Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0013894

Physical Location & Seq

Genomic Coordinates Forward (+)

44407555 .. 44415144

Gene Structure 7590 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G543400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1011 bp

ATGAGGGAGGAAATGCCGTACGGAACCGAAGAAGGTGAGGGGGAGGAAGTTGGGTTTCCTATTAACACTCATAAGAGATTGGTGGTGGTGGGTTATGCTCTTACGTCTAAGAAGACGAAGAGCTTTTTGCAGCCAAAGCTTGAAGGTTTAGCTAGAAACAAGGGGATTTTATTTGTTGCTATCGATCATAACAGGCCCCTTTCGGATCAAGGTCCTTTTGACATTGTGCTGCATAAGTTGTCAGGAAAAGAGTGGCGCCAGATTCTTGAGGACTATAGGCAAACACATCCTGAAGTCACTGTTCTTGATCCACCTGATGCCATACAACATTTACACAATCGTCAATCCATGCTCCAGGCTGTTGCTGATATGAACTTGTCTGATTCCTATGGCAAAGTTGGTGTTCCCAGACAGTTGGTTGTCAAAAGAGATGCATCGTCCATACCTGATGCTGTTGCAAATAGTGGGCTGACACTACCCATTGTTGCAAAGCCACTGGTCAATGATGGAAGTGCAAAGTCACATGAATTATCACTTGCTTTTGATCGATACTCTCTCCAAAAGCTTGAACCTCCGCTTGTTCTTCAGGAGTTCGTAAACCATGGAGGTGTTCTTTTTAAAGTCTATATTGTGGGTGAAGCTATAAAAGTGGTCAGGCGTTTCTCTTTACCTGATGTCAGTAAACGAGAGCTCTCCAAAACGGCTGGTGTATATCGTTTCCCCAGGGTTTCTTGTGCTGCAGCTTCTGCAGATGATGCAGATCTGGACCCAGGCATTGCTGAACTTCCTCCACGACCGTTACTTGAGAGACTTGCCAAGGAACTTCGCCGTAGACTGGGTCTGCGGCTGTTCAACTTGGATATGATCAGAGAGCATGGGACCAGAGATCGGTTTTATGTCATTGACATTAACTATTTCCCTGGGTATGGGAAAATGCCAGAGTATGAGCACATATTTACGGACTTCCTCTTGAGCCTGGTGCAGGCCAAGTACAAAAAAAGATCTGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006793 GO:0006796 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009611 GO:0009791 GO:0009987 GO:0010154 GO:0010214 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0022414 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044464 GO:0047325 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051765 GO:0051766 GO:0052725 GO:0052726 GO:0061458

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Ins134_P3_kin

Protein Analysis

337

Amino Acids

37.87

Weight (kDa)

8.91

Isoelectric Point (pI)

42.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013894)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08170 AT4G08170
fragaria_vesca	FvH4_5g33450 FvH4_5g33450
malus_domestica	MD08G1211500.v1.1
prunus_persica	Prupe.1G543400_v2.0.a1 Prupe.1G543400_v2.0.a1
pyrus_communis	pycom08g18220
rosa_chinensis	RchiOBHm_Chr7g0232171
rosa_laevigata	RLG00000001380 RLG00000001383
rosa_roxburghii	Rroxscaffold_3G00228700
rosa_rugosa	Rorug07G0270100
rosa_samantha	Rh7BG398700 Rh7CG445000
rosa_wichuraiana	Rw7G035120 Rw7G035220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	255
AccI	GTMKAC	1 cut(s)	832
AciI	CCGC	2 cut(s)	575, 844
AclWI	GGATC	2 cut(s)	213, 302
AcuI	CTGAAG	2 cut(s)	312, 569
AcyI	GRCGYC	1 cut(s)	256
AfaI	GTAC	2 cut(s)	20, 992
AfiI	CCNNNNNNNGG	4 cut(s)	835, 888, 926, 982
AgsI	TTSAA	3 cut(s)	143, 569, 853
AjnI	CCWGG	5 cut(s)	354, 722, 769, 919, 975
AluBI	AGCT	7 cut(s)	123, 139, 152, 565, 641, 691, 743
AluI	AGCT	7 cut(s)	123, 139, 152, 565, 641, 691, 743
Alw21I	GWGCWC	2 cut(s)	693, 951
Alw26I	GTCTC	1 cut(s)	802
AlwI	GGATC	2 cut(s)	213, 302
AlwNI	CAGNNNCTG	1 cut(s)	746
AoxI	GGCC	2 cut(s)	194, 984
ApeKI	GCWGC	4 cut(s)	130, 229, 737, 740
AspLEI	GCGC	1 cut(s)	258
AspS9I	GGNCC	4 cut(s)	195, 212, 766, 879
AsuHPI	GGTGA	2 cut(s)	47, 647
AvaII	GGWCC	3 cut(s)	212, 766, 879
BanI	GGYRCC	1 cut(s)	255
BanII	GRGCYC	1 cut(s)	693
BbsI	GAAGAC	1 cut(s)	119
Bbv12I	GWGCWC	2 cut(s)	693, 951
BbvI	GCAGC	4 cut(s)	142, 216, 724, 752
BccI	CCATC	1 cut(s)	500
BceAI	ACGGC	2 cut(s)	717, 813
BciT130I	CCWGG	5 cut(s)	356, 724, 771, 921, 977
BclI	TGATCA	1 cut(s)	864
BcoDI	GTCTC	1 cut(s)	802
BfaI	CTAG	1 cut(s)	153
BfmI	CTRYAG	3 cut(s)	274, 738, 747
BfoI	RGCGCY	1 cut(s)	259
BglII	AGATCT	2 cut(s)	760, 1001
BisI	GCNGC	5 cut(s)	131, 230, 738, 741, 845
BlsI	GCNGC	5 cut(s)	132, 231, 739, 742, 846
Bme1390I	CCNGG	5 cut(s)	356, 724, 771, 921, 977
Bme18I	GGWCC	3 cut(s)	212, 766, 879
BmgT120I	GGNCC	4 cut(s)	195, 212, 766, 879
BmiI	GGNNCC	5 cut(s)	25, 197, 257, 768, 880
BmrFI	CCNGG	5 cut(s)	356, 724, 771, 921, 977
BmrI	ACTGGG	1 cut(s)	845
BmsI	GCATC	5 cut(s)	307, 421, 439, 443, 745
BmuI	ACTGGG	1 cut(s)	845
BpiI	GAAGAC	1 cut(s)	119
BpmI	CTGGAG	1 cut(s)	338
BpuEI	CTTGAG	3 cut(s)	287, 824, 991
Bsa29I	ATCGAT	2 cut(s)	183, 547
BsaBI	GATNNNNATC	1 cut(s)	759
BsaHI	GRCGYC	1 cut(s)	256
BsaJI	CCNNGG	7 cut(s)	601, 722, 723, 769, 816, 919, 920
Bsc4I	CCNNNNNNNGG	4 cut(s)	835, 888, 926, 982
Bse1I	ACTGG	2 cut(s)	501, 840
Bse3DI	GCAATG	1 cut(s)	774
Bse8I	GATNNNNATC	1 cut(s)	759
BseBI	CCWGG	5 cut(s)	356, 724, 771, 921, 977
BseCI	ATCGAT	2 cut(s)	183, 547
BseDI	CCNNGG	7 cut(s)	601, 722, 723, 769, 816, 919, 920
BseGI	GGATG	1 cut(s)	286
BseJI	GATNNNNATC	1 cut(s)	759
BseLI	CCNNNNNNNGG	4 cut(s)	835, 888, 926, 982
BseMI	GCAATG	1 cut(s)	774
BseNI	ACTGG	2 cut(s)	501, 840
BseXI	GCAGC	4 cut(s)	142, 216, 724, 752
BsgI	GTGCAG	1 cut(s)	1001
Bsh1285I	CGRYCG	1 cut(s)	797
BshFI	GGCC	2 cut(s)	196, 986
BshNI	GGYRCC	1 cut(s)	255
BshVI	ATCGAT	2 cut(s)	183, 547
BsiEI	CGRYCG	1 cut(s)	797
BsiHKAI	GWGCWC	2 cut(s)	693, 951
BsiWI	CGTACG	1 cut(s)	18
BslFI	GGGAC	1 cut(s)	892
BslI	CCNNNNNNNGG	4 cut(s)	835, 888, 926, 982
BsmAI	GTCTC	1 cut(s)	802
BsmFI	GGGAC	1 cut(s)	892
BsnI	GGCC	2 cut(s)	196, 986
Bsp1286I	GDGCHC	2 cut(s)	693, 951
Bsp143I	GATC	8 cut(s)	184, 205, 307, 544, 760, 864, 886, 1001
Bsp19I	CCATGG	1 cut(s)	601
BspACI	CCGC	2 cut(s)	575, 844
BspANI	GGCC	2 cut(s)	196, 986
BspDI	ATCGAT	2 cut(s)	183, 547
BspLI	GGNNCC	5 cut(s)	25, 197, 257, 768, 880
BspMAI	CTGCAG	2 cut(s)	742, 751
BspPI	GGATC	2 cut(s)	213, 302
BspQI	GCTCTTC	1 cut(s)	113
BspT107I	GGYRCC	1 cut(s)	255
BsrDI	GCAATG	1 cut(s)	774
BsrI	ACTGG	2 cut(s)	501, 840
BssECI	CCNNGG	7 cut(s)	601, 722, 723, 769, 816, 919, 920
BssMI	GATC	8 cut(s)	184, 205, 307, 544, 760, 864, 886, 1001
BssNI	GRCGYC	1 cut(s)	256
BssT1I	CCWWGG	2 cut(s)	601, 816
Bst2UI	CCWGG	5 cut(s)	356, 724, 771, 921, 977
Bst4CI	ACNGT	3 cut(s)	301, 414, 798
Bst6I	CTCTTC	1 cut(s)	113
BstACI	GRCGYC	1 cut(s)	256
BstAPI	GCANNNNNTGC	2 cut(s)	746, 755
BstC8I	GCNNGC	1 cut(s)	984
BstDEI	CTNAG	1 cut(s)	108
BstDSI	CCRYGG	1 cut(s)	601
BstENI	CCTNNNNNAGG	1 cut(s)	980
BstF5I	GGATG	1 cut(s)	286
BstH2I	RGCGCY	1 cut(s)	259
BstHHI	GCGC	1 cut(s)	258
BstKTI	GATC	8 cut(s)	187, 208, 310, 547, 763, 867, 889, 1004
BstMAI	GTCTC	1 cut(s)	802
BstMBI	GATC	8 cut(s)	184, 205, 307, 544, 760, 864, 886, 1001
BstMCI	CGRYCG	1 cut(s)	797
BstMWI	GCNNNNNNNGC	3 cut(s)	136, 746, 755
BstNI	CCWGG	5 cut(s)	356, 724, 771, 921, 977
BstSCI	CCNGG	5 cut(s)	354, 722, 769, 919, 975
BstSFI	CTRYAG	3 cut(s)	274, 738, 747
BstV1I	GCAGC	4 cut(s)	142, 216, 724, 752
BstV2I	GAAGAC	1 cut(s)	119
BstX2I	RGATCY	2 cut(s)	760, 1001
BstXI	CCANNNNNNTGG	1 cut(s)	415
BstYI	RGATCY	2 cut(s)	760, 1001
Bsu15I	ATCGAT	2 cut(s)	183, 547
BsuRI	GGCC	2 cut(s)	196, 986
BsuTUI	ATCGAT	2 cut(s)	183, 547
BtgI	CCRYGG	1 cut(s)	601
BtsCI	GGATG	1 cut(s)	286
BtsIMutI	CAGTG	2 cut(s)	297, 494
Cac8I	GCNNGC	1 cut(s)	984
CaiI	CAGNNNCTG	1 cut(s)	746
CfoI	GCGC	1 cut(s)	258
Cfr13I	GGNCC	4 cut(s)	195, 212, 766, 879
ClaI	ATCGAT	2 cut(s)	183, 547
Csp6I	GTAC	2 cut(s)	19, 991
CviAII	CATG	4 cut(s)	349, 524, 602, 875
CviQI	GTAC	2 cut(s)	19, 991
DdeI	CTNAG	1 cut(s)	108
DinI	GGCGCC	1 cut(s)	257
DpnI	GATC	8 cut(s)	186, 207, 309, 546, 762, 866, 888, 1003
DpnII	GATC	8 cut(s)	184, 205, 307, 544, 760, 864, 886, 1001
DraI	TTTAAA	1 cut(s)	619
Eam1104I	CTCTTC	1 cut(s)	113
EarI	CTCTTC	1 cut(s)	113
Ecl136II	GAGCTC	1 cut(s)	691
Eco130I	CCWWGG	2 cut(s)	601, 816
Eco24I	GRGCYC	1 cut(s)	693
Eco47I	GGWCC	3 cut(s)	212, 766, 879
Eco53kI	GAGCTC	1 cut(s)	691
Eco57I	CTGAAG	2 cut(s)	312, 569
EcoICRI	GAGCTC	1 cut(s)	691
EcoNI	CCTNNNNNAGG	1 cut(s)	980
EcoO109I	RGGNCCY	2 cut(s)	195, 212
EcoRII	CCWGG	5 cut(s)	354, 722, 769, 919, 975
EcoT14I	CCWWGG	2 cut(s)	601, 816
EcoT22I	ATGCAT	1 cut(s)	436
EcoT38I	GRGCYC	1 cut(s)	693
EgeI	GGCGCC	1 cut(s)	257
EheI	GGCGCC	1 cut(s)	257
ErhI	CCWWGG	2 cut(s)	601, 816
FaeI	CATG	4 cut(s)	352, 527, 605, 878
FaqI	GGGAC	1 cut(s)	892
FatI	CATG	4 cut(s)	348, 523, 601, 874
FbaI	TGATCA	1 cut(s)	864
FblI	GTMKAC	1 cut(s)	832
Fnu4HI	GCNGC	5 cut(s)	131, 230, 738, 741, 845
FokI	GGATG	1 cut(s)	273
FriOI	GRGCYC	1 cut(s)	693
Fsp4HI	GCNGC	5 cut(s)	131, 230, 738, 741, 845
FspBI	CTAG	1 cut(s)	153
GlaI	GCGC	1 cut(s)	257
GluI	GCNGC	5 cut(s)	131, 230, 738, 741, 845
GsuI	CTGGAG	1 cut(s)	338
HaeII	RGCGCY	1 cut(s)	259
HaeIII	GGCC	2 cut(s)	196, 986
HhaI	GCGC	1 cut(s)	258
Hin1I	GRCGYC	1 cut(s)	256
Hin1II	CATG	4 cut(s)	352, 527, 605, 878
Hin6I	GCGC	1 cut(s)	256
HinP1I	GCGC	1 cut(s)	256
HindIII	AAGCTT	2 cut(s)	137, 563
HinfI	GANTC	2 cut(s)	262, 383
HphI	GGTGA	2 cut(s)	47, 647
Hpy166II	GTNNAC	3 cut(s)	598, 683, 833
Hpy188I	TCNGA	3 cut(s)	205, 382, 869
Hpy188III	TCNNGA	7 cut(s)	243, 266, 290, 305, 587, 764, 970
Hpy8I	GTNNAC	3 cut(s)	598, 683, 833
HpyAV	CCTTC	2 cut(s)	26, 137
HpyCH4III	ACNGT	3 cut(s)	301, 414, 798
HpyCH4IV	ACGT	1 cut(s)	104
HpyF10VI	GCNNNNNNNGC	3 cut(s)	136, 746, 755
HpyF3I	CTNAG	1 cut(s)	108
HpySE526I	ACGT	1 cut(s)	104
Hsp92I	GRCGYC	1 cut(s)	256
Hsp92II	CATG	4 cut(s)	352, 527, 605, 878
HspAI	GCGC	1 cut(s)	256
KasI	GGCGCC	1 cut(s)	255
Ksp22I	TGATCA	1 cut(s)	864
Kzo9I	GATC	8 cut(s)	184, 205, 307, 544, 760, 864, 886, 1001
LguI	GCTCTTC	1 cut(s)	113
LmnI	GCTCC	1 cut(s)	357
Lsp1109I	GCAGC	4 cut(s)	142, 216, 724, 752
LweI	GCATC	5 cut(s)	307, 421, 439, 443, 745
MaeI	CTAG	1 cut(s)	153
MaeII	ACGT	1 cut(s)	104
MaeIII	GTNAC	3 cut(s)	295, 519, 798
MalI	GATC	8 cut(s)	186, 207, 309, 546, 762, 866, 888, 1003
MboI	GATC	8 cut(s)	184, 205, 307, 544, 760, 864, 886, 1001
MboII	GAAGA	4 cut(s)	41, 124, 130, 575
MflI	RGATCY	2 cut(s)	760, 1001
MhlI	GDGCHC	2 cut(s)	693, 951
MluCI	AATT	1 cut(s)	527
Mly113I	GGCGCC	1 cut(s)	256
MnlI	CCTC	7 cut(s)	31, 37, 262, 582, 599, 798, 977
Mph1103I	ATGCAT	1 cut(s)	436
MseI	TTAA	3 cut(s)	63, 618, 909
MslI	CAYNNNNRTG	1 cut(s)	606
MspR9I	CCNGG	5 cut(s)	356, 724, 771, 921, 977
MvaI	CCWGG	5 cut(s)	356, 724, 771, 921, 977
MwoI	GCNNNNNNNGC	3 cut(s)	136, 746, 755
NarI	GGCGCC	1 cut(s)	256
NcoI	CCATGG	1 cut(s)	601
NdeII	GATC	8 cut(s)	184, 205, 307, 544, 760, 864, 886, 1001
NlaIII	CATG	4 cut(s)	352, 527, 605, 878
NlaIV	GGNNCC	5 cut(s)	25, 197, 257, 768, 880
NmuCI	GTSAC	2 cut(s)	295, 519
NsiI	ATGCAT	1 cut(s)	436
PasI	CCCWGGG	2 cut(s)	723, 920
PciSI	GCTCTTC	1 cut(s)	113
PfeI	GAWTC	2 cut(s)	262, 383
Pfl23II	CGTACG	1 cut(s)	18
PflFI	GACNNNGTC	1 cut(s)	837
PkrI	GCNGC	5 cut(s)	132, 231, 739, 742, 846
PluTI	GGCGCC	1 cut(s)	259
PpuMI	RGGWCCY	1 cut(s)	212
Psp124BI	GAGCTC	1 cut(s)	693
Psp5II	RGGWCCY	1 cut(s)	212
Psp6I	CCWGG	5 cut(s)	354, 722, 769, 919, 975
PspGI	CCWGG	5 cut(s)	354, 722, 769, 919, 975
PspLI	CGTACG	1 cut(s)	18
PspN4I	GGNNCC	5 cut(s)	25, 197, 257, 768, 880
PspPI	GGNCC	4 cut(s)	195, 212, 766, 879
PspPPI	RGGWCCY	1 cut(s)	212
PstI	CTGCAG	2 cut(s)	742, 751
PstNI	CAGNNNCTG	1 cut(s)	746
PsuI	RGATCY	2 cut(s)	760, 1001
PsyI	GACNNNGTC	1 cut(s)	837
RsaI	GTAC	2 cut(s)	20, 992
RsaNI	GTAC	2 cut(s)	19, 991
RseI	CAYNNNNRTG	1 cut(s)	606
SacI	GAGCTC	1 cut(s)	693
SapI	GCTCTTC	1 cut(s)	113
SaqAI	TTAA	3 cut(s)	63, 618, 909
SatI	GCNGC	5 cut(s)	131, 230, 738, 741, 845
Sau3AI	GATC	8 cut(s)	184, 205, 307, 544, 760, 864, 886, 1001
Sau96I	GGNCC	4 cut(s)	195, 212, 766, 879
ScrFI	CCNGG	5 cut(s)	356, 724, 771, 921, 977
SduI	GDGCHC	2 cut(s)	693, 951
SfaNI	GCATC	5 cut(s)	307, 421, 439, 443, 745
SfcI	CTRYAG	3 cut(s)	274, 738, 747
SfoI	GGCGCC	1 cut(s)	257
SinI	GGWCC	3 cut(s)	212, 766, 879
SmiMI	CAYNNNNRTG	1 cut(s)	606
SmlI	CTYRAG	3 cut(s)	266, 803, 970
SmoI	CTYRAG	3 cut(s)	266, 803, 970
Sse9I	AATT	1 cut(s)	527
SsiI	CCGC	2 cut(s)	575, 844
SspDI	GGCGCC	1 cut(s)	255
SspMI	CTAG	1 cut(s)	153
SstI	GAGCTC	1 cut(s)	693
StyD4I	CCNGG	5 cut(s)	354, 722, 769, 919, 975
StyI	CCWWGG	2 cut(s)	601, 816
TaaI	ACNGT	3 cut(s)	301, 414, 798
TaiI	ACGT	1 cut(s)	107
TaqI	TCGA	2 cut(s)	183, 547
TasI	AATT	1 cut(s)	527
TatI	WGTACW	1 cut(s)	990
TauI	GCSGC	1 cut(s)	847
TfiI	GAWTC	2 cut(s)	262, 383
Tru1I	TTAA	3 cut(s)	63, 618, 909
Tru9I	TTAA	3 cut(s)	63, 618, 909
TscAI	CASTG	2 cut(s)	304, 501
TseFI	GTSAC	2 cut(s)	295, 519
TseI	GCWGC	4 cut(s)	130, 229, 737, 740
Tsp45I	GTSAC	2 cut(s)	295, 519
TspDTI	ATGAA	2 cut(s)	386, 540
TspGWI	ACGGA	2 cut(s)	36, 974
TspRI	CASTG	2 cut(s)	304, 501
Tth111I	GACNNNGTC	1 cut(s)	837
VpaK11BI	GGWCC	3 cut(s)	212, 766, 879
XagI	CCTNNNNNAGG	1 cut(s)	980
XmiI	GTMKAC	1 cut(s)	832
XspI	CTAG	1 cut(s)	153
Zsp2I	ATGCAT	1 cut(s)	436

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.