963
XagI CCTNNNNNAGG 1 cut(s) 1169
XapI RAATTY 7 cut(s) 580, 727, 1262, 1621, 2063, 2848, 3118
XceI RCATGY 5 cut(s) 19, 1840, 1888, 1942, 2751
XcmI CCANNNNNNNNNTGG 2 cut(s) 380, 1540
XhoI CTCGAG 1 cut(s) 2420
XmiI GTMKAC 1 cut(s) 1709
XmnI GAANNNNTTC 1 cut(s) 1747
Zsp2I ATGCAT 3 cut(s) 679, 2170, 2198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.