Rmu_sc0005946.1_g000002

BRCA2, oligonucleotide/oligosaccharide-binding, domain 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005946.1
OG0004075
Physical Location & Seq
Forward (+)
6114 .. 12630
6517 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005946.1_g000002.1.cds

Sequence Viewer

Length: 3402 bp
atgtttcgcaatggattcggaagatccgtttccgtcaagccgtcgtcgttagccaaagcggcgtcgcttctgaactccgaatcaggccgaatgaaaggtatagaaagtgagagtagaggtggtttcggtgattcccttttccagactgcctctgggaagatggttaatatatcttccaaaggtcttgtcaaggccaagagattgcttggtttggaagatgataatggtgactgtaatcttcccggtttcagcagtgccggggttaaggatgctgtatcggtttcaaggtcttcgttgaatcatacgactggttcagtgcaaactgggttaaggaatgtgtccaatctgacttctgtgcaagctgaagtgcctagtacagctcgtacaccttcatcagtcaagttacatacacccggagggagatctacttctgtttctagtgatgcatttaagacaggttctgtgcagagtagatgtaagaatgagtctaaccagaattttatgcaatccgagatgactaattcagtttctacactttcatcagtccagttacatacacccggtggaagaactttgtctgtttcaactgatgcacacaagactggttcagtgaaaagtagatttaagaatgagtcaaaactaaattatatgcaatctgagcctagttcagcttgtacgccttcatcagccaagctacttgcacctggaggaagctctaaatctctttccactggtgcacataagactggttctgtgcaaagtggagttacaaatgagactgatccgagttttatgcaatcccagaagcctaatttagctcccaaacctccatcaatcaagttccatacagctggaggaagatctatatctgtttcaactgatgcactacaacgtgcaaggagtcttcttggtgacccagacttgggaactctcctgaatgaggggaactcagacttggatctgacatttccaaaaggtagagaacatgatagtcacactgcctcttcccaccagaaaatacctaagaccaaatttttaacgaagagttttgtatctccactgcaatcatccactaatcaagtgcggacatcagcagtcaagtcagatagtacaaattggggcactaacctgatcagccaatttgatgttgttagcaatgaaaatgcctgcagctcaaatggtgagttaccttgtgggaaaaaacccttcagcaacaaaccccgtacccttactacagtagaaaacaattatttggcaaatggcactggtgaaaggattaatcctgttgaaaggtcactagccaagccattggtggatatttcaaataccattggcaccactcctctgagtaatatacaaatgactggtgtaaagaggagtcttggaggaaattctatttctccattcaagaagcctcgcatttccaacttctccactccattgcataagaatgttccatgtgttcctaatggtttgtctacctttccgtctgaccattcaagtggcaaaagaagcgtttctactcgatatcctgtcctggtgaccagaatgtctttgaagaaatattttggaatgccaccatcagatcaaaccgtggtggactgcatgtcagatcaggtgagaagagttacagcaattaatgcagaaaactacatgttttctgatgaatctggcttaaactacgtaggggcagaagcttttgtccacatgttggcttcttccggagcctcaacacaaaatacttccagagagtgggtcgtaaatcactacaagtggattgtctggaaactggcttgttatgagagatgctatccagctaaagctttaggaaaatttttgacactgcccaatgtgcttgaagaattgaagtatagatatgaaagagaagtgaatcatggtcaccgctctgcaattaagaaaatactggaaggagatgcatcaccttcttcgatgttggtcttatgcatttcagctattcgctcaaaacctgacccaaatatggagactagctccggagctgaaaatagtagtgccacaaaagttgaacttactgatgggtggtattcagtggatgctattctggatgctctcctatcaaagcagcttgctagtggaaaaatgtttgttggacagaaacttcggatttggggagcaggactctgcggctgggttgggcctatttcacccctcgaggtgtcaagagaagttatgttaaggctacacataaatggcacatatagagctcattgggatgatcaattgggattttgcaactgtgttggtgctccgttagcatttaagtgcatcaagagcgatgggggtccagttccttggactcttgtaggagtcacaaggatattccctgttttatacaaagaaaggttaagtaatggaagatctgttgtgaggtcggagaggttggagaccaaaatgatgcaatcatatagccagaggcgctctaatgttattgagggcattatttctgagttccaaagaggattagaacattcgcatacatgtaatgagagagatagtgaaggagcaaaactcttgaggatactagagacagctgctgaaccagaagttttaatggcagagatgagtacagaacaattgaattcttttaccaaatatcgagcaaaattagaggcaatcaagcagtcagacatggagaaatcaattatgaaagcactagatgatgctggattagctgagagggaagtgatgccattaatgagggtgagggtagttggactaactagaaacttatatgaaggagaagacagtcccaaagaaggcttaataacaatctggaacccatcagagaaccagaagtctgagttggtcgaggggcaagcatatactgtttctgaccttataccaacaaattcggctggtattctatacttgctagcaagaggatccaaaacgaaatggaagcctttatgtcagcaggcaggtttgttctgcagtgagtttgatattgctgcattcgttgtgtttgtgggggaggtttatgtcgctggtcaccagaagaaacaatgggtgtttgtgacagatggctccatttctgaatcaaagtcagaagaattaaacgattctctacttgccatctgcttctgttcaccgcatatcgatgatcaatcagatgttcctataaactacaacctcgcaggttcaacggtcggcttttgtaatcttatcaagagagcaaaggaccaaatgaatgctctttgggtagctgatgctacagaaaactcggcatactttttgagttttgactctccacattgttcacatctcaaaggtgctgctgcctctgctgaaagatggggaagaatctctagcttgaccatcagtaggcttaaggagagggttctgtttatcattggtaaagggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000228 GO:0000278 GO:0000280 GO:0000281 GO:0000722 GO:0000723 GO:0000724 GO:0000725 GO:0000781 GO:0000784 GO:0000793 GO:0000794 GO:0000795 GO:0000800 GO:0000910 GO:0001556 GO:0001701 GO:0001824 GO:0001832 GO:0001833 GO:0002020 GO:0002376 GO:0002520 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003697 GO:0003824 GO:0004402 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005739 GO:0005813 GO:0005815 GO:0005829 GO:0005856 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006281 GO:0006289 GO:0006302 GO:0006310 GO:0006312 GO:0006325 GO:0006355 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006974 GO:0006978 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007059 GO:0007098 GO:0007127 GO:0007140 GO:0007141 GO:0007154 GO:0007165 GO:0007275 GO:0007276 GO:0007281 GO:0007283 GO:0007292 GO:0007346 GO:0007399 GO:0007417 GO:0007420 GO:0007548 GO:0007568 GO:0007569 GO:0008022 GO:0008080 GO:0008092 GO:0008104 GO:0008150 GO:0008152 GO:0008156 GO:0008219 GO:0008283 GO:0008285 GO:0008406 GO:0008585 GO:0008608 GO:0008630 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009790 GO:0009792 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009987 GO:0009994 GO:0010165 GO:0010212 GO:0010225 GO:0010332 GO:0010468 GO:0010484 GO:0010485 GO:0010556 GO:0010557 GO:0010558 GO:0010564 GO:0010604 GO:0010605 GO:0010628 GO:0012501 GO:0012505 GO:0015630 GO:0015631 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019538 GO:0019899 GO:0019953 GO:0021700 GO:0022402 GO:0022412 GO:0022414 GO:0023052 GO:0030097 GO:0030141 GO:0030154 GO:0030330 GO:0030879 GO:0031023 GO:0031297 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031410 GO:0031619 GO:0031974 GO:0031981 GO:0031982 GO:0032200 GO:0032465 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033036 GO:0033260 GO:0033365 GO:0033554 GO:0033593 GO:0033599 GO:0033600 GO:0034212 GO:0034502 GO:0034613 GO:0034641 GO:0034645 GO:0035264 GO:0035556 GO:0036211 GO:0040007 GO:0042127 GO:0042592 GO:0042770 GO:0042771 GO:0042772 GO:0042802 GO:0043009 GO:0043015 GO:0043060 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0043967 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044454 GO:0044464 GO:0044703 GO:0044786 GO:0045005 GO:0045132 GO:0045137 GO:0045143 GO:0045184 GO:0045787 GO:0045893 GO:0045931 GO:0045934 GO:0045935 GO:0046483 GO:0046545 GO:0046660 GO:0048232 GO:0048285 GO:0048468 GO:0048469 GO:0048477 GO:0048478 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048534 GO:0048589 GO:0048599 GO:0048608 GO:0048609 GO:0048731 GO:0048732 GO:0048856 GO:0048869 GO:0050000 GO:0050678 GO:0050680 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051093 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0051252 GO:0051254 GO:0051276 GO:0051298 GO:0051301 GO:0051302 GO:0051303 GO:0051310 GO:0051311 GO:0051316 GO:0051321 GO:0051455 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051704 GO:0051716 GO:0051726 GO:0060249 GO:0060255 GO:0060322 GO:0061458 GO:0061640 GO:0061733 GO:0061982 GO:0065007 GO:0065008 GO:0070013 GO:0070198 GO:0070199 GO:0070200 GO:0070727 GO:0071695 GO:0071704 GO:0071840 GO:0072331 GO:0072332 GO:0072594 GO:0080090 GO:0090304 GO:0090329 GO:0097159 GO:0097190 GO:0097193 GO:0097708 GO:0098687 GO:0098813 GO:0099086 GO:0099503 GO:0140013 GO:1901360 GO:1901363 GO:1901564 GO:1901576 GO:1902298 GO:1902680 GO:1902969 GO:1903046 GO:1903047 GO:1903506 GO:1903508 GO:1990426 GO:1990505 GO:2000026 GO:2000104 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03440 ko03460 ko05200 ko05212 ko05224 map03440 map03460 map05200 map05212 map05224
Pfam Domains
Protein Families
BRCA-2_OB1 BRCA-2_helical BRCA2

Protein Analysis

1133

Amino Acids

123.2

Weight (kDa)

9.09

Isoelectric Point (pI)

41.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1549
AbsI CCTCGAGG 1 cut(s) 2189
Acc36I ACCTGC 2 cut(s) 2948, 3164
AccB1I GGYRCC 1 cut(s) 1334
AccB7I CCANNNNNTGG 2 cut(s) 1711, 1752
AccBSI CCGCTC 1 cut(s) 1905
AccI GTMKAC 1 cut(s) 1478
AccIII TCCGGA 2 cut(s) 1721, 2012
AciI CCGC 5 cut(s) 59, 1084, 1903, 2163, 3128
AclWI GGATC 5 cut(s) 18, 776, 966, 2916, 2929
AcsI RAATTY 6 cut(s) 496, 1031, 1390, 1832, 2617, 2887
AcuI CTGAAG 2 cut(s) 384, 1192
AcyI GRCGYC 1 cut(s) 62
AdeI CACNNNGTG 1 cut(s) 563
AfaI GTAC 6 cut(s) 376, 385, 676, 1111, 1225, 2605
AfiI CCNNNNNNNGG 8 cut(s) 922, 923, 940, 1711, 1752, 1999, 2795, 3360
AflII CTTAAG 1 cut(s) 3365
AflIII ACRYGT 3 cut(s) 1653, 1707, 2516
AhdI GACNNNNNGTC 1 cut(s) 1606
AjnI CCWGG 2 cut(s) 703, 1536
AjuI GAANNNNNNNTTGG 4 cut(s) 938, 970, 2825, 2857
Alw21I GWGCWC 3 cut(s) 739, 2245, 2287
Alw26I GTCTC 4 cut(s) 770, 1997, 2417, 2558
Alw44I GTGCAC 1 cut(s) 735
AlwI GGATC 5 cut(s) 18, 776, 966, 2916, 2929
AlwNI CAGNNNCTG 2 cut(s) 461, 2573
Ama87I CYCGRG 1 cut(s) 2189
Aor13HI TCCGGA 2 cut(s) 1721, 2012
AoxI GGCC 3 cut(s) 85, 192, 2174
ApaLI GTGCAC 1 cut(s) 735
ApeKI GCWGC 6 cut(s) 1170, 2101, 2570, 2987, 3311, 3314
ApoI RAATTY 6 cut(s) 496, 1031, 1390, 1832, 2617, 2887
ArsI GACNNNNNNTTYG 4 cut(s) 171, 203, 2121, 2153
AseI ATTAAT 3 cut(s) 1278, 1638, 2732
Asp700I GAANNNNTTC 1 cut(s) 1516
AspLEI GCGC 1 cut(s) 2457
AspS9I GGNCC 3 cut(s) 2174, 2321, 3217
AsuC2I CCSGG 4 cut(s) 243, 259, 414, 561
AsuNHI GCTAGC 1 cut(s) 2911
AvaI CYCGRG 1 cut(s) 2189
AvaII GGWCC 2 cut(s) 2321, 3217
BaeGI GKGCMC 2 cut(s) 739, 1124
BamHI GGATCC 1 cut(s) 2921
BanI GGYRCC 1 cut(s) 1334
BanII GRGCYC 1 cut(s) 2245
BarI GAAGNNNNNNTAC 2 cut(s) 1504, 1536
BbsI GAAGAC 3 cut(s) 282, 896, 2787
Bbv12I GWGCWC 3 cut(s) 739, 2245, 2287
BbvI GCAGC 6 cut(s) 1182, 2113, 2557, 2974, 3298, 3301
BceAI ACGGC 1 cut(s) 25
BcgI CGANNNNNNTGC 3 cut(s) 32, 775, 809
BciT130I CCWGG 2 cut(s) 705, 1538
BciVI GTATCC 1 cut(s) 2550
BclI TGATCA 3 cut(s) 1131, 2254, 3139
BcnI CCSGG 4 cut(s) 243, 259, 414, 561
BcoDI GTCTC 4 cut(s) 770, 1997, 2417, 2558
BfmI CTRYAG 4 cut(s) 1168, 1233, 2968, 3249
BfoI RGCGCY 1 cut(s) 2458
BfrI CTTAAG 1 cut(s) 3365
BfuAI ACCTGC 2 cut(s) 2948, 3164
BfuI GTATCC 1 cut(s) 2550
BglI GCCNNNNNGGC 1 cut(s) 59
BglII AGATCT 3 cut(s) 422, 860, 2396
BisI GCNGC 8 cut(s) 60, 1171, 2102, 2164, 2571, 2988, 3312, 3315
BlsI GCNGC 8 cut(s) 61, 1172, 2103, 2165, 2572, 2989, 3313, 3316
Bme1390I CCNGG 6 cut(s) 243, 259, 414, 561, 705, 1538
Bme18I GGWCC 2 cut(s) 2321, 3217
BmeRI GACNNNNNGTC 1 cut(s) 1606
BmeT110I CYCGRG 1 cut(s) 2189
BmgT120I GGNCC 3 cut(s) 2174, 2321, 3217
BmiI GGNNCC 6 cut(s) 1336, 1726, 2322, 2816, 2923, 3064
BmrFI CCNGG 6 cut(s) 243, 259, 414, 561, 705, 1538
BmrI ACTGGG 1 cut(s) 333
BmtI GCTAGC 1 cut(s) 2915
BmuI ACTGGG 1 cut(s) 333
BpiI GAAGAC 3 cut(s) 282, 896, 2787
BplI GAGNNNNNCTC 8 cut(s) 932, 964, 1994, 2026, 2142, 2174, 2532, 2564
BpmI CTGGAG 2 cut(s) 726, 873
BpuEI CTTGAG 1 cut(s) 2572
BpuMI CCSGG 4 cut(s) 243, 259, 414, 561
Bsa29I ATCGAT 1 cut(s) 3135
BsaAI YACGTR 1 cut(s) 1684
BsaBI GATNNNNATC 1 cut(s) 865
BsaHI GRCGYC 1 cut(s) 62
BsaI GGTCTC 1 cut(s) 2417
BsaJI CCNNGG 3 cut(s) 258, 1593, 2330
BsaWI WCCGGW 2 cut(s) 1721, 2012
Bsc4I CCNNNNNNNGG 8 cut(s) 922, 923, 940, 1711, 1752, 1999, 2795, 3360
Bse3DI GCAATG 3 cut(s) 16, 1162, 1439
Bse8I GATNNNNATC 1 cut(s) 865
BseAI TCCGGA 2 cut(s) 1721, 2012
BseBI CCWGG 2 cut(s) 705, 1538
BseCI ATCGAT 1 cut(s) 3135
BseDI CCNNGG 3 cut(s) 258, 1593, 2330
BseGI GGATG 5 cut(s) 274, 1067, 2077, 2089, 2257
BseJI GATNNNNATC 1 cut(s) 865
BseLI CCNNNNNNNGG 8 cut(s) 922, 923, 940, 1711, 1752, 1999, 2795, 3360
BseMI GCAATG 3 cut(s) 16, 1162, 1439
BseMII CTCAG 6 cut(s) 648, 963, 1337, 2475, 2703, 2829
BseRI GAGGAG 2 cut(s) 1332, 1390
BseSI GKGCMC 2 cut(s) 739, 1124
BseXI GCAGC 6 cut(s) 1182, 2113, 2557, 2974, 3298, 3301
BseYI CCCAGC 1 cut(s) 2166
BsgI GTGCAG 1 cut(s) 485
Bsh1285I CGRYCG 1 cut(s) 3186
BshFI GGCC 3 cut(s) 87, 194, 2176
BshNI GGYRCC 1 cut(s) 1334
BshVI ATCGAT 1 cut(s) 3135
BsiEI CGRYCG 1 cut(s) 3186
BsiHKAI GWGCWC 3 cut(s) 739, 2245, 2287
BsiHKCI CYCGRG 1 cut(s) 2189
BsiSI CCGG 6 cut(s) 243, 258, 414, 561, 1722, 2013
BslFI GGGAC 1 cut(s) 2772
BslI CCNNNNNNNGG 8 cut(s) 922, 923, 940, 1711, 1752, 1999, 2795, 3360
BsmAI GTCTC 4 cut(s) 770, 1997, 2417, 2558
BsmFI GGGAC 1 cut(s) 2772
BsmI GAATGC 3 cut(s) 1578, 2990, 3232
BsnI GGCC 3 cut(s) 87, 194, 2176
Bso31I GGTCTC 1 cut(s) 2417
BsoBI CYCGRG 1 cut(s) 2189
Bsp1286I GDGCHC 4 cut(s) 739, 1124, 2245, 2287
Bsp13I TCCGGA 2 cut(s) 1721, 2012
BspACI CCGC 5 cut(s) 59, 1084, 1903, 2163, 3128
BspANI GGCC 3 cut(s) 87, 194, 2176
BspCNI CTCAG 6 cut(s) 649, 962, 1338, 2476, 2704, 2830
BspDI ATCGAT 1 cut(s) 3135
BspEI TCCGGA 2 cut(s) 1721, 2012
BspLI GGNNCC 6 cut(s) 1336, 1726, 2322, 2816, 2923, 3064
BspMAI CTGCAG 2 cut(s) 1172, 2972
BspMI ACCTGC 2 cut(s) 2948, 3164
BspOI GCTAGC 1 cut(s) 2915
BspPI GGATC 5 cut(s) 18, 776, 966, 2916, 2929
BspT107I GGYRCC 1 cut(s) 1334
BspTI CTTAAG 1 cut(s) 3365
BspTNI GGTCTC 1 cut(s) 2417
BsrBI CCGCTC 1 cut(s) 1905
BsrDI GCAATG 3 cut(s) 16, 1162, 1439
BssECI CCNNGG 3 cut(s) 258, 1593, 2330
BssNI GRCGYC 1 cut(s) 62
BssT1I CCWWGG 1 cut(s) 2330
Bst2UI CCWGG 2 cut(s) 705, 1538
Bst4CI ACNGT 7 cut(s) 233, 1237, 1594, 2276, 2786, 2866, 3184
Bst6I CTCTTC 3 cut(s) 1009, 1037, 1618
BstACI GRCGYC 1 cut(s) 62
BstAFI CTTAAG 1 cut(s) 3365
BstAPI GCANNNNNTGC 1 cut(s) 1640
BstBAI YACGTR 1 cut(s) 1684
BstC8I GCNNGC 6 cut(s) 360, 1168, 2106, 2856, 2913, 2955
BstDEI CTNAG 7 cut(s) 657, 949, 1023, 1346, 2484, 2712, 2838
BstDSI CCRYGG 1 cut(s) 1593
BstEII GGTNACC 4 cut(s) 911, 1540, 1898, 3026
BstENI CCTNNNNNAGG 1 cut(s) 938
BstF5I GGATG 5 cut(s) 274, 1067, 2077, 2089, 2257
BstH2I RGCGCY 1 cut(s) 2458
BstHHI GCGC 1 cut(s) 2457
BstMAI GTCTC 4 cut(s) 770, 1997, 2417, 2558
BstMCI CGRYCG 1 cut(s) 3186
BstNI CCWGG 2 cut(s) 705, 1538
BstNSI RCATGY 4 cut(s) 1609, 1657, 1711, 2520
BstPI GGTNACC 4 cut(s) 911, 1540, 1898, 3026
BstSCI CCNGG 6 cut(s) 241, 257, 412, 559, 703, 1536
BstSFI CTRYAG 4 cut(s) 1168, 1233, 2968, 3249
BstSLI GKGCMC 2 cut(s) 739, 1124
BstSNI TACGTA 1 cut(s) 1684
BstV1I GCAGC 6 cut(s) 1182, 2113, 2557, 2974, 3298, 3301
BstV2I GAAGAC 3 cut(s) 282, 896, 2787
BstX2I RGATCY 6 cut(s) 23, 422, 860, 958, 2396, 2921
BstXI CCANNNNNNTGG 4 cut(s) 851, 1309, 1502, 2331
BstYI RGATCY 6 cut(s) 23, 422, 860, 958, 2396, 2921
Bsu15I ATCGAT 1 cut(s) 3135
BsuI GTATCC 1 cut(s) 2550
BsuRI GGCC 3 cut(s) 87, 194, 2176
BsuTUI ATCGAT 1 cut(s) 3135
BtgI CCRYGG 1 cut(s) 1593
BtgZI GCGATG 1 cut(s) 2328
BtsCI GGATG 5 cut(s) 274, 1067, 2077, 2089, 2257
BtsI GCAGTG 5 cut(s) 259, 996, 1058, 1841, 2977
BveI ACCTGC 2 cut(s) 2948, 3164
Cac8I GCNNGC 6 cut(s) 360, 1168, 2106, 2856, 2913, 2955
CaiI CAGNNNCTG 2 cut(s) 461, 2573
CfoI GCGC 1 cut(s) 2457
Cfr13I GGNCC 3 cut(s) 2174, 2321, 3217
ClaI ATCGAT 1 cut(s) 3135
CseI GACGC 1 cut(s) 51
Csp6I GTAC 6 cut(s) 375, 384, 675, 1110, 1224, 2604
CspCI CAANNNNNGTGG 2 cut(s) 2023, 2058
CviAII CATG 8 cut(s) 986, 1458, 1606, 1654, 1708, 1895, 2517, 2668
CviQI GTAC 6 cut(s) 375, 384, 675, 1110, 1224, 2604
DdeI CTNAG 7 cut(s) 657, 949, 1023, 1346, 2484, 2712, 2838
DraIII CACNNNGTG 1 cut(s) 563
DrdI GACNNNNNNGTC 1 cut(s) 1549
DriI GACNNNNNGTC 1 cut(s) 1606
DseDI GACNNNNNNGTC 1 cut(s) 1549
Eam1104I CTCTTC 3 cut(s) 1009, 1037, 1618
Eam1105I GACNNNNNGTC 1 cut(s) 1606
EarI CTCTTC 3 cut(s) 1009, 1037, 1618
Ecl136II GAGCTC 1 cut(s) 2243
Eco105I TACGTA 1 cut(s) 1684
Eco130I CCWWGG 1 cut(s) 2330
Eco24I GRGCYC 1 cut(s) 2245
Eco31I GGTCTC 1 cut(s) 2417
Eco32I GATATC 1 cut(s) 1529
Eco47I GGWCC 2 cut(s) 2321, 3217
Eco53kI GAGCTC 1 cut(s) 2243
Eco57I CTGAAG 2 cut(s) 384, 1192
Eco88I CYCGRG 1 cut(s) 2189
Eco91I GGTNACC 4 cut(s) 911, 1540, 1898, 3026
EcoICRI GAGCTC 1 cut(s) 2243
EcoNI CCTNNNNNAGG 1 cut(s) 938
EcoO65I GGTNACC 4 cut(s) 911, 1540, 1898, 3026
EcoRI GAATTC 1 cut(s) 2617
EcoRII CCWGG 2 cut(s) 703, 1536
EcoRV GATATC 1 cut(s) 1529
EcoT14I CCWWGG 1 cut(s) 2330
EcoT22I ATGCAT 3 cut(s) 448, 1939, 1967
EcoT38I GRGCYC 1 cut(s) 2245
ErhI CCWWGG 1 cut(s) 2330
FaeI CATG 8 cut(s) 989, 1461, 1609, 1657, 1711, 1898, 2520, 2671
FalI AAGNNNNNCTT 2 cut(s) 2031, 2063
FaqI GGGAC 1 cut(s) 2772
FatI CATG 8 cut(s) 985, 1457, 1605, 1653, 1707, 1894, 2516, 2667
FbaI TGATCA 3 cut(s) 1131, 2254, 3139
FblI GTMKAC 1 cut(s) 1478
Fnu4HI GCNGC 8 cut(s) 60, 1171, 2102, 2164, 2571, 2988, 3312, 3315
FokI GGATG 5 cut(s) 281, 1054, 2084, 2096, 2264
FriOI GRGCYC 1 cut(s) 2245
Fsp4HI GCNGC 8 cut(s) 60, 1171, 2102, 2164, 2571, 2988, 3312, 3315
GlaI GCGC 1 cut(s) 2456
GluI GCNGC 8 cut(s) 60, 1171, 2102, 2164, 2571, 2988, 3312, 3315
GsaI CCCAGC 1 cut(s) 2170
GsuI CTGGAG 2 cut(s) 726, 873
HaeII RGCGCY 1 cut(s) 2458
HaeIII GGCC 3 cut(s) 87, 194, 2176
HapII CCGG 6 cut(s) 243, 258, 414, 561, 1722, 2013
HgaI GACGC 1 cut(s) 51
HhaI GCGC 1 cut(s) 2457
Hin1I GRCGYC 1 cut(s) 62
Hin1II CATG 8 cut(s) 989, 1461, 1609, 1657, 1711, 1898, 2520, 2671
Hin6I GCGC 1 cut(s) 2455
HinP1I GCGC 1 cut(s) 2455
HindIII AAGCTT 2 cut(s) 1695, 1821
HpaII CCGG 6 cut(s) 243, 258, 414, 561, 1722, 2013
Hpy166II GTNNAC 7 cut(s) 386, 737, 1479, 1600, 1705, 3125, 3296
Hpy8I GTNNAC 7 cut(s) 386, 737, 1479, 1600, 1705, 3125, 3296
Hpy99I CGWCG 3 cut(s) 46, 49, 67
HpyAV CCTTC 8 cut(s) 399, 690, 1216, 1922, 1953, 2531, 2768, 2789
HpyCH4III ACNGT 7 cut(s) 233, 1237, 1594, 2276, 2786, 2866, 3184
HpyCH4IV ACGT 2 cut(s) 892, 1683
HpyF3I CTNAG 7 cut(s) 657, 949, 1023, 1346, 2484, 2712, 2838
HpySE526I ACGT 2 cut(s) 892, 1683
Hsp92I GRCGYC 1 cut(s) 62
Hsp92II CATG 8 cut(s) 989, 1461, 1609, 1657, 1711, 1898, 2520, 2671
HspAI GCGC 1 cut(s) 2455
Kpn2I TCCGGA 2 cut(s) 1721, 2012
Ksp22I TGATCA 3 cut(s) 1131, 2254, 3139
LmnI GCTCC 8 cut(s) 823, 1724, 2015, 2015, 2150, 2290, 2540, 3068
Lsp1109I GCAGC 6 cut(s) 1182, 2113, 2557, 2974, 3298, 3301
MaeII ACGT 2 cut(s) 892, 1683
MbiI CCGCTC 1 cut(s) 1905
MfeI CAATTG 2 cut(s) 2258, 2612
MflI RGATCY 6 cut(s) 23, 422, 860, 958, 2396, 2921
MhlI GDGCHC 4 cut(s) 739, 1124, 2245, 2287
MlyI GAGTC 8 cut(s) 494, 641, 910, 1387, 2151, 2329, 2355, 3275
MmeI TCCRAC 5 cut(s) 1449, 2107, 2391, 2400, 2731
Mph1103I ATGCAT 3 cut(s) 448, 1939, 1967
MroI TCCGGA 2 cut(s) 1721, 2012
MroXI GAANNNNTTC 1 cut(s) 1516
MslI CAYNNNNRTG 6 cut(s) 1449, 1500, 2226, 2250, 2299, 3135
MspA1I CMGCKG 2 cut(s) 851, 2570
MspCI CTTAAG 1 cut(s) 3365
MspI CCGG 6 cut(s) 243, 258, 414, 561, 1722, 2013
MspR9I CCNGG 6 cut(s) 243, 259, 414, 561, 705, 1538
MunI CAATTG 2 cut(s) 2258, 2612
Mva1269I GAATGC 3 cut(s) 1578, 2990, 3232
MvaI CCWGG 2 cut(s) 705, 1538
NciI CCSGG 4 cut(s) 243, 259, 414, 561
NheI GCTAGC 1 cut(s) 2911
NlaIII CATG 8 cut(s) 989, 1461, 1609, 1657, 1711, 1898, 2520, 2671
NlaIV GGNNCC 6 cut(s) 1336, 1726, 2322, 2816, 2923, 3064
NmeAIII GCCGAG 1 cut(s) 3239
NmuCI GTSAC 9 cut(s) 227, 911, 992, 1293, 1540, 1898, 2347, 3026, 3052
NsiI ATGCAT 3 cut(s) 448, 1939, 1967
NspI RCATGY 4 cut(s) 1609, 1657, 1711, 2520
PaeR7I CTCGAG 1 cut(s) 2189
PciI ACATGT 3 cut(s) 1653, 1707, 2516
PcsI WCGNNNNNNNCGW 1 cut(s) 24
PctI GAATGC 3 cut(s) 1578, 2990, 3232
PdmI GAANNNNTTC 1 cut(s) 1516
PfeI GAWTC 9 cut(s) 15, 80, 131, 298, 1667, 1891, 3074, 3098, 3339
PflMI CCANNNNNTGG 2 cut(s) 1711, 1752
PkrI GCNGC 8 cut(s) 61, 1172, 2103, 2165, 2572, 2989, 3313, 3316
PleI GAGTC 8 cut(s) 493, 640, 909, 1386, 2151, 2329, 2354, 3275
PpsI GAGTC 8 cut(s) 493, 640, 909, 1386, 2151, 2329, 2354, 3275
Ppu21I YACGTR 1 cut(s) 1684
PscI ACATGT 3 cut(s) 1653, 1707, 2516
PshBI ATTAAT 3 cut(s) 1278, 1638, 2732
Psp124BI GAGCTC 1 cut(s) 2245
Psp6I CCWGG 2 cut(s) 703, 1536
PspEI GGTNACC 4 cut(s) 911, 1540, 1898, 3026
PspFI CCCAGC 1 cut(s) 2166
PspGI CCWGG 2 cut(s) 703, 1536
PspN4I GGNNCC 6 cut(s) 1336, 1726, 2322, 2816, 2923, 3064
PspPI GGNCC 3 cut(s) 2174, 2321, 3217
PspXI VCTCGAGB 1 cut(s) 2189
PstI CTGCAG 2 cut(s) 1172, 2972
PstNI CAGNNNCTG 2 cut(s) 461, 2573
PsuI RGATCY 6 cut(s) 23, 422, 860, 958, 2396, 2921
PvuII CAGCTG 2 cut(s) 851, 2570
RsaI GTAC 6 cut(s) 376, 385, 676, 1111, 1225, 2605
RsaNI GTAC 6 cut(s) 375, 384, 675, 1110, 1224, 2604
RseI CAYNNNNRTG 6 cut(s) 1449, 1500, 2226, 2250, 2299, 3135
SacI GAGCTC 1 cut(s) 2245
SatI GCNGC 8 cut(s) 60, 1171, 2102, 2164, 2571, 2988, 3312, 3315
Sau96I GGNCC 3 cut(s) 2174, 2321, 3217
SchI GAGTC 8 cut(s) 494, 641, 910, 1387, 2151, 2329, 2355, 3275
ScrFI CCNGG 6 cut(s) 243, 259, 414, 561, 705, 1538
SduI GDGCHC 4 cut(s) 739, 1124, 2245, 2287
SfcI CTRYAG 4 cut(s) 1168, 1233, 2968, 3249
Sfr274I CTCGAG 1 cut(s) 2189
SinI GGWCC 2 cut(s) 2321, 3217
SlaI CTCGAG 1 cut(s) 2189
SmiMI CAYNNNNRTG 6 cut(s) 1449, 1500, 2226, 2250, 2299, 3135
SmlI CTYRAG 3 cut(s) 2189, 2551, 3365
SmoI CTYRAG 3 cut(s) 2189, 2551, 3365
SnaBI TACGTA 1 cut(s) 1684
SsiI CCGC 5 cut(s) 59, 1084, 1903, 2163, 3128
SspI AATATT 1 cut(s) 1565
SstI GAGCTC 1 cut(s) 2245
StyD4I CCNGG 6 cut(s) 241, 257, 412, 559, 703, 1536
StyI CCWWGG 1 cut(s) 2330
TaaI ACNGT 7 cut(s) 233, 1237, 1594, 2276, 2786, 2866, 3184
TaiI ACGT 2 cut(s) 895, 1686
TaqI TCGA 6 cut(s) 1525, 1949, 2190, 2635, 2847, 3135
TatI WGTACW 3 cut(s) 374, 1109, 2603
TauI GCSGC 2 cut(s) 62, 2166
TfiI GAWTC 9 cut(s) 15, 80, 131, 298, 1667, 1891, 3074, 3098, 3339
TseFI GTSAC 9 cut(s) 227, 911, 992, 1293, 1540, 1898, 2347, 3026, 3052
TseI GCWGC 6 cut(s) 1170, 2101, 2570, 2987, 3311, 3314
Tsp45I GTSAC 9 cut(s) 227, 911, 992, 1293, 1540, 1898, 2347, 3026, 3052
TspGWI ACGGA 4 cut(s) 16, 22, 1476, 2277
Van91I CCANNNNNTGG 2 cut(s) 1711, 1752
Vha464I CTTAAG 1 cut(s) 3365
VneI GTGCAC 1 cut(s) 735
VpaK11BI GGWCC 2 cut(s) 2321, 3217
VspI ATTAAT 3 cut(s) 1278, 1638, 2732
XagI CCTNNNNNAGG 1 cut(s) 938
XapI RAATTY 6 cut(s) 496, 1031, 1390, 1832, 2617, 2887
XceI RCATGY 4 cut(s) 1609, 1657, 1711, 2520
XcmI CCANNNNNNNNNTGG 2 cut(s) 149, 1309
XhoI CTCGAG 1 cut(s) 2189
XmiI GTMKAC 1 cut(s) 1478
XmnI GAANNNNTTC 1 cut(s) 1516
Zsp2I ATGCAT 3 cut(s) 448, 1939, 1967
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.