Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013894

Physical Location & Seq

Genomic Coordinates Reverse (-)

5163220 .. 5167192

Gene Structure 3973 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G08170.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 798 bp

ATGTACTGGCAGCAAATTGGAAAAGAATGGCGTCGAATTCTCGAGGAATTTAGGCTAGCACATCCAGATGTCACAGTTCTTGATCCTCCAGATGCAATACTACATCTCCGTAATCGTCAGTCAATGCTTCAGTGTGTTGCGGACATGAATCTGTCTGATAGTAATGGACGCGTTGGTGTGCCCAAGCAATTGGTAATTAAAAAGGATGCATCTTCAATTCCGGAGGCTGTCAATAATGCTGGTCTGAGACTACCTCTTGTTGCAAAGCCATTGGTTGCTGATGGAAGTGCAAAGTCACATGAGCTTTCGCTGGCTTACGATCAACACTCCCTTCTGAAGCTCGAGCCTCCTCTTGTTCTTCAGGAGTTTGTTAACCATGGAGGTGTTCTTTTCAAGGTTTACATTGTTGGGGAGGCTATTAGAGTTGTCCGGCGCTTCTCCCTACCTGATGTCTCTAGACGAGAACTCCCCAAATCAGCTGGTGTATTCCGCTTCCCACGGGTCTCTTGTGCTGCAGCTTCAGCTGATGATGCAGATCTGGACCCGAGCATTGCCGAGCTTCCACCACGTCCTCTGTTGGAGAGACTGGCAAAGGAACTCCGTCGTGGATTGGGTCTAAGGCTGTTCAATTTAGACATAATTAGAGAGCACGGGACAAGAGATCGGTTTTATGTGATCGACATCAACTATTTCCCAGGGTACGGGAAAATGCCAGAGTATGAGCATGTATTCACTGATTTCTTACTGAGTGTGGTACAAAGCCAATGTAAGAAACGAGCTTTGGCAGATCAATACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006793 GO:0006796 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009611 GO:0009791 GO:0009987 GO:0010154 GO:0010214 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0022414 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044464 GO:0047325 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051765 GO:0051766 GO:0052725 GO:0052726 GO:0061458

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Ins134_P3_kin

Protein Analysis

265

Amino Acids

29.99

Weight (kDa)

8.7

Isoelectric Point (pI)

41.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ins134_P3_kin	PF05770	12 - 208	7.8e-100	Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013894)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08170 AT4G08170
fragaria_vesca	FvH4_5g33450 FvH4_5g33450
malus_domestica	MD08G1211500.v1.1
prunus_persica	Prupe.1G543400_v2.0.a1 Prupe.1G543400_v2.0.a1
pyrus_communis	pycom08g18220
rosa_chinensis	RchiOBHm_Chr7g0232171
rosa_laevigata	RLG00000001380 RLG00000001383
rosa_roxburghii	Rroxscaffold_3G00228700
rosa_rugosa	Rorug07G0270100
rosa_samantha	Rh7BG398700 Rh7CG445000
rosa_wichuraiana	Rw7G035120 Rw7G035220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	171
AccIII	TCCGGA	1 cut(s)	220
AciI	CCGC	2 cut(s)	140, 490
AclWI	GGATC	1 cut(s)	77
AcsI	RAATTY	2 cut(s)	36, 47
AcuI	CTGAAG	4 cut(s)	113, 344, 356, 504
AcyI	GRCGYC	1 cut(s)	31
AfaI	GTAC	3 cut(s)	5, 701, 756
AfiI	CCNNNNNNNGG	1 cut(s)	701
AflIII	ACRYGT	1 cut(s)	169
AgsI	TTSAA	3 cut(s)	216, 394, 628
AjiI	CACGTC	1 cut(s)	569
AjnI	CCWGG	1 cut(s)	694
AjuI	GAANNNNNNNTTGG	2 cut(s)	764, 796
AluBI	AGCT	7 cut(s)	304, 340, 479, 518, 524, 559, 779
AluI	AGCT	7 cut(s)	304, 340, 479, 518, 524, 559, 779
Alw21I	GWGCWC	1 cut(s)	651
Alw26I	GTCTC	4 cut(s)	241, 457, 508, 577
AlwI	GGATC	1 cut(s)	77
Ama87I	CYCGRG	3 cut(s)	41, 341, 544
Aor13HI	TCCGGA	1 cut(s)	220
ApeKI	GCWGC	3 cut(s)	10, 512, 515
ApoI	RAATTY	2 cut(s)	36, 47
AspLEI	GCGC	1 cut(s)	435
AspS9I	GGNCC	1 cut(s)	541
AsuNHI	GCTAGC	1 cut(s)	55
AvaI	CYCGRG	3 cut(s)	41, 341, 544
AvaII	GGWCC	1 cut(s)	541
BaeGI	GKGCMC	1 cut(s)	183
Bbv12I	GWGCWC	1 cut(s)	651
BbvI	GCAGC	3 cut(s)	22, 499, 527
BccI	CCATC	1 cut(s)	275
BciT130I	CCWGG	1 cut(s)	696
BcoDI	GTCTC	4 cut(s)	241, 457, 508, 577
BfaI	CTAG	2 cut(s)	56, 456
BfmI	CTRYAG	1 cut(s)	513
BfoI	RGCGCY	1 cut(s)	436
BglII	AGATCT	1 cut(s)	535
BisI	GCNGC	3 cut(s)	11, 513, 516
BlsI	GCNGC	3 cut(s)	12, 514, 517
Bme1390I	CCNGG	1 cut(s)	696
Bme18I	GGWCC	1 cut(s)	541
BmeT110I	CYCGRG	3 cut(s)	41, 341, 544
BmgBI	CACGTC	1 cut(s)	569
BmgT120I	GGNCC	1 cut(s)	541
BmiI	GGNNCC	1 cut(s)	543
BmrFI	CCNGG	1 cut(s)	696
BmsI	GCATC	4 cut(s)	82, 196, 218, 520
BmtI	GCTAGC	1 cut(s)	59
BplI	GAGNNNNNCTC	2 cut(s)	238, 270
BpmI	CTGGAG	1 cut(s)	72
BsaBI	GATNNNNATC	2 cut(s)	534, 680
BsaHI	GRCGYC	1 cut(s)	31
BsaI	GGTCTC	1 cut(s)	508
BsaJI	CCNNGG	4 cut(s)	376, 497, 694, 695
BsaWI	WCCGGW	1 cut(s)	220
BsaXI	ACNNNNNCTCC	4 cut(s)	90, 120, 450, 480
Bsc4I	CCNNNNNNNGG	1 cut(s)	701
Bse1I	ACTGG	2 cut(s)	11, 591
Bse3DI	GCAATG	1 cut(s)	549
Bse8I	GATNNNNATC	2 cut(s)	534, 680
BseAI	TCCGGA	1 cut(s)	220
BseBI	CCWGG	1 cut(s)	696
BseDI	CCNNGG	4 cut(s)	376, 497, 694, 695
BseGI	GGATG	2 cut(s)	61, 211
BseJI	GATNNNNATC	2 cut(s)	534, 680
BseLI	CCNNNNNNNGG	1 cut(s)	701
BseMI	GCAATG	1 cut(s)	549
BseMII	CTCAG	2 cut(s)	236, 737
BseNI	ACTGG	2 cut(s)	11, 591
BseRI	GAGGAG	1 cut(s)	339
BseSI	GKGCMC	1 cut(s)	183
BseXI	GCAGC	3 cut(s)	22, 499, 527
Bsh1236I	CGCG	1 cut(s)	171
BsiHKAI	GWGCWC	1 cut(s)	651
BsiHKCI	CYCGRG	3 cut(s)	41, 341, 544
BsiSI	CCGG	2 cut(s)	221, 430
BslFI	GGGAC	1 cut(s)	667
BslI	CCNNNNNNNGG	1 cut(s)	701
BsmAI	GTCTC	4 cut(s)	241, 457, 508, 577
BsmFI	GGGAC	1 cut(s)	667
Bso31I	GGTCTC	1 cut(s)	508
BsoBI	CYCGRG	3 cut(s)	41, 341, 544
Bsp1286I	GDGCHC	2 cut(s)	183, 651
Bsp13I	TCCGGA	1 cut(s)	220
Bsp143I	GATC	6 cut(s)	82, 319, 535, 661, 675, 787
Bsp19I	CCATGG	1 cut(s)	376
BspACI	CCGC	2 cut(s)	140, 490
BspCNI	CTCAG	2 cut(s)	237, 738
BspEI	TCCGGA	1 cut(s)	220
BspFNI	CGCG	1 cut(s)	171
BspLI	GGNNCC	1 cut(s)	543
BspMAI	CTGCAG	1 cut(s)	517
BspOI	GCTAGC	1 cut(s)	59
BspPI	GGATC	1 cut(s)	77
BspTNI	GGTCTC	1 cut(s)	508
BsrDI	GCAATG	1 cut(s)	549
BsrI	ACTGG	2 cut(s)	11, 591
BssECI	CCNNGG	4 cut(s)	376, 497, 694, 695
BssMI	GATC	6 cut(s)	82, 319, 535, 661, 675, 787
BssNI	GRCGYC	1 cut(s)	31
BssT1I	CCWWGG	1 cut(s)	376
Bst2UI	CCWGG	1 cut(s)	696
Bst4CI	ACNGT	1 cut(s)	76
BstACI	GRCGYC	1 cut(s)	31
BstC8I	GCNNGC	2 cut(s)	57, 312
BstDEI	CTNAG	3 cut(s)	245, 617, 746
BstDSI	CCRYGG	2 cut(s)	376, 497
BstF5I	GGATG	2 cut(s)	61, 211
BstFNI	CGCG	1 cut(s)	171
BstH2I	RGCGCY	1 cut(s)	436
BstHHI	GCGC	1 cut(s)	435
BstKTI	GATC	6 cut(s)	85, 322, 538, 664, 678, 790
BstMAI	GTCTC	4 cut(s)	241, 457, 508, 577
BstMBI	GATC	6 cut(s)	82, 319, 535, 661, 675, 787
BstMWI	GCNNNNNNNGC	2 cut(s)	521, 530
BstNI	CCWGG	1 cut(s)	696
BstNSI	RCATGY	1 cut(s)	728
BstSCI	CCNGG	1 cut(s)	694
BstSFI	CTRYAG	1 cut(s)	513
BstSLI	GKGCMC	1 cut(s)	183
BstUI	CGCG	1 cut(s)	171
BstV1I	GCAGC	3 cut(s)	22, 499, 527
BstX2I	RGATCY	1 cut(s)	535
BstXI	CCANNNNNNTGG	1 cut(s)	190
BstYI	RGATCY	1 cut(s)	535
BtgI	CCRYGG	2 cut(s)	376, 497
BtrI	CACGTC	1 cut(s)	569
BtsCI	GGATG	2 cut(s)	61, 211
BtsIMutI	CAGTG	2 cut(s)	137, 732
Cac8I	GCNNGC	2 cut(s)	57, 312
CfoI	GCGC	1 cut(s)	435
Cfr13I	GGNCC	1 cut(s)	541
CseI	GACGC	2 cut(s)	20, 177
Csp6I	GTAC	3 cut(s)	4, 700, 755
CviAII	CATG	4 cut(s)	145, 299, 377, 725
CviQI	GTAC	3 cut(s)	4, 700, 755
DdeI	CTNAG	3 cut(s)	245, 617, 746
DpnI	GATC	6 cut(s)	84, 321, 537, 663, 677, 789
DpnII	GATC	6 cut(s)	82, 319, 535, 661, 675, 787
Eco130I	CCWWGG	1 cut(s)	376
Eco31I	GGTCTC	1 cut(s)	508
Eco47I	GGWCC	1 cut(s)	541
Eco57I	CTGAAG	4 cut(s)	113, 344, 356, 504
Eco88I	CYCGRG	3 cut(s)	41, 341, 544
EcoRI	GAATTC	1 cut(s)	36
EcoRII	CCWGG	1 cut(s)	694
EcoT14I	CCWWGG	1 cut(s)	376
EcoT22I	ATGCAT	1 cut(s)	211
ErhI	CCWWGG	1 cut(s)	376
FaeI	CATG	4 cut(s)	148, 302, 380, 728
FaiI	YATR	7 cut(s)	146, 300, 378, 638, 672, 720, 726
FaqI	GGGAC	1 cut(s)	667
FatI	CATG	4 cut(s)	144, 298, 376, 724
Fnu4HI	GCNGC	3 cut(s)	11, 513, 516
FokI	GGATG	2 cut(s)	48, 218
Fsp4HI	GCNGC	3 cut(s)	11, 513, 516
FspBI	CTAG	2 cut(s)	56, 456
GlaI	GCGC	1 cut(s)	434
GluI	GCNGC	3 cut(s)	11, 513, 516
GsuI	CTGGAG	1 cut(s)	72
HaeII	RGCGCY	1 cut(s)	436
HapII	CCGG	2 cut(s)	221, 430
HgaI	GACGC	2 cut(s)	20, 177
HhaI	GCGC	1 cut(s)	435
Hin1I	GRCGYC	1 cut(s)	31
Hin1II	CATG	4 cut(s)	148, 302, 380, 728
Hin6I	GCGC	1 cut(s)	433
HinP1I	GCGC	1 cut(s)	433
HincII	GTYRAC	1 cut(s)	373
HindII	GTYRAC	1 cut(s)	373
HinfI	GANTC	1 cut(s)	148
HpaI	GTTAAC	1 cut(s)	373
HpaII	CCGG	2 cut(s)	221, 430
Hpy166II	GTNNAC	2 cut(s)	373, 400
Hpy188I	TCNGA	3 cut(s)	157, 246, 336
Hpy188III	TCNNGA	8 cut(s)	41, 65, 80, 89, 221, 362, 456, 539
Hpy8I	GTNNAC	2 cut(s)	373, 400
Hpy99I	CGWCG	2 cut(s)	36, 606
HpyAV	CCTTC	1 cut(s)	341
HpyCH4III	ACNGT	1 cut(s)	76
HpyCH4IV	ACGT	1 cut(s)	568
HpyCH4V	TGCA	6 cut(s)	95, 209, 263, 290, 515, 533
HpyF10VI	GCNNNNNNNGC	2 cut(s)	521, 530
HpyF3I	CTNAG	3 cut(s)	245, 617, 746
HpySE526I	ACGT	1 cut(s)	568
Hsp92I	GRCGYC	1 cut(s)	31
Hsp92II	CATG	4 cut(s)	148, 302, 380, 728
HspAI	GCGC	1 cut(s)	433
Kpn2I	TCCGGA	1 cut(s)	220
KspAI	GTTAAC	1 cut(s)	373
Kzo9I	GATC	6 cut(s)	82, 319, 535, 661, 675, 787
Lsp1109I	GCAGC	3 cut(s)	22, 499, 527
LweI	GCATC	4 cut(s)	82, 196, 218, 520
MaeI	CTAG	2 cut(s)	56, 456
MaeII	ACGT	1 cut(s)	568
MaeIII	GTNAC	2 cut(s)	70, 294
MalI	GATC	6 cut(s)	84, 321, 537, 663, 677, 789
MboI	GATC	6 cut(s)	82, 319, 535, 661, 675, 787
MboII	GAAGA	2 cut(s)	204, 350
MfeI	CAATTG	1 cut(s)	188
MflI	RGATCY	1 cut(s)	535
MhlI	GDGCHC	2 cut(s)	183, 651
MluCI	AATT	8 cut(s)	15, 36, 47, 188, 195, 216, 628, 639
MluI	ACGCGT	1 cut(s)	169
MmeI	TCCRAC	1 cut(s)	558
MnlI	CCTC	9 cut(s)	37, 96, 217, 264, 357, 360, 374, 406, 582
Mph1103I	ATGCAT	1 cut(s)	211
MroI	TCCGGA	1 cut(s)	220
MseI	TTAA	2 cut(s)	198, 372
MslI	CAYNNNNRTG	2 cut(s)	66, 381
MspA1I	CMGCKG	2 cut(s)	479, 524
MspI	CCGG	2 cut(s)	221, 430
MspR9I	CCNGG	1 cut(s)	696
MunI	CAATTG	1 cut(s)	188
MvaI	CCWGG	1 cut(s)	696
MvnI	CGCG	1 cut(s)	171
MwoI	GCNNNNNNNGC	2 cut(s)	521, 530
NcoI	CCATGG	1 cut(s)	376
NdeII	GATC	6 cut(s)	82, 319, 535, 661, 675, 787
NheI	GCTAGC	1 cut(s)	55
NlaIII	CATG	4 cut(s)	148, 302, 380, 728
NlaIV	GGNNCC	1 cut(s)	543
NmeAIII	GCCGAG	1 cut(s)	580
NmuCI	GTSAC	2 cut(s)	70, 294
NsiI	ATGCAT	1 cut(s)	211
NspI	RCATGY	1 cut(s)	728
PaeR7I	CTCGAG	2 cut(s)	41, 341
PasI	CCCWGGG	1 cut(s)	695
PfeI	GAWTC	1 cut(s)	148
PkrI	GCNGC	3 cut(s)	12, 514, 517
Psp6I	CCWGG	1 cut(s)	694
PspGI	CCWGG	1 cut(s)	694
PspN4I	GGNNCC	1 cut(s)	543
PspPI	GGNCC	1 cut(s)	541
PspXI	VCTCGAGB	1 cut(s)	341
PstI	CTGCAG	1 cut(s)	517
PsuI	RGATCY	1 cut(s)	535
PvuII	CAGCTG	2 cut(s)	479, 524
RsaI	GTAC	3 cut(s)	5, 701, 756
RsaNI	GTAC	3 cut(s)	4, 700, 755
RseI	CAYNNNNRTG	2 cut(s)	66, 381
SaqAI	TTAA	2 cut(s)	198, 372
SatI	GCNGC	3 cut(s)	11, 513, 516
Sau3AI	GATC	6 cut(s)	82, 319, 535, 661, 675, 787
Sau96I	GGNCC	1 cut(s)	541
ScrFI	CCNGG	1 cut(s)	696
SduI	GDGCHC	2 cut(s)	183, 651
SfaNI	GCATC	4 cut(s)	82, 196, 218, 520
SfcI	CTRYAG	1 cut(s)	513
Sfr274I	CTCGAG	2 cut(s)	41, 341
SinI	GGWCC	1 cut(s)	541
SlaI	CTCGAG	2 cut(s)	41, 341
SmiMI	CAYNNNNRTG	2 cut(s)	66, 381
SmlI	CTYRAG	2 cut(s)	41, 341
SmoI	CTYRAG	2 cut(s)	41, 341
Sse9I	AATT	8 cut(s)	15, 36, 47, 188, 195, 216, 628, 639
SsiI	CCGC	2 cut(s)	140, 490
SspMI	CTAG	2 cut(s)	56, 456
StyD4I	CCNGG	1 cut(s)	694
StyI	CCWWGG	1 cut(s)	376
TaaI	ACNGT	1 cut(s)	76
TaiI	ACGT	1 cut(s)	571
TaqI	TCGA	4 cut(s)	34, 42, 342, 678
TasI	AATT	8 cut(s)	15, 36, 47, 188, 195, 216, 628, 639
TatI	WGTACW	1 cut(s)	3
TfiI	GAWTC	1 cut(s)	148
Tru1I	TTAA	2 cut(s)	198, 372
Tru9I	TTAA	2 cut(s)	198, 372
TscAI	CASTG	2 cut(s)	137, 739
TseFI	GTSAC	2 cut(s)	70, 294
TseI	GCWGC	3 cut(s)	10, 512, 515
Tsp45I	GTSAC	2 cut(s)	70, 294
TspDTI	ATGAA	1 cut(s)	161
TspGWI	ACGGA	2 cut(s)	98, 590
TspRI	CASTG	2 cut(s)	137, 739
VpaK11BI	GGWCC	1 cut(s)	541
XapI	RAATTY	2 cut(s)	36, 47
XbaI	TCTAGA	1 cut(s)	455
XceI	RCATGY	1 cut(s)	728
XhoI	CTCGAG	2 cut(s)	41, 341
XspI	CTAG	2 cut(s)	56, 456
Zsp2I	ATGCAT	1 cut(s)	211

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.