AT4G00651

oxidoreductase activity, acting on superoxide radicals as acceptor

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
271487 .. 271879
393 bp
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UTR
Exon/CDS
Intron
AT4G00651.1

Sequence Viewer

Length: 288 bp
ATGGAATCAATGCTTCTATTCATGTTTAAAATCCAGTTTAAAGCCTGCAACTCAAGTTGGATCTTCGGTGAATTCATCTTCCTCAAGAAAGATAAGAAGGCGGACATAAATACATTCATGGAAAAGCTTGTGTCATGGGAAACTGTAAGCACAAGGTTGGAATCCGCAATTGCTCGAGCAGTGCAACGAGAACAAGAAGGAACAGAGACAGAAGATGAAGAGAATCCAGATGACCAAGAGCCAGAGGTCTATTTAGATAGTGATATCGATGTATCTGAGGTTGACTAA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

95

Amino Acids

11.09

Weight (kDa)

4.23

Isoelectric Point (pI)

30.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 101, 165
AclWI GGATC 1 cut(s) 68
AcsI RAATTY 1 cut(s) 71
AluBI AGCT 1 cut(s) 127
AluI AGCT 1 cut(s) 127
Alw26I GTCTC 1 cut(s) 200
AlwI GGATC 1 cut(s) 68
Ama87I CYCGRG 1 cut(s) 174
ApoI RAATTY 1 cut(s) 71
AsuHPI GGTGA 1 cut(s) 80
AvaI CYCGRG 1 cut(s) 174
BcoDI GTCTC 1 cut(s) 200
BmeT110I CYCGRG 1 cut(s) 174
BpuEI CTTGAG 2 cut(s) 37, 68
Bsa29I ATCGAT 1 cut(s) 267
Bse1I ACTGG 1 cut(s) 34
BseCI ATCGAT 1 cut(s) 267
BseMII CTCAG 1 cut(s) 267
BseNI ACTGG 1 cut(s) 34
BshVI ATCGAT 1 cut(s) 267
BsiHKCI CYCGRG 1 cut(s) 174
BsmAI GTCTC 1 cut(s) 200
BsoBI CYCGRG 1 cut(s) 174
Bsp143I GATC 1 cut(s) 60
BspACI CCGC 2 cut(s) 101, 165
BspCNI CTCAG 1 cut(s) 268
BspDI ATCGAT 1 cut(s) 267
BspPI GGATC 1 cut(s) 68
BsrI ACTGG 1 cut(s) 34
BssMI GATC 1 cut(s) 60
Bst4CI ACNGT 1 cut(s) 145
Bst6I CTCTTC 1 cut(s) 213
BstC8I GCNNGC 1 cut(s) 46
BstDEI CTNAG 1 cut(s) 276
BstKTI GATC 1 cut(s) 63
BstMAI GTCTC 1 cut(s) 200
BstMBI GATC 1 cut(s) 60
BstX2I RGATCY 1 cut(s) 60
BstYI RGATCY 1 cut(s) 60
Bsu15I ATCGAT 1 cut(s) 267
BsuTUI ATCGAT 1 cut(s) 267
BtsI GCAGTG 1 cut(s) 186
BtsIMutI CAGTG 1 cut(s) 186
Cac8I GCNNGC 1 cut(s) 46
ClaI ATCGAT 1 cut(s) 267
CviAII CATG 3 cut(s) 22, 118, 135
CviJI RGCY 3 cut(s) 44, 127, 241
CviKI_1 RGCY 3 cut(s) 44, 127, 241
DdeI CTNAG 1 cut(s) 276
DpnI GATC 1 cut(s) 62
DpnII GATC 1 cut(s) 60
DraI TTTAAA 2 cut(s) 28, 40
Eam1104I CTCTTC 1 cut(s) 213
EarI CTCTTC 1 cut(s) 213
EciI GGCGGA 1 cut(s) 116
Eco32I GATATC 1 cut(s) 265
Eco88I CYCGRG 1 cut(s) 174
EcoRI GAATTC 1 cut(s) 71
EcoRV GATATC 1 cut(s) 265
FaeI CATG 3 cut(s) 25, 121, 138
FaiI YATR 4 cut(s) 23, 107, 119, 136
FatI CATG 3 cut(s) 21, 117, 134
Hin1II CATG 3 cut(s) 25, 121, 138
HincII GTYRAC 1 cut(s) 283
HindII GTYRAC 1 cut(s) 283
HindIII AAGCTT 1 cut(s) 125
HinfI GANTC 3 cut(s) 5, 161, 223
HphI GGTGA 1 cut(s) 80
Hpy166II GTNNAC 1 cut(s) 283
Hpy188I TCNGA 1 cut(s) 277
Hpy188III TCNNGA 2 cut(s) 85, 227
Hpy8I GTNNAC 1 cut(s) 283
HpyAV CCTTC 2 cut(s) 91, 191
HpyCH4III ACNGT 1 cut(s) 145
HpyCH4V TGCA 2 cut(s) 48, 184
HpyF3I CTNAG 1 cut(s) 276
Hsp92II CATG 3 cut(s) 25, 121, 138
Kzo9I GATC 1 cut(s) 60
LpnPI CCDG 4 cut(s) 47, 58, 240, 255
MalI GATC 1 cut(s) 62
MboI GATC 1 cut(s) 60
MboII GAAGA 4 cut(s) 55, 70, 224, 230
MfeI CAATTG 1 cut(s) 168
MflI RGATCY 1 cut(s) 60
MluCI AATT 2 cut(s) 71, 168
MmeI TCCRAC 2 cut(s) 38, 138
MnlI CCTC 3 cut(s) 92, 238, 271
MseI TTAA 2 cut(s) 27, 39
MunI CAATTG 1 cut(s) 168
NdeII GATC 1 cut(s) 60
NlaIII CATG 3 cut(s) 25, 121, 138
PaeR7I CTCGAG 1 cut(s) 174
PfeI GAWTC 3 cut(s) 5, 161, 223
PspXI VCTCGAGB 1 cut(s) 174
PsuI RGATCY 1 cut(s) 60
SaqAI TTAA 2 cut(s) 27, 39
Sau3AI GATC 1 cut(s) 60
SetI ASST 4 cut(s) 129, 158, 249, 282
Sfr274I CTCGAG 1 cut(s) 174
SlaI CTCGAG 1 cut(s) 174
SmlI CTYRAG 3 cut(s) 52, 83, 174
SmoI CTYRAG 3 cut(s) 52, 83, 174
Sse9I AATT 2 cut(s) 71, 168
SsiI CCGC 2 cut(s) 101, 165
TaaI ACNGT 1 cut(s) 145
TaqI TCGA 2 cut(s) 175, 267
TasI AATT 2 cut(s) 71, 168
TfiI GAWTC 3 cut(s) 5, 161, 223
Tru1I TTAA 2 cut(s) 27, 39
Tru9I TTAA 2 cut(s) 27, 39
TscAI CASTG 1 cut(s) 186
TspDTI ATGAA 4 cut(s) 10, 64, 106, 231
TspRI CASTG 1 cut(s) 186
XapI RAATTY 1 cut(s) 71
XhoI CTCGAG 1 cut(s) 174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.