Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0013894

Physical Location & Seq

Genomic Coordinates Forward (+)

27511775 .. 27517593

Gene Structure 5819 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1211500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1026 bp

ATGGTGAGAGAAATGAGGGAGGAAATGACGTACGGAATCGAAGAAGGTGAGAGGGAGGAAGAAGGTGGGTTCCCTAATACCAGTCATAAGAGATTGGTGGTGGTGGGTTACGCTCTTACCTCTAAGAAGATTAAGAGCTTTTTGCAGCCAAAGCTCGAAGGTTTAGCTAGAAACAAGGGGATATTGTTTGTTGCTATTGATCATAACAAGCCCCTTTCGGATCAAGGCCCTTTTGACATAGTGCTGCATAAGCTGTCTGGAAAAGAGTGGCGCCAGATTCTTGAGGACTATAGGCAAACACACCCAGAAGTCACCGTTCTTGATCCTCCTGATGCCATACAACATTTACACAATCGTCAATCCATGCTCCAGGCGGTTGCTGATTTGAACTTGTCTGACTCTTATGGCAAAGTTGGGGTTCCCAAACAGTTGGTTGTTAAGAAAGATGCATCGTCCATCCCTGATGCTGTTGCAAATTTTGGGCTGAAACTACCCATTGTTGCAAAGCCACTGGTCAATGATGGAAGCAAAAAGTCACATGAATTATCACTTGCTTACGATCGGTACTCTCTCCAAAAGCTTGACCCTCCTCTTGTTCTTCAGGAGTTTGTAAACCATGGAGGCGTTCTTTTTAAAGTCTATATAGTTGGTGAAGCTATAAAAGTGGTCAGGCGTTTCTCTTTACCGGATGTTACGAAACGAGAGCTCTCCAAAACGGCTGGAGTATATCGTTTTCCGAGGGTTTCTTGCGCTGCAGCGTCAGCAGATGATGCAGATCTGGACCCATGCATTGCTGAACTTCCTCCGCGACCATTACTTGAGAAACTTGCCAAGGAACTTCGCCGTCGACTGGGTCTGCGATTGTTCAACTTGGATATGATCCGAGAGCATGGGACCAGAGATCGGTTTTATGTCATTGACATTAACTACTTCCCAGGGTATGGGAAAATGCCGGAATATGAGCACATATTCACGGACTTCCTCTTAAGCCTGGTGAAGGGGAAGCTCAAAAAGAGATCTGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006793 GO:0006796 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009611 GO:0009791 GO:0009987 GO:0010154 GO:0010214 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0022414 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044464 GO:0047325 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051765 GO:0051766 GO:0052725 GO:0052726 GO:0061458

KEGG Pathways

Metabolic & Signaling

ko00562 ko01100 ko04070 map00562 map01100 map04070

Pfam Domains

Protein Families

Ins134_P3_kin

Protein Analysis

342

Amino Acids

38.58

Weight (kDa)

9.13

Isoelectric Point (pI)

39.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ins134_P3_kin_N	PF17927	34 - 113	7.4e-39	Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain
Ins134_P3_kin	PF05770	133 - 329	1.3e-93	Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0013894)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08170 AT4G08170
fragaria_vesca	FvH4_5g33450 FvH4_5g33450
malus_domestica	MD08G1211500.v1.1
prunus_persica	Prupe.1G543400_v2.0.a1 Prupe.1G543400_v2.0.a1
pyrus_communis	pycom08g18220
rosa_chinensis	RchiOBHm_Chr7g0232171
rosa_laevigata	RLG00000001380 RLG00000001383
rosa_roxburghii	Rroxscaffold_3G00228700
rosa_rugosa	Rorug07G0270100
rosa_samantha	Rh7BG398700 Rh7CG445000
rosa_wichuraiana	Rw7G035120 Rw7G035220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	270
AccB7I	CCANNNNNTGG	1 cut(s)	941
AccI	GTMKAC	1 cut(s)	847
AccII	CGCG	1 cut(s)	808
AciI	CCGC	2 cut(s)	374, 806
AclWI	GGATC	3 cut(s)	228, 317, 874
AcsI	RAATTY	1 cut(s)	475
AcuI	CTGAAG	1 cut(s)	584
AcyI	GRCGYC	1 cut(s)	271
AfaI	GTAC	2 cut(s)	32, 566
AfiI	CCNNNNNNNGG	4 cut(s)	850, 903, 941, 997
AflII	CTTAAG	1 cut(s)	985
AgsI	TTSAA	2 cut(s)	388, 868
AjnI	CCWGG	3 cut(s)	369, 934, 990
AluBI	AGCT	8 cut(s)	138, 154, 167, 253, 580, 656, 706, 1006
AluI	AGCT	8 cut(s)	138, 154, 167, 253, 580, 656, 706, 1006
Alw21I	GWGCWC	2 cut(s)	708, 966
AlwI	GGATC	3 cut(s)	228, 317, 874
AoxI	GGCC	1 cut(s)	226
ApeKI	GCWGC	4 cut(s)	145, 244, 752, 755
ApoI	RAATTY	1 cut(s)	475
AspLEI	GCGC	2 cut(s)	273, 752
AspS9I	GGNCC	3 cut(s)	227, 781, 894
AsuHPI	GGTGA	5 cut(s)	16, 59, 304, 662, 1006
AvaII	GGWCC	2 cut(s)	781, 894
BanI	GGYRCC	1 cut(s)	270
BanII	GRGCYC	1 cut(s)	708
Bbv12I	GWGCWC	2 cut(s)	708, 966
BbvI	GCAGC	4 cut(s)	157, 231, 739, 767
BccI	CCATC	2 cut(s)	464, 515
BceAI	ACGGC	2 cut(s)	732, 828
BciT130I	CCWGG	3 cut(s)	371, 936, 992
BclI	TGATCA	1 cut(s)	199
BfaI	CTAG	1 cut(s)	168
BfmI	CTRYAG	2 cut(s)	289, 753
BfoI	RGCGCY	1 cut(s)	274
BfrI	CTTAAG	1 cut(s)	985
BglII	AGATCT	2 cut(s)	775, 1016
BisI	GCNGC	4 cut(s)	146, 245, 753, 756
BlsI	GCNGC	4 cut(s)	147, 246, 754, 757
Bme1390I	CCNGG	3 cut(s)	371, 936, 992
Bme18I	GGWCC	2 cut(s)	781, 894
BmgT120I	GGNCC	3 cut(s)	227, 781, 894
BmiI	GGNNCC	5 cut(s)	71, 272, 420, 783, 895
BmrFI	CCNGG	3 cut(s)	371, 936, 992
BmrI	ACTGGG	1 cut(s)	860
BmsI	GCATC	5 cut(s)	322, 436, 454, 458, 760
BmuI	ACTGGG	1 cut(s)	860
BpmI	CTGGAG	2 cut(s)	353, 741
BpuEI	CTTGAG	2 cut(s)	302, 839
BsaBI	GATNNNNATC	1 cut(s)	774
BsaHI	GRCGYC	1 cut(s)	271
BsaJI	CCNNGG	5 cut(s)	616, 737, 831, 934, 935
BsaWI	WCCGGW	1 cut(s)	685
Bsc4I	CCNNNNNNNGG	4 cut(s)	850, 903, 941, 997
Bse1I	ACTGG	3 cut(s)	81, 516, 855
Bse3DI	GCAATG	1 cut(s)	789
Bse8I	GATNNNNATC	1 cut(s)	774
BseBI	CCWGG	3 cut(s)	371, 936, 992
BseDI	CCNNGG	5 cut(s)	616, 737, 831, 934, 935
BseGI	GGATG	2 cut(s)	456, 694
BseJI	GATNNNNATC	1 cut(s)	774
BseLI	CCNNNNNNNGG	4 cut(s)	850, 903, 941, 997
BseMI	GCAATG	1 cut(s)	789
BseNI	ACTGG	3 cut(s)	81, 516, 855
BseRI	GAGGAG	1 cut(s)	579
BseXI	GCAGC	4 cut(s)	157, 231, 739, 767
Bsh1236I	CGCG	1 cut(s)	808
Bsh1285I	CGRYCG	1 cut(s)	562
BshFI	GGCC	1 cut(s)	228
BshNI	GGYRCC	1 cut(s)	270
BsiEI	CGRYCG	1 cut(s)	562
BsiHKAI	GWGCWC	2 cut(s)	708, 966
BsiSI	CCGG	2 cut(s)	686, 953
BsiWI	CGTACG	1 cut(s)	30
BslFI	GGGAC	1 cut(s)	907
BslI	CCNNNNNNNGG	4 cut(s)	850, 903, 941, 997
BsmFI	GGGAC	1 cut(s)	907
BsnI	GGCC	1 cut(s)	228
Bsp1286I	GDGCHC	2 cut(s)	708, 966
Bsp143I	GATC	8 cut(s)	199, 220, 322, 559, 775, 879, 901, 1016
Bsp19I	CCATGG	1 cut(s)	616
BspACI	CCGC	2 cut(s)	374, 806
BspANI	GGCC	1 cut(s)	228
BspFNI	CGCG	1 cut(s)	808
BspLI	GGNNCC	5 cut(s)	71, 272, 420, 783, 895
BspMAI	CTGCAG	1 cut(s)	757
BspPI	GGATC	3 cut(s)	228, 317, 874
BspT107I	GGYRCC	1 cut(s)	270
BspTI	CTTAAG	1 cut(s)	985
BsrDI	GCAATG	1 cut(s)	789
BsrI	ACTGG	3 cut(s)	81, 516, 855
BssECI	CCNNGG	5 cut(s)	616, 737, 831, 934, 935
BssMI	GATC	8 cut(s)	199, 220, 322, 559, 775, 879, 901, 1016
BssNI	GRCGYC	1 cut(s)	271
BssT1I	CCWWGG	2 cut(s)	616, 831
Bst2UI	CCWGG	3 cut(s)	371, 936, 992
Bst4CI	ACNGT	2 cut(s)	316, 429
BstACI	GRCGYC	1 cut(s)	271
BstAFI	CTTAAG	1 cut(s)	985
BstAPI	GCANNNNNTGC	1 cut(s)	770
BstDEI	CTNAG	1 cut(s)	123
BstDSI	CCRYGG	1 cut(s)	616
BstENI	CCTNNNNNAGG	1 cut(s)	995
BstF5I	GGATG	2 cut(s)	456, 694
BstFNI	CGCG	1 cut(s)	808
BstH2I	RGCGCY	1 cut(s)	274
BstHHI	GCGC	2 cut(s)	273, 752
BstKTI	GATC	8 cut(s)	202, 223, 325, 562, 778, 882, 904, 1019
BstMBI	GATC	8 cut(s)	199, 220, 322, 559, 775, 879, 901, 1016
BstMCI	CGRYCG	1 cut(s)	562
BstMWI	GCNNNNNNNGC	4 cut(s)	151, 250, 761, 770
BstNI	CCWGG	3 cut(s)	371, 936, 992
BstSCI	CCNGG	3 cut(s)	369, 934, 990
BstSFI	CTRYAG	2 cut(s)	289, 753
BstUI	CGCG	1 cut(s)	808
BstV1I	GCAGC	4 cut(s)	157, 231, 739, 767
BstX2I	RGATCY	2 cut(s)	775, 1016
BstXI	CCANNNNNNTGG	1 cut(s)	430
BstYI	RGATCY	2 cut(s)	775, 1016
BsuRI	GGCC	1 cut(s)	228
BtgI	CCRYGG	1 cut(s)	616
BtsCI	GGATG	2 cut(s)	456, 694
BtsIMutI	CAGTG	1 cut(s)	509
CfoI	GCGC	2 cut(s)	273, 752
Cfr13I	GGNCC	3 cut(s)	227, 781, 894
CseI	GACGC	1 cut(s)	747
Csp6I	GTAC	2 cut(s)	31, 565
CviAII	CATG	5 cut(s)	364, 539, 617, 786, 890
CviQI	GTAC	2 cut(s)	31, 565
DdeI	CTNAG	1 cut(s)	123
DinI	GGCGCC	1 cut(s)	272
DpnI	GATC	8 cut(s)	201, 222, 324, 561, 777, 881, 903, 1018
DpnII	GATC	8 cut(s)	199, 220, 322, 559, 775, 879, 901, 1016
DraI	TTTAAA	1 cut(s)	634
Ecl136II	GAGCTC	1 cut(s)	706
Eco130I	CCWWGG	2 cut(s)	616, 831
Eco24I	GRGCYC	1 cut(s)	708
Eco47I	GGWCC	2 cut(s)	781, 894
Eco53kI	GAGCTC	1 cut(s)	706
Eco57I	CTGAAG	1 cut(s)	584
EcoICRI	GAGCTC	1 cut(s)	706
EcoNI	CCTNNNNNAGG	1 cut(s)	995
EcoO109I	RGGNCCY	1 cut(s)	227
EcoRII	CCWGG	3 cut(s)	369, 934, 990
EcoT14I	CCWWGG	2 cut(s)	616, 831
EcoT22I	ATGCAT	2 cut(s)	451, 791
EcoT38I	GRGCYC	1 cut(s)	708
EgeI	GGCGCC	1 cut(s)	272
EheI	GGCGCC	1 cut(s)	272
ErhI	CCWWGG	2 cut(s)	616, 831
FaeI	CATG	5 cut(s)	367, 542, 620, 789, 893
FaqI	GGGAC	1 cut(s)	907
FatI	CATG	5 cut(s)	363, 538, 616, 785, 889
FbaI	TGATCA	1 cut(s)	199
FblI	GTMKAC	1 cut(s)	847
Fnu4HI	GCNGC	4 cut(s)	146, 245, 753, 756
FokI	GGATG	2 cut(s)	443, 701
FriOI	GRGCYC	1 cut(s)	708
Fsp4HI	GCNGC	4 cut(s)	146, 245, 753, 756
FspBI	CTAG	1 cut(s)	168
GlaI	GCGC	2 cut(s)	272, 751
GluI	GCNGC	4 cut(s)	146, 245, 753, 756
GsuI	CTGGAG	2 cut(s)	353, 741
HaeII	RGCGCY	1 cut(s)	274
HaeIII	GGCC	1 cut(s)	228
HapII	CCGG	2 cut(s)	686, 953
HgaI	GACGC	1 cut(s)	747
HhaI	GCGC	2 cut(s)	273, 752
Hin1I	GRCGYC	1 cut(s)	271
Hin1II	CATG	5 cut(s)	367, 542, 620, 789, 893
Hin6I	GCGC	2 cut(s)	271, 750
HinP1I	GCGC	2 cut(s)	271, 750
HincII	GTYRAC	1 cut(s)	848
HindII	GTYRAC	1 cut(s)	848
HindIII	AAGCTT	1 cut(s)	578
HinfI	GANTC	3 cut(s)	36, 277, 398
HpaII	CCGG	2 cut(s)	686, 953
HphI	GGTGA	5 cut(s)	16, 59, 304, 662, 1006
Hpy166II	GTNNAC	2 cut(s)	613, 848
Hpy188I	TCNGA	4 cut(s)	220, 397, 738, 884
Hpy188III	TCNNGA	6 cut(s)	258, 281, 320, 329, 602, 779
Hpy8I	GTNNAC	2 cut(s)	613, 848
Hpy99I	CGWCG	1 cut(s)	849
HpyAV	CCTTC	4 cut(s)	38, 56, 152, 991
HpyCH4III	ACNGT	2 cut(s)	316, 429
HpyCH4IV	ACGT	1 cut(s)	29
HpyCH4V	TGCA	8 cut(s)	145, 247, 449, 473, 503, 755, 773, 789
HpyF10VI	GCNNNNNNNGC	4 cut(s)	151, 250, 761, 770
HpyF3I	CTNAG	1 cut(s)	123
HpySE526I	ACGT	1 cut(s)	29
Hsp92I	GRCGYC	1 cut(s)	271
Hsp92II	CATG	5 cut(s)	367, 542, 620, 789, 893
HspAI	GCGC	2 cut(s)	271, 750
KasI	GGCGCC	1 cut(s)	270
Ksp22I	TGATCA	1 cut(s)	199
Kzo9I	GATC	8 cut(s)	199, 220, 322, 559, 775, 879, 901, 1016
LmnI	GCTCC	1 cut(s)	372
Lsp1109I	GCAGC	4 cut(s)	157, 231, 739, 767
LweI	GCATC	5 cut(s)	322, 436, 454, 458, 760
MaeI	CTAG	1 cut(s)	168
MaeII	ACGT	1 cut(s)	29
MaeIII	GTNAC	4 cut(s)	107, 310, 534, 691
MalI	GATC	8 cut(s)	201, 222, 324, 561, 777, 881, 903, 1018
MboI	GATC	8 cut(s)	199, 220, 322, 559, 775, 879, 901, 1016
MboII	GAAGA	4 cut(s)	53, 71, 139, 590
MflI	RGATCY	2 cut(s)	775, 1016
MhlI	GDGCHC	2 cut(s)	708, 966
MluCI	AATT	2 cut(s)	475, 542
Mly113I	GGCGCC	1 cut(s)	271
MlyI	GAGTC	1 cut(s)	392
Mph1103I	ATGCAT	2 cut(s)	451, 791
MseI	TTAA	5 cut(s)	132, 438, 633, 924, 986
MspCI	CTTAAG	1 cut(s)	985
MspI	CCGG	2 cut(s)	686, 953
MspR9I	CCNGG	3 cut(s)	371, 936, 992
MvaI	CCWGG	3 cut(s)	371, 936, 992
MvnI	CGCG	1 cut(s)	808
MwoI	GCNNNNNNNGC	4 cut(s)	151, 250, 761, 770
NarI	GGCGCC	1 cut(s)	271
NcoI	CCATGG	1 cut(s)	616
NdeII	GATC	8 cut(s)	199, 220, 322, 559, 775, 879, 901, 1016
NlaIII	CATG	5 cut(s)	367, 542, 620, 789, 893
NlaIV	GGNNCC	5 cut(s)	71, 272, 420, 783, 895
NmuCI	GTSAC	2 cut(s)	310, 534
NsiI	ATGCAT	2 cut(s)	451, 791
PasI	CCCWGGG	1 cut(s)	935
PfeI	GAWTC	2 cut(s)	36, 277
Pfl23II	CGTACG	1 cut(s)	30
PflFI	GACNNNGTC	1 cut(s)	852
PflMI	CCANNNNNTGG	1 cut(s)	941
PkrI	GCNGC	4 cut(s)	147, 246, 754, 757
Ple19I	CGATCG	1 cut(s)	562
PleI	GAGTC	1 cut(s)	392
PluTI	GGCGCC	1 cut(s)	274
PpsI	GAGTC	1 cut(s)	392
Psp124BI	GAGCTC	1 cut(s)	708
Psp6I	CCWGG	3 cut(s)	369, 934, 990
PspGI	CCWGG	3 cut(s)	369, 934, 990
PspLI	CGTACG	1 cut(s)	30
PspN4I	GGNNCC	5 cut(s)	71, 272, 420, 783, 895
PspPI	GGNCC	3 cut(s)	227, 781, 894
PstI	CTGCAG	1 cut(s)	757
PsuI	RGATCY	2 cut(s)	775, 1016
PsyI	GACNNNGTC	1 cut(s)	852
PvuI	CGATCG	1 cut(s)	562
RsaI	GTAC	2 cut(s)	32, 566
RsaNI	GTAC	2 cut(s)	31, 565
SacI	GAGCTC	1 cut(s)	708
SalI	GTCGAC	1 cut(s)	846
SaqAI	TTAA	5 cut(s)	132, 438, 633, 924, 986
SatI	GCNGC	4 cut(s)	146, 245, 753, 756
Sau3AI	GATC	8 cut(s)	199, 220, 322, 559, 775, 879, 901, 1016
Sau96I	GGNCC	3 cut(s)	227, 781, 894
SchI	GAGTC	1 cut(s)	392
ScrFI	CCNGG	3 cut(s)	371, 936, 992
SduI	GDGCHC	2 cut(s)	708, 966
SfaNI	GCATC	5 cut(s)	322, 436, 454, 458, 760
SfcI	CTRYAG	2 cut(s)	289, 753
SfoI	GGCGCC	1 cut(s)	272
SinI	GGWCC	2 cut(s)	781, 894
SmlI	CTYRAG	3 cut(s)	281, 818, 985
SmoI	CTYRAG	3 cut(s)	281, 818, 985
Sse9I	AATT	2 cut(s)	475, 542
SsiI	CCGC	2 cut(s)	374, 806
SspDI	GGCGCC	1 cut(s)	270
SspMI	CTAG	1 cut(s)	168
SstI	GAGCTC	1 cut(s)	708
StyD4I	CCNGG	3 cut(s)	369, 934, 990
StyI	CCWWGG	2 cut(s)	616, 831
TaaI	ACNGT	2 cut(s)	316, 429
TaiI	ACGT	1 cut(s)	32
TaqI	TCGA	3 cut(s)	39, 156, 847
TasI	AATT	2 cut(s)	475, 542
TfiI	GAWTC	2 cut(s)	36, 277
Tru1I	TTAA	5 cut(s)	132, 438, 633, 924, 986
Tru9I	TTAA	5 cut(s)	132, 438, 633, 924, 986
TscAI	CASTG	1 cut(s)	516
TseFI	GTSAC	2 cut(s)	310, 534
TseI	GCWGC	4 cut(s)	145, 244, 752, 755
Tsp45I	GTSAC	2 cut(s)	310, 534
TspDTI	ATGAA	1 cut(s)	555
TspGWI	ACGGA	2 cut(s)	48, 989
TspRI	CASTG	1 cut(s)	516
Tth111I	GACNNNGTC	1 cut(s)	852
Van91I	CCANNNNNTGG	1 cut(s)	941
Vha464I	CTTAAG	1 cut(s)	985
VpaK11BI	GGWCC	2 cut(s)	781, 894
XagI	CCTNNNNNAGG	1 cut(s)	995
XapI	RAATTY	1 cut(s)	475
XmiI	GTMKAC	1 cut(s)	847
XspI	CTAG	1 cut(s)	168
Zsp2I	ATGCAT	2 cut(s)	451, 791

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.