Rh3AG264700

BRCA2, oligonucleotide/oligosaccharide-binding, domain 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0004075
Physical Location & Seq
Reverse (-)
29675270 .. 29683200
7931 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG264700.1

Sequence Viewer

Length: 3267 bp
ATGTCCACCTGGCACATGTTCTCCGACGCCGCCGGCGGCAATTTCCGGTGGCGAATATCCGGTCCCGACCCTAATACCCCACCGCCGGACGCGGCCTTCTATTCGGACAACGAAAATCTCAGCTCAAGCACTCGCCTGCCTTCCATGTCCGATCTGTTGCTTCAAGGCTGTTCAAAACTCGCGGCGGAGAGTCAGAGAAATCACGACGCAGGTGTTGCCATGTTTCGCAATGGATTCGGAAGATCCGTTTCCGTCAAGCCGTCGTCGTTAGCCAAAGCGGCGTCGCTTCTGAACTCCGAATCAGGCCGAATGAAAGGTATAGAAAGTGAGAGTAGAGGTGGTTTCGGTGATTCCCTTTTCCAGACTGCCTCTGGGAAGATGGTTAATATATCTTCCAAAGGTCTTGTCAAGGCCAAGAGATTGCTTGGTTTGGAAGATGATAATGGTGACTGTAATCTTCCCGGTTTCAGCAGTGCCGGGGTTAAGGATGCTGTATCGGTTTCAAGGTCTTCATTGAATCATACGACTGGTTCAGTGCAAACTGGGTTAACGAATGTGTCCAATCTGAATTCTGTGCAAGCTGAAGTGCCTAGTACAGCTCGTACACCTTCATCAGTCAAGTTACATACACCCGGAGGGAGATCAACTTCTGTTTCTAGTGATGCATTTAAGACAGTCCAGTTACATACACCCAGTGGTAGAACTTTGTCTGTTTCAACTGATGCACACAAGACTGGTTCAGTGCAAAGCAGATTTAAGAATGAGTCCAAACTAAATTATATGCAATCCGAGCCTAGTTCAGCTTGTACGCCTTCATCAGCCAAGCTACTTGCACCTGGAGGAAGCTCTAAATCTCTTTCCACCGGTGCACATAAGACTGGTTCTGTGCAAAGTGGAGTTACAAATGAGACTGATCCGAGTTTTATGCAATCCCAGAAGCCTAATTTAGCTCCCAAACCTCCATCAATCAAGTTCCATACAGCTGGAGGAAGATCTATATCTGTTTCCACTGATGCACTACAACGTGCAAGGAGTCTTCTTGGTGACCCAGACTTGGGAACTCTCCTGAATGAGGGGAACTCAGACTTGGATCAGACATTTCCAAAAGGTAGAGAACATGATAGTCACACTGCCTCTTCCCACCAGAAAATACCTAAGACCAAATTTTTAACGAAGAGTTTTGTATCTCCACTGCAATCATCCACTAATCAAGTGCGGACATCAGCAGTCAAGTCAGATAGTACAAATTGGGGCACTAACCTGATCAGCCAATTTGATGTTGTTAGCAATGAAAATGCCTGCAGGTCAAATGGTGAGTTACCTTGTGGGAAAAAACCCTTCAGCAACAAACCCCGTACCCTTACTACAGTAGAAAACAATTATTTGGCAAATGGCACTGGTGAAAGGATTAATCCTGTTGAAAGGTCACTAGCCAAGCCATTGGTGGATATTTCAAATACCATTGGCACCACTCCTCTGAGTAATATACAAATGACTGGTGTAAAGAGGAGGCTTGGAGGAAATTCTATTTCTCCATTCAAGAAGCCTCGCATTTCCAACTTCTCCACCCCATTGCATAAGAATGTTCCATGTGTTCCTAATGGTTTGTCTACCTTTCCGTCTGACCATTCAAGTGGCAAAAGAAGGGTTTCTACTCGATATCCTGTCCTGGTGACCAGAATGTCTTTGAAGAAATATTTTGGAATGCCACCAGCAGATCAAACCATGGTGGACTGCATGTCAGATCAGGTGAGAAGAGTTACAGCAATTAATGCAGAAAACTACATGTTTCCTGATGAATCTGGCTTAAACTACGTAGGGGCAGAAGCTTTTGTCCACATGTTGGCTTCTTCCGGAGCCTCAACACAAAATACTTCCAGAGAGTGGGTCATAAATCACTACAAGTGGATTGTCTGGAAACTGGCTTGTTATGAGAGATGCTATCCAGCTAAAGCTTTAGGAAATTTTTTGACACTGCCCAATGTGCTTGAAGAATTGAAGTATAGATATGAAAGAGAAGTGAATCATGGTCACCGCTCTGCAATTAAGAAAATACTGGAAGGAGATGCATCACCTTCTTCGATGTTGGTCTTATGCATTTCAGCTATTCGCTCAAAACCTGACCCAAATGTGGAGACTAGCTCCGGAGCTGAAAATAGTAGTGCCACAAAAGTTGAACTTACTGATGGGTGGTATTCAGTGGATGCTATTCTGGATGCTCTCCTATCAAAGCAGCTTGCTGGTGGAAAATTGTTTGTTGGACAGAAACTTCGGATTTGGGGAGCAGGACTCTGCGGCTGGGTTGGGCCTATTTCACCCCTCGAGGTGTCAAGAGAAGTTATGTTAAGGCTACACATAAATGGCACATATAGAGCTCATTGGGATGATCAATTGGGATTTTGCAACTGTGTTGGTGCTCCGTTAGCATTTAAGTGCATCAAGAGCGATGGGGGTCCAGTTCCTTGGACTCTTGTAGGAGTCACAAGGATATTCCCTGTTTTATACAAAGAAAGGTTAAGTAATGGAAGATCTGTTGTGAGGTCGGAGAGGTTGGAGACCAAAATGATGCAATCATATAGCCAGAGGCGCTCTAATGTTATTGAGGGCATTATTTCTGAGTTCCAAAGAGGATTAGAACATTCGCATACATGTAATGAGAGAGATAGTGAAGGAGCAAAACTCTTGAGGATACTAGAGACAGCTGCTGAACCAGAAGTTTTAATGGCAGAGATGAGTACAGAACAATTGAATTCTTTTACCAAATATCGAGCAAAATTAGAGGCAATCAAGCAATCAGACATGGAGAAATCAATTATGAAAGCACTAGAAGATGCTGGATTAGCTGAGAGGGAAGTGATGCCATTAATGAGGGTGAGGGTAGTTGGACTAACTAGAAACTTATATGAAGGAGAAGACAGTCCCAAAGAAGGCTTAATAACAATCTGGAACCCATCAGAGAACCAGAAGTCTGAGTTGGTCGAGGGGCAAGCATATACTGTTTCTGACCTTATACCAACAAATTTGGCTGCTGATATTCTATACTTGCTAGCAAGAGGATCCAAAACGAAATGGAAGCCTTTATGTCAGCAGGCAGTAGACCACTTTAAGCCCTTTTTTAGTCCTCGCAAATCAATACTATTGTCAGATTTTGGTCAAGTTCCTCTTTCCAGGGTTCGTTCTGCAGTGAATTTGATATTGCTGCATTCGTTGTGTTTGTGGGGGAGGTTTATGTCGCTGGTCACCAGAAGAAACAGTGGGTGTTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000228 GO:0000278 GO:0000280 GO:0000281 GO:0000722 GO:0000723 GO:0000724 GO:0000725 GO:0000781 GO:0000784 GO:0000793 GO:0000794 GO:0000795 GO:0000800 GO:0000910 GO:0001556 GO:0001701 GO:0001824 GO:0001832 GO:0001833 GO:0002020 GO:0002376 GO:0002520 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0004402 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005739 GO:0005813 GO:0005815 GO:0005829 GO:0005856 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006281 GO:0006289 GO:0006302 GO:0006310 GO:0006312 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006974 GO:0006978 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007059 GO:0007098 GO:0007127 GO:0007140 GO:0007141 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0007281 GO:0007283 GO:0007292 GO:0007346 GO:0007399 GO:0007417 GO:0007420 GO:0007548 GO:0007568 GO:0007569 GO:0008022 GO:0008080 GO:0008092 GO:0008104 GO:0008150 GO:0008152 GO:0008156 GO:0008219 GO:0008283 GO:0008285 GO:0008406 GO:0008585 GO:0008608 GO:0008630 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009790 GO:0009792 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0009994 GO:0010165 GO:0010212 GO:0010225 GO:0010332 GO:0010468 GO:0010484 GO:0010485 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0012501 GO:0012505 GO:0015630 GO:0015631 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019953 GO:0021700 GO:0022402 GO:0022412 GO:0022414 GO:0023052 GO:0030097 GO:0030141 GO:0030154 GO:0030330 GO:0030879 GO:0031023 GO:0031297 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031410 GO:0031619 GO:0031974 GO:0031981 GO:0031982 GO:0032200 GO:0032465 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033036 GO:0033260 GO:0033365 GO:0033554 GO:0033593 GO:0033599 GO:0033600 GO:0034212 GO:0034502 GO:0034613 GO:0034641 GO:0034645 GO:0035264 GO:0035556 GO:0036211 GO:0040007 GO:0042127 GO:0042592 GO:0042770 GO:0042771 GO:0042772 GO:0042802 GO:0043009 GO:0043015 GO:0043060 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0043967 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0044703 GO:0044786 GO:0045005 GO:0045132 GO:0045137 GO:0045143 GO:0045184 GO:0045787 GO:0045893 GO:0045931 GO:0045934 GO:0045935 GO:0046483 GO:0046545 GO:0046660 GO:0048232 GO:0048285 GO:0048468 GO:0048469 GO:0048477 GO:0048478 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048534 GO:0048589 GO:0048599 GO:0048608 GO:0048609 GO:0048731 GO:0048732 GO:0048856 GO:0048869 GO:0050000 GO:0050678 GO:0050680 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051093 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0051252 GO:0051254 GO:0051276 GO:0051298 GO:0051301 GO:0051302 GO:0051303 GO:0051310 GO:0051311 GO:0051316 GO:0051321 GO:0051455 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051704 GO:0051716 GO:0051726 GO:0060249 GO:0060255 GO:0060322 GO:0061458 GO:0061640 GO:0061733 GO:0061982 GO:0065007 GO:0065008 GO:0070013 GO:0070198 GO:0070199 GO:0070200 GO:0070727 GO:0071695 GO:0071704 GO:0071840 GO:0072331 GO:0072332 GO:0072594 GO:0080090 GO:0090304 GO:0090329 GO:0097159 GO:0097190 GO:0097193 GO:0097708 GO:0098687 GO:0098813 GO:0099086 GO:0099503 GO:0140013 GO:1901360 GO:1901363 GO:1901564 GO:1901576 GO:1902298 GO:1902680 GO:1902969 GO:1903046 GO:1903047 GO:1903506 GO:1903508 GO:1990426 GO:1990505 GO:2000026 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03440 ko03460 ko05200 ko05212 ko05224 map03440 map03460 map05200 map05212 map05224
Pfam Domains
Protein Families
BRCA-2_OB1 BRCA-2_helical BRCA2

Protein Analysis

1088

Amino Acids

118.62

Weight (kDa)

9.35

Isoelectric Point (pI)

43.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCA2 PF00634 118 - 143 6e-06 BRCA2 repeat
BRCA2 PF00634 325 - 349 2.1e-06 BRCA2 repeat
BRCA-2_helical PF09169 593 - 676 1.1e-16 BRCA2, helical
BRCA-2_OB1 PF09103 680 - 801 1.8e-40 BRCA2, oligonucleotide/oligosaccharide-binding, domain 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 200
AasI GACNNNNNNGTC 1 cut(s) 1681
AbsI CCTCGAGG 1 cut(s) 2321
Acc36I ACCTGC 2 cut(s) 200, 1293
AccB1I GGYRCC 1 cut(s) 1466
AccB7I CCANNNNNTGG 2 cut(s) 1843, 1884
AccBSI CCGCTC 1 cut(s) 2037
AccI GTMKAC 2 cut(s) 1610, 3096
AccII CGCG 2 cut(s) 92, 182
AccIII TCCGGA 2 cut(s) 1853, 2144
AclWI GGATC 5 cut(s) 237, 908, 1098, 3051, 3064
AcsI RAATTY 7 cut(s) 568, 1163, 1522, 1963, 2749, 3019, 3187
AcuI CTGAAG 2 cut(s) 603, 1324
AcyI GRCGYC 2 cut(s) 27, 281
AdeI CACNNNGTG 1 cut(s) 695
AfaI GTAC 6 cut(s) 595, 604, 808, 1243, 1357, 2737
AfiI CCNNNNNNNGG 8 cut(s) 85, 1054, 1055, 1072, 1843, 1884, 2131, 2927
AflIII ACRYGT 4 cut(s) 15, 1785, 1839, 2648
AgeI ACCGGT 1 cut(s) 863
AhdI GACNNNNNGTC 1 cut(s) 1738
AjnI CCWGG 4 cut(s) 8, 835, 1668, 3167
AjuI GAANNNNNNNTTGG 4 cut(s) 1070, 1102, 2957, 2989
Alw21I GWGCWC 3 cut(s) 871, 2377, 2419
Alw26I GTCTC 4 cut(s) 902, 2129, 2549, 2690
Alw44I GTGCAC 1 cut(s) 867
AlwI GGATC 5 cut(s) 237, 908, 1098, 3051, 3064
AlwNI CAGNNNCTG 1 cut(s) 2705
Ama87I CYCGRG 1 cut(s) 2321
Aor13HI TCCGGA 2 cut(s) 1853, 2144
AoxI GGCC 4 cut(s) 93, 304, 411, 2306
ApaLI GTGCAC 1 cut(s) 867
ApeKI GCWGC 4 cut(s) 2233, 2702, 3026, 3199
ApoI RAATTY 7 cut(s) 568, 1163, 1522, 1963, 2749, 3019, 3187
ArsI GACNNNNNNTTYG 6 cut(s) 46, 78, 390, 422, 2253, 2285
AseI ATTAAT 3 cut(s) 1410, 1770, 2864
AsiGI ACCGGT 1 cut(s) 863
Asp700I GAANNNNTTC 1 cut(s) 1648
AspLEI GCGC 1 cut(s) 2589
AspS9I GGNCC 3 cut(s) 62, 2306, 2453
AsuC2I CCSGG 3 cut(s) 462, 478, 633
AsuNHI GCTAGC 1 cut(s) 3046
AvaI CYCGRG 1 cut(s) 2321
AvaII GGWCC 2 cut(s) 62, 2453
BaeGI GKGCMC 2 cut(s) 871, 1256
BamHI GGATCC 1 cut(s) 3056
BanI GGYRCC 1 cut(s) 1466
BanII GRGCYC 1 cut(s) 2377
BarI GAAGNNNNNNTAC 2 cut(s) 1636, 1668
BbsI GAAGAC 3 cut(s) 501, 1028, 2919
Bbv12I GWGCWC 3 cut(s) 871, 2377, 2419
BbvI GCAGC 4 cut(s) 2245, 2689, 3013, 3186
BccI CCATC 5 cut(s) 373, 970, 2180, 2441, 2959
BceAI ACGGC 1 cut(s) 244
BcgI CGANNNNNNTGC 4 cut(s) 217, 251, 907, 941
BciT130I CCWGG 4 cut(s) 10, 837, 1670, 3169
BciVI GTATCC 1 cut(s) 2682
BclI TGATCA 2 cut(s) 1263, 2386
BcnI CCSGG 3 cut(s) 462, 478, 633
BcoDI GTCTC 4 cut(s) 902, 2129, 2549, 2690
BfaI CTAG 9 cut(s) 591, 657, 795, 1430, 2139, 2693, 2825, 2892, 3047
BfmI CTRYAG 3 cut(s) 1300, 1365, 3180
BfoI RGCGCY 1 cut(s) 2590
BfuAI ACCTGC 2 cut(s) 200, 1293
BfuI GTATCC 1 cut(s) 2682
BglI GCCNNNNNGGC 1 cut(s) 278
BglII AGATCT 2 cut(s) 992, 2528
Bme1390I CCNGG 7 cut(s) 10, 462, 478, 633, 837, 1670, 3169
Bme18I GGWCC 2 cut(s) 62, 2453
BmeRI GACNNNNNGTC 1 cut(s) 1738
BmeT110I CYCGRG 1 cut(s) 2321
BmgT120I GGNCC 3 cut(s) 62, 2306, 2453
BmiI GGNNCC 6 cut(s) 64, 1468, 1858, 2454, 2948, 3058
BmrFI CCNGG 7 cut(s) 10, 462, 478, 633, 837, 1670, 3169
BmrI ACTGGG 2 cut(s) 552, 687
BmtI GCTAGC 1 cut(s) 3050
BmuI ACTGGG 2 cut(s) 552, 687
BpiI GAAGAC 3 cut(s) 501, 1028, 2919
BplI GAGNNNNNCTC 8 cut(s) 1064, 1096, 2126, 2158, 2274, 2306, 2664, 2696
BpmI CTGGAG 2 cut(s) 858, 1005
BpuEI CTTGAG 2 cut(s) 109, 2704
BpuMI CCSGG 3 cut(s) 462, 478, 633
BsaAI YACGTR 1 cut(s) 1816
BsaBI GATNNNNATC 1 cut(s) 997
BsaHI GRCGYC 2 cut(s) 27, 281
BsaI GGTCTC 1 cut(s) 2549
BsaJI CCNNGG 4 cut(s) 477, 1725, 2462, 3168
BsaWI WCCGGW 5 cut(s) 45, 59, 863, 1853, 2144
BsaXI ACNNNNNCTCC 2 cut(s) 5, 35
Bsc4I CCNNNNNNNGG 8 cut(s) 85, 1054, 1055, 1072, 1843, 1884, 2131, 2927
Bse118I RCCGGY 2 cut(s) 32, 863
Bse3DI GCAATG 3 cut(s) 235, 1294, 1571
Bse8I GATNNNNATC 1 cut(s) 997
BseAI TCCGGA 2 cut(s) 1853, 2144
BseBI CCWGG 4 cut(s) 10, 837, 1670, 3169
BseDI CCNNGG 4 cut(s) 477, 1725, 2462, 3168
BseGI GGATG 5 cut(s) 493, 1199, 2209, 2221, 2389
BseJI GATNNNNATC 1 cut(s) 997
BseLI CCNNNNNNNGG 8 cut(s) 85, 1054, 1055, 1072, 1843, 1884, 2131, 2927
BseMI GCAATG 3 cut(s) 235, 1294, 1571
BseMII CTCAG 6 cut(s) 133, 1095, 1469, 2607, 2835, 2961
BseRI GAGGAG 2 cut(s) 1464, 1522
BseSI GKGCMC 2 cut(s) 871, 1256
BseXI GCAGC 4 cut(s) 2245, 2689, 3013, 3186
BseYI CCCAGC 1 cut(s) 2298
Bsh1236I CGCG 2 cut(s) 92, 182
BshFI GGCC 4 cut(s) 95, 306, 413, 2308
BshNI GGYRCC 1 cut(s) 1466
BshTI ACCGGT 1 cut(s) 863
BsiHKAI GWGCWC 3 cut(s) 871, 2377, 2419
BsiHKCI CYCGRG 1 cut(s) 2321
BslFI GGGAC 2 cut(s) 48, 2904
BslI CCNNNNNNNGG 8 cut(s) 85, 1054, 1055, 1072, 1843, 1884, 2131, 2927
BsmAI GTCTC 4 cut(s) 902, 2129, 2549, 2690
BsmFI GGGAC 2 cut(s) 48, 2904
BsmI GAATGC 2 cut(s) 1710, 3202
BsnI GGCC 4 cut(s) 95, 306, 413, 2308
Bso31I GGTCTC 1 cut(s) 2549
BsoBI CYCGRG 1 cut(s) 2321
Bsp1286I GDGCHC 4 cut(s) 871, 1256, 2377, 2419
Bsp13I TCCGGA 2 cut(s) 1853, 2144
Bsp19I CCATGG 1 cut(s) 1725
BspANI GGCC 4 cut(s) 95, 306, 413, 2308
BspCNI CTCAG 6 cut(s) 132, 1094, 1470, 2608, 2836, 2962
BspEI TCCGGA 2 cut(s) 1853, 2144
BspFNI CGCG 2 cut(s) 92, 182
BspLI GGNNCC 6 cut(s) 64, 1468, 1858, 2454, 2948, 3058
BspMAI CTGCAG 2 cut(s) 1304, 3184
BspMI ACCTGC 2 cut(s) 200, 1293
BspOI GCTAGC 1 cut(s) 3050
BspPI GGATC 5 cut(s) 237, 908, 1098, 3051, 3064
BspT107I GGYRCC 1 cut(s) 1466
BspTNI GGTCTC 1 cut(s) 2549
BsrBI CCGCTC 1 cut(s) 2037
BsrDI GCAATG 3 cut(s) 235, 1294, 1571
BsrFI RCCGGY 2 cut(s) 32, 863
BssAI RCCGGY 2 cut(s) 32, 863
BssECI CCNNGG 4 cut(s) 477, 1725, 2462, 3168
BssNI GRCGYC 2 cut(s) 27, 281
BssT1I CCWWGG 2 cut(s) 1725, 2462
Bst2UI CCWGG 4 cut(s) 10, 837, 1670, 3169
Bst4CI ACNGT 7 cut(s) 452, 676, 1369, 2408, 2918, 2998, 3254
Bst6I CTCTTC 3 cut(s) 1141, 1169, 1750
BstACI GRCGYC 2 cut(s) 27, 281
BstAPI GCANNNNNTGC 2 cut(s) 215, 1772
BstBAI YACGTR 1 cut(s) 1816
BstC8I GCNNGC 8 cut(s) 34, 137, 579, 1300, 2238, 2988, 3048, 3090
BstDEI CTNAG 7 cut(s) 119, 1081, 1155, 1478, 2616, 2844, 2970
BstDSI CCRYGG 1 cut(s) 1725
BstEII GGTNACC 4 cut(s) 1043, 1672, 2030, 3238
BstENI CCTNNNNNAGG 1 cut(s) 1070
BstF5I GGATG 5 cut(s) 493, 1199, 2209, 2221, 2389
BstFNI CGCG 2 cut(s) 92, 182
BstH2I RGCGCY 1 cut(s) 2590
BstHHI GCGC 1 cut(s) 2589
BstMAI GTCTC 4 cut(s) 902, 2129, 2549, 2690
BstMWI GCNNNNNNNGC 9 cut(s) 215, 278, 790, 1772, 1984, 2423, 2442, 2586, 2840
BstNI CCWGG 4 cut(s) 10, 837, 1670, 3169
BstNSI RCATGY 5 cut(s) 19, 1741, 1789, 1843, 2652
BstPI GGTNACC 4 cut(s) 1043, 1672, 2030, 3238
BstSCI CCNGG 7 cut(s) 8, 460, 476, 631, 835, 1668, 3167
BstSFI CTRYAG 3 cut(s) 1300, 1365, 3180
BstSLI GKGCMC 2 cut(s) 871, 1256
BstSNI TACGTA 1 cut(s) 1816
BstUI CGCG 2 cut(s) 92, 182
BstV1I GCAGC 4 cut(s) 2245, 2689, 3013, 3186
BstV2I GAAGAC 3 cut(s) 501, 1028, 2919
BstX2I RGATCY 4 cut(s) 242, 992, 2528, 3056
BstXI CCANNNNNNTGG 4 cut(s) 983, 1441, 1634, 2463
BstYI RGATCY 4 cut(s) 242, 992, 2528, 3056
BsuI GTATCC 1 cut(s) 2682
BsuRI GGCC 4 cut(s) 95, 306, 413, 2308
BtgI CCRYGG 1 cut(s) 1725
BtgZI GCGATG 1 cut(s) 2460
BtsCI GGATG 5 cut(s) 493, 1199, 2209, 2221, 2389
BtsI GCAGTG 5 cut(s) 478, 1128, 1190, 1973, 3189
BveI ACCTGC 2 cut(s) 200, 1293
Cac8I GCNNGC 8 cut(s) 34, 137, 579, 1300, 2238, 2988, 3048, 3090
CaiI CAGNNNCTG 1 cut(s) 2705
CfoI GCGC 1 cut(s) 2589
Cfr10I RCCGGY 2 cut(s) 32, 863
Cfr13I GGNCC 3 cut(s) 62, 2306, 2453
CseI GACGC 4 cut(s) 35, 98, 215, 270
Csp6I GTAC 6 cut(s) 594, 603, 807, 1242, 1356, 2736
CspAI ACCGGT 1 cut(s) 863
CspCI CAANNNNNGTGG 2 cut(s) 2155, 2190
CviQI GTAC 6 cut(s) 594, 603, 807, 1242, 1356, 2736
DdeI CTNAG 7 cut(s) 119, 1081, 1155, 1478, 2616, 2844, 2970
DraIII CACNNNGTG 1 cut(s) 695
DrdI GACNNNNNNGTC 1 cut(s) 1681
DriI GACNNNNNGTC 1 cut(s) 1738
DseDI GACNNNNNNGTC 1 cut(s) 1681
Eam1104I CTCTTC 3 cut(s) 1141, 1169, 1750
Eam1105I GACNNNNNGTC 1 cut(s) 1738
EarI CTCTTC 3 cut(s) 1141, 1169, 1750
EciI GGCGGA 1 cut(s) 200
Ecl136II GAGCTC 1 cut(s) 2375
Eco105I TACGTA 1 cut(s) 1816
Eco130I CCWWGG 2 cut(s) 1725, 2462
Eco24I GRGCYC 1 cut(s) 2377
Eco31I GGTCTC 1 cut(s) 2549
Eco32I GATATC 1 cut(s) 1661
Eco47I GGWCC 2 cut(s) 62, 2453
Eco53kI GAGCTC 1 cut(s) 2375
Eco57I CTGAAG 2 cut(s) 603, 1324
Eco88I CYCGRG 1 cut(s) 2321
Eco91I GGTNACC 4 cut(s) 1043, 1672, 2030, 3238
EcoICRI GAGCTC 1 cut(s) 2375
EcoNI CCTNNNNNAGG 1 cut(s) 1070
EcoO65I GGTNACC 4 cut(s) 1043, 1672, 2030, 3238
EcoRI GAATTC 2 cut(s) 568, 2749
EcoRII CCWGG 4 cut(s) 8, 835, 1668, 3167
EcoRV GATATC 1 cut(s) 1661
EcoT14I CCWWGG 2 cut(s) 1725, 2462
EcoT22I ATGCAT 3 cut(s) 667, 2071, 2099
EcoT38I GRGCYC 1 cut(s) 2377
ErhI CCWWGG 2 cut(s) 1725, 2462
FalI AAGNNNNNCTT 4 cut(s) 2163, 2195, 3147, 3179
FaqI GGGAC 2 cut(s) 48, 2904
FbaI TGATCA 2 cut(s) 1263, 2386
FblI GTMKAC 2 cut(s) 1610, 3096
FokI GGATG 5 cut(s) 500, 1186, 2216, 2228, 2396
FriOI GRGCYC 1 cut(s) 2377
FspBI CTAG 9 cut(s) 591, 657, 795, 1430, 2139, 2693, 2825, 2892, 3047
GlaI GCGC 1 cut(s) 2588
GsaI CCCAGC 1 cut(s) 2302
GsuI CTGGAG 2 cut(s) 858, 1005
HaeII RGCGCY 1 cut(s) 2590
HaeIII GGCC 4 cut(s) 95, 306, 413, 2308
HgaI GACGC 4 cut(s) 35, 98, 215, 270
HhaI GCGC 1 cut(s) 2589
Hin1I GRCGYC 2 cut(s) 27, 281
Hin6I GCGC 1 cut(s) 2587
HinP1I GCGC 1 cut(s) 2587
HincII GTYRAC 1 cut(s) 549
HindII GTYRAC 1 cut(s) 549
HindIII AAGCTT 2 cut(s) 1827, 1953
HpaI GTTAAC 1 cut(s) 549
Hpy166II GTNNAC 8 cut(s) 6, 549, 605, 869, 1611, 1732, 1837, 3097
Hpy8I GTNNAC 8 cut(s) 6, 549, 605, 869, 1611, 1732, 1837, 3097
Hpy99I CGWCG 5 cut(s) 29, 209, 265, 268, 286
HpyCH4III ACNGT 7 cut(s) 452, 676, 1369, 2408, 2918, 2998, 3254
HpyCH4IV ACGT 2 cut(s) 1024, 1815
HpyF10VI GCNNNNNNNGC 9 cut(s) 215, 278, 790, 1772, 1984, 2423, 2442, 2586, 2840
HpyF3I CTNAG 7 cut(s) 119, 1081, 1155, 1478, 2616, 2844, 2970
HpySE526I ACGT 2 cut(s) 1024, 1815
Hsp92I GRCGYC 2 cut(s) 27, 281
HspAI GCGC 1 cut(s) 2587
Kpn2I TCCGGA 2 cut(s) 1853, 2144
KroI GCCGGC 1 cut(s) 32
KroNI GCCGGC 1 cut(s) 34
Ksp22I TGATCA 2 cut(s) 1263, 2386
KspAI GTTAAC 1 cut(s) 549
LmnI GCTCC 7 cut(s) 955, 1856, 2147, 2147, 2282, 2422, 2672
Lsp1109I GCAGC 4 cut(s) 2245, 2689, 3013, 3186
MaeI CTAG 9 cut(s) 591, 657, 795, 1430, 2139, 2693, 2825, 2892, 3047
MaeII ACGT 2 cut(s) 1024, 1815
MbiI CCGCTC 1 cut(s) 2037
MfeI CAATTG 2 cut(s) 2390, 2744
MflI RGATCY 4 cut(s) 242, 992, 2528, 3056
MhlI GDGCHC 4 cut(s) 871, 1256, 2377, 2419
MlyI GAGTC 6 cut(s) 199, 773, 1042, 2283, 2461, 2487
MmeI TCCRAC 6 cut(s) 48, 1581, 2239, 2523, 2532, 2863
Mph1103I ATGCAT 3 cut(s) 667, 2071, 2099
MreI CGCCGGCG 1 cut(s) 32
MroI TCCGGA 2 cut(s) 1853, 2144
MroNI GCCGGC 1 cut(s) 32
MroXI GAANNNNTTC 1 cut(s) 1648
MslI CAYNNNNRTG 5 cut(s) 1581, 1632, 2358, 2382, 2431
MspA1I CMGCKG 2 cut(s) 983, 2702
MspR9I CCNGG 7 cut(s) 10, 462, 478, 633, 837, 1670, 3169
MunI CAATTG 2 cut(s) 2390, 2744
Mva1269I GAATGC 2 cut(s) 1710, 3202
MvaI CCWGG 4 cut(s) 10, 837, 1670, 3169
MvnI CGCG 2 cut(s) 92, 182
MwoI GCNNNNNNNGC 9 cut(s) 215, 278, 790, 1772, 1984, 2423, 2442, 2586, 2840
NaeI GCCGGC 1 cut(s) 34
NciI CCSGG 3 cut(s) 462, 478, 633
NcoI CCATGG 1 cut(s) 1725
NgoMIV GCCGGC 1 cut(s) 32
NheI GCTAGC 1 cut(s) 3046
NlaIV GGNNCC 6 cut(s) 64, 1468, 1858, 2454, 2948, 3058
NmuCI GTSAC 8 cut(s) 446, 1043, 1124, 1425, 1672, 2030, 2479, 3238
NsiI ATGCAT 3 cut(s) 667, 2071, 2099
NspI RCATGY 5 cut(s) 19, 1741, 1789, 1843, 2652
PaeR7I CTCGAG 1 cut(s) 2321
PaqCI CACCTGC 1 cut(s) 200
PciI ACATGT 4 cut(s) 15, 1785, 1839, 2648
PcsI WCGNNNNNNNCGW 1 cut(s) 243
PctI GAATGC 2 cut(s) 1710, 3202
PdiI GCCGGC 1 cut(s) 34
PdmI GAANNNNTTC 1 cut(s) 1648
PfeI GAWTC 6 cut(s) 234, 299, 350, 517, 1799, 2023
PflMI CCANNNNNTGG 2 cut(s) 1843, 1884
PinAI ACCGGT 1 cut(s) 863
PleI GAGTC 6 cut(s) 198, 772, 1041, 2283, 2461, 2486
PpsI GAGTC 6 cut(s) 198, 772, 1041, 2283, 2461, 2486
Ppu21I YACGTR 1 cut(s) 1816
PscI ACATGT 4 cut(s) 15, 1785, 1839, 2648
PshBI ATTAAT 3 cut(s) 1410, 1770, 2864
Psp124BI GAGCTC 1 cut(s) 2377
Psp6I CCWGG 4 cut(s) 8, 835, 1668, 3167
PspEI GGTNACC 4 cut(s) 1043, 1672, 2030, 3238
PspFI CCCAGC 1 cut(s) 2298
PspGI CCWGG 4 cut(s) 8, 835, 1668, 3167
PspN4I GGNNCC 6 cut(s) 64, 1468, 1858, 2454, 2948, 3058
PspPI GGNCC 3 cut(s) 62, 2306, 2453
PspXI VCTCGAGB 1 cut(s) 2321
PstI CTGCAG 2 cut(s) 1304, 3184
PstNI CAGNNNCTG 1 cut(s) 2705
PsuI RGATCY 4 cut(s) 242, 992, 2528, 3056
PvuII CAGCTG 2 cut(s) 983, 2702
RsaI GTAC 6 cut(s) 595, 604, 808, 1243, 1357, 2737
RsaNI GTAC 6 cut(s) 594, 603, 807, 1242, 1356, 2736
RseI CAYNNNNRTG 5 cut(s) 1581, 1632, 2358, 2382, 2431
SacI GAGCTC 1 cut(s) 2377
Sau96I GGNCC 3 cut(s) 62, 2306, 2453
SbfI CCTGCAGG 1 cut(s) 1304
SchI GAGTC 6 cut(s) 199, 773, 1042, 2283, 2461, 2487
ScrFI CCNGG 7 cut(s) 10, 462, 478, 633, 837, 1670, 3169
SdaI CCTGCAGG 1 cut(s) 1304
SduI GDGCHC 4 cut(s) 871, 1256, 2377, 2419
SfcI CTRYAG 3 cut(s) 1300, 1365, 3180
Sfr274I CTCGAG 1 cut(s) 2321
SgrAI CRCCGGYG 2 cut(s) 32, 863
SinI GGWCC 2 cut(s) 62, 2453
SlaI CTCGAG 1 cut(s) 2321
SmiMI CAYNNNNRTG 5 cut(s) 1581, 1632, 2358, 2382, 2431
SmlI CTYRAG 3 cut(s) 124, 2321, 2683
SmoI CTYRAG 3 cut(s) 124, 2321, 2683
SnaBI TACGTA 1 cut(s) 1816
Sse8387I CCTGCAGG 1 cut(s) 1304
SspI AATATT 1 cut(s) 1697
SspMI CTAG 9 cut(s) 591, 657, 795, 1430, 2139, 2693, 2825, 2892, 3047
SstI GAGCTC 1 cut(s) 2377
StyD4I CCNGG 7 cut(s) 8, 460, 476, 631, 835, 1668, 3167
StyI CCWWGG 2 cut(s) 1725, 2462
TaaI ACNGT 7 cut(s) 452, 676, 1369, 2408, 2918, 2998, 3254
TaiI ACGT 2 cut(s) 1027, 1818
TaqI TCGA 5 cut(s) 1657, 2081, 2322, 2767, 2979
TatI WGTACW 3 cut(s) 593, 1241, 2735
TauI GCSGC 6 cut(s) 32, 39, 95, 185, 281, 2298
TfiI GAWTC 6 cut(s) 234, 299, 350, 517, 1799, 2023
TseFI GTSAC 8 cut(s) 446, 1043, 1124, 1425, 1672, 2030, 2479, 3238
TseI GCWGC 4 cut(s) 2233, 2702, 3026, 3199
Tsp45I GTSAC 8 cut(s) 446, 1043, 1124, 1425, 1672, 2030, 2479, 3238
TspDTI ATGAA 9 cut(s) 326, 501, 600, 804, 1305, 1812, 2025, 2831, 2919
TspGWI ACGGA 4 cut(s) 235, 241, 1608, 2409
Van91I CCANNNNNTGG 2 cut(s) 1843, 1884
VneI GTGCAC 1 cut(s) 867
VpaK11BI GGWCC 2 cut(s) 62, 2453
VspI ATTAAT 3 cut(s) 1410, 1770, 2864
XagI CCTNNNNNAGG 1 cut(s) 1070
XapI RAATTY 7 cut(s) 568, 1163, 1522, 1963, 2749, 3019, 3187
XceI RCATGY 5 cut(s) 19, 1741, 1789, 1843, 2652
XcmI CCANNNNNNNNNTGG 2 cut(s) 368, 1441
XhoI CTCGAG 1 cut(s) 2321
XmiI GTMKAC 2 cut(s) 1610, 3096
XmnI GAANNNNTTC 1 cut(s) 1648
XspI CTAG 9 cut(s) 591, 657, 795, 1430, 2139, 2693, 2825, 2892, 3047
Zsp2I ATGCAT 3 cut(s) 667, 2071, 2099
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.