Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001521.1

Orthogroup ID

OG0006980

Physical Location & Seq

Genomic Coordinates Forward (+)

29131 .. 38110

Gene Structure 8980 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001521.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3252 bp

atggagagatataaaattttggaggaacttggtgatggcacttgtggtagtgtatataaggctcgtgattggagatcaaatgagattgttgctgtcaagaagatgaagagaaagttctttttctgggaagaatactggagattgcgagagattaaggtccttcgcaaactaaatcatccaaatattataaagttaaaggaggtgattagggaaaacaacgaggtgttcctcatttttgagtacatgaactataatttgtatgaaataatgaaagaacgacaaagacccttttcagaggatgaaattaggagctttatgtctcaactgctggatgggcttaatcatatgcatagaaggggatattttcaccgagatctaaaaccagagaatttactggtgacaaacgatattcttaaagttgctgattttggattggctagagaagtgtcatcaatgcctccatatactgaatatgtttccacacgctggtatcgagcaccggaagtcctgttgcaggccaaatcatattctcctgcagttgacatgtgggcagcgggtgcaatcctagctgaacttttcactttgtcccctattttccctggtgaaagtgaaatagatcagctgtacaagattttctgtgtacttggtacaccagacttgacaatcttccctgaagggacaaatatatctcgattatttagcattgtcaattttgaaaagatcttgcctgcaaatctctctgatatcattccaaatgcaagcgcagaggctattgatttgataatgaaactatgctcatgggacccatcaaagaggccaactgcagatgaaacattacaacatccctttttccatgtggtttggattcctcgttcactgcgtgatccacttgacctgaagctaagtaacataggggcaaagccaacacttgagttgaaactgtcggactttggtgctgaacctgaggactgctttcttggcttgacgttggctgtgaagcccagtgttccagacttcgatgtggttcatgatgtgtctcagaatatggaagaggatacattattttgctctggtttggaagatcattcaggacggtccgttttttggtctctaatgcctactgatcaaggtggaatatgtgccccagttgagccttcgttttctttgtcattcagttcaatacaacatccatcagtcagagttccacaatcagctgggttctccatgccttctttgcagtctaacattgtagatggtccattattggccatgtcttctcccttcccgcaaagcgacatgggtggcggtataaccattcctcctgataacacaacgggggaaaaagactcctccctggaccaggattctacccaactatcgtctccacttctcagaagtgaattgagcatgggggctgaggagggtgcagtggataaacaaagtcagagtggttcggtgtttggagactatggcagactgcgtgatttggacgccaatgagaggatgagggaaaatgtttataggaaaattatgcagagtggtgagttattggggattcgaggcaaatcgaaagaggctaaggacaaaataatgagctacacccctggggcatggattgagactgcaggtgccatgaaaaggagggactatgatgtgccaaagacgactactctattgttggttggtccaaaaggatctggaaagagtagtcttattaacagaatatcaaaggtgcttgaagatgacaagtttgcatcagaaagagcacaagtctcatacaattcatctattggagatggaacccttttcctccaggaatgtatgataccaagaggttcaacttcattttgcatctatgatactcgtagtctgtctgacgattcagctgaaaacataaaaatgctgaagcattggatggaaaatggtgttcgtcatggggagcttgctattagggattcagacagtcaaagtttgaggactgcgatgatgtgcaaagctcatgacaatgatcatctttccagtgcgatcaggaaggttaactttgtcatatttgctgttaatggcctttcagttctgaaagcactggaaagtgaggaagatgcagagactcaatacactcgaatgattgcttccatgttcaactgcccatacttggcatttaaagatgataaacctgctgttgttgtcactcatggtgatctactttcacatgacgaacgtgctcgtgttcgtgtccatttgggagaactattgggtattccacctacaacccaaatatttgacatcccagaaagcagtgacccagtaactgagtccacaacaattgacatgttacgctattcgcttgagcatgctgataaaaattttactcataagaaaaaggttcctgctatatcactactaccatttatgctcctgttaatgcttcttggaactgccaccaatttatggtgtatgtatcatcatgcacatattcagcagggtcctgcaaccctaccggctattcagcactgtcagtgtccccaagcgcatattcaacactgtcctttgccccaagctcgtattcagcatgaccgtggcccttttaccgaagaacataatcagaaagaacctttgcctgaagaatacatgcagaaagaacctttgcccgaagaatacattcagaaggaactacaagaccctttgccccaagctttgccccaagaccaggttcagcaagacctatttcgccaagaccaagttcagcaaggccctttgccccaagaccatgttcagcaagaccctttcccccaaatgcatgttcagcactgcacttctccagaaggtcatgttcagcacgattgtggccctttgcccaaaattcttactcagcacagcccttcaccctctttggccacttcaaccccttcaccccttgcggctccttcgaccccttcagtcccttctgctcatgaggatggctccttgccctcttctccccaaacacatgttcatcctgacccttcaccctctaatccctcatccccgcaaactccacttcatggtcctttgcctcgagtgcaagcagaacttgagaaaattaaaactaaagttgagaaatttaggacaaaacttgattggagtaaaatccgtcatttgtatctagatgaagattcgaagatgcatatagactggacgaagattcgacacttgtatctagatgaagattccaagtattggaagaaaattcgtcatttgtatcgagatgactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04068 ko04110 ko04114 ko04115 ko04151 ko04218 ko04914 ko04934 ko05161 ko05162 ko05165 ko05168 ko05169 ko05200 ko05203 ko05215 ko05222 ko05226 map04068 map04110 map04114 map04115 map04151 map04218 map04914 map04934 map05161 map05162 map05165 map05168 map05169 map05200 map05203 map05215 map05222 map05226

Pfam Domains

Protein Families

Pkinase

Protein Analysis

1083

Amino Acids

122.49

Weight (kDa)

5.69

Isoelectric Point (pI)

54.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006980)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G13030 AT4G13030 AT4G13030
fragaria_vesca	FvH4_2g18360 FvH4_2g18360 FvH4_2g18361
malus_domestica	MD05G1169200.v1.1 MD10G1157500.v1.1
prunus_persica	Prupe.8G196400_v2.0.a1 Prupe.8G196400_v2.0.a1
pyrus_communis	pycom05g15680 pycom10g13600
rosa_chinensis	RchiOBHm_Chr6g0283741
rosa_laevigata	RLG00000012802
rosa_multiflora	Rmu_sc0001521.1_g000011
rosa_roxburghii	Rroxscaffold_7G00185220
rosa_rugosa	Rorug06G0157400 Rorug06G0157500
rosa_samantha	Rh6AG269400 Rh6AG269500 Rh6BG271700 Rh6CG271700 Rh6CG271800 Rh6DG265500
rosa_wichuraiana	Rw6G023300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	188
AarI	CACCTGC	1 cut(s)	1616
Acc36I	ACCTGC	2 cut(s)	1616, 2182
AccB1I	GGYRCC	1 cut(s)	1628
AccB7I	CCANNNNNTGG	4 cut(s)	486, 2448, 3041, 3216
AciI	CCGC	5 cut(s)	554, 1286, 1305, 2918, 3026
AclWI	GGATC	2 cut(s)	878, 1702
AcoI	YGGCCR	2 cut(s)	1266, 2892
AcsI	RAATTY	6 cut(s)	15, 388, 2362, 2859, 3098, 3225
AcuI	CTGAAG	5 cut(s)	693, 917, 1925, 2640, 2919
AcyI	GRCGYC	1 cut(s)	1491
AdeI	CACNNNGTG	1 cut(s)	881
AfaI	GTAC	4 cut(s)	242, 626, 642, 649
AflIII	ACRYGT	3 cut(s)	543, 2328, 2986
AgsI	TTSAA	8 cut(s)	716, 937, 1179, 1739, 1839, 2140, 2537, 2901
AjnI	CCWGG	6 cut(s)	598, 1353, 1359, 1603, 1812, 2706
AleI	CACNNNNGTG	1 cut(s)	2841
AloI	GAACNNNNNNTCC	2 cut(s)	856, 888
Alw21I	GWGCWC	3 cut(s)	499, 1768, 2224
Alw26I	GTCTC	8 cut(s)	324, 1041, 1113, 1386, 1458, 1613, 1777, 2099
AlwI	GGATC	2 cut(s)	878, 1702
AlwNI	CAGNNNCTG	1 cut(s)	2309
Ama87I	CYCGRG	1 cut(s)	3054
AoxI	GGCC	8 cut(s)	516, 815, 1266, 2062, 2578, 2749, 2845, 2892
ApeKI	GCWGC	1 cut(s)	551
ApoI	RAATTY	6 cut(s)	15, 388, 2362, 2859, 3098, 3225
Asp700I	GAANNNNTTC	1 cut(s)	2658
AspLEI	GCGC	2 cut(s)	764, 2530
AsuII	TTCGAA	1 cut(s)	3155
AvaI	CYCGRG	1 cut(s)	3054
AvaII	GGWCC	8 cut(s)	157, 802, 1095, 1256, 1357, 1685, 2483, 3044
AxyI	CCTNAGG	1 cut(s)	963
BaeGI	GKGCMC	1 cut(s)	1144
BaeI	ACNNNNGTAYC	4 cut(s)	473, 506, 3176, 3209
BalI	TGGCCA	2 cut(s)	1268, 2894
BanI	GGYRCC	1 cut(s)	1628
BauI	CACGAG	2 cut(s)	63, 2223
BbsI	GAAGAC	1 cut(s)	1266
Bbv12I	GWGCWC	3 cut(s)	499, 1768, 2224
BbvCI	CCTCAGC	1 cut(s)	1416
BbvI	GCAGC	1 cut(s)	563
BccI	CCATC	8 cut(s)	29, 326, 814, 1198, 1247, 1790, 1909, 2951
BciT130I	CCWGG	6 cut(s)	600, 1355, 1361, 1605, 1814, 2708
BciVI	GTATCC	1 cut(s)	1048
BclI	TGATCA	2 cut(s)	1123, 2008
BcoDI	GTCTC	8 cut(s)	324, 1041, 1113, 1386, 1458, 1613, 1777, 2099
BfaI	CTAG	4 cut(s)	438, 566, 3143, 3197
BfmI	CTRYAG	3 cut(s)	534, 822, 1623
BfuAI	ACCTGC	2 cut(s)	1616, 2182
BfuI	GTATCC	1 cut(s)	1048
BglII	AGATCT	2 cut(s)	373, 720
BisI	GCNGC	2 cut(s)	552, 2919
BlsI	GCNGC	2 cut(s)	553, 2920
Bme1390I	CCNGG	6 cut(s)	600, 1355, 1361, 1605, 1814, 2708
Bme18I	GGWCC	8 cut(s)	157, 802, 1095, 1256, 1357, 1685, 2483, 3044
BmeT110I	CYCGRG	1 cut(s)	3054
BmiI	GGNNCC	8 cut(s)	803, 804, 1630, 1801, 2385, 2484, 2922, 2962
BmrFI	CCNGG	6 cut(s)	600, 1355, 1361, 1605, 1814, 2708
BmrI	ACTGGG	3 cut(s)	996, 1139, 2297
BmsI	GCATC	4 cut(s)	1763, 1860, 2089, 3150
BmuI	ACTGGG	3 cut(s)	996, 1139, 2297
BpiI	GAAGAC	1 cut(s)	1266
BplI	GAGNNNNNCTC	2 cut(s)	2945, 2977
BpmI	CTGGAG	3 cut(s)	157, 1796, 2802
Bpu10I	CCTNAGC	2 cut(s)	1416, 1578
Bpu14I	TTCGAA	1 cut(s)	3155
BpuEI	CTTGAG	3 cut(s)	950, 2366, 3092
BsaHI	GRCGYC	1 cut(s)	1491
BsaI	GGTCTC	1 cut(s)	1113
BsaJI	CCNNGG	5 cut(s)	598, 1353, 1603, 1604, 2575
BsaWI	WCCGGW	1 cut(s)	499
BsaXI	ACNNNNNCTCC	2 cut(s)	1303, 1333
Bse118I	RCCGGY	1 cut(s)	2497
Bse1I	ACTGG	8 cut(s)	140, 399, 1002, 1145, 2019, 2088, 2303, 3176
Bse21I	CCTNAGG	1 cut(s)	963
BseBI	CCWGG	6 cut(s)	600, 1355, 1361, 1605, 1814, 2708
BseDI	CCNNGG	5 cut(s)	598, 1353, 1603, 1604, 2575
BseMII	CTCAG	6 cut(s)	954, 1052, 1405, 1407, 2301, 2882
BseNI	ACTGG	8 cut(s)	140, 399, 1002, 1145, 2019, 2088, 2303, 3176
BseRI	GAGGAG	2 cut(s)	1339, 1433
BseSI	GKGCMC	1 cut(s)	1144
BseXI	GCAGC	1 cut(s)	563
BseYI	CCCAGC	1 cut(s)	1214
BsgI	GTGCAG	2 cut(s)	1446, 2794
BshFI	GGCC	8 cut(s)	518, 817, 1268, 2064, 2580, 2751, 2847, 2894
BshNI	GGYRCC	1 cut(s)	1628
BsiHKAI	GWGCWC	3 cut(s)	499, 1768, 2224
BsiHKCI	CYCGRG	1 cut(s)	3054
BsiSI	CCGG	2 cut(s)	500, 2498
BslFI	GGGAC	6 cut(s)	571, 691, 815, 1658, 2505, 2924
BsmAI	GTCTC	8 cut(s)	324, 1041, 1113, 1386, 1458, 1613, 1777, 2099
BsmBI	CGTCTC	1 cut(s)	1386
BsmFI	GGGAC	6 cut(s)	571, 691, 815, 1658, 2505, 2924
BsnI	GGCC	8 cut(s)	518, 817, 1268, 2064, 2580, 2751, 2847, 2894
Bso31I	GGTCTC	1 cut(s)	1113
BsoBI	CYCGRG	1 cut(s)	3054
Bsp119I	TTCGAA	1 cut(s)	3155
Bsp1286I	GDGCHC	4 cut(s)	499, 1144, 1768, 2224
Bsp1407I	TGTACA	1 cut(s)	624
BspACI	CCGC	5 cut(s)	554, 1286, 1305, 2918, 3026
BspANI	GGCC	8 cut(s)	518, 817, 1268, 2064, 2580, 2751, 2847, 2894
BspCNI	CTCAG	6 cut(s)	955, 1051, 1404, 1408, 2302, 2881
BspHI	TCATGA	3 cut(s)	1027, 1999, 2950
BspLI	GGNNCC	8 cut(s)	803, 804, 1630, 1801, 2385, 2484, 2922, 2962
BspMAI	CTGCAG	3 cut(s)	538, 826, 1627
BspMI	ACCTGC	2 cut(s)	1616, 2182
BspPI	GGATC	2 cut(s)	878, 1702
BspT104I	TTCGAA	1 cut(s)	3155
BspT107I	GGYRCC	1 cut(s)	1628
BspTNI	GGTCTC	1 cut(s)	1113
BsrFI	RCCGGY	1 cut(s)	2497
BsrGI	TGTACA	1 cut(s)	624
BsrI	ACTGG	8 cut(s)	140, 399, 1002, 1145, 2019, 2088, 2303, 3176
BssAI	RCCGGY	1 cut(s)	2497
BssECI	CCNNGG	5 cut(s)	598, 1353, 1603, 1604, 2575
BssNI	GRCGYC	1 cut(s)	1491
BssSI	CACGAG	2 cut(s)	63, 2223
Bst2BI	CACGAG	2 cut(s)	63, 2223
Bst2UI	CCWGG	6 cut(s)	600, 1355, 1361, 1605, 1814, 2708
Bst4CI	ACNGT	6 cut(s)	942, 1095, 1964, 2513, 2543, 2576
Bst6I	CTCTTC	3 cut(s)	101, 1044, 2977
BstACI	GRCGYC	1 cut(s)	1491
BstAPI	GCANNNNNTGC	1 cut(s)	557
BstAUI	TGTACA	1 cut(s)	624
BstBI	TTCGAA	1 cut(s)	3155
BstC8I	GCNNGC	6 cut(s)	516, 729, 760, 1944, 2352, 3063
BstDEI	CTNAG	8 cut(s)	902, 963, 1038, 1391, 1416, 1578, 2310, 2868
BstDSI	CCRYGG	1 cut(s)	2575
BstENI	CCTNNNNNAGG	2 cut(s)	512, 1358
BstHHI	GCGC	2 cut(s)	764, 2530
BstMAI	GTCTC	8 cut(s)	324, 1041, 1113, 1386, 1458, 1613, 1777, 2099
BstMWI	GCNNNNNNNGC	7 cut(s)	334, 557, 566, 978, 1234, 2803, 3058
BstNI	CCWGG	6 cut(s)	600, 1355, 1361, 1605, 1814, 2708
BstNSI	RCATGY	6 cut(s)	547, 2332, 2354, 2632, 2801, 2990
BstSCI	CCNGG	6 cut(s)	598, 1353, 1359, 1603, 1812, 2706
BstSFI	CTRYAG	3 cut(s)	534, 822, 1623
BstSLI	GKGCMC	1 cut(s)	1144
BstV1I	GCAGC	1 cut(s)	563
BstV2I	GAAGAC	1 cut(s)	1266
BstX2I	RGATCY	3 cut(s)	373, 720, 1694
BstYI	RGATCY	3 cut(s)	373, 720, 1694
Bsu36I	CCTNAGG	1 cut(s)	963
BsuI	GTATCC	1 cut(s)	1048
BsuRI	GGCC	8 cut(s)	518, 817, 1268, 2064, 2580, 2751, 2847, 2894
BtgI	CCRYGG	1 cut(s)	2575
BtgZI	GCGATG	1 cut(s)	1997
BtsI	GCAGTG	4 cut(s)	875, 1434, 2302, 2806
BveI	ACCTGC	2 cut(s)	1616, 2182
Cac8I	GCNNGC	6 cut(s)	516, 729, 760, 1944, 2352, 3063
CaiI	CAGNNNCTG	1 cut(s)	2309
CciI	TCATGA	3 cut(s)	1027, 1999, 2950
CfoI	GCGC	2 cut(s)	764, 2530
Cfr10I	RCCGGY	1 cut(s)	2497
CpoI	CGGWCCG	1 cut(s)	1095
CseI	GACGC	1 cut(s)	1499
CsiI	ACCWGGT	1 cut(s)	2706
Csp6I	GTAC	4 cut(s)	241, 625, 641, 648
CspCI	CAANNNNNGTGG	2 cut(s)	2305, 2340
CspI	CGGWCCG	1 cut(s)	1095
CviQI	GTAC	4 cut(s)	241, 625, 641, 648
DdeI	CTNAG	8 cut(s)	902, 963, 1038, 1391, 1416, 1578, 2310, 2868
DraI	TTTAAA	1 cut(s)	2161
DraIII	CACNNNGTG	1 cut(s)	881
EaeI	YGGCCR	2 cut(s)	1266, 2892
Eam1104I	CTCTTC	3 cut(s)	101, 1044, 2977
EarI	CTCTTC	3 cut(s)	101, 1044, 2977
Eco31I	GGTCTC	1 cut(s)	1113
Eco32I	GATATC	1 cut(s)	745
Eco47I	GGWCC	8 cut(s)	157, 802, 1095, 1256, 1357, 1685, 2483, 3044
Eco57I	CTGAAG	5 cut(s)	693, 917, 1925, 2640, 2919
Eco81I	CCTNAGG	1 cut(s)	963
Eco88I	CYCGRG	1 cut(s)	3054
EcoNI	CCTNNNNNAGG	2 cut(s)	512, 1358
EcoO109I	RGGNCCY	4 cut(s)	157, 802, 2483, 2750
EcoRII	CCWGG	6 cut(s)	598, 1353, 1359, 1603, 1812, 2706
EcoRV	GATATC	1 cut(s)	745
EcoT22I	ATGCAT	3 cut(s)	351, 2799, 3165
Esp3I	CGTCTC	1 cut(s)	1386
FalI	AAGNNNNNCTT	4 cut(s)	2024, 2056, 3054, 3086
FaqI	GGGAC	6 cut(s)	571, 691, 815, 1658, 2505, 2924
FauI	CCCGC	3 cut(s)	547, 1293, 3033
FauNDI	CATATG	1 cut(s)	345
FbaI	TGATCA	2 cut(s)	1123, 2008
Fnu4HI	GCNGC	2 cut(s)	552, 2919
Fsp4HI	GCNGC	2 cut(s)	552, 2919
FspBI	CTAG	4 cut(s)	438, 566, 3143, 3197
GlaI	GCGC	2 cut(s)	763, 2529
GluI	GCNGC	2 cut(s)	552, 2919
GsaI	CCCAGC	1 cut(s)	1218
GsuI	CTGGAG	3 cut(s)	157, 1796, 2802
HaeIII	GGCC	8 cut(s)	518, 817, 1268, 2064, 2580, 2751, 2847, 2894
HapII	CCGG	2 cut(s)	500, 2498
HgaI	GACGC	1 cut(s)	1499
HhaI	GCGC	2 cut(s)	764, 2530
Hin1I	GRCGYC	1 cut(s)	1491
Hin6I	GCGC	2 cut(s)	762, 2528
HinP1I	GCGC	2 cut(s)	762, 2528
HincII	GTYRAC	2 cut(s)	541, 2038
HindII	GTYRAC	2 cut(s)	541, 2038
HindIII	AAGCTT	1 cut(s)	2691
HpaI	GTTAAC	1 cut(s)	2038
HpaII	CCGG	2 cut(s)	500, 2498
Hpy166II	GTNNAC	6 cut(s)	541, 641, 650, 875, 2038, 2316
Hpy8I	GTNNAC	6 cut(s)	541, 641, 650, 875, 2038, 2316
HpyCH4III	ACNGT	6 cut(s)	942, 1095, 1964, 2513, 2543, 2576
HpyCH4IV	ACGT	2 cut(s)	986, 2218
HpyF10VI	GCNNNNNNNGC	7 cut(s)	334, 557, 566, 978, 1234, 2803, 3058
HpyF3I	CTNAG	8 cut(s)	902, 963, 1038, 1391, 1416, 1578, 2310, 2868
HpySE526I	ACGT	2 cut(s)	986, 2218
Hsp92I	GRCGYC	1 cut(s)	1491
HspAI	GCGC	2 cut(s)	762, 2528
KflI	GGGWCCC	1 cut(s)	802
Ksp22I	TGATCA	2 cut(s)	1123, 2008
KspAI	GTTAAC	1 cut(s)	2038
LmnI	GCTCC	5 cut(s)	309, 1939, 2418, 2926, 2966
Lsp1109I	GCAGC	1 cut(s)	563
LweI	GCATC	4 cut(s)	1763, 1860, 2089, 3150
MabI	ACCWGGT	1 cut(s)	2706
MaeI	CTAG	4 cut(s)	438, 566, 3143, 3197
MaeII	ACGT	2 cut(s)	986, 2218
MaeIII	GTNAC	6 cut(s)	397, 905, 2185, 2297, 2305, 2331
MfeI	CAATTG	1 cut(s)	2322
MflI	RGATCY	3 cut(s)	373, 720, 1694
MhlI	GDGCHC	4 cut(s)	499, 1144, 1768, 2224
MlsI	TGGCCA	2 cut(s)	1268, 2894
MluNI	TGGCCA	2 cut(s)	1268, 2894
MlyI	GAGTC	3 cut(s)	1340, 2101, 2321
MmeI	TCCRAC	1 cut(s)	924
Mox20I	TGGCCA	2 cut(s)	1268, 2894
Mph1103I	ATGCAT	3 cut(s)	351, 2799, 3165
MroXI	GAANNNNTTC	1 cut(s)	2658
MscI	TGGCCA	2 cut(s)	1268, 2894
MslI	CAYNNNNRTG	6 cut(s)	1898, 2004, 2120, 2574, 2841, 2955
Msp20I	TGGCCA	2 cut(s)	1268, 2894
MspA1I	CMGCKG	4 cut(s)	554, 622, 1214, 1886
MspI	CCGG	2 cut(s)	500, 2498
MspR9I	CCNGG	6 cut(s)	600, 1355, 1361, 1605, 1814, 2708
MunI	CAATTG	1 cut(s)	2322
MvaI	CCWGG	6 cut(s)	600, 1355, 1361, 1605, 1814, 2708
MwoI	GCNNNNNNNGC	7 cut(s)	334, 557, 566, 978, 1234, 2803, 3058
NdeI	CATATG	1 cut(s)	345
NlaIV	GGNNCC	8 cut(s)	803, 804, 1630, 1801, 2385, 2484, 2922, 2962
NmuCI	GTSAC	3 cut(s)	397, 2185, 2297
NsiI	ATGCAT	3 cut(s)	351, 2799, 3165
NspI	RCATGY	6 cut(s)	547, 2332, 2354, 2632, 2801, 2990
NspV	TTCGAA	1 cut(s)	3155
OliI	CACNNNNGTG	1 cut(s)	2841
PaeI	GCATGC	1 cut(s)	2354
PaeR7I	CTCGAG	1 cut(s)	3054
PagI	TCATGA	3 cut(s)	1027, 1999, 2950
PaqCI	CACCTGC	1 cut(s)	1616
PasI	CCCWGGG	1 cut(s)	1604
PciI	ACATGT	3 cut(s)	543, 2328, 2986
PcsI	WCGNNNNNNNCGW	2 cut(s)	490, 877
PdmI	GAANNNNTTC	1 cut(s)	2658
PfeI	GAWTC	8 cut(s)	865, 1364, 1555, 1880, 1955, 3152, 3181, 3206
PflMI	CCANNNNNTGG	4 cut(s)	486, 2448, 3041, 3216
PfoI	TCCNGGA	1 cut(s)	1812
PkrI	GCNGC	2 cut(s)	553, 2920
PleI	GAGTC	3 cut(s)	1340, 2101, 2320
PpsI	GAGTC	3 cut(s)	1340, 2101, 2320
PpuMI	RGGWCCY	3 cut(s)	157, 802, 2483
PscI	ACATGT	3 cut(s)	543, 2328, 2986
PsiI	TTATAA	1 cut(s)	188
Psp5II	RGGWCCY	3 cut(s)	157, 802, 2483
Psp6I	CCWGG	6 cut(s)	598, 1353, 1359, 1603, 1812, 2706
PspFI	CCCAGC	1 cut(s)	1214
PspGI	CCWGG	6 cut(s)	598, 1353, 1359, 1603, 1812, 2706
PspN4I	GGNNCC	8 cut(s)	803, 804, 1630, 1801, 2385, 2484, 2922, 2962
PspPPI	RGGWCCY	3 cut(s)	157, 802, 2483
PspXI	VCTCGAGB	1 cut(s)	3054
PstI	CTGCAG	3 cut(s)	538, 826, 1627
PstNI	CAGNNNCTG	1 cut(s)	2309
PsuI	RGATCY	3 cut(s)	373, 720, 1694
PvuII	CAGCTG	3 cut(s)	622, 1214, 1886
RsaI	GTAC	4 cut(s)	242, 626, 642, 649
RsaNI	GTAC	4 cut(s)	241, 625, 641, 648
RseI	CAYNNNNRTG	6 cut(s)	1898, 2004, 2120, 2574, 2841, 2955
Rsr2I	CGGWCCG	1 cut(s)	1095
RsrII	CGGWCCG	1 cut(s)	1095
SatI	GCNGC	2 cut(s)	552, 2919
SchI	GAGTC	3 cut(s)	1340, 2101, 2321
ScrFI	CCNGG	6 cut(s)	600, 1355, 1361, 1605, 1814, 2708
SduI	GDGCHC	4 cut(s)	499, 1144, 1768, 2224
SexAI	ACCWGGT	1 cut(s)	2706
SfaNI	GCATC	4 cut(s)	1763, 1860, 2089, 3150
SfcI	CTRYAG	3 cut(s)	534, 822, 1623
Sfr274I	CTCGAG	1 cut(s)	3054
SfuI	TTCGAA	1 cut(s)	3155
SinI	GGWCC	8 cut(s)	157, 802, 1095, 1256, 1357, 1685, 2483, 3044
SlaI	CTCGAG	1 cut(s)	3054
SmiMI	CAYNNNNRTG	6 cut(s)	1898, 2004, 2120, 2574, 2841, 2955
SmlI	CTYRAG	4 cut(s)	929, 2345, 3054, 3071
SmoI	CTYRAG	4 cut(s)	929, 2345, 3054, 3071
SphI	GCATGC	1 cut(s)	2354
SsiI	CCGC	5 cut(s)	554, 1286, 1305, 2918, 3026
SspI	AATATT	2 cut(s)	184, 2277
SspMI	CTAG	4 cut(s)	438, 566, 3143, 3197
StyD4I	CCNGG	6 cut(s)	598, 1353, 1359, 1603, 1812, 2706
TaaI	ACNGT	6 cut(s)	942, 1095, 1964, 2513, 2543, 2576
TaiI	ACGT	2 cut(s)	989, 2221
TatI	WGTACW	3 cut(s)	240, 624, 640
TauI	GCSGC	1 cut(s)	2921
TfiI	GAWTC	8 cut(s)	865, 1364, 1555, 1880, 1955, 3152, 3181, 3206
TseFI	GTSAC	3 cut(s)	397, 2185, 2297
TseI	GCWGC	1 cut(s)	551
Tsp45I	GTSAC	3 cut(s)	397, 2185, 2297
TspGWI	ACGGA	2 cut(s)	1087, 3119
Van91I	CCANNNNNTGG	4 cut(s)	486, 2448, 3041, 3216
VpaK11BI	GGWCC	8 cut(s)	157, 802, 1095, 1256, 1357, 1685, 2483, 3044
XagI	CCTNNNNNAGG	2 cut(s)	512, 1358
XapI	RAATTY	6 cut(s)	15, 388, 2362, 2859, 3098, 3225
XbaI	TCTAGA	2 cut(s)	3142, 3196
XceI	RCATGY	6 cut(s)	547, 2332, 2354, 2632, 2801, 2990
XhoI	CTCGAG	1 cut(s)	3054
XmnI	GAANNNNTTC	1 cut(s)	2658
XspI	CTAG	4 cut(s)	438, 566, 3143, 3197
Zsp2I	ATGCAT	3 cut(s)	351, 2799, 3165

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.