Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006487

Physical Location & Seq

Genomic Coordinates Reverse (-)

1081671 .. 1088846

Gene Structure 7176 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G02480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3798 bp

ATGGTTGAGACGAGACGTAGCTCTTCCGCTTCCAAGCGTTTCTGTGCTTCTTCTTCTTCCCCTGAAGCATCTTCTTCTCAAAGGCCTAACAAGCGATCTAAGGTTAAGATCGATGCCGCTGCTTCTTCTCTCGAACCTGCGACGGCGGAACCGGCTGGTTCTTCATCAGCGAGCGAAGTTCCGATCGAGAATCAAGGACCTGCTTCGGATCCTGGATCGGAATCTGGAGAGCCGGAACTTGGATCTTCTGATCCACAGGCTATGGATGCGGAGAAGCCTGTTGTTACAACTGATGTCCCTGTGATGGAGAACTCTCCTGAAACCGACGCTAACCCTGAAGTCGAAGTCTTGGCCACACCTACCGTAGCAGGTGAAGCGGTGGCGGATGCTGACAAATCTAAGGCGGCTAAGAAGCGAGCTTTAAAGGCTCCATGGGCGAAGCTACTTTCCCAGTATTCTCAGAATCCTCACCGTGTCATCAGAGGCCCTGTGTTTACTGTTGGACGCCGGGGATGTGATTTATCTATCAGAGACCAAGCTATGCCCAGCACCCTCTGTGAACTGAAGCAGTCTGAGCACGGTGGTCCATCAGTTGCATCCCTTGAGATATTAGGAAATGGAGTTATTGTTCATGTCAATGGCAAGTGTTACCAGAAAAGTACTTGTGTTCATCTACGGGGTGGTGACGAGGTGATCTTCAGCCTTAATGGGAAACATGCTTATATATTTCAACCTGTTAAAGATGAAAATTTAGCAGCTCCTGACAGAGCTTCTTCGTTGAGTATATGTGAAGCTCGGGGTGCCCCTCTGAAAGGGGTTCATGTCGAGACAAGGGCAGGAGATGTTGATGGGGCCTCAGATGTTGATGGGGCCTCTATATTGGCATCTCTATCAAAGCTCCGCAGCTTCCATCTTCTACCACCAATTGCTAAAGCTGGCAAGAGGCAGCAAAATCCTGCGGTTCCTGTGGTACCTTCCAGTTTCAATGATTGCATCTCGGATACAGACATGAACGATGCTGATAGTAATAATGACCATGCTGCTGTTGCTTCTGTGGAAAAAATTGCTGCTGCTTCTACCCCTGGTACTGCCAATGAGAACCTGAATGTCGATGGCAGTGGATTGGACCCTTTTCAAGAAGCTGATGGTGGAAATGTCCCTGCTGCTGGTTATGAAATTAGACCAATCGTGCACCTTCTTGGTGAATCTTCTTCATTTGATATAAGGGGTAGCATCTCCAGATTACTGGATGAACGAAGGGAAGTGAAAGAATTCCTCAGAGAATTTGACCTTTCATCAACTATATCGACTAGACGCCAAGCTTTTAAGGATAGTCTGCGAGGAGGAGTACTCAATGCTCAAAACATAGATATTTCTTTTGAGAACTTCCCATATTATTTAAGTGCTACAACAAAGGGTGTTTTGATGATATCGATGTATGTTCATATGAACGGTGGAAGCAAGTATGCAAATTTTGCAACAGACTTGACTACAGCCTGTCCCCGTATCTTACTCTCTGGACCATCAGGCTCTGAGATATATCAGGAAATGTTGGCAAAAGCGCTTGCTAAACAGTTTGGGGCCAAATTGATGATTGTTGATTCTCTTTTGTTGCCTGGGGGATCACCAGCCAGGGAAGCTGAATCCTCTAAAGAAGGTTCTAGGCGTGAAAGGCTGTCTATGCTTGCTAAAAGAGCTGTTCAGGCTGCACAAGTATTGCAGCATAAGAAACCGACTTCAAGTGTTGATGCTGATATAACAGGTGGCTCAACATTAAGCTCTCAGGCTTTGCCAAAACAAGAAGTGTCAACAGCAACTTCTAAAAGTTACACATTCAAAGCAGGTGACAGAGTTAAATTTGTAGGTCCTTCGGCTTCTGCAATTTCTTCTCTTCAAGGCCAGCTTAGGGGACCGGCCATTGGTTCCCAGGGAAAAGTAGCCCTTGCATTTGAAGACAACTGTGCTTCAAAAATTGGGATTAGATTCGATAGGCCTGTACAAGATGGCAATGATCTTGGTGGCCTCTGCGAAGAAGACCATGGTTTTTTTTGTGCTGCTAGCTCACTTCGGTTAGAAGGTTCTTCTAGCGATGATGCTGATAAACTCGCCGTTAATGAAATCTTTGAGGTCGCACTTAGTGAGAGTGAAGGAGGGTCATTAATATTGTTTCTGAAAGATATTGAGAAATCTCTTGTGGGGAACAGTGATGTGTATGCAACCTTGAAAAGCAAGCTTGAGACTTTACCGGAAAATATAGTTGTCATTGCCTCGCAGACCCAGTTGGACAGCCGAAAGGAGAAATCCCATCCTGGAGGTTTCTTGTTTACTAAGTTTGGTGGCAATCAGACGGCACTACTGGATCTAGCATTTCCGGATAATTTTGGTAAACTGCACGATAGAAGCAAAGAAACACCTAAATCAATGAAACAAATAACTCGACTATTTCCTAACAAAATCGCCATCCAGTTACCTCAGGAAGAAGCTTTACTCTCGGATTGGAAGGAGAAACTTGACCGTGACACAGAGATTTTGAAGGTTCAGGCTAATATAACCAGCATCCTTGCAGTCCTCGCCAAAAACAAACTTGACTGCCCTGACCTTGGAACGTTGTGCATCAAAGATCAAACCCTTCCATCTGAAAGTGTTGAAAAAGTGGTTGGCTGGGCTTTCGGTCACCATCTTATGATATGCACTGAACCTATAGTTAAAGACAACAAGCTTGTTATCTCTGCAGAGAGCATTTCATATGGCCTGCAGACGTTGCATGATATTCAGAACGAAAACAAGAGTTTAAAGAAGTCTCTCAAGGATGTTGTTACTGAGAACGAATTTGAGAAAAAACTGTTGTCGGATGTCATTCCACCTAGCGATATAGGTGTTTCCTTTGATGATATTGGAGCTCTGGAAAATGTGAAAGAAACGTTGAAGGAGTTGGTGATGCTTCCTCTTCAGAGACCGGAATTGTTTGACAAAGGCCAGCTCACAAAGCCTACGAAAGGTATACTGTTGTTTGGACCTCCTGGTACTGGAAAGACGATGCTGGCAAAAGCAGTAGCAACTGAGGCTGGCGCAAATTTCATCAATATCTCAATGTCCAGCATTACTTCGAAGTGGTTTGGTGAGGGAGAGAAGTACGTTAAAGCTGTCTTCTCCTTAGCGAGCAAGATTGCGCCAAGTGTCATTTTTGTTGATGAGGTTGATAGCATGTTGGGTAGACGTGAAAATCCAGGGGAACATGAAGCTATGCGTAAGATGAAGAACGAGTTCATGGTAAACTGGGATGGTTTAAGAACAAAGGATAGAGAACGGGTTCTGGTACTCGCTGCCACCAACAGACCATTTGACCTAGACGAAGCTGTTATTAGACGGCTTCCCCGGAGATTGATGGTTAATCTTCCAGATGCAACGAACAGATCAAAGATCTTGAGCGTTATTCTAGCAAAAGAAGAAATAGCACCAGACGTCGATTTAGAAGCTATAGCAAATATGACAGATGGGTACTCAGGAAGTGACTTAAAGAATCTGTGTGTGACCGCAGCACATTTTCCAATCCGAGAAATACTGGAGAAAGAAAAGAAGGAGAAAACTGCAGCTCAGGCTGAGAACCGTCCCACACCGCCATTGTATAGCTGCACAGATGTTCGTTCCCTGACAATGAACGATTTCAAGGCTGCCCATGATCAGGTATGCGCAAGTGTGTCTTCAGACTCGTCGAACATGAACGAACTTCAGCAATGGAACGAGCTGTATGGTGAAGGAGGATCGAGGAAGAAGACGTCGTTGAGCTACTTCATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002090 GO:0002092 GO:0003008 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0007610 GO:0007611 GO:0007612 GO:0007613 GO:0008150 GO:0009893 GO:0010604 GO:0010646 GO:0010648 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0023051 GO:0023057 GO:0030100 GO:0031323 GO:0031325 GO:0032501 GO:0032879 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044456 GO:0044459 GO:0044464 GO:0045202 GO:0045211 GO:0045807 GO:0048259 GO:0048260 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050804 GO:0050805 GO:0050877 GO:0050890 GO:0051049 GO:0051050 GO:0051128 GO:0051130 GO:0051966 GO:0051967 GO:0060255 GO:0060627 GO:0065007 GO:0071944 GO:0097060 GO:0098590 GO:0098794 GO:0099177

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FHA

Protein Analysis

1265

Amino Acids

136.52

Weight (kDa)

5.68

Isoelectric Point (pI)

42.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7751	PF24933	862 - 921	1.5e-23	Domain of unknown function (DUF7751)
AAA	PF00004	1001 - 1131	5.3e-38	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	1154 - 1190	7.3e-14	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006487)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02890 AT1G02890 AT4G02480
fragaria_vesca	FvH4_2g25490 FvH4_2g25490 FvH4_2g25490
malus_domestica	MD03G1285800.v1.1 MD11G1305200.v1.1 MD11G1305300.v1.1 MD11G1305400.v1.1
prunus_persica	Prupe.8G259000_v2.0.a1 Prupe.8G259000_v2.0.a1 Prupe.8G259000_v2.0.a1 Prupe.8G259000_v2.0.a1
pyrus_communis	pycom03g22650 pycom11g26700 pycom11g26720
rosa_chinensis	RchiOBHm_Chr6g0293701
rosa_laevigata	RLG00000011931
rosa_roxburghii	Rroxscaffold_7G00173960
rosa_rugosa	Rorug06G0237500
rosa_samantha	Rh6AG350200 Rh6BG357700 Rh6CG364500 Rh6DG351400
rosa_wichuraiana	Rw6G030490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	359, 1832
AatII	GACGTC	2 cut(s)	3465, 3779
Acc16I	TGCGCA	1 cut(s)	3691
Acc36I	ACCTGC	4 cut(s)	145, 208, 359, 1832
Acc65I	GGTACC	1 cut(s)	970
AccB1I	GGYRCC	2 cut(s)	800, 970
AccI	GTMKAC	2 cut(s)	3001, 3214
AccIII	TCCGGA	1 cut(s)	2371
AclI	AACGTT	2 cut(s)	2606, 2921
AclWI	GGATC	8 cut(s)	203, 216, 223, 245, 250, 1630, 2367, 3769
AcoI	YGGCCR	2 cut(s)	351, 1914
AcsI	RAATTY	7 cut(s)	748, 1271, 1283, 1471, 1856, 2828, 3073
AcuI	CTGAAG	7 cut(s)	84, 357, 584, 682, 2933, 3687, 3713
AcyI	GRCGYC	4 cut(s)	505, 1315, 3462, 3776
AdeI	CACNNNGTG	1 cut(s)	2138
AfaI	GTAC	9 cut(s)	661, 972, 1087, 1350, 1998, 3025, 3134, 3318, 3500
AfeI	AGCGCT	1 cut(s)	1563
AjiI	CACGTC	1 cut(s)	3218
AjnI	CCWGG	8 cut(s)	211, 1081, 1615, 1631, 1926, 2308, 3019, 3226
AjuI	GAANNNNNNNTTGG	2 cut(s)	2640, 2672
AloI	GAACNNNNNNTCC	2 cut(s)	612, 644
Alw21I	GWGCWC	3 cut(s)	579, 1194, 2902
Alw26I	GTCTC	7 cut(s)	2, 7, 525, 821, 2231, 2805, 2947
Alw44I	GTGCAC	1 cut(s)	1190
AlwI	GGATC	8 cut(s)	203, 216, 223, 245, 250, 1630, 2367, 3769
AlwNI	CAGNNNCTG	2 cut(s)	761, 1532
Ama87I	CYCGRG	1 cut(s)	795
Aor13HI	TCCGGA	1 cut(s)	2371
Aor51HI	AGCGCT	1 cut(s)	1563
ApaLI	GTGCAC	1 cut(s)	1190
ApoI	RAATTY	7 cut(s)	748, 1271, 1283, 1471, 1856, 2828, 3073
AseI	ATTAAT	1 cut(s)	2159
Asp700I	GAANNNNTTC	4 cut(s)	1271, 3263, 3309, 3662
Asp718I	GGTACC	1 cut(s)	970
AspLEI	GCGC	4 cut(s)	1564, 3071, 3172, 3692
AsuC2I	CCSGG	2 cut(s)	509, 3376
AsuII	TTCGAA	1 cut(s)	3107
AsuNHI	GCTAGC	1 cut(s)	2057
AvaI	CYCGRG	1 cut(s)	795
AvaII	GGWCC	7 cut(s)	197, 584, 1126, 1520, 1865, 1910, 3014
AxyI	CCTNAGG	1 cut(s)	2472
BaeGI	GKGCMC	2 cut(s)	805, 1194
BalI	TGGCCA	1 cut(s)	353
BamHI	GGATCC	1 cut(s)	208
BanI	GGYRCC	2 cut(s)	800, 970
BanII	GRGCYC	1 cut(s)	2902
BarI	GAAGNNNNNNTAC	2 cut(s)	2469, 2501
BbsI	GAAGAC	5 cut(s)	1959, 2040, 3139, 3693, 3779
Bbv12I	GWGCWC	3 cut(s)	579, 1194, 2902
BceAI	ACGGC	4 cut(s)	159, 2093, 2364, 3383
BcgI	CGANNNNNNTGC	2 cut(s)	101, 135
BciT130I	CCWGG	8 cut(s)	213, 1083, 1617, 1633, 1928, 2310, 3021, 3228
BciVI	GTATCC	1 cut(s)	994
BclI	TGATCA	1 cut(s)	3679
BcnI	CCSGG	2 cut(s)	509, 3376
BcoDI	GTCTC	7 cut(s)	2, 7, 525, 821, 2231, 2805, 2947
BfaI	CTAG	8 cut(s)	1311, 1662, 2058, 2085, 2363, 2865, 3347, 3437
BfmI	CTRYAG	6 cut(s)	1491, 2700, 2730, 2753, 3477, 3588
BfoI	RGCGCY	1 cut(s)	1565
BfuAI	ACCTGC	4 cut(s)	145, 208, 359, 1832
BfuI	GTATCC	1 cut(s)	994
BglII	AGATCT	1 cut(s)	3420
BmcAI	AGTACT	2 cut(s)	661, 1350
Bme18I	GGWCC	7 cut(s)	197, 584, 1126, 1520, 1865, 1910, 3014
BmeT110I	CYCGRG	1 cut(s)	795
BmgBI	CACGTC	1 cut(s)	3218
BmrI	ACTGGG	3 cut(s)	445, 2272, 3286
BmtI	GCTAGC	1 cut(s)	2061
BmuI	ACTGGG	3 cut(s)	445, 2272, 3286
BpiI	GAAGAC	5 cut(s)	1959, 2040, 3139, 3693, 3779
BplI	GAGNNNNNCTC	2 cut(s)	1335, 1367
BpmI	CTGGAG	4 cut(s)	246, 1222, 2331, 3584
Bpu10I	CCTNAGC	3 cut(s)	1904, 3154, 3594
Bpu14I	TTCGAA	1 cut(s)	3107
BpuEI	CTTGAG	4 cut(s)	623, 2255, 2789, 3445
BpuMI	CCSGG	2 cut(s)	509, 3376
Bsa29I	ATCGAT	2 cut(s)	111, 1433
BsaBI	GATNNNNATC	1 cut(s)	220
BsaHI	GRCGYC	4 cut(s)	505, 1315, 3462, 3776
BsaI	GGTCTC	2 cut(s)	525, 2947
BsaWI	WCCGGW	3 cut(s)	2245, 2371, 2956
BsaXI	ACNNNNNCTCC	2 cut(s)	612, 642
Bse118I	RCCGGY	2 cut(s)	151, 1912
Bse1I	ACTGG	9 cut(s)	451, 978, 1251, 2278, 2361, 2464, 3031, 3281, 3567
Bse21I	CCTNAGG	1 cut(s)	2472
Bse3DI	GCAATG	3 cut(s)	2014, 2262, 3740
Bse8I	GATNNNNATC	1 cut(s)	220
BseAI	TCCGGA	1 cut(s)	2371
BseBI	CCWGG	8 cut(s)	213, 1083, 1617, 1633, 1928, 2310, 3021, 3228
BseCI	ATCGAT	2 cut(s)	111, 1433
BseJI	GATNNNNATC	1 cut(s)	220
BseMI	GCAATG	3 cut(s)	2014, 2262, 3740
BseNI	ACTGG	9 cut(s)	451, 978, 1251, 2278, 2361, 2464, 3031, 3281, 3567
BseRI	GAGGAG	2 cut(s)	1356, 1359
BseSI	GKGCMC	2 cut(s)	805, 1194
BseYI	CCCAGC	2 cut(s)	545, 2661
BsgI	GTGCAG	3 cut(s)	1692, 2375, 3616
Bsh1285I	CGRYCG	1 cut(s)	186
BshNI	GGYRCC	2 cut(s)	800, 970
BshVI	ATCGAT	2 cut(s)	111, 1433
BsiEI	CGRYCG	1 cut(s)	186
BsiHKAI	GWGCWC	3 cut(s)	579, 1194, 2902
BsiHKCI	CYCGRG	1 cut(s)	795
BsiSI	CCGG	8 cut(s)	152, 233, 508, 1913, 2246, 2372, 2957, 3376
BslFI	GGGAC	5 cut(s)	281, 1142, 1485, 1923, 3594
BsmAI	GTCTC	7 cut(s)	2, 7, 525, 821, 2231, 2805, 2947
BsmBI	CGTCTC	2 cut(s)	2, 7
BsmFI	GGGAC	5 cut(s)	281, 1142, 1485, 1923, 3594
Bso31I	GGTCTC	2 cut(s)	525, 2947
BsoBI	CYCGRG	1 cut(s)	795
Bsp119I	TTCGAA	1 cut(s)	3107
Bsp1286I	GDGCHC	4 cut(s)	579, 805, 1194, 2902
Bsp13I	TCCGGA	1 cut(s)	2371
Bsp1407I	TGTACA	1 cut(s)	1996
Bsp19I	CCATGG	2 cut(s)	431, 2038
BspDI	ATCGAT	2 cut(s)	111, 1433
BspEI	TCCGGA	1 cut(s)	2371
BspMAI	CTGCAG	3 cut(s)	2734, 2757, 3592
BspMI	ACCTGC	4 cut(s)	145, 208, 359, 1832
BspOI	GCTAGC	1 cut(s)	2061
BspPI	GGATC	8 cut(s)	203, 216, 223, 245, 250, 1630, 2367, 3769
BspQI	GCTCTTC	1 cut(s)	28
BspT104I	TTCGAA	1 cut(s)	3107
BspT107I	GGYRCC	2 cut(s)	800, 970
BspTNI	GGTCTC	2 cut(s)	525, 2947
BsrDI	GCAATG	3 cut(s)	2014, 2262, 3740
BsrFI	RCCGGY	2 cut(s)	151, 1912
BsrGI	TGTACA	1 cut(s)	1996
BsrI	ACTGG	9 cut(s)	451, 978, 1251, 2278, 2361, 2464, 3031, 3281, 3567
BssAI	RCCGGY	2 cut(s)	151, 1912
BssNAI	GTATAC	1 cut(s)	3002
BssNI	GRCGYC	4 cut(s)	505, 1315, 3462, 3776
BssT1I	CCWWGG	3 cut(s)	431, 2038, 2599
Bst1107I	GTATAC	1 cut(s)	3002
Bst2UI	CCWGG	8 cut(s)	213, 1083, 1617, 1633, 1928, 2310, 3021, 3228
Bst6I	CTCTTC	3 cut(s)	28, 1896, 2952
BstACI	GRCGYC	4 cut(s)	505, 1315, 3462, 3776
BstAPI	GCANNNNNTGC	2 cut(s)	1475, 2761
BstAUI	TGTACA	1 cut(s)	1996
BstBI	TTCGAA	1 cut(s)	3107
BstDSI	CCRYGG	2 cut(s)	431, 2038
BstEII	GGTNACC	1 cut(s)	2672
BstENI	CCTNNNNNAGG	2 cut(s)	810, 2994
BstH2I	RGCGCY	1 cut(s)	1565
BstHHI	GCGC	4 cut(s)	1564, 3071, 3172, 3692
BstMAI	GTCTC	7 cut(s)	2, 7, 525, 821, 2231, 2805, 2947
BstMCI	CGRYCG	1 cut(s)	186
BstNI	CCWGG	8 cut(s)	213, 1083, 1617, 1633, 1928, 2310, 3021, 3228
BstNSI	RCATGY	2 cut(s)	719, 3208
BstPI	GGTNACC	1 cut(s)	2672
BstSFI	CTRYAG	6 cut(s)	1491, 2700, 2730, 2753, 3477, 3588
BstSLI	GKGCMC	2 cut(s)	805, 1194
BstV2I	GAAGAC	5 cut(s)	1959, 2040, 3139, 3693, 3779
BstX2I	RGATCY	4 cut(s)	208, 242, 2359, 3420
BstXI	CCANNNNNNTGG	1 cut(s)	1246
BstYI	RGATCY	4 cut(s)	208, 242, 2359, 3420
BstZ17I	GTATAC	1 cut(s)	3002
Bsu15I	ATCGAT	2 cut(s)	111, 1433
Bsu36I	CCTNAGG	1 cut(s)	2472
BsuI	GTATCC	1 cut(s)	994
BsuTUI	ATCGAT	2 cut(s)	111, 1433
BtgI	CCRYGG	2 cut(s)	431, 2038
BtgZI	GCGATG	1 cut(s)	2103
BtrI	CACGTC	1 cut(s)	3218
BtsI	GCAGTG	1 cut(s)	1123
BtsIMutI	CAGTG	3 cut(s)	1123, 2209, 2691
BveI	ACCTGC	4 cut(s)	145, 208, 359, 1832
CaiI	CAGNNNCTG	2 cut(s)	761, 1532
CfoI	GCGC	4 cut(s)	1564, 3071, 3172, 3692
Cfr10I	RCCGGY	2 cut(s)	151, 1912
ClaI	ATCGAT	2 cut(s)	111, 1433
CseI	GACGC	3 cut(s)	335, 513, 1323
Csp6I	GTAC	9 cut(s)	660, 971, 1086, 1349, 1997, 3024, 3133, 3317, 3499
CviQI	GTAC	9 cut(s)	660, 971, 1086, 1349, 1997, 3024, 3133, 3317, 3499
DraI	TTTAAA	2 cut(s)	423, 2793
DraIII	CACNNNGTG	1 cut(s)	2138
EaeI	YGGCCR	2 cut(s)	351, 1914
Eam1104I	CTCTTC	3 cut(s)	28, 1896, 2952
EarI	CTCTTC	3 cut(s)	28, 1896, 2952
EciI	GGCGGA	2 cut(s)	161, 398
Ecl136II	GAGCTC	1 cut(s)	2900
Eco130I	CCWWGG	3 cut(s)	431, 2038, 2599
Eco147I	AGGCCT	2 cut(s)	85, 1993
Eco24I	GRGCYC	1 cut(s)	2902
Eco31I	GGTCTC	2 cut(s)	525, 2947
Eco32I	GATATC	1 cut(s)	1431
Eco47I	GGWCC	7 cut(s)	197, 584, 1126, 1520, 1865, 1910, 3014
Eco47III	AGCGCT	1 cut(s)	1563
Eco53kI	GAGCTC	1 cut(s)	2900
Eco57I	CTGAAG	7 cut(s)	84, 357, 584, 682, 2933, 3687, 3713
Eco81I	CCTNAGG	1 cut(s)	2472
Eco88I	CYCGRG	1 cut(s)	795
Eco91I	GGTNACC	1 cut(s)	2672
EcoICRI	GAGCTC	1 cut(s)	2900
EcoNI	CCTNNNNNAGG	2 cut(s)	810, 2994
EcoO109I	RGGNCCY	5 cut(s)	197, 485, 852, 870, 1865
EcoO65I	GGTNACC	1 cut(s)	2672
EcoRI	GAATTC	1 cut(s)	1271
EcoRII	CCWGG	8 cut(s)	211, 1081, 1615, 1631, 1926, 2308, 3019, 3226
EcoRV	GATATC	1 cut(s)	1431
EcoT14I	CCWWGG	3 cut(s)	431, 2038, 2599
EcoT38I	GRGCYC	1 cut(s)	2902
ErhI	CCWWGG	3 cut(s)	431, 2038, 2599
Esp3I	CGTCTC	2 cut(s)	2, 7
FalI	AAGNNNNNCTT	6 cut(s)	1887, 1919, 1926, 1958, 3685, 3717
FaqI	GGGAC	5 cut(s)	281, 1142, 1485, 1923, 3594
FauNDI	CATATG	2 cut(s)	1446, 2746
FbaI	TGATCA	1 cut(s)	3679
FblI	GTMKAC	2 cut(s)	3001, 3214
FriOI	GRGCYC	1 cut(s)	2902
FspBI	CTAG	8 cut(s)	1311, 1662, 2058, 2085, 2363, 2865, 3347, 3437
FspI	TGCGCA	1 cut(s)	3691
GlaI	GCGC	4 cut(s)	1563, 3070, 3171, 3691
GsaI	CCCAGC	2 cut(s)	549, 2665
GsuI	CTGGAG	4 cut(s)	246, 1222, 2331, 3584
HaeII	RGCGCY	1 cut(s)	1565
HapII	CCGG	8 cut(s)	152, 233, 508, 1913, 2246, 2372, 2957, 3376
HgaI	GACGC	3 cut(s)	335, 513, 1323
HhaI	GCGC	4 cut(s)	1564, 3071, 3172, 3692
Hin1I	GRCGYC	4 cut(s)	505, 1315, 3462, 3776
Hin6I	GCGC	4 cut(s)	1562, 3069, 3170, 3690
HinP1I	GCGC	4 cut(s)	1562, 3069, 3170, 3690
HincII	GTYRAC	1 cut(s)	1809
HindII	GTYRAC	1 cut(s)	1809
HindIII	AAGCTT	4 cut(s)	1320, 2231, 2481, 2717
HinfI	GANTC	9 cut(s)	190, 221, 463, 1205, 1601, 1643, 1983, 3520, 3707
HpaII	CCGG	8 cut(s)	152, 233, 508, 1913, 2246, 2372, 2957, 3376
Hpy166II	GTNNAC	9 cut(s)	495, 560, 1192, 1809, 2325, 2387, 3002, 3215, 3274
Hpy8I	GTNNAC	9 cut(s)	495, 560, 1192, 1809, 2325, 2387, 3002, 3215, 3274
Hpy99I	CGWCG	5 cut(s)	145, 329, 3467, 3715, 3781
HpyCH4IV	ACGT	8 cut(s)	16, 2606, 2759, 2921, 3135, 3217, 3462, 3776
HpySE526I	ACGT	8 cut(s)	16, 2606, 2759, 2921, 3135, 3217, 3462, 3776
Hsp92I	GRCGYC	4 cut(s)	505, 1315, 3462, 3776
HspAI	GCGC	4 cut(s)	1562, 3069, 3170, 3690
Kpn2I	TCCGGA	1 cut(s)	2371
KpnI	GGTACC	1 cut(s)	974
Ksp22I	TGATCA	1 cut(s)	3679
LguI	GCTCTTC	1 cut(s)	28
LmnI	GCTCC	4 cut(s)	433, 763, 903, 2897
MaeI	CTAG	8 cut(s)	1311, 1662, 2058, 2085, 2363, 2865, 3347, 3437
MaeII	ACGT	8 cut(s)	16, 2606, 2759, 2921, 3135, 3217, 3462, 3776
MfeI	CAATTG	1 cut(s)	924
MflI	RGATCY	4 cut(s)	208, 242, 2359, 3420
MhlI	GDGCHC	4 cut(s)	579, 805, 1194, 2902
MlsI	TGGCCA	1 cut(s)	353
MluNI	TGGCCA	1 cut(s)	353
MlyI	GAGTC	1 cut(s)	3701
MmeI	TCCRAC	3 cut(s)	481, 2262, 2829
Mox20I	TGGCCA	1 cut(s)	353
MroI	TCCGGA	1 cut(s)	2371
MroXI	GAANNNNTTC	4 cut(s)	1271, 3263, 3309, 3662
MscI	TGGCCA	1 cut(s)	353
MslI	CAYNNNNRTG	1 cut(s)	636
Msp20I	TGGCCA	1 cut(s)	353
MspA1I	CMGCKG	1 cut(s)	119
MspI	CCGG	8 cut(s)	152, 233, 508, 1913, 2246, 2372, 2957, 3376
MunI	CAATTG	1 cut(s)	924
MvaI	CCWGG	8 cut(s)	213, 1083, 1617, 1633, 1928, 2310, 3021, 3228
NciI	CCSGG	2 cut(s)	509, 3376
NcoI	CCATGG	2 cut(s)	431, 2038
NdeI	CATATG	2 cut(s)	1446, 2746
NheI	GCTAGC	1 cut(s)	2057
NmuCI	GTSAC	6 cut(s)	683, 1844, 2516, 2672, 3509, 3529
NsbI	TGCGCA	1 cut(s)	3691
NspI	RCATGY	2 cut(s)	719, 3208
NspV	TTCGAA	1 cut(s)	3107
PaqCI	CACCTGC	2 cut(s)	359, 1832
PasI	CCCWGGG	1 cut(s)	1927
PceI	AGGCCT	2 cut(s)	85, 1993
PciSI	GCTCTTC	1 cut(s)	28
PdmI	GAANNNNTTC	4 cut(s)	1271, 3263, 3309, 3662
PfeI	GAWTC	8 cut(s)	190, 221, 463, 1205, 1601, 1643, 1983, 3520
PfoI	TCCNGGA	2 cut(s)	211, 2308
Ple19I	CGATCG	1 cut(s)	186
PleI	GAGTC	1 cut(s)	3701
PpsI	GAGTC	1 cut(s)	3701
PpuMI	RGGWCCY	2 cut(s)	197, 1865
PshBI	ATTAAT	1 cut(s)	2159
Psp124BI	GAGCTC	1 cut(s)	2902
Psp1406I	AACGTT	2 cut(s)	2606, 2921
Psp5II	RGGWCCY	2 cut(s)	197, 1865
Psp6I	CCWGG	8 cut(s)	211, 1081, 1615, 1631, 1926, 2308, 3019, 3226
PspEI	GGTNACC	1 cut(s)	2672
PspFI	CCCAGC	2 cut(s)	545, 2661
PspGI	CCWGG	8 cut(s)	211, 1081, 1615, 1631, 1926, 2308, 3019, 3226
PspPPI	RGGWCCY	2 cut(s)	197, 1865
PstI	CTGCAG	3 cut(s)	2734, 2757, 3592
PstNI	CAGNNNCTG	2 cut(s)	761, 1532
PsuI	RGATCY	4 cut(s)	208, 242, 2359, 3420
PvuI	CGATCG	1 cut(s)	186
RsaI	GTAC	9 cut(s)	661, 972, 1087, 1350, 1998, 3025, 3134, 3318, 3500
RsaNI	GTAC	9 cut(s)	660, 971, 1086, 1349, 1997, 3024, 3133, 3317, 3499
RseI	CAYNNNNRTG	1 cut(s)	636
SacI	GAGCTC	1 cut(s)	2902
SapI	GCTCTTC	1 cut(s)	28
ScaI	AGTACT	2 cut(s)	661, 1350
SchI	GAGTC	1 cut(s)	3701
SduI	GDGCHC	4 cut(s)	579, 805, 1194, 2902
SfcI	CTRYAG	6 cut(s)	1491, 2700, 2730, 2753, 3477, 3588
SfuI	TTCGAA	1 cut(s)	3107
SinI	GGWCC	7 cut(s)	197, 584, 1126, 1520, 1865, 1910, 3014
SmiMI	CAYNNNNRTG	1 cut(s)	636
SmlI	CTYRAG	4 cut(s)	602, 2234, 2804, 3424
SmoI	CTYRAG	4 cut(s)	602, 2234, 2804, 3424
SseBI	AGGCCT	2 cut(s)	85, 1993
SspI	AATATT	1 cut(s)	2163
SspMI	CTAG	8 cut(s)	1311, 1662, 2058, 2085, 2363, 2865, 3347, 3437
SstI	GAGCTC	1 cut(s)	2902
StuI	AGGCCT	2 cut(s)	85, 1993
StyI	CCWWGG	3 cut(s)	431, 2038, 2599
TaiI	ACGT	8 cut(s)	19, 2609, 2762, 2924, 3138, 3220, 3465, 3779
TaqII	GACCGA	1 cut(s)	2660
TatI	WGTACW	3 cut(s)	659, 1348, 1996
TauI	GCSGC	2 cut(s)	119, 407
TfiI	GAWTC	8 cut(s)	190, 221, 463, 1205, 1601, 1643, 1983, 3520
TscAI	CASTG	3 cut(s)	1123, 2209, 2698
TseFI	GTSAC	6 cut(s)	683, 1844, 2516, 2672, 3509, 3529
Tsp45I	GTSAC	6 cut(s)	683, 1844, 2516, 2672, 3509, 3529
TspRI	CASTG	3 cut(s)	1123, 2209, 2698
VneI	GTGCAC	1 cut(s)	1190
VpaK11BI	GGWCC	7 cut(s)	197, 584, 1126, 1520, 1865, 1910, 3014
VspI	ATTAAT	1 cut(s)	2159
XagI	CCTNNNNNAGG	2 cut(s)	810, 2994
XapI	RAATTY	7 cut(s)	748, 1271, 1283, 1471, 1856, 2828, 3073
XceI	RCATGY	2 cut(s)	719, 3208
XmiI	GTMKAC	2 cut(s)	3001, 3214
XmnI	GAANNNNTTC	4 cut(s)	1271, 3263, 3309, 3662
XspI	CTAG	8 cut(s)	1311, 1662, 2058, 2085, 2363, 2865, 3347, 3437
ZraI	GACGTC	2 cut(s)	3463, 3777
ZrmI	AGTACT	2 cut(s)	661, 1350

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.