Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0006487

Physical Location & Seq

Genomic Coordinates Forward (+)

42028175 .. 42033203

Gene Structure 5029 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1305400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGTTTAGCGGTTCTTCTAGTGCCAATTTTGACTTGACTGGCAGCATTTCTAAGATACTTGACGAGCAAAGGGAAATCAGAGAACTTCTTCACAATTTTGATACTCCAATGTCGATATCAACTAGACGACAACGTCGACAAGCATTTAAAGAAAAACTGCAACAAGGAATTCTACGTCATGATGATATTGATGTCTCATTCGAAAGTTTTCCATATTACCTAAGTGAAACAACAAAGAAGGTTTTGATTGCATCCACCCACCCGAATTTGAGGTGTAGCAAGTTTGGAAAATATTTTTCATCACTACCTACCGGGAGCCCGCGCATATTATTATCTGGTCCAGCAGGTTCTGAGATATATCAGGAAACCTTGGCAAAGGCACTCGCGAAACATTTTGGCGCTAGATTACTAATTGTTGAGGCACCACCGCCCAAGGATTCTGATTCTGTTAAAGAAGTACCAAGGCTTGAAAGATTTTCCACATTTACGAAACGAGCAGCTCGTGCAATCCGTGAACTTCTTGAGGTACTCATCTCCTTGCACTTTTCTGGAGGTGATGATATTAACAATCTTGCAATCGGTGAACTTCTTGAGGCGGCAACCAATGAGAGTAAAAGTCTTCCTATGATAGTGTTTTTGAAAGATATAGAAAAGGTTATGGCAGGTAACCCATATGCATATAGTGTCTTGAAGGGTAAGCTTGCAAACTTGCCAGAGAATGTTGTTGTGATCGGCTCTCATACCCAGTTGGACAATCGCAAGGCAAAGGATAACCTTGGTGGTAGACTGCATGATAGGAGTAAAGAAACTCCTAAAACTAAGGAGCAAGTTCAACTCTCTCGGATTTTCACCAACACAGTGACCATACAGCTGCCCCACGATGATGCTTTACTTTCGGACTTGAAGCAGCAGTTGGAACGTGATGTTGAAACTTTGAAATCGCAGTCTAATATTGTTACCATTCGCTCAGTTCTTAACCGAGTTTCTGTGGATTGCCCTGACCTTGAAAGTCTGTGCATTAAAGATCTAGTGCTTACAACTGAAAGTGTTGACAAAGTAGTAGGCTGGGCTGTTAGTCACCATCTTATGCATTGTTCAGACGCTTTAGTTAAAGATGACAAACTTGTTATTTCTACTGAAAGTCTTAGGGATGGACTAAACATTCTACAAGGCATTCAAAACGAAAACAAGAGCATAAAGAAATCACTTAAGGATGTGGTTACTGGAAATGAATTTGAGAGAAAACTTCTTGCTGATGTTATTCCACCGAGCGATATTGGGATTACTTTTGATGACATCGGGGCCTTGGAAAATGTGAAGGACACCCTAAAGGAGTTGGTGATGCTTCCTCTTCAGAGGCCTGAATTATTTAGCAAGGGACAGTTGACTAAGCCTTGTAAAGGAATCTTGCTATTTGGTCCTCCGGGTACTGGAAAGACTATGCTTGCAAAGGCTGTTGCAACTGAAGCTGGTGCAAACTTTATTAACATATCAATGTCAAGTATTACTTCAAAGGGGTTTGGGGATGGAGAGAAGTACGTTAAAGCGGTGTTCTCCTTAGCTAGTAAAATTGCCCCTAGTGTTGTTTTTGTAGATGAGGTTGACAGCATGTTAGGCAGACGTGAAAATCGTGGGGAACATGAGGCTATGCGTAAAATGAAAAATGAGTTCATGGTTAACTGGGATGGTCTGCTTTCAACGGATAAAGAACGTGTATTGGTACTTGCTGCTACTAATAGGCCTTTTGACCTTGATGAGGCTGTTATTAGGAGGCTTCCGAGGAGATTCATGGTGAACTTGCCAGATGCCCAGAACAGAGAAAAAATGCTGAGAGTTGTATTGGCCAAAGAAGATTTGGATCCTGACGTTGATTTGGAAGCAGTTGCAAATATGACAGATGGGTATTCGGGAAGTGACTTAAAGAATCTGTGTGTTGCTGCAGCACACCTCCCCATTAGGGAAATTTTAGAGAAAGAGAAAAAGGAGGGAAGTTTAGCTTTGGCGGAGAACAGGCCTGTACCGGAGTTGTACTGCAGTACCGACATTCGTCCCTTGAAGATGGAGGACTTCAAACATGCGCATGAGCAGGTGTGTGCAAGTGTGTCTTCGGAGTCCACAAACATGAGTGAGCTCCTTCGATGGAATGACCTATACGGCGAAGGCGGATCAAGAAAGAAGACGTCTCTCAGCTATTTTATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002090 GO:0002092 GO:0003008 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0007610 GO:0007611 GO:0007612 GO:0007613 GO:0008150 GO:0009893 GO:0010604 GO:0010646 GO:0010648 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0023051 GO:0023057 GO:0030100 GO:0031323 GO:0031325 GO:0032501 GO:0032879 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044456 GO:0044459 GO:0044464 GO:0045202 GO:0045211 GO:0045807 GO:0048259 GO:0048260 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050804 GO:0050805 GO:0050877 GO:0050890 GO:0051049 GO:0051050 GO:0051128 GO:0051130 GO:0051966 GO:0051967 GO:0060255 GO:0060627 GO:0065007 GO:0071944 GO:0097060 GO:0098590 GO:0098794 GO:0099177

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FHA

Protein Analysis

734

Amino Acids

81.61

Weight (kDa)

6.48

Isoelectric Point (pI)

36.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7751	PF24933	330 - 390	1.7e-26	Domain of unknown function (DUF7751)
AAA	PF00004	469 - 599	1e-36	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	622 - 658	1.1e-13	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006487)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02890 AT1G02890 AT4G02480
fragaria_vesca	FvH4_2g25490 FvH4_2g25490 FvH4_2g25490
malus_domestica	MD03G1285800.v1.1 MD11G1305200.v1.1 MD11G1305300.v1.1 MD11G1305400.v1.1
prunus_persica	Prupe.8G259000_v2.0.a1 Prupe.8G259000_v2.0.a1 Prupe.8G259000_v2.0.a1 Prupe.8G259000_v2.0.a1
pyrus_communis	pycom03g22650 pycom11g26700 pycom11g26720
rosa_chinensis	RchiOBHm_Chr6g0293701
rosa_laevigata	RLG00000011931
rosa_roxburghii	Rroxscaffold_7G00173960
rosa_rugosa	Rorug06G0237500
rosa_samantha	Rh6AG350200 Rh6BG357700 Rh6CG364500 Rh6DG351400
rosa_wichuraiana	Rw6G030490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2077
AasI	GACNNNNNNGTC	1 cut(s)	132
AatII	GACGTC	1 cut(s)	2183
Acc16I	TGCGCA	1 cut(s)	2079
Acc36I	ACCTGC	3 cut(s)	335, 653, 2077
AccB1I	GGYRCC	1 cut(s)	421
AccI	GTMKAC	2 cut(s)	136, 784
AccII	CGCG	2 cut(s)	322, 386
AciI	CCGC	7 cut(s)	9, 320, 428, 596, 1547, 2003, 2163
AclWI	GGATC	3 cut(s)	1853, 1866, 2173
AcoI	YGGCCR	1 cut(s)	1842
AcsI	RAATTY	4 cut(s)	168, 265, 1232, 1962
AcuI	CTGAAG	2 cut(s)	1337, 1485
AcyI	GRCGYC	1 cut(s)	2180
AfaI	GTAC	8 cut(s)	459, 528, 1429, 1538, 1722, 2019, 2030, 2038
AfiI	CCNNNNNNNGG	4 cut(s)	1400, 1430, 1756, 1957
AflII	CTTAAG	1 cut(s)	1208
AflIII	ACRYGT	1 cut(s)	1711
AjiI	CACGTC	1 cut(s)	1622
AjuI	GAANNNNNNNTTGG	2 cut(s)	896, 928
AluBI	AGCT	8 cut(s)	500, 700, 871, 1469, 1562, 1997, 2131, 2190
AluI	AGCT	8 cut(s)	500, 700, 871, 1469, 1562, 1997, 2131, 2190
Alw21I	GWGCWC	1 cut(s)	2133
Alw26I	GTCTC	2 cut(s)	199, 2187
AlwI	GGATC	3 cut(s)	1853, 1866, 2173
AlwNI	CAGNNNCTG	1 cut(s)	350
AoxI	GGCC	5 cut(s)	1302, 1358, 1739, 1842, 2012
ApeKI	GCWGC	7 cut(s)	42, 497, 871, 907, 1727, 1937, 1940
ApoI	RAATTY	4 cut(s)	168, 265, 1232, 1962
Asp700I	GAANNNNTTC	2 cut(s)	87, 207
AspLEI	GCGC	3 cut(s)	324, 401, 2080
AspS9I	GGNCC	3 cut(s)	338, 1302, 1418
AsuC2I	CCSGG	2 cut(s)	313, 1425
AsuHPI	GGTGA	6 cut(s)	566, 593, 841, 1070, 1351, 1804
AsuII	TTCGAA	1 cut(s)	201
AvaII	GGWCC	2 cut(s)	338, 1418
BaeI	ACNNNNGTAYC	2 cut(s)	2020, 2053
BalI	TGGCCA	1 cut(s)	1844
BamHI	GGATCC	1 cut(s)	1858
BanI	GGYRCC	1 cut(s)	421
BanII	GRGCYC	2 cut(s)	320, 2133
BauI	CACGAG	1 cut(s)	501
BbsI	GAAGAC	3 cut(s)	611, 2097, 2183
Bbv12I	GWGCWC	1 cut(s)	2133
BbvI	GCAGC	7 cut(s)	54, 509, 858, 919, 1714, 1924, 1952
BccI	CCATC	7 cut(s)	1089, 1145, 1520, 1679, 1892, 2053, 2133
BceAI	ACGGC	1 cut(s)	2170
BcnI	CCSGG	2 cut(s)	313, 1425
BcoDI	GTCTC	2 cut(s)	199, 2187
BfaI	CTAG	6 cut(s)	18, 123, 402, 1028, 1563, 1578
BfmI	CTRYAG	2 cut(s)	1938, 2032
BfoI	RGCGCY	1 cut(s)	402
BfrI	CTTAAG	1 cut(s)	1208
BfuAI	ACCTGC	3 cut(s)	335, 653, 2077
BglII	AGATCT	1 cut(s)	1024
BisI	GCNGC	8 cut(s)	43, 498, 597, 872, 908, 1728, 1938, 1941
BlsI	GCNGC	8 cut(s)	44, 499, 598, 873, 909, 1729, 1939, 1942
Bme1390I	CCNGG	2 cut(s)	313, 1425
Bme18I	GGWCC	2 cut(s)	338, 1418
BmgBI	CACGTC	1 cut(s)	1622
BmgT120I	GGNCC	3 cut(s)	338, 1302, 1418
BmiI	GGNNCC	4 cut(s)	317, 423, 1303, 1860
BmrFI	CCNGG	2 cut(s)	313, 1425
BmrI	ACTGGG	2 cut(s)	739, 1690
BmsI	GCATC	4 cut(s)	260, 874, 1332, 1795
BmuI	ACTGGG	2 cut(s)	739, 1690
BoxI	GACNNNNGTC	1 cut(s)	2046
BpiI	GAAGAC	3 cut(s)	611, 2097, 2183
BpmI	CTGGAG	1 cut(s)	570
Bpu10I	CCTNAGC	1 cut(s)	1558
Bpu14I	TTCGAA	1 cut(s)	201
BpuEI	CTTGAG	2 cut(s)	542, 611
BpuMI	CCSGG	2 cut(s)	313, 1425
BsaBI	GATNNNNATC	1 cut(s)	1857
BsaHI	GRCGYC	1 cut(s)	2180
BsaJI	CCNNGG	6 cut(s)	369, 432, 461, 775, 1305, 1778
BsaWI	WCCGGW	1 cut(s)	2020
Bsc4I	CCNNNNNNNGG	4 cut(s)	1400, 1430, 1756, 1957
Bse1I	ACTGG	5 cut(s)	43, 745, 1228, 1435, 1685
Bse8I	GATNNNNATC	1 cut(s)	1857
BseDI	CCNNGG	6 cut(s)	369, 432, 461, 775, 1305, 1778
BseGI	GGATG	5 cut(s)	251, 1156, 1219, 1531, 1690
BseJI	GATNNNNATC	1 cut(s)	1857
BseLI	CCNNNNNNNGG	4 cut(s)	1400, 1430, 1756, 1957
BseMII	CTCAG	4 cut(s)	342, 981, 1820, 2200
BseNI	ACTGG	5 cut(s)	43, 745, 1228, 1435, 1685
BseRI	GAGGAG	1 cut(s)	1795
BseXI	GCAGC	7 cut(s)	54, 509, 858, 919, 1714, 1924, 1952
BseYI	CCCAGC	1 cut(s)	1065
Bsh1236I	CGCG	2 cut(s)	322, 386
BshFI	GGCC	5 cut(s)	1304, 1360, 1741, 1844, 2014
BshNI	GGYRCC	1 cut(s)	421
BsiHKAI	GWGCWC	1 cut(s)	2133
BsiSI	CCGG	3 cut(s)	312, 1424, 2021
BslFI	GGGAC	2 cut(s)	1392, 2034
BslI	CCNNNNNNNGG	4 cut(s)	1400, 1430, 1756, 1957
BsmAI	GTCTC	2 cut(s)	199, 2187
BsmBI	CGTCTC	1 cut(s)	2187
BsmFI	GGGAC	2 cut(s)	1392, 2034
BsmI	GAATGC	1 cut(s)	1173
BsnI	GGCC	5 cut(s)	1304, 1360, 1741, 1844, 2014
Bsp119I	TTCGAA	1 cut(s)	201
Bsp1286I	GDGCHC	2 cut(s)	320, 2133
Bsp143I	GATC	4 cut(s)	729, 1024, 1858, 2165
Bsp68I	TCGCGA	1 cut(s)	386
BspACI	CCGC	7 cut(s)	9, 320, 428, 596, 1547, 2003, 2163
BspANI	GGCC	5 cut(s)	1304, 1360, 1741, 1844, 2014
BspCNI	CTCAG	4 cut(s)	343, 980, 1821, 2199
BspFNI	CGCG	2 cut(s)	322, 386
BspHI	TCATGA	1 cut(s)	178
BspLI	GGNNCC	4 cut(s)	317, 423, 1303, 1860
BspMAI	CTGCAG	2 cut(s)	1942, 2036
BspMI	ACCTGC	3 cut(s)	335, 653, 2077
BspPI	GGATC	3 cut(s)	1853, 1866, 2173
BspT104I	TTCGAA	1 cut(s)	201
BspT107I	GGYRCC	1 cut(s)	421
BspTI	CTTAAG	1 cut(s)	1208
BsrI	ACTGG	5 cut(s)	43, 745, 1228, 1435, 1685
BssECI	CCNNGG	6 cut(s)	369, 432, 461, 775, 1305, 1778
BssMI	GATC	4 cut(s)	729, 1024, 1858, 2165
BssNI	GRCGYC	1 cut(s)	2180
BssSI	CACGAG	1 cut(s)	501
BssT1I	CCWWGG	5 cut(s)	369, 432, 461, 775, 1305
Bst2BI	CACGAG	1 cut(s)	501
Bst4CI	ACNGT	2 cut(s)	859, 1383
Bst6I	CTCTTC	1 cut(s)	1356
BstACI	GRCGYC	1 cut(s)	2180
BstAFI	CTTAAG	1 cut(s)	1208
BstAPI	GCANNNNNTGC	1 cut(s)	503
BstBI	TTCGAA	1 cut(s)	201
BstC8I	GCNNGC	3 cut(s)	320, 702, 1446
BstEII	GGTNACC	1 cut(s)	665
BstENI	CCTNNNNNAGG	2 cut(s)	1398, 1754
BstF5I	GGATG	5 cut(s)	251, 1156, 1219, 1531, 1690
BstFNI	CGCG	2 cut(s)	322, 386
BstH2I	RGCGCY	1 cut(s)	402
BstHHI	GCGC	3 cut(s)	324, 401, 2080
BstKTI	GATC	4 cut(s)	732, 1027, 1861, 2168
BstMAI	GTCTC	2 cut(s)	199, 2187
BstMBI	GATC	4 cut(s)	729, 1024, 1858, 2165
BstMWI	GCNNNNNNNGC	3 cut(s)	503, 1466, 1614
BstNSI	RCATGY	2 cut(s)	1612, 2078
BstPAI	GACNNNNGTC	1 cut(s)	2046
BstPI	GGTNACC	1 cut(s)	665
BstSCI	CCNGG	2 cut(s)	311, 1423
BstSFI	CTRYAG	2 cut(s)	1938, 2032
BstUI	CGCG	2 cut(s)	322, 386
BstV1I	GCAGC	7 cut(s)	54, 509, 858, 919, 1714, 1924, 1952
BstV2I	GAAGAC	3 cut(s)	611, 2097, 2183
BstX2I	RGATCY	2 cut(s)	1024, 1858
BstYI	RGATCY	2 cut(s)	1024, 1858
BsuRI	GGCC	5 cut(s)	1304, 1360, 1741, 1844, 2014
BtrI	CACGTC	1 cut(s)	1622
BtsCI	GGATG	5 cut(s)	251, 1156, 1219, 1531, 1690
BtsIMutI	CAGTG	1 cut(s)	864
BtuMI	TCGCGA	1 cut(s)	386
BveI	ACCTGC	3 cut(s)	335, 653, 2077
Cac8I	GCNNGC	3 cut(s)	320, 702, 1446
CaiI	CAGNNNCTG	1 cut(s)	350
CciI	TCATGA	1 cut(s)	178
CfoI	GCGC	3 cut(s)	324, 401, 2080
Cfr13I	GGNCC	3 cut(s)	338, 1302, 1418
CseI	GACGC	1 cut(s)	1109
Csp6I	GTAC	8 cut(s)	458, 527, 1428, 1537, 1721, 2018, 2029, 2037
CviAII	CATG	9 cut(s)	179, 791, 1609, 1640, 1672, 1789, 2075, 2081, 2122
CviQI	GTAC	8 cut(s)	458, 527, 1428, 1537, 1721, 2018, 2029, 2037
DpnI	GATC	4 cut(s)	731, 1026, 1860, 2167
DpnII	GATC	4 cut(s)	729, 1024, 1858, 2165
DraI	TTTAAA	1 cut(s)	148
DrdI	GACNNNNNNGTC	1 cut(s)	132
DseDI	GACNNNNNNGTC	1 cut(s)	132
EaeI	YGGCCR	1 cut(s)	1842
Eam1104I	CTCTTC	1 cut(s)	1356
EarI	CTCTTC	1 cut(s)	1356
EciI	GGCGGA	2 cut(s)	2018, 2178
Ecl136II	GAGCTC	1 cut(s)	2131
Eco130I	CCWWGG	5 cut(s)	369, 432, 461, 775, 1305
Eco147I	AGGCCT	3 cut(s)	1360, 1741, 2014
Eco24I	GRGCYC	2 cut(s)	320, 2133
Eco32I	GATATC	1 cut(s)	117
Eco47I	GGWCC	2 cut(s)	338, 1418
Eco53kI	GAGCTC	1 cut(s)	2131
Eco57I	CTGAAG	2 cut(s)	1337, 1485
Eco91I	GGTNACC	1 cut(s)	665
EcoICRI	GAGCTC	1 cut(s)	2131
EcoNI	CCTNNNNNAGG	2 cut(s)	1398, 1754
EcoO109I	RGGNCCY	1 cut(s)	1302
EcoO65I	GGTNACC	1 cut(s)	665
EcoRI	GAATTC	1 cut(s)	168
EcoRV	GATATC	1 cut(s)	117
EcoT14I	CCWWGG	5 cut(s)	369, 432, 461, 775, 1305
EcoT22I	ATGCAT	2 cut(s)	679, 1092
EcoT38I	GRGCYC	2 cut(s)	320, 2133
ErhI	CCWWGG	5 cut(s)	369, 432, 461, 775, 1305
Esp3I	CGTCTC	1 cut(s)	2187
FaeI	CATG	9 cut(s)	182, 794, 1612, 1643, 1675, 1792, 2078, 2084, 2125
FalI	AAGNNNNNCTT	6 cut(s)	1492, 1524, 1981, 2013, 2089, 2121
FaqI	GGGAC	2 cut(s)	1392, 2034
FatI	CATG	9 cut(s)	178, 790, 1608, 1639, 1671, 1788, 2074, 2080, 2121
FauI	CCCGC	1 cut(s)	327
FauNDI	CATATG	1 cut(s)	673
FblI	GTMKAC	2 cut(s)	136, 784
Fnu4HI	GCNGC	8 cut(s)	43, 498, 597, 872, 908, 1728, 1938, 1941
FokI	GGATG	5 cut(s)	238, 1163, 1226, 1538, 1697
FriOI	GRGCYC	2 cut(s)	320, 2133
Fsp4HI	GCNGC	8 cut(s)	43, 498, 597, 872, 908, 1728, 1938, 1941
FspAI	RTGCGCAY	1 cut(s)	2079
FspBI	CTAG	6 cut(s)	18, 123, 402, 1028, 1563, 1578
FspI	TGCGCA	1 cut(s)	2079
GlaI	GCGC	3 cut(s)	323, 400, 2079
GluI	GCNGC	8 cut(s)	43, 498, 597, 872, 908, 1728, 1938, 1941
GsaI	CCCAGC	1 cut(s)	1069
GsuI	CTGGAG	1 cut(s)	570
HaeII	RGCGCY	1 cut(s)	402
HaeIII	GGCC	5 cut(s)	1304, 1360, 1741, 1844, 2014
HapII	CCGG	3 cut(s)	312, 1424, 2021
HgaI	GACGC	1 cut(s)	1109
HhaI	GCGC	3 cut(s)	324, 401, 2080
Hin1I	GRCGYC	1 cut(s)	2180
Hin1II	CATG	9 cut(s)	182, 794, 1612, 1643, 1675, 1792, 2078, 2084, 2125
Hin6I	GCGC	3 cut(s)	322, 399, 2078
HinP1I	GCGC	3 cut(s)	322, 399, 2078
HincII	GTYRAC	5 cut(s)	137, 1051, 1386, 1603, 1678
HindII	GTYRAC	5 cut(s)	137, 1051, 1386, 1603, 1678
HindIII	AAGCTT	1 cut(s)	698
HinfI	GANTC	6 cut(s)	437, 443, 1404, 1785, 1924, 2111
HpaI	GTTAAC	1 cut(s)	1678
HpaII	CCGG	3 cut(s)	312, 1424, 2021
HphI	GGTGA	6 cut(s)	566, 593, 841, 1070, 1351, 1804
Hpy188I	TCNGA	9 cut(s)	80, 352, 442, 843, 898, 1099, 1356, 1779, 2110
Hpy99I	CGWCG	1 cut(s)	138
HpyAV	CCTTC	5 cut(s)	232, 685, 1312, 2144, 2153
HpyCH4III	ACNGT	2 cut(s)	859, 1383
HpyCH4IV	ACGT	8 cut(s)	133, 175, 919, 1539, 1621, 1711, 1866, 2180
HpyF10VI	GCNNNNNNNGC	3 cut(s)	503, 1466, 1614
HpySE526I	ACGT	8 cut(s)	133, 175, 919, 1539, 1621, 1711, 1866, 2180
Hsp92I	GRCGYC	1 cut(s)	2180
Hsp92II	CATG	9 cut(s)	182, 794, 1612, 1643, 1675, 1792, 2078, 2084, 2125
HspAI	GCGC	3 cut(s)	322, 399, 2078
KspAI	GTTAAC	1 cut(s)	1678
Kzo9I	GATC	4 cut(s)	729, 1024, 1858, 2165
LmnI	GCTCC	3 cut(s)	315, 823, 2136
Lsp1109I	GCAGC	7 cut(s)	54, 509, 858, 919, 1714, 1924, 1952
LweI	GCATC	4 cut(s)	260, 874, 1332, 1795
MaeI	CTAG	6 cut(s)	18, 123, 402, 1028, 1563, 1578
MaeII	ACGT	8 cut(s)	133, 175, 919, 1539, 1621, 1711, 1866, 2180
MaeIII	GTNAC	6 cut(s)	665, 859, 955, 1076, 1219, 1913
MalI	GATC	4 cut(s)	731, 1026, 1860, 2167
MboI	GATC	4 cut(s)	729, 1024, 1858, 2165
MboII	GAAGA	8 cut(s)	6, 80, 611, 1343, 1862, 2068, 2097, 2188
MflI	RGATCY	2 cut(s)	1024, 1858
MhlI	GDGCHC	2 cut(s)	320, 2133
MlsI	TGGCCA	1 cut(s)	1844
MluCI	AATT	9 cut(s)	25, 94, 168, 265, 411, 1232, 1364, 1569, 1962
MluNI	TGGCCA	1 cut(s)	1844
MlyI	GAGTC	1 cut(s)	2120
MmeI	TCCRAC	2 cut(s)	729, 894
Mox20I	TGGCCA	1 cut(s)	1844
Mph1103I	ATGCAT	2 cut(s)	679, 1092
MroXI	GAANNNNTTC	2 cut(s)	87, 207
MscI	TGGCCA	1 cut(s)	1844
MslI	CAYNNNNRTG	4 cut(s)	882, 1493, 2079, 2120
Msp20I	TGGCCA	1 cut(s)	1844
MspA1I	CMGCKG	1 cut(s)	871
MspCI	CTTAAG	1 cut(s)	1208
MspI	CCGG	3 cut(s)	312, 1424, 2021
MspR9I	CCNGG	2 cut(s)	313, 1425
Mva1269I	GAATGC	1 cut(s)	1173
MvnI	CGCG	2 cut(s)	322, 386
MwoI	GCNNNNNNNGC	3 cut(s)	503, 1466, 1614
NciI	CCSGG	2 cut(s)	313, 1425
NdeI	CATATG	1 cut(s)	673
NdeII	GATC	4 cut(s)	729, 1024, 1858, 2165
NlaIII	CATG	9 cut(s)	182, 794, 1612, 1643, 1675, 1792, 2078, 2084, 2125
NlaIV	GGNNCC	4 cut(s)	317, 423, 1303, 1860
NmuCI	GTSAC	3 cut(s)	859, 1076, 1913
NruI	TCGCGA	1 cut(s)	386
NsbI	TGCGCA	1 cut(s)	2079
NsiI	ATGCAT	2 cut(s)	679, 1092
NspI	RCATGY	2 cut(s)	1612, 2078
NspV	TTCGAA	1 cut(s)	201
PagI	TCATGA	1 cut(s)	178
PaqCI	CACCTGC	1 cut(s)	2077
PceI	AGGCCT	3 cut(s)	1360, 1741, 2014
PcsI	WCGNNNNNNNCGW	4 cut(s)	133, 499, 508, 1627
PctI	GAATGC	1 cut(s)	1173
PdmI	GAANNNNTTC	2 cut(s)	87, 207
PfeI	GAWTC	5 cut(s)	437, 443, 1404, 1785, 1924
PflFI	GACNNNGTC	1 cut(s)	132
PkrI	GCNGC	8 cut(s)	44, 499, 598, 873, 909, 1729, 1939, 1942
PleI	GAGTC	1 cut(s)	2119
PpsI	GAGTC	1 cut(s)	2119
PshAI	GACNNNNGTC	1 cut(s)	2046
Psp124BI	GAGCTC	1 cut(s)	2133
PspEI	GGTNACC	1 cut(s)	665
PspFI	CCCAGC	1 cut(s)	1065
PspN4I	GGNNCC	4 cut(s)	317, 423, 1303, 1860
PspPI	GGNCC	3 cut(s)	338, 1302, 1418
PstI	CTGCAG	2 cut(s)	1942, 2036
PstNI	CAGNNNCTG	1 cut(s)	350
PsuI	RGATCY	2 cut(s)	1024, 1858
PsyI	GACNNNGTC	1 cut(s)	132
PvuII	CAGCTG	1 cut(s)	871
RruI	TCGCGA	1 cut(s)	386
RsaI	GTAC	8 cut(s)	459, 528, 1429, 1538, 1722, 2019, 2030, 2038
RsaNI	GTAC	8 cut(s)	458, 527, 1428, 1537, 1721, 2018, 2029, 2037
RseI	CAYNNNNRTG	4 cut(s)	882, 1493, 2079, 2120
SacI	GAGCTC	1 cut(s)	2133
SalI	GTCGAC	1 cut(s)	135
SatI	GCNGC	8 cut(s)	43, 498, 597, 872, 908, 1728, 1938, 1941
Sau3AI	GATC	4 cut(s)	729, 1024, 1858, 2165
Sau96I	GGNCC	3 cut(s)	338, 1302, 1418
SchI	GAGTC	1 cut(s)	2120
ScrFI	CCNGG	2 cut(s)	313, 1425
SduI	GDGCHC	2 cut(s)	320, 2133
SfaNI	GCATC	4 cut(s)	260, 874, 1332, 1795
SfcI	CTRYAG	2 cut(s)	1938, 2032
SfuI	TTCGAA	1 cut(s)	201
SinI	GGWCC	2 cut(s)	338, 1418
SmiMI	CAYNNNNRTG	4 cut(s)	882, 1493, 2079, 2120
SmlI	CTYRAG	3 cut(s)	521, 590, 1208
SmoI	CTYRAG	3 cut(s)	521, 590, 1208
Sse9I	AATT	9 cut(s)	25, 94, 168, 265, 411, 1232, 1364, 1569, 1962
SseBI	AGGCCT	3 cut(s)	1360, 1741, 2014
SsiI	CCGC	7 cut(s)	9, 320, 428, 596, 1547, 2003, 2163
SspI	AATATT	2 cut(s)	293, 952
SspMI	CTAG	6 cut(s)	18, 123, 402, 1028, 1563, 1578
SstI	GAGCTC	1 cut(s)	2133
StuI	AGGCCT	3 cut(s)	1360, 1741, 2014
StyD4I	CCNGG	2 cut(s)	311, 1423
StyI	CCWWGG	5 cut(s)	369, 432, 461, 775, 1305
TaaI	ACNGT	2 cut(s)	859, 1383
TaiI	ACGT	8 cut(s)	136, 178, 922, 1542, 1624, 1714, 1869, 2183
TaqI	TCGA	4 cut(s)	113, 136, 201, 2137
TasI	AATT	9 cut(s)	25, 94, 168, 265, 411, 1232, 1364, 1569, 1962
TatI	WGTACW	1 cut(s)	2028
TauI	GCSGC	1 cut(s)	599
TfiI	GAWTC	5 cut(s)	437, 443, 1404, 1785, 1924
TscAI	CASTG	1 cut(s)	864
TseFI	GTSAC	3 cut(s)	859, 1076, 1913
TseI	GCWGC	7 cut(s)	42, 497, 871, 907, 1727, 1937, 1940
Tsp45I	GTSAC	3 cut(s)	859, 1076, 1913
TspDTI	ATGAA	5 cut(s)	288, 1245, 1660, 1673, 1777
TspGWI	ACGGA	2 cut(s)	500, 1715
TspRI	CASTG	1 cut(s)	864
Tth111I	GACNNNGTC	1 cut(s)	132
Vha464I	CTTAAG	1 cut(s)	1208
VpaK11BI	GGWCC	2 cut(s)	338, 1418
XagI	CCTNNNNNAGG	2 cut(s)	1398, 1754
XapI	RAATTY	4 cut(s)	168, 265, 1232, 1962
XceI	RCATGY	2 cut(s)	1612, 2078
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1852
XmiI	GTMKAC	2 cut(s)	136, 784
XmnI	GAANNNNTTC	2 cut(s)	87, 207
XspI	CTAG	6 cut(s)	18, 123, 402, 1028, 1563, 1578
ZraI	GACGTC	1 cut(s)	2181
Zsp2I	ATGCAT	2 cut(s)	679, 1092

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.