AT4G13030
ERF Family

P-loop containing nucleoside triphosphate hydrolases superfamily protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
7607241 .. 7609876
2636 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G13030.2

Sequence Viewer

Length: 1446 bp
ATGGGTGGTGATACTTTCAAAGATGATGTTGTAGATGAAGAATCTTCAAGATCATCATCATCATCTCCTTGTTCTTGTTGTTTCAGTGATGATTTAGGGTTTAAGGATGATGTTTCTGAAGAGAATTTCACCAATTTCTCTAATCATGTTACTGATTTGAGAAGGAGAGAAAAAGCTTACCAAGAGATTCTTCAAAGTCATGATCTTTTGCTTAGAACCAGCAAACGGAAACTTAGACAAGCCAGAAATGAGATTTTGAGCTATACTCCTGGATCATGGTCTGATGTCAAGTTGAGTGATTACAATATTCCAAAAACGACATCGATCATGCTAGTTGGTCCGAAAGGGGCTGGGAAGAGTAGCCTTGTTAATAAGATTACAAGAGTGATCGAAGACGACGCGTTTCTCCTAGATAGAGCTCAAGAATCATTTGGTACCCCGTCTAAAGGAGGAACATACTTTGTTCAGGAGTATATGATCTCGAGAGGAGGTTCCGCTTCATTTTGCCTATATGATACGCGTGGATTGAGCCGTATATCATCGTCTGATAACACTAGTATGATTGAGCAATGGATGACAAGGGGCGTGCTTCACGGCGAACCTGTCATCTGGGCATCTGATAGCTCGGATTTAAAGGATAGACTCATCCGAGATGGTGGTACCGGTTATGAGAGAAGGAAAGTGAATTCGATTATCTTTGTTGTTAATGCGGTCGAAATCTTGAAATCGATGGAATGTGAAACGAGCTATGCTTCGATGATAACCACGGCCTTTAACTCTCCGATACTATTGTTTAAAGATGATAAGCCAGCAGTCGTTATGACTCATGGAGATATGCTTTCACGCGAGGAACGTGCCCGAGTACGAGTTTTCCTTGGAGAACTTCTCGGTATCCCTCCTCACAAACAGATATTTGACATTCCAGAAAGCCGGGACACAGCCACCGCGATAACAATCTGCAACTTGCTATGCTATAGTCTTCAACATGCTGATAAGAATTTTGTGTTTCTTCCCAAAAAGAACTTCACTATATCCAAGGTGGGAGGAGGAGGCCTCACAAAATGGATCAGCTTATTAGACATAATATCAATTGCTCTGGTTTTATTCATGGCATTGGCGTCAATCTGGTTTGTTACTCATAATCCCGTAAGCGGCCAAAAATTAGCTAATGAGACTCAGCAAAAACTGCTTAAATTCCCAAGTCCATGGTTAAATAACCTCACACATAAGGCAAAGCCGATGCGTCGCTTTGGGCCTAAGCGGATCATTAAAGGTCCAAACCTTGCATGCGTTCAACATCCTAAGTCTGAGTTTGTGCCTGAAAGTGAGCCAATAAGCATTGATTTGCATATAGCTCGACGCTTATGGTTCAACGAAGAGCAAGTGGCCGAGGCCGAACCAAGCTTTGATTGGCGAACTACTCGACGCTTGTGGTATGTTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

481

Amino Acids

54.3

Weight (kDa)

8.02

Isoelectric Point (pI)

51.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 434, 659
AccB1I GGYRCC 2 cut(s) 434, 659
AccII CGCG 4 cut(s) 401, 520, 846, 947
AciI CCGC 5 cut(s) 495, 710, 945, 1152, 1261
AclWI GGATC 3 cut(s) 280, 1073, 1271
AcoI YGGCCR 2 cut(s) 1153, 1386
AcsI RAATTY 4 cut(s) 124, 685, 997, 1193
AcuI CTGAAG 1 cut(s) 138
AcyI GRCGYC 1 cut(s) 1118
AfaI GTAC 3 cut(s) 436, 661, 864
AfiI CCNNNNNNNGG 3 cut(s) 225, 446, 1151
AflIII ACRYGT 2 cut(s) 399, 518
AgeI ACCGGT 1 cut(s) 662
AgsI TTSAA 7 cut(s) 19, 48, 194, 724, 983, 1295, 1372
AhlI ACTAGT 1 cut(s) 554
AjnI CCWGG 1 cut(s) 268
AjuI GAANNNNNNNTTGG 4 cut(s) 174, 206, 1007, 1039
AluBI AGCT 9 cut(s) 176, 261, 419, 624, 747, 1071, 1166, 1355, 1404
AluI AGCT 9 cut(s) 176, 261, 419, 624, 747, 1071, 1166, 1355, 1404
Alw21I GWGCWC 1 cut(s) 421
Alw26I GTCTC 1 cut(s) 1166
AlwI GGATC 3 cut(s) 280, 1073, 1271
Ama87I CYCGRG 2 cut(s) 481, 858
AoxI GGCC 6 cut(s) 768, 1051, 1153, 1253, 1386, 1392
ApoI RAATTY 4 cut(s) 124, 685, 997, 1193
AsiGI ACCGGT 1 cut(s) 662
Asp718I GGTACC 2 cut(s) 434, 659
AspS9I GGNCC 3 cut(s) 338, 1253, 1274
AsuC2I CCSGG 1 cut(s) 932
AsuHPI GGTGA 2 cut(s) 20, 121
AvaI CYCGRG 2 cut(s) 481, 858
AvaII GGWCC 2 cut(s) 338, 1274
BaeGI GKGCMC 1 cut(s) 859
BaeI ACNNNNGTAYC 2 cut(s) 776, 809
BanI GGYRCC 2 cut(s) 434, 659
BanII GRGCYC 1 cut(s) 421
BbsI GAAGAC 2 cut(s) 399, 971
Bbv12I GWGCWC 1 cut(s) 421
BccI CCATC 2 cut(s) 647, 724
BceAI ACGGC 3 cut(s) 516, 610, 783
BcgI CGANNNNNNTGC 4 cut(s) 836, 870, 1337, 1371
BciT130I CCWGG 1 cut(s) 270
BciVI GTATCC 1 cut(s) 902
BcnI CCSGG 1 cut(s) 932
BcoDI GTCTC 1 cut(s) 1166
BcuI ACTAGT 1 cut(s) 554
BfaI CTAG 3 cut(s) 332, 410, 555
BfmI CTRYAG 1 cut(s) 973
BfuI GTATCC 1 cut(s) 902
BisI GCNGC 1 cut(s) 1153
BlsI GCNGC 1 cut(s) 1154
Bme1390I CCNGG 2 cut(s) 270, 932
Bme18I GGWCC 2 cut(s) 338, 1274
BmeT110I CYCGRG 2 cut(s) 481, 858
BmgT120I GGNCC 3 cut(s) 338, 1253, 1274
BmiI GGNNCC 3 cut(s) 436, 493, 661
BmrFI CCNGG 2 cut(s) 270, 932
BmsI GCATC 2 cut(s) 623, 1230
BpiI GAAGAC 2 cut(s) 399, 971
BplI GAGNNNNNCTC 6 cut(s) 250, 282, 870, 902, 1038, 1070
Bpu10I CCTNAGC 1 cut(s) 1257
BpuEI CTTGAG 1 cut(s) 405
BpuMI CCSGG 1 cut(s) 932
Bsa29I ATCGAT 2 cut(s) 323, 728
BsaBI GATNNNNATC 2 cut(s) 55, 953
BsaHI GRCGYC 1 cut(s) 1118
BsaJI CCNNGG 5 cut(s) 765, 874, 1035, 1205, 1389
BsaWI WCCGGW 1 cut(s) 662
Bsc4I CCNNNNNNNGG 3 cut(s) 225, 446, 1151
Bse118I RCCGGY 1 cut(s) 662
Bse3DI GCAATG 1 cut(s) 575
Bse8I GATNNNNATC 2 cut(s) 55, 953
BseBI CCWGG 1 cut(s) 270
BseCI ATCGAT 2 cut(s) 323, 728
BseDI CCNNGG 5 cut(s) 765, 874, 1035, 1205, 1389
BseGI GGATG 4 cut(s) 112, 579, 645, 1297
BseJI GATNNNNATC 2 cut(s) 55, 953
BseLI CCNNNNNNNGG 3 cut(s) 225, 446, 1151
BseMI GCAATG 1 cut(s) 575
BseMII CTCAG 2 cut(s) 1190, 1299
BseRI GAGGAG 4 cut(s) 501, 888, 1059, 1062
BseSI GKGCMC 1 cut(s) 859
BseYI CCCAGC 1 cut(s) 350
Bsh1236I CGCG 4 cut(s) 401, 520, 846, 947
Bsh1285I CGRYCG 1 cut(s) 714
BshFI GGCC 6 cut(s) 770, 1053, 1155, 1255, 1388, 1394
BshNI GGYRCC 2 cut(s) 434, 659
BshTI ACCGGT 1 cut(s) 662
BshVI ATCGAT 2 cut(s) 323, 728
BsiEI CGRYCG 1 cut(s) 714
BsiHKAI GWGCWC 1 cut(s) 421
BsiHKCI CYCGRG 2 cut(s) 481, 858
BsiSI CCGG 2 cut(s) 663, 931
BslFI GGGAC 1 cut(s) 947
BslI CCNNNNNNNGG 3 cut(s) 225, 446, 1151
BsmAI GTCTC 1 cut(s) 1166
BsmFI GGGAC 1 cut(s) 947
BsnI GGCC 6 cut(s) 770, 1053, 1155, 1255, 1388, 1394
BsoBI CYCGRG 2 cut(s) 481, 858
Bsp1286I GDGCHC 2 cut(s) 421, 859
Bsp143I GATC 8 cut(s) 50, 202, 272, 324, 387, 477, 1065, 1263
Bsp19I CCATGG 1 cut(s) 1205
BspACI CCGC 5 cut(s) 495, 710, 945, 1152, 1261
BspANI GGCC 6 cut(s) 770, 1053, 1155, 1255, 1388, 1394
BspCNI CTCAG 2 cut(s) 1189, 1300
BspDI ATCGAT 2 cut(s) 323, 728
BspFNI CGCG 4 cut(s) 401, 520, 846, 947
BspHI TCATGA 1 cut(s) 199
BspLI GGNNCC 3 cut(s) 436, 493, 661
BspPI GGATC 3 cut(s) 280, 1073, 1271
BspQI GCTCTTC 1 cut(s) 1371
BspT107I GGYRCC 2 cut(s) 434, 659
BsrDI GCAATG 1 cut(s) 575
BsrFI RCCGGY 1 cut(s) 662
BssAI RCCGGY 1 cut(s) 662
BssECI CCNNGG 5 cut(s) 765, 874, 1035, 1205, 1389
BssMI GATC 8 cut(s) 50, 202, 272, 324, 387, 477, 1065, 1263
BssNI GRCGYC 1 cut(s) 1118
BssT1I CCWWGG 3 cut(s) 874, 1035, 1205
Bst2UI CCWGG 1 cut(s) 270
Bst6I CTCTTC 3 cut(s) 114, 350, 1371
BstACI GRCGYC 1 cut(s) 1118
BstAPI GCANNNNNTGC 1 cut(s) 1186
BstC8I GCNNGC 3 cut(s) 587, 810, 1288
BstDEI CTNAG 6 cut(s) 212, 233, 1176, 1257, 1302, 1308
BstDSI CCRYGG 2 cut(s) 765, 1205
BstF5I GGATG 4 cut(s) 112, 579, 645, 1297
BstFNI CGCG 4 cut(s) 401, 520, 846, 947
BstKTI GATC 8 cut(s) 53, 205, 275, 327, 390, 480, 1068, 1266
BstMAI GTCTC 1 cut(s) 1166
BstMBI GATC 8 cut(s) 50, 202, 272, 324, 387, 477, 1065, 1263
BstMCI CGRYCG 1 cut(s) 714
BstMWI GCNNNNNNNGC 1 cut(s) 1186
BstNI CCWGG 1 cut(s) 270
BstNSI RCATGY 2 cut(s) 989, 1290
BstSCI CCNGG 2 cut(s) 268, 930
BstSFI CTRYAG 1 cut(s) 973
BstSLI GKGCMC 1 cut(s) 859
BstUI CGCG 4 cut(s) 401, 520, 846, 947
BstV2I GAAGAC 2 cut(s) 399, 971
BstXI CCANNNNNNTGG 1 cut(s) 1206
Bsu15I ATCGAT 2 cut(s) 323, 728
BsuI GTATCC 1 cut(s) 902
BsuRI GGCC 6 cut(s) 770, 1053, 1155, 1255, 1388, 1394
BsuTUI ATCGAT 2 cut(s) 323, 728
BtgI CCRYGG 2 cut(s) 765, 1205
BtsCI GGATG 4 cut(s) 112, 579, 645, 1297
BtsIMutI CAGTG 1 cut(s) 91
Cac8I GCNNGC 3 cut(s) 587, 810, 1288
CciI TCATGA 1 cut(s) 199
Cfr10I RCCGGY 1 cut(s) 662
Cfr13I GGNCC 3 cut(s) 338, 1253, 1274
ClaI ATCGAT 2 cut(s) 323, 728
CseI GACGC 5 cut(s) 407, 1107, 1232, 1368, 1434
Csp6I GTAC 3 cut(s) 435, 660, 863
CspAI ACCGGT 1 cut(s) 662
CviAII CATG 9 cut(s) 146, 200, 276, 328, 827, 986, 1108, 1206, 1287
CviQI GTAC 3 cut(s) 435, 660, 863
DdeI CTNAG 6 cut(s) 212, 233, 1176, 1257, 1302, 1308
DpnI GATC 8 cut(s) 52, 204, 274, 326, 389, 479, 1067, 1265
DpnII GATC 8 cut(s) 50, 202, 272, 324, 387, 477, 1065, 1263
DraI TTTAAA 2 cut(s) 633, 796
EaeI YGGCCR 2 cut(s) 1153, 1386
Eam1104I CTCTTC 3 cut(s) 114, 350, 1371
EarI CTCTTC 3 cut(s) 114, 350, 1371
Ecl136II GAGCTC 1 cut(s) 419
Eco130I CCWWGG 3 cut(s) 874, 1035, 1205
Eco147I AGGCCT 1 cut(s) 1053
Eco24I GRGCYC 1 cut(s) 421
Eco47I GGWCC 2 cut(s) 338, 1274
Eco53kI GAGCTC 1 cut(s) 419
Eco57I CTGAAG 1 cut(s) 138
Eco88I CYCGRG 2 cut(s) 481, 858
EcoICRI GAGCTC 1 cut(s) 419
EcoRI GAATTC 1 cut(s) 685
EcoRII CCWGG 1 cut(s) 268
EcoT14I CCWWGG 3 cut(s) 874, 1035, 1205
EcoT38I GRGCYC 1 cut(s) 421
ErhI CCWWGG 3 cut(s) 874, 1035, 1205
FaeI CATG 9 cut(s) 149, 203, 279, 331, 830, 989, 1111, 1209, 1290
FalI AAGNNNNNCTT 2 cut(s) 174, 206
FaqI GGGAC 1 cut(s) 947
FatI CATG 9 cut(s) 145, 199, 275, 327, 826, 985, 1107, 1205, 1286
Fnu4HI GCNGC 1 cut(s) 1153
FokI GGATG 4 cut(s) 119, 586, 632, 1284
FriOI GRGCYC 1 cut(s) 421
Fsp4HI GCNGC 1 cut(s) 1153
FspBI CTAG 3 cut(s) 332, 410, 555
GluI GCNGC 1 cut(s) 1153
GsaI CCCAGC 1 cut(s) 354
HaeIII GGCC 6 cut(s) 770, 1053, 1155, 1255, 1388, 1394
HapII CCGG 2 cut(s) 663, 931
HgaI GACGC 5 cut(s) 407, 1107, 1232, 1368, 1434
Hin1I GRCGYC 1 cut(s) 1118
Hin1II CATG 9 cut(s) 149, 203, 279, 331, 830, 989, 1111, 1209, 1290
HindIII AAGCTT 2 cut(s) 174, 1402
HinfI GANTC 6 cut(s) 41, 187, 425, 642, 823, 1174
HpaII CCGG 2 cut(s) 663, 931
HphI GGTGA 2 cut(s) 20, 121
Hpy188I TCNGA 9 cut(s) 118, 283, 342, 547, 619, 628, 650, 783, 1309
Hpy188III TCNNGA 8 cut(s) 48, 200, 422, 467, 481, 483, 721, 923
Hpy99I CGWCG 4 cut(s) 401, 1248, 1362, 1428
HpyAV CCTTC 2 cut(s) 156, 669
HpyCH4IV ACGT 1 cut(s) 853
HpyCH4V TGCA 3 cut(s) 960, 1286, 1348
HpyF10VI GCNNNNNNNGC 1 cut(s) 1186
HpyF3I CTNAG 6 cut(s) 212, 233, 1176, 1257, 1302, 1308
HpySE526I ACGT 1 cut(s) 853
Hsp92I GRCGYC 1 cut(s) 1118
Hsp92II CATG 9 cut(s) 149, 203, 279, 331, 830, 989, 1111, 1209, 1290
KpnI GGTACC 2 cut(s) 438, 663
Kzo9I GATC 8 cut(s) 50, 202, 272, 324, 387, 477, 1065, 1263
LguI GCTCTTC 1 cut(s) 1371
LweI GCATC 2 cut(s) 623, 1230
MaeI CTAG 3 cut(s) 332, 410, 555
MaeII ACGT 1 cut(s) 853
MaeIII GTNAC 2 cut(s) 148, 1132
MalI GATC 8 cut(s) 52, 204, 274, 326, 389, 479, 1067, 1265
MboI GATC 8 cut(s) 50, 202, 272, 324, 387, 477, 1065, 1263
MboII GAAGA 9 cut(s) 36, 50, 131, 182, 367, 404, 971, 1001, 1388
MfeI CAATTG 1 cut(s) 1089
MhlI GDGCHC 2 cut(s) 421, 859
MluCI AATT 7 cut(s) 124, 133, 685, 997, 1089, 1160, 1193
MluI ACGCGT 2 cut(s) 399, 518
MlyI GAGTC 3 cut(s) 636, 817, 1168
MseI TTAA 9 cut(s) 102, 369, 632, 705, 774, 795, 1191, 1211, 1269
MslI CAYNNNNRTG 1 cut(s) 557
MspI CCGG 2 cut(s) 663, 931
MspR9I CCNGG 2 cut(s) 270, 932
MunI CAATTG 1 cut(s) 1089
MvaI CCWGG 1 cut(s) 270
MvnI CGCG 4 cut(s) 401, 520, 846, 947
MwoI GCNNNNNNNGC 1 cut(s) 1186
NciI CCSGG 1 cut(s) 932
NcoI CCATGG 1 cut(s) 1205
NdeII GATC 8 cut(s) 50, 202, 272, 324, 387, 477, 1065, 1263
NlaIII CATG 9 cut(s) 149, 203, 279, 331, 830, 989, 1111, 1209, 1290
NlaIV GGNNCC 3 cut(s) 436, 493, 661
NmeAIII GCCGAG 1 cut(s) 1414
NspI RCATGY 2 cut(s) 989, 1290
PaeI GCATGC 1 cut(s) 1290
PaeR7I CTCGAG 1 cut(s) 481
PagI TCATGA 1 cut(s) 199
PceI AGGCCT 1 cut(s) 1053
PciSI GCTCTTC 1 cut(s) 1371
PcsI WCGNNNNNNNCGW 1 cut(s) 850
PfeI GAWTC 3 cut(s) 41, 187, 425
PfoI TCCNGGA 1 cut(s) 268
PinAI ACCGGT 1 cut(s) 662
PkrI GCNGC 1 cut(s) 1154
PleI GAGTC 3 cut(s) 636, 817, 1168
PpsI GAGTC 3 cut(s) 636, 817, 1168
Psp124BI GAGCTC 1 cut(s) 421
Psp6I CCWGG 1 cut(s) 268
PspFI CCCAGC 1 cut(s) 350
PspGI CCWGG 1 cut(s) 268
PspN4I GGNNCC 3 cut(s) 436, 493, 661
PspPI GGNCC 3 cut(s) 338, 1253, 1274
RsaI GTAC 3 cut(s) 436, 661, 864
RsaNI GTAC 3 cut(s) 435, 660, 863
RseI CAYNNNNRTG 1 cut(s) 557
SacI GAGCTC 1 cut(s) 421
SapI GCTCTTC 1 cut(s) 1371
SaqAI TTAA 9 cut(s) 102, 369, 632, 705, 774, 795, 1191, 1211, 1269
SatI GCNGC 1 cut(s) 1153
Sau3AI GATC 8 cut(s) 50, 202, 272, 324, 387, 477, 1065, 1263
Sau96I GGNCC 3 cut(s) 338, 1253, 1274
SchI GAGTC 3 cut(s) 636, 817, 1168
ScrFI CCNGG 2 cut(s) 270, 932
SduI GDGCHC 2 cut(s) 421, 859
SfaNI GCATC 2 cut(s) 623, 1230
SfcI CTRYAG 1 cut(s) 973
Sfr274I CTCGAG 1 cut(s) 481
SinI GGWCC 2 cut(s) 338, 1274
SlaI CTCGAG 1 cut(s) 481
SmiMI CAYNNNNRTG 1 cut(s) 557
SmlI CTYRAG 2 cut(s) 420, 481
SmoI CTYRAG 2 cut(s) 420, 481
SpeI ACTAGT 1 cut(s) 554
SphI GCATGC 1 cut(s) 1290
Sse9I AATT 7 cut(s) 124, 133, 685, 997, 1089, 1160, 1193
SseBI AGGCCT 1 cut(s) 1053
SsiI CCGC 5 cut(s) 495, 710, 945, 1152, 1261
SspI AATATT 1 cut(s) 307
SspMI CTAG 3 cut(s) 332, 410, 555
SstI GAGCTC 1 cut(s) 421
StuI AGGCCT 1 cut(s) 1053
StyD4I CCNGG 2 cut(s) 268, 930
StyI CCWWGG 3 cut(s) 874, 1035, 1205
TaiI ACGT 1 cut(s) 856
TaqI TCGA 9 cut(s) 323, 390, 482, 689, 714, 728, 755, 1357, 1423
TasI AATT 7 cut(s) 124, 133, 685, 997, 1089, 1160, 1193
TauI GCSGC 1 cut(s) 1155
TfiI GAWTC 3 cut(s) 41, 187, 425
Tru1I TTAA 9 cut(s) 102, 369, 632, 705, 774, 795, 1191, 1211, 1269
Tru9I TTAA 9 cut(s) 102, 369, 632, 705, 774, 795, 1191, 1211, 1269
TscAI CASTG 1 cut(s) 91
TspDTI ATGAA 3 cut(s) 51, 489, 1096
TspGWI ACGGA 1 cut(s) 241
TspRI CASTG 1 cut(s) 91
VpaK11BI GGWCC 2 cut(s) 338, 1274
XapI RAATTY 4 cut(s) 124, 685, 997, 1193
XceI RCATGY 2 cut(s) 989, 1290
XcmI CCANNNNNNNNNTGG 1 cut(s) 1407
XhoI CTCGAG 1 cut(s) 481
XspI CTAG 3 cut(s) 332, 410, 555
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.