P-loop containing nucleoside triphosphate hydrolases superfamily protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G13030 AT4G13030 AT4G13030 |
| fragaria_vesca | FvH4_2g18360 FvH4_2g18360 FvH4_2g18361 |
| malus_domestica | MD05G1169200.v1.1 MD10G1157500.v1.1 |
| prunus_persica | Prupe.8G196400_v2.0.a1 Prupe.8G196400_v2.0.a1 |
| pyrus_communis | pycom05g15680 pycom10g13600 |
| rosa_chinensis | RchiOBHm_Chr6g0283741 |
| rosa_laevigata | RLG00000012802 |
| rosa_multiflora | Rmu_sc0001521.1_g000011 |
| rosa_roxburghii | Rroxscaffold_7G00185220 |
| rosa_rugosa | Rorug06G0157400 Rorug06G0157500 |
| rosa_samantha | Rh6AG269400 Rh6AG269500 Rh6BG271700 Rh6CG271700 Rh6CG271800 Rh6DG265500 |
| rosa_wichuraiana | Rw6G023300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 2 cut(s) | 434, 659 |
| AccB1I | GGYRCC | 2 cut(s) | 434, 659 |
| AccII | CGCG | 4 cut(s) | 401, 520, 846, 947 |
| AciI | CCGC | 5 cut(s) | 495, 710, 945, 1152, 1261 |
| AclWI | GGATC | 3 cut(s) | 280, 1073, 1271 |
| AcoI | YGGCCR | 2 cut(s) | 1153, 1386 |
| AcsI | RAATTY | 4 cut(s) | 124, 685, 997, 1193 |
| AcuI | CTGAAG | 1 cut(s) | 138 |
| AcyI | GRCGYC | 1 cut(s) | 1118 |
| AfaI | GTAC | 3 cut(s) | 436, 661, 864 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 225, 446, 1151 |
| AflIII | ACRYGT | 2 cut(s) | 399, 518 |
| AgeI | ACCGGT | 1 cut(s) | 662 |
| AgsI | TTSAA | 7 cut(s) | 19, 48, 194, 724, 983, 1295, 1372 |
| AhlI | ACTAGT | 1 cut(s) | 554 |
| AjnI | CCWGG | 1 cut(s) | 268 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 174, 206, 1007, 1039 |
| AluBI | AGCT | 9 cut(s) | 176, 261, 419, 624, 747, 1071, 1166, 1355, 1404 |
| AluI | AGCT | 9 cut(s) | 176, 261, 419, 624, 747, 1071, 1166, 1355, 1404 |
| Alw21I | GWGCWC | 1 cut(s) | 421 |
| Alw26I | GTCTC | 1 cut(s) | 1166 |
| AlwI | GGATC | 3 cut(s) | 280, 1073, 1271 |
| Ama87I | CYCGRG | 2 cut(s) | 481, 858 |
| AoxI | GGCC | 6 cut(s) | 768, 1051, 1153, 1253, 1386, 1392 |
| ApoI | RAATTY | 4 cut(s) | 124, 685, 997, 1193 |
| AsiGI | ACCGGT | 1 cut(s) | 662 |
| Asp718I | GGTACC | 2 cut(s) | 434, 659 |
| AspS9I | GGNCC | 3 cut(s) | 338, 1253, 1274 |
| AsuC2I | CCSGG | 1 cut(s) | 932 |
| AsuHPI | GGTGA | 2 cut(s) | 20, 121 |
| AvaI | CYCGRG | 2 cut(s) | 481, 858 |
| AvaII | GGWCC | 2 cut(s) | 338, 1274 |
| BaeGI | GKGCMC | 1 cut(s) | 859 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 776, 809 |
| BanI | GGYRCC | 2 cut(s) | 434, 659 |
| BanII | GRGCYC | 1 cut(s) | 421 |
| BbsI | GAAGAC | 2 cut(s) | 399, 971 |
| Bbv12I | GWGCWC | 1 cut(s) | 421 |
| BccI | CCATC | 2 cut(s) | 647, 724 |
| BceAI | ACGGC | 3 cut(s) | 516, 610, 783 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 836, 870, 1337, 1371 |
| BciT130I | CCWGG | 1 cut(s) | 270 |
| BciVI | GTATCC | 1 cut(s) | 902 |
| BcnI | CCSGG | 1 cut(s) | 932 |
| BcoDI | GTCTC | 1 cut(s) | 1166 |
| BcuI | ACTAGT | 1 cut(s) | 554 |
| BfaI | CTAG | 3 cut(s) | 332, 410, 555 |
| BfmI | CTRYAG | 1 cut(s) | 973 |
| BfuI | GTATCC | 1 cut(s) | 902 |
| BisI | GCNGC | 1 cut(s) | 1153 |
| BlsI | GCNGC | 1 cut(s) | 1154 |
| Bme1390I | CCNGG | 2 cut(s) | 270, 932 |
| Bme18I | GGWCC | 2 cut(s) | 338, 1274 |
| BmeT110I | CYCGRG | 2 cut(s) | 481, 858 |
| BmgT120I | GGNCC | 3 cut(s) | 338, 1253, 1274 |
| BmiI | GGNNCC | 3 cut(s) | 436, 493, 661 |
| BmrFI | CCNGG | 2 cut(s) | 270, 932 |
| BmsI | GCATC | 2 cut(s) | 623, 1230 |
| BpiI | GAAGAC | 2 cut(s) | 399, 971 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 250, 282, 870, 902, 1038, 1070 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1257 |
| BpuEI | CTTGAG | 1 cut(s) | 405 |
| BpuMI | CCSGG | 1 cut(s) | 932 |
| Bsa29I | ATCGAT | 2 cut(s) | 323, 728 |
| BsaBI | GATNNNNATC | 2 cut(s) | 55, 953 |
| BsaHI | GRCGYC | 1 cut(s) | 1118 |
| BsaJI | CCNNGG | 5 cut(s) | 765, 874, 1035, 1205, 1389 |
| BsaWI | WCCGGW | 1 cut(s) | 662 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 225, 446, 1151 |
| Bse118I | RCCGGY | 1 cut(s) | 662 |
| Bse3DI | GCAATG | 1 cut(s) | 575 |
| Bse8I | GATNNNNATC | 2 cut(s) | 55, 953 |
| BseBI | CCWGG | 1 cut(s) | 270 |
| BseCI | ATCGAT | 2 cut(s) | 323, 728 |
| BseDI | CCNNGG | 5 cut(s) | 765, 874, 1035, 1205, 1389 |
| BseGI | GGATG | 4 cut(s) | 112, 579, 645, 1297 |
| BseJI | GATNNNNATC | 2 cut(s) | 55, 953 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 225, 446, 1151 |
| BseMI | GCAATG | 1 cut(s) | 575 |
| BseMII | CTCAG | 2 cut(s) | 1190, 1299 |
| BseRI | GAGGAG | 4 cut(s) | 501, 888, 1059, 1062 |
| BseSI | GKGCMC | 1 cut(s) | 859 |
| BseYI | CCCAGC | 1 cut(s) | 350 |
| Bsh1236I | CGCG | 4 cut(s) | 401, 520, 846, 947 |
| Bsh1285I | CGRYCG | 1 cut(s) | 714 |
| BshFI | GGCC | 6 cut(s) | 770, 1053, 1155, 1255, 1388, 1394 |
| BshNI | GGYRCC | 2 cut(s) | 434, 659 |
| BshTI | ACCGGT | 1 cut(s) | 662 |
| BshVI | ATCGAT | 2 cut(s) | 323, 728 |
| BsiEI | CGRYCG | 1 cut(s) | 714 |
| BsiHKAI | GWGCWC | 1 cut(s) | 421 |
| BsiHKCI | CYCGRG | 2 cut(s) | 481, 858 |
| BsiSI | CCGG | 2 cut(s) | 663, 931 |
| BslFI | GGGAC | 1 cut(s) | 947 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 225, 446, 1151 |
| BsmAI | GTCTC | 1 cut(s) | 1166 |
| BsmFI | GGGAC | 1 cut(s) | 947 |
| BsnI | GGCC | 6 cut(s) | 770, 1053, 1155, 1255, 1388, 1394 |
| BsoBI | CYCGRG | 2 cut(s) | 481, 858 |
| Bsp1286I | GDGCHC | 2 cut(s) | 421, 859 |
| Bsp143I | GATC | 8 cut(s) | 50, 202, 272, 324, 387, 477, 1065, 1263 |
| Bsp19I | CCATGG | 1 cut(s) | 1205 |
| BspACI | CCGC | 5 cut(s) | 495, 710, 945, 1152, 1261 |
| BspANI | GGCC | 6 cut(s) | 770, 1053, 1155, 1255, 1388, 1394 |
| BspCNI | CTCAG | 2 cut(s) | 1189, 1300 |
| BspDI | ATCGAT | 2 cut(s) | 323, 728 |
| BspFNI | CGCG | 4 cut(s) | 401, 520, 846, 947 |
| BspHI | TCATGA | 1 cut(s) | 199 |
| BspLI | GGNNCC | 3 cut(s) | 436, 493, 661 |
| BspPI | GGATC | 3 cut(s) | 280, 1073, 1271 |
| BspQI | GCTCTTC | 1 cut(s) | 1371 |
| BspT107I | GGYRCC | 2 cut(s) | 434, 659 |
| BsrDI | GCAATG | 1 cut(s) | 575 |
| BsrFI | RCCGGY | 1 cut(s) | 662 |
| BssAI | RCCGGY | 1 cut(s) | 662 |
| BssECI | CCNNGG | 5 cut(s) | 765, 874, 1035, 1205, 1389 |
| BssMI | GATC | 8 cut(s) | 50, 202, 272, 324, 387, 477, 1065, 1263 |
| BssNI | GRCGYC | 1 cut(s) | 1118 |
| BssT1I | CCWWGG | 3 cut(s) | 874, 1035, 1205 |
| Bst2UI | CCWGG | 1 cut(s) | 270 |
| Bst6I | CTCTTC | 3 cut(s) | 114, 350, 1371 |
| BstACI | GRCGYC | 1 cut(s) | 1118 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1186 |
| BstC8I | GCNNGC | 3 cut(s) | 587, 810, 1288 |
| BstDEI | CTNAG | 6 cut(s) | 212, 233, 1176, 1257, 1302, 1308 |
| BstDSI | CCRYGG | 2 cut(s) | 765, 1205 |
| BstF5I | GGATG | 4 cut(s) | 112, 579, 645, 1297 |
| BstFNI | CGCG | 4 cut(s) | 401, 520, 846, 947 |
| BstKTI | GATC | 8 cut(s) | 53, 205, 275, 327, 390, 480, 1068, 1266 |
| BstMAI | GTCTC | 1 cut(s) | 1166 |
| BstMBI | GATC | 8 cut(s) | 50, 202, 272, 324, 387, 477, 1065, 1263 |
| BstMCI | CGRYCG | 1 cut(s) | 714 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1186 |
| BstNI | CCWGG | 1 cut(s) | 270 |
| BstNSI | RCATGY | 2 cut(s) | 989, 1290 |
| BstSCI | CCNGG | 2 cut(s) | 268, 930 |
| BstSFI | CTRYAG | 1 cut(s) | 973 |
| BstSLI | GKGCMC | 1 cut(s) | 859 |
| BstUI | CGCG | 4 cut(s) | 401, 520, 846, 947 |
| BstV2I | GAAGAC | 2 cut(s) | 399, 971 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1206 |
| Bsu15I | ATCGAT | 2 cut(s) | 323, 728 |
| BsuI | GTATCC | 1 cut(s) | 902 |
| BsuRI | GGCC | 6 cut(s) | 770, 1053, 1155, 1255, 1388, 1394 |
| BsuTUI | ATCGAT | 2 cut(s) | 323, 728 |
| BtgI | CCRYGG | 2 cut(s) | 765, 1205 |
| BtsCI | GGATG | 4 cut(s) | 112, 579, 645, 1297 |
| BtsIMutI | CAGTG | 1 cut(s) | 91 |
| Cac8I | GCNNGC | 3 cut(s) | 587, 810, 1288 |
| CciI | TCATGA | 1 cut(s) | 199 |
| Cfr10I | RCCGGY | 1 cut(s) | 662 |
| Cfr13I | GGNCC | 3 cut(s) | 338, 1253, 1274 |
| ClaI | ATCGAT | 2 cut(s) | 323, 728 |
| CseI | GACGC | 5 cut(s) | 407, 1107, 1232, 1368, 1434 |
| Csp6I | GTAC | 3 cut(s) | 435, 660, 863 |
| CspAI | ACCGGT | 1 cut(s) | 662 |
| CviAII | CATG | 9 cut(s) | 146, 200, 276, 328, 827, 986, 1108, 1206, 1287 |
| CviQI | GTAC | 3 cut(s) | 435, 660, 863 |
| DdeI | CTNAG | 6 cut(s) | 212, 233, 1176, 1257, 1302, 1308 |
| DpnI | GATC | 8 cut(s) | 52, 204, 274, 326, 389, 479, 1067, 1265 |
| DpnII | GATC | 8 cut(s) | 50, 202, 272, 324, 387, 477, 1065, 1263 |
| DraI | TTTAAA | 2 cut(s) | 633, 796 |
| EaeI | YGGCCR | 2 cut(s) | 1153, 1386 |
| Eam1104I | CTCTTC | 3 cut(s) | 114, 350, 1371 |
| EarI | CTCTTC | 3 cut(s) | 114, 350, 1371 |
| Ecl136II | GAGCTC | 1 cut(s) | 419 |
| Eco130I | CCWWGG | 3 cut(s) | 874, 1035, 1205 |
| Eco147I | AGGCCT | 1 cut(s) | 1053 |
| Eco24I | GRGCYC | 1 cut(s) | 421 |
| Eco47I | GGWCC | 2 cut(s) | 338, 1274 |
| Eco53kI | GAGCTC | 1 cut(s) | 419 |
| Eco57I | CTGAAG | 1 cut(s) | 138 |
| Eco88I | CYCGRG | 2 cut(s) | 481, 858 |
| EcoICRI | GAGCTC | 1 cut(s) | 419 |
| EcoRI | GAATTC | 1 cut(s) | 685 |
| EcoRII | CCWGG | 1 cut(s) | 268 |
| EcoT14I | CCWWGG | 3 cut(s) | 874, 1035, 1205 |
| EcoT38I | GRGCYC | 1 cut(s) | 421 |
| ErhI | CCWWGG | 3 cut(s) | 874, 1035, 1205 |
| FaeI | CATG | 9 cut(s) | 149, 203, 279, 331, 830, 989, 1111, 1209, 1290 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 174, 206 |
| FaqI | GGGAC | 1 cut(s) | 947 |
| FatI | CATG | 9 cut(s) | 145, 199, 275, 327, 826, 985, 1107, 1205, 1286 |
| Fnu4HI | GCNGC | 1 cut(s) | 1153 |
| FokI | GGATG | 4 cut(s) | 119, 586, 632, 1284 |
| FriOI | GRGCYC | 1 cut(s) | 421 |
| Fsp4HI | GCNGC | 1 cut(s) | 1153 |
| FspBI | CTAG | 3 cut(s) | 332, 410, 555 |
| GluI | GCNGC | 1 cut(s) | 1153 |
| GsaI | CCCAGC | 1 cut(s) | 354 |
| HaeIII | GGCC | 6 cut(s) | 770, 1053, 1155, 1255, 1388, 1394 |
| HapII | CCGG | 2 cut(s) | 663, 931 |
| HgaI | GACGC | 5 cut(s) | 407, 1107, 1232, 1368, 1434 |
| Hin1I | GRCGYC | 1 cut(s) | 1118 |
| Hin1II | CATG | 9 cut(s) | 149, 203, 279, 331, 830, 989, 1111, 1209, 1290 |
| HindIII | AAGCTT | 2 cut(s) | 174, 1402 |
| HinfI | GANTC | 6 cut(s) | 41, 187, 425, 642, 823, 1174 |
| HpaII | CCGG | 2 cut(s) | 663, 931 |
| HphI | GGTGA | 2 cut(s) | 20, 121 |
| Hpy188I | TCNGA | 9 cut(s) | 118, 283, 342, 547, 619, 628, 650, 783, 1309 |
| Hpy188III | TCNNGA | 8 cut(s) | 48, 200, 422, 467, 481, 483, 721, 923 |
| Hpy99I | CGWCG | 4 cut(s) | 401, 1248, 1362, 1428 |
| HpyAV | CCTTC | 2 cut(s) | 156, 669 |
| HpyCH4IV | ACGT | 1 cut(s) | 853 |
| HpyCH4V | TGCA | 3 cut(s) | 960, 1286, 1348 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1186 |
| HpyF3I | CTNAG | 6 cut(s) | 212, 233, 1176, 1257, 1302, 1308 |
| HpySE526I | ACGT | 1 cut(s) | 853 |
| Hsp92I | GRCGYC | 1 cut(s) | 1118 |
| Hsp92II | CATG | 9 cut(s) | 149, 203, 279, 331, 830, 989, 1111, 1209, 1290 |
| KpnI | GGTACC | 2 cut(s) | 438, 663 |
| Kzo9I | GATC | 8 cut(s) | 50, 202, 272, 324, 387, 477, 1065, 1263 |
| LguI | GCTCTTC | 1 cut(s) | 1371 |
| LweI | GCATC | 2 cut(s) | 623, 1230 |
| MaeI | CTAG | 3 cut(s) | 332, 410, 555 |
| MaeII | ACGT | 1 cut(s) | 853 |
| MaeIII | GTNAC | 2 cut(s) | 148, 1132 |
| MalI | GATC | 8 cut(s) | 52, 204, 274, 326, 389, 479, 1067, 1265 |
| MboI | GATC | 8 cut(s) | 50, 202, 272, 324, 387, 477, 1065, 1263 |
| MboII | GAAGA | 9 cut(s) | 36, 50, 131, 182, 367, 404, 971, 1001, 1388 |
| MfeI | CAATTG | 1 cut(s) | 1089 |
| MhlI | GDGCHC | 2 cut(s) | 421, 859 |
| MluCI | AATT | 7 cut(s) | 124, 133, 685, 997, 1089, 1160, 1193 |
| MluI | ACGCGT | 2 cut(s) | 399, 518 |
| MlyI | GAGTC | 3 cut(s) | 636, 817, 1168 |
| MseI | TTAA | 9 cut(s) | 102, 369, 632, 705, 774, 795, 1191, 1211, 1269 |
| MslI | CAYNNNNRTG | 1 cut(s) | 557 |
| MspI | CCGG | 2 cut(s) | 663, 931 |
| MspR9I | CCNGG | 2 cut(s) | 270, 932 |
| MunI | CAATTG | 1 cut(s) | 1089 |
| MvaI | CCWGG | 1 cut(s) | 270 |
| MvnI | CGCG | 4 cut(s) | 401, 520, 846, 947 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1186 |
| NciI | CCSGG | 1 cut(s) | 932 |
| NcoI | CCATGG | 1 cut(s) | 1205 |
| NdeII | GATC | 8 cut(s) | 50, 202, 272, 324, 387, 477, 1065, 1263 |
| NlaIII | CATG | 9 cut(s) | 149, 203, 279, 331, 830, 989, 1111, 1209, 1290 |
| NlaIV | GGNNCC | 3 cut(s) | 436, 493, 661 |
| NmeAIII | GCCGAG | 1 cut(s) | 1414 |
| NspI | RCATGY | 2 cut(s) | 989, 1290 |
| PaeI | GCATGC | 1 cut(s) | 1290 |
| PaeR7I | CTCGAG | 1 cut(s) | 481 |
| PagI | TCATGA | 1 cut(s) | 199 |
| PceI | AGGCCT | 1 cut(s) | 1053 |
| PciSI | GCTCTTC | 1 cut(s) | 1371 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 850 |
| PfeI | GAWTC | 3 cut(s) | 41, 187, 425 |
| PfoI | TCCNGGA | 1 cut(s) | 268 |
| PinAI | ACCGGT | 1 cut(s) | 662 |
| PkrI | GCNGC | 1 cut(s) | 1154 |
| PleI | GAGTC | 3 cut(s) | 636, 817, 1168 |
| PpsI | GAGTC | 3 cut(s) | 636, 817, 1168 |
| Psp124BI | GAGCTC | 1 cut(s) | 421 |
| Psp6I | CCWGG | 1 cut(s) | 268 |
| PspFI | CCCAGC | 1 cut(s) | 350 |
| PspGI | CCWGG | 1 cut(s) | 268 |
| PspN4I | GGNNCC | 3 cut(s) | 436, 493, 661 |
| PspPI | GGNCC | 3 cut(s) | 338, 1253, 1274 |
| RsaI | GTAC | 3 cut(s) | 436, 661, 864 |
| RsaNI | GTAC | 3 cut(s) | 435, 660, 863 |
| RseI | CAYNNNNRTG | 1 cut(s) | 557 |
| SacI | GAGCTC | 1 cut(s) | 421 |
| SapI | GCTCTTC | 1 cut(s) | 1371 |
| SaqAI | TTAA | 9 cut(s) | 102, 369, 632, 705, 774, 795, 1191, 1211, 1269 |
| SatI | GCNGC | 1 cut(s) | 1153 |
| Sau3AI | GATC | 8 cut(s) | 50, 202, 272, 324, 387, 477, 1065, 1263 |
| Sau96I | GGNCC | 3 cut(s) | 338, 1253, 1274 |
| SchI | GAGTC | 3 cut(s) | 636, 817, 1168 |
| ScrFI | CCNGG | 2 cut(s) | 270, 932 |
| SduI | GDGCHC | 2 cut(s) | 421, 859 |
| SfaNI | GCATC | 2 cut(s) | 623, 1230 |
| SfcI | CTRYAG | 1 cut(s) | 973 |
| Sfr274I | CTCGAG | 1 cut(s) | 481 |
| SinI | GGWCC | 2 cut(s) | 338, 1274 |
| SlaI | CTCGAG | 1 cut(s) | 481 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 557 |
| SmlI | CTYRAG | 2 cut(s) | 420, 481 |
| SmoI | CTYRAG | 2 cut(s) | 420, 481 |
| SpeI | ACTAGT | 1 cut(s) | 554 |
| SphI | GCATGC | 1 cut(s) | 1290 |
| Sse9I | AATT | 7 cut(s) | 124, 133, 685, 997, 1089, 1160, 1193 |
| SseBI | AGGCCT | 1 cut(s) | 1053 |
| SsiI | CCGC | 5 cut(s) | 495, 710, 945, 1152, 1261 |
| SspI | AATATT | 1 cut(s) | 307 |
| SspMI | CTAG | 3 cut(s) | 332, 410, 555 |
| SstI | GAGCTC | 1 cut(s) | 421 |
| StuI | AGGCCT | 1 cut(s) | 1053 |
| StyD4I | CCNGG | 2 cut(s) | 268, 930 |
| StyI | CCWWGG | 3 cut(s) | 874, 1035, 1205 |
| TaiI | ACGT | 1 cut(s) | 856 |
| TaqI | TCGA | 9 cut(s) | 323, 390, 482, 689, 714, 728, 755, 1357, 1423 |
| TasI | AATT | 7 cut(s) | 124, 133, 685, 997, 1089, 1160, 1193 |
| TauI | GCSGC | 1 cut(s) | 1155 |
| TfiI | GAWTC | 3 cut(s) | 41, 187, 425 |
| Tru1I | TTAA | 9 cut(s) | 102, 369, 632, 705, 774, 795, 1191, 1211, 1269 |
| Tru9I | TTAA | 9 cut(s) | 102, 369, 632, 705, 774, 795, 1191, 1211, 1269 |
| TscAI | CASTG | 1 cut(s) | 91 |
| TspDTI | ATGAA | 3 cut(s) | 51, 489, 1096 |
| TspGWI | ACGGA | 1 cut(s) | 241 |
| TspRI | CASTG | 1 cut(s) | 91 |
| VpaK11BI | GGWCC | 2 cut(s) | 338, 1274 |
| XapI | RAATTY | 4 cut(s) | 124, 685, 997, 1193 |
| XceI | RCATGY | 2 cut(s) | 989, 1290 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1407 |
| XhoI | CTCGAG | 1 cut(s) | 481 |
| XspI | CTAG | 3 cut(s) | 332, 410, 555 |