Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0006487

Physical Location & Seq

Genomic Coordinates Forward (+)

22720741 .. 22729811

Gene Structure 9071 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g22650.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3837 bp

ATGGTTGAAACCAGGCGCAGCTCCTCTTCCAAACGCGCCCTATCGGCCTCCCCTCCTCCCAACCCCAAACGCTCAAAGGCGTCTGATGCTTCGTCGTCGAACAACGGAGTTAGGAGTGGGCCGCCGGCGGAGCCTTTGGGTCCGATTAAGGAATCTGGGTCCCAATCACCGGAACTTGAGCTCCGACCCTCTGATCCGCCGACCACTGATTCGTTGAAGGCAAGTAACGGCTCTGATGCCACCGCGCTGGAGAGATCCCCCGATGCCGTACCGGAAGGCGAGGCCTTGGTTTCGCCGCAGCCTTTGGGGGAAACTGCAGTCCGTGCGGGTTTGAAGCGGGCTAAGAAGCTTCCAAAGAAGACTGCAAAGTCGAATTCGAAATCTGCTTGGGGAATGCTTATTTCGCAGTGCTCAAGGAACCCGCACCTGTTCATTTGTGACACTGTTTTCACTGTTGGTCAAAGTCGTGAGTGCCATTTATGTATTAAAGACCCATCCATTAGTACTACTTTGTGTAAACTGAAACATGTTAAGCGTGAAGGTTTGTCCACTGCAGAACTAGAAATTATAGGCGGTGACAGTGATGTTCAGGTGAATGAGAAGACTTATCAAAAGGATACGAAGGTAATTCTTAATGGAGGTGATGAGGTTGTATTCAGCTCGTCTGGAAGACATGCATATATTTTCCAGCCGCTGACAAATGACAATAATATAGCTGCTCAGGGCATTCCTTCAATTAGCATTATAGAAACCCAGAATGCTCCAGTTAATGGGATGCATATGGAGGCAAGATCAGGGGACCCCTCTGCTGTTGATGGGGCATCAATATTAGCGTCAATGTCAAATGTGCCAAATGACTTGTCACTACTTCCAGAACCTGCTAAAGCTGGTGACGAGCTGCAACAAGATGCAGAGATGACTTCTCTTCCTTCTGCCAGTCGAGGTTCAGATGACTGTACTCCAGACATTGTGATGAAGGAGAGTACTAATGTTAATGATCAGGTTTCAGGTGATAAAGATATTGTTCAGTACCCTGACACTGCGAAAGAAAACCCCAATCTTGATAGTGTTGCATTGGATATGAATATTGAAACCAGGAAGGTCTCTGGGGCAACTCATGAACTAAGGCCACTCCTCCGTATGTTTGGCGGTTCTTCTAGTACCGATTTTGACTTAACTGGCAGCATTTCTAAAATACTTGACGAGCAAAGGGAAATCGGAGAGCTTCTCCACAATCTTGACCCTCCAATGTTGATATCAACTAGGCGACAAGCATTTAAAGAAAAACTACAACAAGGAATTCTAAGTCCTGATGATATTGATGTCTCCTTTGAAAGTTTCCCATATTACCTAAGTGAAACAACAAAGAAGGTTTTGATTGCATCCACCCACCCAAATTTGAAATGTAGTAAGTTTGGAAAGTACTTTTCATCACTACCTACTGGGAGCCCGCGCATATTATTATCTGGTCCAGCAGGTTCTGAGATATATCAGGAGACCTTGGCAAAGGCACTTGCGAAACATTTTGGTGCTAGATTACTAATTGTAGATTCTCTTCTCCTGCCTGGTGTTCAGGCACCACCGCCCAAGGATTCTGATTCTGTTAAAGAAGTACCAAGGCCTGAAAGAGTTTCCATTTTAGCGAAACGAGCAGCTCATGCTGCTGGGTTCAAGCACAAGAAACCAACCTCTAGTGTTGAGGCTGAAATTACTGGTGGATCCACTGTGAGTTCTCAGGCACTGCCAAAGCAGGAGACTTCTACTGCATCATCCAGAGGCATTACATTTAAACAAGGTGACAAGGTCAAATTTGTGGGTGCCATATCTTCTGGTCCTCTGCAGTTGCAGAGTTGTCCTCTTCTAAGGAAGGGGGACCATCATATGGTTGTCGAGGCAAAGTTGTTCTTGCTTTTGAAGAAAATGAGGCTGCAAAAATTGGGGTTAGATTTGATAAATCAATACCAGATGGCAATCGATCTTGGTGGTCTATGTGAAGAAGATCGTGGCTTTTTTTGTTCTGCTAGTCATTTACTTCCCTTGGATGTTTCTGGAGGTGATGATATTGACAAGCTTGCTATTGGTGAACTTCTTGAGGTGGCATCCCATGAGAGTAAAAGTCTTCCCTTGATAGTGTTTTTGAAAGATATAGAAAAGGTTATGGCAGGTAACCCAGATGCATATAGTGTCTTGAAGTGTAAGCTTGAAAACTTGCCAGAGAATGTTGTTGTGATTGGCTCTCATACCCAGTTGGACACTCGCAAGGAGAAGTCCCATCCTGGTAGCCTTTTGTTCACGAAATTCGGCTTCAACCAAACGGCTTTGCTTGATCTTGCTTTTCCGGATAACCTTGGTGGTAGGCTGCATGATAGGAGCAAAGAAACTCCTAAAACTATGAAGCAACTCTCTCGGATTTTCCCCAACAAAGTGACCATACAGCTGCCCCAGGATGAAACTTTACTTTCGGACTGGAAGCAGCAGTTGGAGCGTGATGTTGAAACTTTGAAAGCCCAGTCAAATATTGTTACCATACGCTCAGTTCTTAACCGAGTTGCTGTGGATTGCCCTGACCTTGAAAGTGTTGAGAAAGTAGTAGGCTGGGCTATTAGTCACCATCTTATGCATTGTTCGGACGCTTTAGTTAAAGATGACAAACTTGTTATTTCTACTGAAAGCCTTAAGGATGGACTAAACATTCTACAGGGCGTTCAAAATGAAAACAAGAGCATAAAGAAATCACTTAAGGATGTGGTTACCGGAAACGAATTTGAGAAAAAACTTCTTGTTGATGTTATTCCACCGAGCGATATTGGGGTTAGTTTTGATGACATCGGGGCCTTGGAAAATGTGAAGGACACCCTAAAGGAGTTGGTGATGCTTCCTCTTCAGAGGCCTGAATTGTTTAGCAAAGGACAGTTGACTAAGCCTTGCAAAGGAATCTTGCTATTTGGTCCTCCGGGTACTGGAAAAACTATGCTTGCAAAGGCTGTTGCAACTGAAGCTGGTGCAAACTTTATTAACATATCAATGTCAAGTATTACTTCAAAGTGGTTTGGGGAAGGAGAGAAGTACGTTAAAGCAGTGTTCTCCTTAGCTAGTAAAATTGCCCCTAGCGTCATTTTTGTTGATGAGGTTGACAGCATGTTAGGAAGACGTGAAAATCCTGGGGAACATGAAGCTATGCGTAAAATGAAAAATGAGTTCATGGTGAACTGGGATGGTTTGCGTACAAAGGATAAAGAACGTGTATTGGTACTTGCTGCTACTAATAGGCCTTTTGACCTTGATGAGGCCGTTATTAGGCGGCTTCCAAGGAGACTGATGGTGAACTTGCCAGATGCCCAGAACAGAGAGAAAATACTGAGAGTTATATTAGCCAAAGAAGATTTGGAACCTGACGTTGATTTGGAAGCAGTTGCAAATCTTACGGATGGGTATTCAGGAAGTGACTTAAAGAATCTGTGTGTTGCTGCAGCTCACCTCCCCATTAGGGAAATTTTAGAGAAAGAGAAAAAGGAGAGAAGTTTAGCTTTGGCGGAGAACAGACCTGTACCCGAGTTGTACTGTAGTACCGACATTCGTCCTTTGAAGATGGAGGACTTTAAACATGCACATGAGCAGGTACCTTGCGATCTACTATTACTATTTGTTGTAGTATCCTGTGGTGGTCGGAAGCGTTCAGTTGTGTTTCAGGGCTTTACCGGTCTAATATCGAACTCAATGCAGGTATGTGCAAGTGTGTCATCAGAGTCGACAAATATGAACGAGCTCCTCCAATGGAATGACCTATATGGCGAAGGTGGATCAAGAAAGAAGACGTCTCTCAGTTATTTTATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002090 GO:0002092 GO:0003008 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0007610 GO:0007611 GO:0007612 GO:0007613 GO:0008150 GO:0009893 GO:0010604 GO:0010646 GO:0010648 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0023051 GO:0023057 GO:0030100 GO:0031323 GO:0031325 GO:0032501 GO:0032879 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044456 GO:0044459 GO:0044464 GO:0045202 GO:0045211 GO:0045807 GO:0048259 GO:0048260 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0050804 GO:0050805 GO:0050877 GO:0050890 GO:0051049 GO:0051050 GO:0051128 GO:0051130 GO:0051966 GO:0051967 GO:0060255 GO:0060627 GO:0065007 GO:0071944 GO:0097060 GO:0098590 GO:0098794 GO:0099177

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FHA

Protein Analysis

1279

Amino Acids

139.46

Weight (kDa)

6.27

Isoelectric Point (pI)

43.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006487)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02890 AT1G02890 AT4G02480
fragaria_vesca	FvH4_2g25490 FvH4_2g25490 FvH4_2g25490
malus_domestica	MD03G1285800.v1.1 MD11G1305200.v1.1 MD11G1305300.v1.1 MD11G1305400.v1.1
prunus_persica	Prupe.8G259000_v2.0.a1 Prupe.8G259000_v2.0.a1 Prupe.8G259000_v2.0.a1 Prupe.8G259000_v2.0.a1
pyrus_communis	pycom03g22650 pycom11g26700 pycom11g26720
rosa_chinensis	RchiOBHm_Chr6g0293701
rosa_laevigata	RLG00000011931
rosa_roxburghii	Rroxscaffold_7G00173960
rosa_rugosa	Rorug06G0237500
rosa_samantha	Rh6AG350200 Rh6BG357700 Rh6CG364500 Rh6DG351400
rosa_wichuraiana	Rw6G030490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	367
AatII	GACGTC	1 cut(s)	3818
Acc36I	ACCTGC	5 cut(s)	886, 1466, 2153, 3607, 3712
Acc65I	GGTACC	1 cut(s)	3619
AccB1I	GGYRCC	3 cut(s)	1576, 1817, 3619
AccB7I	CCANNNNNTGG	2 cut(s)	770, 1882
AccI	GTMKAC	1 cut(s)	3749
AccII	CGCG	3 cut(s)	36, 245, 1453
AccIII	TCCGGA	1 cut(s)	2338
AclWI	GGATC	5 cut(s)	188, 249, 1713, 1726, 3808
AcsI	RAATTY	7 cut(s)	373, 1299, 1396, 1808, 2297, 2762, 3492
AcuI	CTGAAG	2 cut(s)	2867, 3015
AcyI	GRCGYC	2 cut(s)	80, 3815
AfiI	CCNNNNNNNGG	8 cut(s)	169, 770, 1882, 2930, 2960, 3286, 3297, 3487
AflII	CTTAAG	2 cut(s)	2675, 2738
AflIII	ACRYGT	2 cut(s)	526, 3241
AgeI	ACCGGT	1 cut(s)	3698
AjiI	CACGTC	1 cut(s)	3152
AjnI	CCWGG	6 cut(s)	11, 1094, 1564, 2275, 2442, 3160
AjuI	GAANNNNNNNTTGG	2 cut(s)	2462, 2494
AloI	GAACNNNNNNTCC	2 cut(s)	165, 197
Alw21I	GWGCWC	3 cut(s)	183, 413, 3768
Alw26I	GTCTC	6 cut(s)	1108, 1330, 1490, 1748, 3307, 3822
AlwI	GGATC	5 cut(s)	188, 249, 1713, 1726, 3808
AlwNI	CAGNNNCTG	4 cut(s)	694, 878, 1481, 1741
Ama87I	CYCGRG	1 cut(s)	3551
Aor13HI	TCCGGA	1 cut(s)	2338
AoxI	GGCC	9 cut(s)	45, 119, 282, 1127, 1619, 2832, 2888, 3269, 3288
ApoI	RAATTY	7 cut(s)	373, 1299, 1396, 1808, 2297, 2762, 3492
ArsI	GACNNNNNNTTYG	4 cut(s)	193, 225, 845, 877
AsiGI	ACCGGT	1 cut(s)	3698
Asp718I	GGTACC	1 cut(s)	3619
AspLEI	GCGC	4 cut(s)	18, 38, 247, 1455
AspS9I	GGNCC	9 cut(s)	119, 140, 159, 799, 1469, 1832, 1873, 2832, 2948
AsuC2I	CCSGG	1 cut(s)	2955
AsuII	TTCGAA	1 cut(s)	377
AvaI	CYCGRG	1 cut(s)	3551
AvaII	GGWCC	7 cut(s)	140, 159, 799, 1469, 1832, 1873, 2948
BaeI	ACNNNNGTAYC	4 cut(s)	609, 642, 3550, 3583
BamHI	GGATCC	1 cut(s)	1718
BanI	GGYRCC	3 cut(s)	1576, 1817, 3619
BanII	GRGCYC	3 cut(s)	183, 1451, 3768
BarI	GAAGNNNNNNTAC	2 cut(s)	1539, 1571
BbsI	GAAGAC	6 cut(s)	365, 608, 676, 2111, 3154, 3818
Bbv12I	GWGCWC	3 cut(s)	183, 413, 3768
BceAI	ACGGC	4 cut(s)	244, 251, 2331, 3275
BcgI	CGANNNNNNTGC	4 cut(s)	2387, 2421, 3700, 3734
BciT130I	CCWGG	6 cut(s)	13, 1096, 1566, 2277, 2444, 3162
BciVI	GTATCC	2 cut(s)	610, 3664
BclI	TGATCA	1 cut(s)	997
BcnI	CCSGG	1 cut(s)	2955
BcoDI	GTCTC	6 cut(s)	1108, 1330, 1490, 1748, 3307, 3822
BfaI	CTAG	8 cut(s)	560, 1158, 1263, 1533, 1692, 2022, 3093, 3108
BfmI	CTRYAG	6 cut(s)	315, 552, 1838, 2696, 3468, 3562
BfrI	CTTAAG	2 cut(s)	2675, 2738
BfuAI	ACCTGC	5 cut(s)	886, 1466, 2153, 3607, 3712
BfuI	GTATCC	2 cut(s)	610, 3664
BglI	GCCNNNNNGGC	1 cut(s)	44
BmcAI	AGTACT	3 cut(s)	505, 985, 1424
Bme1390I	CCNGG	7 cut(s)	13, 1096, 1566, 2277, 2444, 2955, 3162
Bme18I	GGWCC	7 cut(s)	140, 159, 799, 1469, 1832, 1873, 2948
BmeT110I	CYCGRG	1 cut(s)	3551
BmgBI	CACGTC	1 cut(s)	3152
BmgT120I	GGNCC	9 cut(s)	119, 140, 159, 799, 1469, 1832, 1873, 2832, 2948
BmrFI	CCNGG	7 cut(s)	13, 1096, 1566, 2277, 2444, 2955, 3162
BmrI	ACTGGG	4 cut(s)	1452, 2239, 2503, 3220
BmuI	ACTGGG	4 cut(s)	1452, 2239, 2503, 3220
BoxI	GACNNNNGTC	1 cut(s)	3576
BpiI	GAAGAC	6 cut(s)	365, 608, 676, 2111, 3154, 3818
BplI	GAGNNNNNCTC	4 cut(s)	1212, 1244, 1840, 1872
BpmI	CTGGAG	4 cut(s)	269, 747, 945, 2070
Bpu10I	CCTNAGC	2 cut(s)	720, 3088
Bpu14I	TTCGAA	1 cut(s)	377
BpuEI	CTTGAG	3 cut(s)	197, 397, 2111
BpuMI	CCSGG	1 cut(s)	2955
Bsa29I	ATCGAT	1 cut(s)	1974
BsaBI	GATNNNNATC	1 cut(s)	1970
BsaHI	GRCGYC	2 cut(s)	80, 3815
BsaI	GGTCTC	2 cut(s)	1108, 1490
BsaWI	WCCGGW	5 cut(s)	169, 271, 2338, 2753, 3698
BsaXI	ACNNNNNCTCC	2 cut(s)	165, 195
Bsc4I	CCNNNNNNNGG	8 cut(s)	169, 770, 1882, 2930, 2960, 3286, 3297, 3487
Bse118I	RCCGGY	2 cut(s)	124, 3698
Bse8I	GATNNNNATC	1 cut(s)	1970
BseAI	TCCGGA	1 cut(s)	2338
BseBI	CCWGG	6 cut(s)	13, 1096, 1566, 2277, 2444, 3162
BseCI	ATCGAT	1 cut(s)	1974
BseJI	GATNNNNATC	1 cut(s)	1970
BseLI	CCNNNNNNNGG	8 cut(s)	169, 770, 1882, 2930, 2960, 3286, 3297, 3487
BseMII	CTCAG	6 cut(s)	734, 1473, 1748, 2547, 3350, 3835
BseRI	GAGGAG	4 cut(s)	13, 45, 1124, 3758
BseYI	CCCAGC	2 cut(s)	1664, 2595
Bsh1236I	CGCG	3 cut(s)	36, 245, 1453
BshFI	GGCC	9 cut(s)	47, 121, 284, 1129, 1621, 2834, 2890, 3271, 3290
BshNI	GGYRCC	3 cut(s)	1576, 1817, 3619
BshTI	ACCGGT	1 cut(s)	3698
BshVI	ATCGAT	1 cut(s)	1974
BsiHKAI	GWGCWC	3 cut(s)	183, 413, 3768
BsiHKCI	CYCGRG	1 cut(s)	3551
BsiSI	CCGG	7 cut(s)	125, 170, 272, 2339, 2754, 2954, 3699
BslFI	GGGAC	4 cut(s)	145, 812, 1886, 2254
BslI	CCNNNNNNNGG	8 cut(s)	169, 770, 1882, 2930, 2960, 3286, 3297, 3487
BsmAI	GTCTC	6 cut(s)	1108, 1330, 1490, 1748, 3307, 3822
BsmBI	CGTCTC	1 cut(s)	3822
BsmFI	GGGAC	4 cut(s)	145, 812, 1886, 2254
BsmI	GAATGC	3 cut(s)	399, 726, 763
BsnI	GGCC	9 cut(s)	47, 121, 284, 1129, 1621, 2834, 2890, 3271, 3290
Bso31I	GGTCTC	2 cut(s)	1108, 1490
BsoBI	CYCGRG	1 cut(s)	3551
Bsp119I	TTCGAA	1 cut(s)	377
Bsp1286I	GDGCHC	4 cut(s)	183, 413, 1451, 3768
Bsp13I	TCCGGA	1 cut(s)	2338
BspANI	GGCC	9 cut(s)	47, 121, 284, 1129, 1621, 2834, 2890, 3271, 3290
BspCNI	CTCAG	6 cut(s)	733, 1474, 1747, 2546, 3351, 3834
BspDI	ATCGAT	1 cut(s)	1974
BspEI	TCCGGA	1 cut(s)	2338
BspFNI	CGCG	3 cut(s)	36, 245, 1453
BspHI	TCATGA	1 cut(s)	1117
BspMAI	CTGCAG	4 cut(s)	319, 556, 1842, 3472
BspMI	ACCTGC	5 cut(s)	886, 1466, 2153, 3607, 3712
BspPI	GGATC	5 cut(s)	188, 249, 1713, 1726, 3808
BspT104I	TTCGAA	1 cut(s)	377
BspT107I	GGYRCC	3 cut(s)	1576, 1817, 3619
BspTI	CTTAAG	2 cut(s)	2675, 2738
BspTNI	GGTCTC	2 cut(s)	1108, 1490
BsrFI	RCCGGY	2 cut(s)	124, 3698
BssAI	RCCGGY	2 cut(s)	124, 3698
BssNI	GRCGYC	2 cut(s)	80, 3815
BssT1I	CCWWGG	8 cut(s)	285, 1500, 1587, 1616, 2037, 2347, 2835, 3308
Bst2UI	CCWGG	6 cut(s)	13, 1096, 1566, 2277, 2444, 3162
Bst4CI	ACNGT	7 cut(s)	445, 454, 581, 956, 1726, 2913, 3563
Bst6I	CTCTTC	5 cut(s)	31, 930, 1560, 1863, 2886
BstACI	GRCGYC	2 cut(s)	80, 3815
BstAFI	CTTAAG	2 cut(s)	2675, 2738
BstAPI	GCANNNNNTGC	2 cut(s)	323, 1658
BstBI	TTCGAA	1 cut(s)	377
BstC8I	GCNNGC	5 cut(s)	126, 339, 1451, 2073, 2976
BstEII	GGTNACC	2 cut(s)	2165, 2749
BstENI	CCTNNNNNAGG	2 cut(s)	2928, 3284
BstFNI	CGCG	3 cut(s)	36, 245, 1453
BstHHI	GCGC	4 cut(s)	18, 38, 247, 1455
BstMAI	GTCTC	6 cut(s)	1108, 1330, 1490, 1748, 3307, 3822
BstNI	CCWGG	6 cut(s)	13, 1096, 1566, 2277, 2444, 3162
BstNSI	RCATGY	4 cut(s)	530, 677, 3142, 3608
BstPAI	GACNNNNGTC	1 cut(s)	3576
BstPI	GGTNACC	2 cut(s)	2165, 2749
BstSCI	CCNGG	7 cut(s)	11, 1094, 1564, 2275, 2442, 2953, 3160
BstSFI	CTRYAG	6 cut(s)	315, 552, 1838, 2696, 3468, 3562
BstUI	CGCG	3 cut(s)	36, 245, 1453
BstV2I	GAAGAC	6 cut(s)	365, 608, 676, 2111, 3154, 3818
BstX2I	RGATCY	2 cut(s)	254, 1718
BstXI	CCANNNNNNTGG	1 cut(s)	247
BstYI	RGATCY	2 cut(s)	254, 1718
Bsu15I	ATCGAT	1 cut(s)	1974
BsuI	GTATCC	2 cut(s)	610, 3664
BsuRI	GGCC	9 cut(s)	47, 121, 284, 1129, 1621, 2834, 2890, 3271, 3290
BsuTUI	ATCGAT	1 cut(s)	1974
BtrI	CACGTC	1 cut(s)	3152
BtsI	GCAGTG	5 cut(s)	413, 549, 1038, 1739, 3084
BveI	ACCTGC	5 cut(s)	886, 1466, 2153, 3607, 3712
Cac8I	GCNNGC	5 cut(s)	126, 339, 1451, 2073, 2976
CaiI	CAGNNNCTG	4 cut(s)	694, 878, 1481, 1741
CciI	TCATGA	1 cut(s)	1117
CfoI	GCGC	4 cut(s)	18, 38, 247, 1455
Cfr10I	RCCGGY	2 cut(s)	124, 3698
Cfr13I	GGNCC	9 cut(s)	119, 140, 159, 799, 1469, 1832, 1873, 2832, 2948
ClaI	ATCGAT	1 cut(s)	1974
CseI	GACGC	4 cut(s)	69, 822, 2639, 3100
CspAI	ACCGGT	1 cut(s)	3698
DraI	TTTAAA	3 cut(s)	1279, 1789, 3601
DrdI	GACNNNNNNGTC	1 cut(s)	367
DseDI	GACNNNNNNGTC	1 cut(s)	367
Eam1104I	CTCTTC	5 cut(s)	31, 930, 1560, 1863, 2886
EarI	CTCTTC	5 cut(s)	31, 930, 1560, 1863, 2886
EciI	GGCGGA	3 cut(s)	143, 186, 3548
Ecl136II	GAGCTC	2 cut(s)	181, 3766
Eco130I	CCWWGG	8 cut(s)	285, 1500, 1587, 1616, 2037, 2347, 2835, 3308
Eco147I	AGGCCT	4 cut(s)	284, 1621, 2890, 3271
Eco24I	GRGCYC	3 cut(s)	183, 1451, 3768
Eco31I	GGTCTC	2 cut(s)	1108, 1490
Eco32I	GATATC	1 cut(s)	1257
Eco47I	GGWCC	7 cut(s)	140, 159, 799, 1469, 1832, 1873, 2948
Eco53kI	GAGCTC	2 cut(s)	181, 3766
Eco57I	CTGAAG	2 cut(s)	2867, 3015
Eco88I	CYCGRG	1 cut(s)	3551
Eco91I	GGTNACC	2 cut(s)	2165, 2749
EcoICRI	GAGCTC	2 cut(s)	181, 3766
EcoNI	CCTNNNNNAGG	2 cut(s)	2928, 3284
EcoO109I	RGGNCCY	3 cut(s)	159, 799, 2832
EcoO65I	GGTNACC	2 cut(s)	2165, 2749
EcoRI	GAATTC	2 cut(s)	373, 1299
EcoRII	CCWGG	6 cut(s)	11, 1094, 1564, 2275, 2442, 3160
EcoRV	GATATC	1 cut(s)	1257
EcoT14I	CCWWGG	8 cut(s)	285, 1500, 1587, 1616, 2037, 2347, 2835, 3308
EcoT22I	ATGCAT	4 cut(s)	679, 780, 2179, 2622
EcoT38I	GRGCYC	3 cut(s)	183, 1451, 3768
ErhI	CCWWGG	8 cut(s)	285, 1500, 1587, 1616, 2037, 2347, 2835, 3308
Esp3I	CGTCTC	1 cut(s)	3822
FalI	AAGNNNNNCTT	6 cut(s)	1889, 1921, 3022, 3054, 3511, 3543
FaqI	GGGAC	4 cut(s)	145, 812, 1886, 2254
FauI	CCCGC	4 cut(s)	319, 330, 429, 1458
FauNDI	CATATG	2 cut(s)	780, 1881
FbaI	TGATCA	1 cut(s)	997
FblI	GTMKAC	1 cut(s)	3749
FriOI	GRGCYC	3 cut(s)	183, 1451, 3768
FspBI	CTAG	8 cut(s)	560, 1158, 1263, 1533, 1692, 2022, 3093, 3108
GlaI	GCGC	4 cut(s)	17, 37, 246, 1454
GsaI	CCCAGC	2 cut(s)	1668, 2599
GsuI	CTGGAG	4 cut(s)	269, 747, 945, 2070
HaeIII	GGCC	9 cut(s)	47, 121, 284, 1129, 1621, 2834, 2890, 3271, 3290
HapII	CCGG	7 cut(s)	125, 170, 272, 2339, 2754, 2954, 3699
HgaI	GACGC	4 cut(s)	69, 822, 2639, 3100
HhaI	GCGC	4 cut(s)	18, 38, 247, 1455
Hin1I	GRCGYC	2 cut(s)	80, 3815
Hin6I	GCGC	4 cut(s)	16, 36, 245, 1453
HinP1I	GCGC	4 cut(s)	16, 36, 245, 1453
HincII	GTYRAC	3 cut(s)	2916, 3133, 3750
HindII	GTYRAC	3 cut(s)	2916, 3133, 3750
HindIII	AAGCTT	3 cut(s)	347, 2069, 2198
HinfI	GANTC	8 cut(s)	152, 209, 1550, 1592, 1598, 2934, 3454, 3746
HpaII	CCGG	7 cut(s)	125, 170, 272, 2339, 2754, 2954, 3699
Hpy166II	GTNNAC	9 cut(s)	518, 549, 2084, 2292, 2916, 3133, 3208, 3325, 3750
Hpy8I	GTNNAC	9 cut(s)	518, 549, 2084, 2292, 2916, 3133, 3208, 3325, 3750
Hpy99I	CGWCG	2 cut(s)	97, 100
HpyCH4III	ACNGT	7 cut(s)	445, 454, 581, 956, 1726, 2913, 3563
HpyCH4IV	ACGT	5 cut(s)	3069, 3151, 3241, 3396, 3815
HpySE526I	ACGT	5 cut(s)	3069, 3151, 3241, 3396, 3815
Hsp92I	GRCGYC	2 cut(s)	80, 3815
HspAI	GCGC	4 cut(s)	16, 36, 245, 1453
KflI	GGGWCCC	2 cut(s)	159, 799
Kpn2I	TCCGGA	1 cut(s)	2338
KpnI	GGTACC	1 cut(s)	3623
KroI	GCCGGC	1 cut(s)	124
KroNI	GCCGGC	1 cut(s)	126
Ksp22I	TGATCA	1 cut(s)	997
LmnI	GCTCC	8 cut(s)	26, 130, 186, 766, 1446, 2370, 2482, 3771
MaeI	CTAG	8 cut(s)	560, 1158, 1263, 1533, 1692, 2022, 3093, 3108
MaeII	ACGT	5 cut(s)	3069, 3151, 3241, 3396, 3815
MflI	RGATCY	2 cut(s)	254, 1718
MhlI	GDGCHC	4 cut(s)	183, 413, 1451, 3768
MlyI	GAGTC	1 cut(s)	3755
MmeI	TCCRAC	4 cut(s)	208, 2229, 2460, 3647
Mph1103I	ATGCAT	4 cut(s)	679, 780, 2179, 2622
MreI	CGCCGGCG	1 cut(s)	124
MroI	TCCGGA	1 cut(s)	2338
MroNI	GCCGGC	1 cut(s)	124
MslI	CAYNNNNRTG	4 cut(s)	971, 1527, 3023, 3609
MspA1I	CMGCKG	2 cut(s)	694, 2437
MspCI	CTTAAG	2 cut(s)	2675, 2738
MspI	CCGG	7 cut(s)	125, 170, 272, 2339, 2754, 2954, 3699
MspR9I	CCNGG	7 cut(s)	13, 1096, 1566, 2277, 2444, 2955, 3162
Mva1269I	GAATGC	3 cut(s)	399, 726, 763
MvaI	CCWGG	6 cut(s)	13, 1096, 1566, 2277, 2444, 3162
MvnI	CGCG	3 cut(s)	36, 245, 1453
NaeI	GCCGGC	1 cut(s)	126
NciI	CCSGG	1 cut(s)	2955
NdeI	CATATG	2 cut(s)	780, 1881
NgoMIV	GCCGGC	1 cut(s)	124
NmuCI	GTSAC	8 cut(s)	437, 575, 861, 890, 1796, 2425, 2606, 3443
NsiI	ATGCAT	4 cut(s)	679, 780, 2179, 2622
NspI	RCATGY	4 cut(s)	530, 677, 3142, 3608
NspV	TTCGAA	1 cut(s)	377
PagI	TCATGA	1 cut(s)	1117
PceI	AGGCCT	4 cut(s)	284, 1621, 2890, 3271
PciI	ACATGT	1 cut(s)	526
PctI	GAATGC	3 cut(s)	399, 726, 763
PdiI	GCCGGC	1 cut(s)	126
PfeI	GAWTC	7 cut(s)	152, 209, 1550, 1592, 1598, 2934, 3454
PflFI	GACNNNGTC	1 cut(s)	1802
PflMI	CCANNNNNTGG	2 cut(s)	770, 1882
PinAI	ACCGGT	1 cut(s)	3698
PleI	GAGTC	1 cut(s)	3754
PpsI	GAGTC	1 cut(s)	3754
PpuMI	RGGWCCY	2 cut(s)	159, 799
PscI	ACATGT	1 cut(s)	526
PshAI	GACNNNNGTC	1 cut(s)	3576
Psp124BI	GAGCTC	2 cut(s)	183, 3768
Psp5II	RGGWCCY	2 cut(s)	159, 799
Psp6I	CCWGG	6 cut(s)	11, 1094, 1564, 2275, 2442, 3160
PspEI	GGTNACC	2 cut(s)	2165, 2749
PspFI	CCCAGC	2 cut(s)	1664, 2595
PspGI	CCWGG	6 cut(s)	11, 1094, 1564, 2275, 2442, 3160
PspPI	GGNCC	9 cut(s)	119, 140, 159, 799, 1469, 1832, 1873, 2832, 2948
PspPPI	RGGWCCY	2 cut(s)	159, 799
PstI	CTGCAG	4 cut(s)	319, 556, 1842, 3472
PstNI	CAGNNNCTG	4 cut(s)	694, 878, 1481, 1741
PsuI	RGATCY	2 cut(s)	254, 1718
PsyI	GACNNNGTC	1 cut(s)	1802
PvuII	CAGCTG	1 cut(s)	2437
RseI	CAYNNNNRTG	4 cut(s)	971, 1527, 3023, 3609
SacI	GAGCTC	2 cut(s)	183, 3768
SalI	GTCGAC	1 cut(s)	3748
Sau96I	GGNCC	9 cut(s)	119, 140, 159, 799, 1469, 1832, 1873, 2832, 2948
ScaI	AGTACT	3 cut(s)	505, 985, 1424
SchI	GAGTC	1 cut(s)	3755
ScrFI	CCNGG	7 cut(s)	13, 1096, 1566, 2277, 2444, 2955, 3162
SduI	GDGCHC	4 cut(s)	183, 413, 1451, 3768
SfcI	CTRYAG	6 cut(s)	315, 552, 1838, 2696, 3468, 3562
SfuI	TTCGAA	1 cut(s)	377
SgrAI	CRCCGGYG	1 cut(s)	124
SinI	GGWCC	7 cut(s)	140, 159, 799, 1469, 1832, 1873, 2948
SmiMI	CAYNNNNRTG	4 cut(s)	971, 1527, 3023, 3609
SmlI	CTYRAG	5 cut(s)	176, 412, 2090, 2675, 2738
SmoI	CTYRAG	5 cut(s)	176, 412, 2090, 2675, 2738
SseBI	AGGCCT	4 cut(s)	284, 1621, 2890, 3271
SspI	AATATT	3 cut(s)	828, 1087, 2518
SspMI	CTAG	8 cut(s)	560, 1158, 1263, 1533, 1692, 2022, 3093, 3108
SstI	GAGCTC	2 cut(s)	183, 3768
StuI	AGGCCT	4 cut(s)	284, 1621, 2890, 3271
StyD4I	CCNGG	7 cut(s)	11, 1094, 1564, 2275, 2442, 2953, 3160
StyI	CCWWGG	8 cut(s)	285, 1500, 1587, 1616, 2037, 2347, 2835, 3308
TaaI	ACNGT	7 cut(s)	445, 454, 581, 956, 1726, 2913, 3563
TaiI	ACGT	5 cut(s)	3072, 3154, 3244, 3399, 3818
TaqI	TCGA	8 cut(s)	98, 371, 377, 940, 1890, 1974, 3710, 3749
TatI	WGTACW	5 cut(s)	503, 956, 983, 1422, 3558
TauI	GCSGC	4 cut(s)	124, 298, 694, 3304
TfiI	GAWTC	7 cut(s)	152, 209, 1550, 1592, 1598, 2934, 3454
TseFI	GTSAC	8 cut(s)	437, 575, 861, 890, 1796, 2425, 2606, 3443
Tsp45I	GTSAC	8 cut(s)	437, 575, 861, 890, 1796, 2425, 2606, 3443
TspGWI	ACGGA	4 cut(s)	120, 311, 1127, 3440
Tth111I	GACNNNGTC	1 cut(s)	1802
Van91I	CCANNNNNTGG	2 cut(s)	770, 1882
Vha464I	CTTAAG	2 cut(s)	2675, 2738
VpaK11BI	GGWCC	7 cut(s)	140, 159, 799, 1469, 1832, 1873, 2948
XagI	CCTNNNNNAGG	2 cut(s)	2928, 3284
XapI	RAATTY	7 cut(s)	373, 1299, 1396, 1808, 2297, 2762, 3492
XceI	RCATGY	4 cut(s)	530, 677, 3142, 3608
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3382
XmiI	GTMKAC	1 cut(s)	3749
XspI	CTAG	8 cut(s)	560, 1158, 1263, 1533, 1692, 2022, 3093, 3108
ZraI	GACGTC	1 cut(s)	3816
ZrmI	AGTACT	3 cut(s)	505, 985, 1424
Zsp2I	ATGCAT	4 cut(s)	679, 780, 2179, 2622

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.