Rh3CG298100

BRCA2, oligonucleotide/oligosaccharide-binding, domain 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0004075
Physical Location & Seq
Reverse (-)
30623203 .. 30629872
6670 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG298100.1

Sequence Viewer

Length: 3657 bp
ATGTCCACATGGCACATGTTCTCCGACGCCGGCGGCGGCAATCTCCGGTGGCAAATATCCGGTCCCGACCCCAATACCCCACCGCCGGACGCCGCCTTCTATTCGGACAACGAAAATCTCAGCTCAAGCACTCGCCTGCCTTCCATGGCCGATCTGTTGCTTCAAGGCTGTTCAAAGCTCGCGGCGGAGAGTCAGAGAAATCACGACGCAGGTGTTGCCATGTTTCGCAATGGATTCGGAAGATCCGTTTCCGTCAAGCCGTCGTCGTTAGCCAAAGCGGCGTCGCTTCTGAACTCCGAATCAGGCCGAATGAAAGGTATAGAAAGTGAGAGTAGAGGTGGTTTTGGTGATTCCCTTTTCCAGACTGCCTCTGGGAAGATGGTTAATATATCTTCAAAGGGTCTTGTCAAGGCCAAGAGATTGCTTGGTTTGGAAGATGATAATGGTGACTGTAATCTTCCCGGTTTCAGCAGTGCCGGGGTTAAGGATGCTGTATCGGTTTCAAGGTCTTCGTTGAATCATACGACTGGTTCAGTGCAAACTGGGTTAACGAATGTGTCCAATCTGAATTCTGTGCAAGCTGAAGTGCCTAGTACAGCTCGTACACCTTCATCAGTCAAGTTACATACACCCGGAGGGAGATCTACTTCTGTTTCTAGTGATGCATTTAAGACAGGTTCTGTGCAGAGTAGATGTAAGAATGAGTCTAACCAGAATTTTATGCAATCCGAGATGACTAATTCAGTTTCTACACTTTCATCAGTCCAGTTACATACACCCAGTGGAAGAACTTTGTCTGTTTCAACTGATGCACACAAGACTGGTTCAGTGCAAAGTAGATTTAAGAATGAGTCAAAACTAAATTATATGCAATCCGAGCCTAGTTCAGCTTGTACGCCTTCATCAGCCAAGCTACTTGCACCTGGAGGAAGCTCTAAATCTCTTTCCACTGGTGCACATAAGACTGGTTCTGTGCAAAGTGGAGTTACAAATGAGACTGATCCGAGTTTTATGCAATCCCAGAAGCCTAATTTAGCTCCCAAACCTCCATCAATCAAGTTCCATACAGCTGGAGGAAGATCTATATCTGTTTCAACTGATGCACTACAACGTGCAAGGAGTCTTCTTGGTGACCCAGACTTGGGAACTCTCCTGAATGAGGGGAACTCAGACTTGGATCTGACATTTCCAAAAGGTAGAGAACATGATAGTCACACTGCCTCTTCCCACCAGAAAATACCTACGACCAAATTTTTAACGAAGAGTTTTGTATCTCCACTGCAATCATCCACTAATCAAGTGCGGACATCAGCAGTCAAGTCAGATAGTACAAATTGGGGCACTAACCTGATCAGCCAATTTGATGTTGTTAGCAATGAAAATGCCTGCAGCTCAAATGGTGAGTTACCTTGTGGGAAAAAACCCTTCAGCAACAAACCCCGTACCCTTACTACAGTAGAAAACAATTATTTGGCAAATGGCACTGGTGAAAGGTTTAATCCTGTTGAAAGGTCACTAGCCAAGCCATTGGTGGATATTTCAAATACCATTGGCACCACTCCTCTGAGTAATATACAAATGACTGGTGTAAAGAGGAGTCTTGGAGGAAATTCTATTTCTCCATTCAAGAAGCCTCGCATTTCCAACTTCTCCACTCCATTGCATAAGAATGTTCCATGTGTTCCTAATGGTTTGTCTACCTTTCCGTCTGACCATTCAAGTGGCAAAAGAAGCGTTTCTACTCGATATCCTGTCCTGGTGACCAGAATGTCTTTGAAGAAATATTTTGGAATGCCACCATCAGATCAAACCGTGGTGGACTGCATGTCAGATCAGGTGAGAAGAGTTACAGCAATTAATGCAGAAAACTACATGTTTTCTGATGAATCTGGCTTAAACTACGTAGGGGCAGAAGCTTTTGTCCACATGTTGGCTTCTTCCGGAGCCTCAACACAAAATACTTCCAGAGAGTGGGTCGTAAATCACTACAAGTGGATTGTCTGGAAACTGGCTTGTTATGAGAGATGCTATCCAGCTAAAGCTGTAGGAAAATTTTTGACACTGCCCAATGTGCTTGAAGAATTGAAGTATAGATATGAAAGAGAAGTGAATCATGGTCACCGCTCTGCAATTAAGAAAATACTGGAAGGAGATGCATCACCTTCTTCGATGTTGGTCTTATGCATTTCAGCTATTCGCTCAAAACCTGACCCAAATATGGAGACTAGCTCCGGAGCTGAAAATAGTAGTGCCACAAAAGTTGAACTTACTGATGGGTGGTATTCAGTGGATGCTATTCTGGATGCTCTCCTATCAAAGCAGCTTGCTAGTGGAAAAATGTTTGTTGGACAGAAACTTCGGATTTGGGGAGCAGGACTCTGCGGCTGGGTTGGGCCTATTTCACCCCTCGAGGTGTCAAGAGAAGTTATGTTAAGGCTACACATAAATGGCACATATAGAGCTCATTGGGATGATCAATTGGGATTTTGTAACTGTGTTGGTGCTCCGTTAGCATTTAAGTGCATCAAGAGCGATGGGGGTCCAGTTCCTTGGACTCTTGTAGGAGTCACAAGGATATTCCCTGTTTTATACAAAGAAAGGTTAAGTAATGGAAGATCTGTTGTGAGGTCGGAGAGGTTGGAGACCAAAATGATGCAATCATATAGCCAGAGGCGCTCTAATGTTATTGAGGGCATTATTTCTGAGTTCCAAAGAGGATTAGAACATTCGCATACATGTAATGAGAGAGATAGTGAAGGAGCAAAACTCTTGAGGATACTAGAGACAGCTGCTGAACCAGAAGTTTTAATGGCAGAGATGAGTACAGAACAATTGAATTCTTTTACCAAATATCGAGCAAAATTAGAGGCAATCAAGCAGTCAGACATGGAGAAATCAATTATGAAAGCACTAGAAGATGCTGGATTAGCTGAGAGGGAAGTGATGCCATTAATGAGGGTGAGGGTAGTTGGACTAACTAGAAACTTATATGAAGGAGAAGACAGTCCCAAAGAAGGCTTAATAACAATCTGGAACCCATCAGAGAACCAGAAGTCTGAGTTGGTCGAGGGGCAAGCATATACTGTTTCTGACCTTATACCAACAAATTCGGCTGCTGATATTCTATACTTGCTAGCAAGAGGATCCAAAACGAAATGGAAGCCTTTATGTCAGCAGGCAGTAGACCACTTTAAGCCCTTTTTTAGTCCTCGCAAATCAATAATATTGTCAGATTTTGGTCAAGTTCCTCTTTCCAGTGAATTTGATATTGCTGCATTCGTTGTGTTTGTGGGGGAGGTTTATGTCGCTGGTCACCAGAAGAAACAATGGGTGTTTGTGACAGATGGCTCCATTTCTGAATCAAAGTCAGAAGAATTAAACGATTCTCTACTTGCCATCTGCTTCTGTTCACCGCATATCGATGATCAATCAGATGTTCCTATAAACTACAACCTCGCAGGTTCAACGGTCGGCTTTTGTAATCTTATCAAGAGAGCAAAGGACCAAATGAATGCTCTTTGGGTAGCTGATGCTACAGAAAACTCGGCATACTTTTTGAGTTTTGACTCTCCACATTGTTCACATCTCAAAGGTGCTGCTGCCTCTGCTGAAAGATGGGGAAGAATCTCTAGCTTGGTCTGTATTTTAAAACTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000228 GO:0000278 GO:0000280 GO:0000281 GO:0000722 GO:0000723 GO:0000724 GO:0000725 GO:0000781 GO:0000784 GO:0000793 GO:0000794 GO:0000795 GO:0000800 GO:0000910 GO:0001556 GO:0001701 GO:0001824 GO:0001832 GO:0001833 GO:0002020 GO:0002376 GO:0002520 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0004402 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005739 GO:0005813 GO:0005815 GO:0005829 GO:0005856 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006281 GO:0006289 GO:0006302 GO:0006310 GO:0006312 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006974 GO:0006978 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007059 GO:0007098 GO:0007127 GO:0007140 GO:0007141 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0007281 GO:0007283 GO:0007292 GO:0007346 GO:0007399 GO:0007417 GO:0007420 GO:0007548 GO:0007568 GO:0007569 GO:0008022 GO:0008080 GO:0008092 GO:0008104 GO:0008150 GO:0008152 GO:0008156 GO:0008219 GO:0008283 GO:0008285 GO:0008406 GO:0008585 GO:0008608 GO:0008630 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009790 GO:0009792 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0009994 GO:0010165 GO:0010212 GO:0010225 GO:0010332 GO:0010468 GO:0010484 GO:0010485 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0012501 GO:0012505 GO:0015630 GO:0015631 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019953 GO:0021700 GO:0022402 GO:0022412 GO:0022414 GO:0023052 GO:0030097 GO:0030141 GO:0030154 GO:0030330 GO:0030879 GO:0031023 GO:0031297 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031410 GO:0031619 GO:0031974 GO:0031981 GO:0031982 GO:0032200 GO:0032465 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033036 GO:0033260 GO:0033365 GO:0033554 GO:0033593 GO:0033599 GO:0033600 GO:0034212 GO:0034502 GO:0034613 GO:0034641 GO:0034645 GO:0035264 GO:0035556 GO:0036211 GO:0040007 GO:0042127 GO:0042592 GO:0042770 GO:0042771 GO:0042772 GO:0042802 GO:0043009 GO:0043015 GO:0043060 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0043967 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0044703 GO:0044786 GO:0045005 GO:0045132 GO:0045137 GO:0045143 GO:0045184 GO:0045787 GO:0045893 GO:0045931 GO:0045934 GO:0045935 GO:0046483 GO:0046545 GO:0046660 GO:0048232 GO:0048285 GO:0048468 GO:0048469 GO:0048477 GO:0048478 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048534 GO:0048589 GO:0048599 GO:0048608 GO:0048609 GO:0048731 GO:0048732 GO:0048856 GO:0048869 GO:0050000 GO:0050678 GO:0050680 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051093 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0051252 GO:0051254 GO:0051276 GO:0051298 GO:0051301 GO:0051302 GO:0051303 GO:0051310 GO:0051311 GO:0051316 GO:0051321 GO:0051455 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051704 GO:0051716 GO:0051726 GO:0060249 GO:0060255 GO:0060322 GO:0061458 GO:0061640 GO:0061733 GO:0061982 GO:0065007 GO:0065008 GO:0070013 GO:0070198 GO:0070199 GO:0070200 GO:0070727 GO:0071695 GO:0071704 GO:0071840 GO:0072331 GO:0072332 GO:0072594 GO:0080090 GO:0090304 GO:0090329 GO:0097159 GO:0097190 GO:0097193 GO:0097708 GO:0098687 GO:0098813 GO:0099086 GO:0099503 GO:0140013 GO:1901360 GO:1901363 GO:1901564 GO:1901576 GO:1902298 GO:1902680 GO:1902969 GO:1903046 GO:1903047 GO:1903506 GO:1903508 GO:1990426 GO:1990505 GO:2000026 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03440 ko03460 ko05200 ko05212 ko05224 map03440 map03460 map05200 map05212 map05224
Pfam Domains
Protein Families
BRCA-2_OB1 BRCA-2_helical BRCA2

Protein Analysis

1218

Amino Acids

132.38

Weight (kDa)

8.75

Isoelectric Point (pI)

42.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCA2 PF00634 118 - 143 6.8e-06 BRCA2 repeat
BRCA2 PF00634 354 - 378 2.4e-06 BRCA2 repeat
BRCA-2_helical PF09169 634 - 705 9.2e-17 BRCA2, helical
BRCA-2_OB1 PF09103 709 - 830 1.6e-40 BRCA2, oligonucleotide/oligosaccharide-binding, domain 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 200
AasI GACNNNNNNGTC 1 cut(s) 1768
AbsI CCTCGAGG 1 cut(s) 2408
Acc36I ACCTGC 2 cut(s) 200, 3449
AccB1I GGYRCC 1 cut(s) 1553
AccB7I CCANNNNNTGG 2 cut(s) 1930, 1971
AccBSI CCGCTC 1 cut(s) 2124
AccI GTMKAC 2 cut(s) 1697, 3183
AccII CGCG 1 cut(s) 182
AccIII TCCGGA 2 cut(s) 1940, 2231
AclWI GGATC 5 cut(s) 237, 995, 1185, 3138, 3151
AcoI YGGCCR 1 cut(s) 147
AcsI RAATTY 8 cut(s) 568, 715, 1250, 1609, 2051, 2836, 3106, 3260
AcuI CTGAAG 2 cut(s) 603, 1411
AcyI GRCGYC 3 cut(s) 27, 90, 281
AdeI CACNNNGTG 1 cut(s) 782
AfaI GTAC 6 cut(s) 595, 604, 895, 1330, 1444, 2824
AfiI CCNNNNNNNGG 8 cut(s) 85, 1141, 1142, 1159, 1930, 1971, 2218, 3014
AflIII ACRYGT 4 cut(s) 15, 1872, 1926, 2735
AhdI GACNNNNNGTC 1 cut(s) 1825
AjnI CCWGG 2 cut(s) 922, 1755
AjuI GAANNNNNNNTTGG 4 cut(s) 1157, 1189, 3044, 3076
Alw21I GWGCWC 3 cut(s) 958, 2464, 2506
Alw26I GTCTC 4 cut(s) 989, 2216, 2636, 2777
Alw44I GTGCAC 1 cut(s) 954
AlwI GGATC 5 cut(s) 237, 995, 1185, 3138, 3151
AlwNI CAGNNNCTG 2 cut(s) 680, 2792
Ama87I CYCGRG 1 cut(s) 2408
Aor13HI TCCGGA 2 cut(s) 1940, 2231
AoxI GGCC 4 cut(s) 147, 304, 411, 2393
ApaLI GTGCAC 1 cut(s) 954
ApeKI GCWGC 7 cut(s) 1389, 2320, 2789, 3113, 3272, 3596, 3599
ApoI RAATTY 8 cut(s) 568, 715, 1250, 1609, 2051, 2836, 3106, 3260
ArsI GACNNNNNNTTYG 4 cut(s) 46, 78, 2340, 2372
AseI ATTAAT 2 cut(s) 1857, 2951
Asp700I GAANNNNTTC 1 cut(s) 1735
AspLEI GCGC 1 cut(s) 2676
AspS9I GGNCC 4 cut(s) 62, 2393, 2540, 3502
AsuC2I CCSGG 3 cut(s) 462, 478, 633
AsuNHI GCTAGC 1 cut(s) 3133
AvaI CYCGRG 1 cut(s) 2408
AvaII GGWCC 3 cut(s) 62, 2540, 3502
BaeGI GKGCMC 2 cut(s) 958, 1343
BamHI GGATCC 1 cut(s) 3143
BanI GGYRCC 1 cut(s) 1553
BanII GRGCYC 1 cut(s) 2464
BarI GAAGNNNNNNTAC 2 cut(s) 1723, 1755
BbsI GAAGAC 3 cut(s) 501, 1115, 3006
Bbv12I GWGCWC 3 cut(s) 958, 2464, 2506
BbvI GCAGC 7 cut(s) 1401, 2332, 2776, 3100, 3259, 3583, 3586
BccI CCATC 9 cut(s) 373, 1057, 1807, 2267, 2528, 3046, 3338, 3404, 3609
BceAI ACGGC 1 cut(s) 244
BcgI CGANNNNNNTGC 4 cut(s) 217, 251, 994, 1028
BciT130I CCWGG 2 cut(s) 924, 1757
BciVI GTATCC 1 cut(s) 2769
BclI TGATCA 3 cut(s) 1350, 2473, 3424
BcnI CCSGG 3 cut(s) 462, 478, 633
BcoDI GTCTC 4 cut(s) 989, 2216, 2636, 2777
BfmI CTRYAG 4 cut(s) 1387, 1452, 2043, 3534
BfoI RGCGCY 1 cut(s) 2677
BfuAI ACCTGC 2 cut(s) 200, 3449
BfuI GTATCC 1 cut(s) 2769
BglI GCCNNNNNGGC 1 cut(s) 278
BglII AGATCT 3 cut(s) 641, 1079, 2615
Bme1390I CCNGG 5 cut(s) 462, 478, 633, 924, 1757
Bme18I GGWCC 3 cut(s) 62, 2540, 3502
BmeRI GACNNNNNGTC 1 cut(s) 1825
BmeT110I CYCGRG 1 cut(s) 2408
BmgT120I GGNCC 4 cut(s) 62, 2393, 2540, 3502
BmiI GGNNCC 7 cut(s) 64, 1555, 1945, 2541, 3035, 3145, 3349
BmrFI CCNGG 5 cut(s) 462, 478, 633, 924, 1757
BmrI ACTGGG 2 cut(s) 552, 774
BmtI GCTAGC 1 cut(s) 3137
BmuI ACTGGG 2 cut(s) 552, 774
BpiI GAAGAC 3 cut(s) 501, 1115, 3006
BplI GAGNNNNNCTC 8 cut(s) 1151, 1183, 2213, 2245, 2361, 2393, 2751, 2783
BpmI CTGGAG 2 cut(s) 945, 1092
BpuEI CTTGAG 2 cut(s) 109, 2791
BpuMI CCSGG 3 cut(s) 462, 478, 633
Bsa29I ATCGAT 1 cut(s) 3420
BsaAI YACGTR 1 cut(s) 1903
BsaBI GATNNNNATC 1 cut(s) 1084
BsaHI GRCGYC 3 cut(s) 27, 90, 281
BsaI GGTCTC 1 cut(s) 2636
BsaJI CCNNGG 4 cut(s) 144, 477, 1812, 2549
BsaWI WCCGGW 4 cut(s) 45, 59, 1940, 2231
BsaXI ACNNNNNCTCC 2 cut(s) 5, 35
Bsc4I CCNNNNNNNGG 8 cut(s) 85, 1141, 1142, 1159, 1930, 1971, 2218, 3014
Bse118I RCCGGY 1 cut(s) 29
Bse3DI GCAATG 3 cut(s) 235, 1381, 1658
Bse8I GATNNNNATC 1 cut(s) 1084
BseAI TCCGGA 2 cut(s) 1940, 2231
BseBI CCWGG 2 cut(s) 924, 1757
BseCI ATCGAT 1 cut(s) 3420
BseDI CCNNGG 4 cut(s) 144, 477, 1812, 2549
BseGI GGATG 5 cut(s) 493, 1286, 2296, 2308, 2476
BseJI GATNNNNATC 1 cut(s) 1084
BseLI CCNNNNNNNGG 8 cut(s) 85, 1141, 1142, 1159, 1930, 1971, 2218, 3014
BseMI GCAATG 3 cut(s) 235, 1381, 1658
BseMII CTCAG 6 cut(s) 133, 1182, 1556, 2694, 2922, 3048
BseRI GAGGAG 2 cut(s) 1551, 1609
BseSI GKGCMC 2 cut(s) 958, 1343
BseXI GCAGC 7 cut(s) 1401, 2332, 2776, 3100, 3259, 3583, 3586
BseYI CCCAGC 1 cut(s) 2385
BsgI GTGCAG 1 cut(s) 704
Bsh1236I CGCG 1 cut(s) 182
Bsh1285I CGRYCG 1 cut(s) 3471
BshFI GGCC 4 cut(s) 149, 306, 413, 2395
BshNI GGYRCC 1 cut(s) 1553
BshVI ATCGAT 1 cut(s) 3420
BsiEI CGRYCG 1 cut(s) 3471
BsiHKAI GWGCWC 3 cut(s) 958, 2464, 2506
BsiHKCI CYCGRG 1 cut(s) 2408
BsiSI CCGG 9 cut(s) 30, 46, 60, 86, 462, 477, 633, 1941, 2232
BslFI GGGAC 2 cut(s) 48, 2991
BslI CCNNNNNNNGG 8 cut(s) 85, 1141, 1142, 1159, 1930, 1971, 2218, 3014
BsmAI GTCTC 4 cut(s) 989, 2216, 2636, 2777
BsmFI GGGAC 2 cut(s) 48, 2991
BsmI GAATGC 3 cut(s) 1797, 3275, 3517
BsnI GGCC 4 cut(s) 149, 306, 413, 2395
Bso31I GGTCTC 1 cut(s) 2636
BsoBI CYCGRG 1 cut(s) 2408
Bsp1286I GDGCHC 4 cut(s) 958, 1343, 2464, 2506
Bsp13I TCCGGA 2 cut(s) 1940, 2231
Bsp19I CCATGG 1 cut(s) 144
BspANI GGCC 4 cut(s) 149, 306, 413, 2395
BspCNI CTCAG 6 cut(s) 132, 1181, 1557, 2695, 2923, 3049
BspDI ATCGAT 1 cut(s) 3420
BspEI TCCGGA 2 cut(s) 1940, 2231
BspFNI CGCG 1 cut(s) 182
BspLI GGNNCC 7 cut(s) 64, 1555, 1945, 2541, 3035, 3145, 3349
BspMAI CTGCAG 1 cut(s) 1391
BspMI ACCTGC 2 cut(s) 200, 3449
BspOI GCTAGC 1 cut(s) 3137
BspPI GGATC 5 cut(s) 237, 995, 1185, 3138, 3151
BspT107I GGYRCC 1 cut(s) 1553
BspTNI GGTCTC 1 cut(s) 2636
BsrBI CCGCTC 1 cut(s) 2124
BsrDI GCAATG 3 cut(s) 235, 1381, 1658
BsrFI RCCGGY 1 cut(s) 29
BssAI RCCGGY 1 cut(s) 29
BssECI CCNNGG 4 cut(s) 144, 477, 1812, 2549
BssNI GRCGYC 3 cut(s) 27, 90, 281
BssT1I CCWWGG 2 cut(s) 144, 2549
Bst2UI CCWGG 2 cut(s) 924, 1757
Bst4CI ACNGT 7 cut(s) 452, 1456, 1813, 2495, 3005, 3085, 3469
Bst6I CTCTTC 3 cut(s) 1228, 1256, 1837
BstACI GRCGYC 3 cut(s) 27, 90, 281
BstAPI GCANNNNNTGC 2 cut(s) 215, 1859
BstBAI YACGTR 1 cut(s) 1903
BstC8I GCNNGC 9 cut(s) 31, 137, 180, 579, 1387, 2325, 3075, 3135, 3177
BstDEI CTNAG 6 cut(s) 119, 1168, 1565, 2703, 2931, 3057
BstDSI CCRYGG 2 cut(s) 144, 1812
BstEII GGTNACC 4 cut(s) 1130, 1759, 2117, 3311
BstENI CCTNNNNNAGG 1 cut(s) 1157
BstF5I GGATG 5 cut(s) 493, 1286, 2296, 2308, 2476
BstFNI CGCG 1 cut(s) 182
BstH2I RGCGCY 1 cut(s) 2677
BstHHI GCGC 1 cut(s) 2676
BstMAI GTCTC 4 cut(s) 989, 2216, 2636, 2777
BstMCI CGRYCG 1 cut(s) 3471
BstNI CCWGG 2 cut(s) 924, 1757
BstNSI RCATGY 5 cut(s) 19, 1828, 1876, 1930, 2739
BstPI GGTNACC 4 cut(s) 1130, 1759, 2117, 3311
BstSCI CCNGG 5 cut(s) 460, 476, 631, 922, 1755
BstSFI CTRYAG 4 cut(s) 1387, 1452, 2043, 3534
BstSLI GKGCMC 2 cut(s) 958, 1343
BstSNI TACGTA 1 cut(s) 1903
BstUI CGCG 1 cut(s) 182
BstV1I GCAGC 7 cut(s) 1401, 2332, 2776, 3100, 3259, 3583, 3586
BstV2I GAAGAC 3 cut(s) 501, 1115, 3006
BstX2I RGATCY 6 cut(s) 242, 641, 1079, 1177, 2615, 3143
BstXI CCANNNNNNTGG 4 cut(s) 1070, 1528, 1721, 2550
BstYI RGATCY 6 cut(s) 242, 641, 1079, 1177, 2615, 3143
Bsu15I ATCGAT 1 cut(s) 3420
BsuI GTATCC 1 cut(s) 2769
BsuRI GGCC 4 cut(s) 149, 306, 413, 2395
BsuTUI ATCGAT 1 cut(s) 3420
BtgI CCRYGG 2 cut(s) 144, 1812
BtgZI GCGATG 1 cut(s) 2547
BtsCI GGATG 5 cut(s) 493, 1286, 2296, 2308, 2476
BtsI GCAGTG 4 cut(s) 478, 1215, 1277, 2060
BveI ACCTGC 2 cut(s) 200, 3449
Cac8I GCNNGC 9 cut(s) 31, 137, 180, 579, 1387, 2325, 3075, 3135, 3177
CaiI CAGNNNCTG 2 cut(s) 680, 2792
CfoI GCGC 1 cut(s) 2676
Cfr10I RCCGGY 1 cut(s) 29
Cfr13I GGNCC 4 cut(s) 62, 2393, 2540, 3502
ClaI ATCGAT 1 cut(s) 3420
CseI GACGC 4 cut(s) 35, 98, 215, 270
Csp6I GTAC 6 cut(s) 594, 603, 894, 1329, 1443, 2823
CspCI CAANNNNNGTGG 2 cut(s) 2242, 2277
CviQI GTAC 6 cut(s) 594, 603, 894, 1329, 1443, 2823
DdeI CTNAG 6 cut(s) 119, 1168, 1565, 2703, 2931, 3057
DraI TTTAAA 1 cut(s) 3648
DraIII CACNNNGTG 1 cut(s) 782
DrdI GACNNNNNNGTC 1 cut(s) 1768
DriI GACNNNNNGTC 1 cut(s) 1825
DseDI GACNNNNNNGTC 1 cut(s) 1768
EaeI YGGCCR 1 cut(s) 147
Eam1104I CTCTTC 3 cut(s) 1228, 1256, 1837
Eam1105I GACNNNNNGTC 1 cut(s) 1825
EarI CTCTTC 3 cut(s) 1228, 1256, 1837
EciI GGCGGA 1 cut(s) 200
Ecl136II GAGCTC 1 cut(s) 2462
Eco105I TACGTA 1 cut(s) 1903
Eco130I CCWWGG 2 cut(s) 144, 2549
Eco24I GRGCYC 1 cut(s) 2464
Eco31I GGTCTC 1 cut(s) 2636
Eco32I GATATC 1 cut(s) 1748
Eco47I GGWCC 3 cut(s) 62, 2540, 3502
Eco53kI GAGCTC 1 cut(s) 2462
Eco57I CTGAAG 2 cut(s) 603, 1411
Eco88I CYCGRG 1 cut(s) 2408
Eco91I GGTNACC 4 cut(s) 1130, 1759, 2117, 3311
EcoICRI GAGCTC 1 cut(s) 2462
EcoNI CCTNNNNNAGG 1 cut(s) 1157
EcoO65I GGTNACC 4 cut(s) 1130, 1759, 2117, 3311
EcoRI GAATTC 2 cut(s) 568, 2836
EcoRII CCWGG 2 cut(s) 922, 1755
EcoRV GATATC 1 cut(s) 1748
EcoT14I CCWWGG 2 cut(s) 144, 2549
EcoT22I ATGCAT 3 cut(s) 667, 2158, 2186
EcoT38I GRGCYC 1 cut(s) 2464
ErhI CCWWGG 2 cut(s) 144, 2549
FalI AAGNNNNNCTT 4 cut(s) 2250, 2282, 3234, 3266
FaqI GGGAC 2 cut(s) 48, 2991
FbaI TGATCA 3 cut(s) 1350, 2473, 3424
FblI GTMKAC 2 cut(s) 1697, 3183
FokI GGATG 5 cut(s) 500, 1273, 2303, 2315, 2483
FriOI GRGCYC 1 cut(s) 2464
GlaI GCGC 1 cut(s) 2675
GsaI CCCAGC 1 cut(s) 2389
GsuI CTGGAG 2 cut(s) 945, 1092
HaeII RGCGCY 1 cut(s) 2677
HaeIII GGCC 4 cut(s) 149, 306, 413, 2395
HapII CCGG 9 cut(s) 30, 46, 60, 86, 462, 477, 633, 1941, 2232
HgaI GACGC 4 cut(s) 35, 98, 215, 270
HhaI GCGC 1 cut(s) 2676
Hin1I GRCGYC 3 cut(s) 27, 90, 281
Hin6I GCGC 1 cut(s) 2674
HinP1I GCGC 1 cut(s) 2674
HincII GTYRAC 1 cut(s) 549
HindII GTYRAC 1 cut(s) 549
HindIII AAGCTT 1 cut(s) 1914
HpaI GTTAAC 1 cut(s) 549
HpaII CCGG 9 cut(s) 30, 46, 60, 86, 462, 477, 633, 1941, 2232
Hpy99I CGWCG 5 cut(s) 29, 209, 265, 268, 286
HpyCH4III ACNGT 7 cut(s) 452, 1456, 1813, 2495, 3005, 3085, 3469
HpyCH4IV ACGT 2 cut(s) 1111, 1902
HpyF3I CTNAG 6 cut(s) 119, 1168, 1565, 2703, 2931, 3057
HpySE526I ACGT 2 cut(s) 1111, 1902
Hsp92I GRCGYC 3 cut(s) 27, 90, 281
HspAI GCGC 1 cut(s) 2674
Kpn2I TCCGGA 2 cut(s) 1940, 2231
KroI GCCGGC 1 cut(s) 29
KroNI GCCGGC 1 cut(s) 31
Ksp22I TGATCA 3 cut(s) 1350, 2473, 3424
KspAI GTTAAC 1 cut(s) 549
LmnI GCTCC 8 cut(s) 1042, 1943, 2234, 2234, 2369, 2509, 2759, 3353
Lsp1109I GCAGC 7 cut(s) 1401, 2332, 2776, 3100, 3259, 3583, 3586
MaeII ACGT 2 cut(s) 1111, 1902
MbiI CCGCTC 1 cut(s) 2124
MfeI CAATTG 2 cut(s) 2477, 2831
MflI RGATCY 6 cut(s) 242, 641, 1079, 1177, 2615, 3143
MhlI GDGCHC 4 cut(s) 958, 1343, 2464, 2506
MlyI GAGTC 9 cut(s) 199, 713, 860, 1129, 1606, 2370, 2548, 2574, 3560
MmeI TCCRAC 6 cut(s) 48, 1668, 2326, 2610, 2619, 2950
Mph1103I ATGCAT 3 cut(s) 667, 2158, 2186
MreI CGCCGGCG 1 cut(s) 29
MroI TCCGGA 2 cut(s) 1940, 2231
MroNI GCCGGC 1 cut(s) 29
MroXI GAANNNNTTC 1 cut(s) 1735
MslI CAYNNNNRTG 6 cut(s) 1668, 1719, 2445, 2469, 2518, 3420
MspA1I CMGCKG 2 cut(s) 1070, 2789
MspI CCGG 9 cut(s) 30, 46, 60, 86, 462, 477, 633, 1941, 2232
MspR9I CCNGG 5 cut(s) 462, 478, 633, 924, 1757
MunI CAATTG 2 cut(s) 2477, 2831
Mva1269I GAATGC 3 cut(s) 1797, 3275, 3517
MvaI CCWGG 2 cut(s) 924, 1757
MvnI CGCG 1 cut(s) 182
NaeI GCCGGC 1 cut(s) 31
NciI CCSGG 3 cut(s) 462, 478, 633
NcoI CCATGG 1 cut(s) 144
NgoMIV GCCGGC 1 cut(s) 29
NheI GCTAGC 1 cut(s) 3133
NlaIV GGNNCC 7 cut(s) 64, 1555, 1945, 2541, 3035, 3145, 3349
NmeAIII GCCGAG 1 cut(s) 3524
NmuCI GTSAC 9 cut(s) 446, 1130, 1211, 1512, 1759, 2117, 2566, 3311, 3337
NsiI ATGCAT 3 cut(s) 667, 2158, 2186
NspI RCATGY 5 cut(s) 19, 1828, 1876, 1930, 2739
PaeR7I CTCGAG 1 cut(s) 2408
PaqCI CACCTGC 1 cut(s) 200
PciI ACATGT 4 cut(s) 15, 1872, 1926, 2735
PcsI WCGNNNNNNNCGW 1 cut(s) 243
PctI GAATGC 3 cut(s) 1797, 3275, 3517
PdiI GCCGGC 1 cut(s) 31
PdmI GAANNNNTTC 1 cut(s) 1735
PfeI GAWTC 9 cut(s) 234, 299, 350, 517, 1886, 2110, 3359, 3383, 3624
PflMI CCANNNNNTGG 2 cut(s) 1930, 1971
PleI GAGTC 9 cut(s) 198, 712, 859, 1128, 1605, 2370, 2548, 2573, 3560
PpsI GAGTC 9 cut(s) 198, 712, 859, 1128, 1605, 2370, 2548, 2573, 3560
Ppu21I YACGTR 1 cut(s) 1903
PscI ACATGT 4 cut(s) 15, 1872, 1926, 2735
PshBI ATTAAT 2 cut(s) 1857, 2951
Psp124BI GAGCTC 1 cut(s) 2464
Psp6I CCWGG 2 cut(s) 922, 1755
PspEI GGTNACC 4 cut(s) 1130, 1759, 2117, 3311
PspFI CCCAGC 1 cut(s) 2385
PspGI CCWGG 2 cut(s) 922, 1755
PspN4I GGNNCC 7 cut(s) 64, 1555, 1945, 2541, 3035, 3145, 3349
PspPI GGNCC 4 cut(s) 62, 2393, 2540, 3502
PspXI VCTCGAGB 1 cut(s) 2408
PstI CTGCAG 1 cut(s) 1391
PstNI CAGNNNCTG 2 cut(s) 680, 2792
PsuI RGATCY 6 cut(s) 242, 641, 1079, 1177, 2615, 3143
PvuII CAGCTG 2 cut(s) 1070, 2789
RsaI GTAC 6 cut(s) 595, 604, 895, 1330, 1444, 2824
RsaNI GTAC 6 cut(s) 594, 603, 894, 1329, 1443, 2823
RseI CAYNNNNRTG 6 cut(s) 1668, 1719, 2445, 2469, 2518, 3420
SacI GAGCTC 1 cut(s) 2464
Sau96I GGNCC 4 cut(s) 62, 2393, 2540, 3502
SchI GAGTC 9 cut(s) 199, 713, 860, 1129, 1606, 2370, 2548, 2574, 3560
ScrFI CCNGG 5 cut(s) 462, 478, 633, 924, 1757
SduI GDGCHC 4 cut(s) 958, 1343, 2464, 2506
SfcI CTRYAG 4 cut(s) 1387, 1452, 2043, 3534
Sfr274I CTCGAG 1 cut(s) 2408
SgrAI CRCCGGYG 1 cut(s) 29
SinI GGWCC 3 cut(s) 62, 2540, 3502
SlaI CTCGAG 1 cut(s) 2408
SmiMI CAYNNNNRTG 6 cut(s) 1668, 1719, 2445, 2469, 2518, 3420
SmlI CTYRAG 3 cut(s) 124, 2408, 2770
SmoI CTYRAG 3 cut(s) 124, 2408, 2770
SnaBI TACGTA 1 cut(s) 1903
SspI AATATT 2 cut(s) 1784, 3225
SstI GAGCTC 1 cut(s) 2464
StyD4I CCNGG 5 cut(s) 460, 476, 631, 922, 1755
StyI CCWWGG 2 cut(s) 144, 2549
TaaI ACNGT 7 cut(s) 452, 1456, 1813, 2495, 3005, 3085, 3469
TaiI ACGT 2 cut(s) 1114, 1905
TaqI TCGA 6 cut(s) 1744, 2168, 2409, 2854, 3066, 3420
TatI WGTACW 3 cut(s) 593, 1328, 2822
TauI GCSGC 6 cut(s) 36, 39, 95, 185, 281, 2385
TfiI GAWTC 9 cut(s) 234, 299, 350, 517, 1886, 2110, 3359, 3383, 3624
TseFI GTSAC 9 cut(s) 446, 1130, 1211, 1512, 1759, 2117, 2566, 3311, 3337
TseI GCWGC 7 cut(s) 1389, 2320, 2789, 3113, 3272, 3596, 3599
Tsp45I GTSAC 9 cut(s) 446, 1130, 1211, 1512, 1759, 2117, 2566, 3311, 3337
TspGWI ACGGA 4 cut(s) 235, 241, 1695, 2496
Van91I CCANNNNNTGG 2 cut(s) 1930, 1971
VneI GTGCAC 1 cut(s) 954
VpaK11BI GGWCC 3 cut(s) 62, 2540, 3502
VspI ATTAAT 2 cut(s) 1857, 2951
XagI CCTNNNNNAGG 1 cut(s) 1157
XapI RAATTY 8 cut(s) 568, 715, 1250, 1609, 2051, 2836, 3106, 3260
XceI RCATGY 5 cut(s) 19, 1828, 1876, 1930, 2739
XcmI CCANNNNNNNNNTGG 2 cut(s) 368, 1528
XhoI CTCGAG 1 cut(s) 2408
XmiI GTMKAC 2 cut(s) 1697, 3183
XmnI GAANNNNTTC 1 cut(s) 1735
Zsp2I ATGCAT 3 cut(s) 667, 2158, 2186
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.