Prolyl oligopeptidase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14570 |
| fragaria_vesca | FvH4_4g02060 FvH4_4g02162 |
| malus_domestica | MD13G1203600.v1.1 MD16G1205300.v1.1 MD16G1205600.v1.1 |
| prunus_persica | Prupe.1G026800_v2.0.a1 |
| pyrus_communis | pycom13g17690 pycom16g17300 pycom16g17310 |
| rosa_chinensis | RchiOBHm_Chr4g0389431 RchiOBHm_Chr4g0389461 |
| rosa_laevigata | RLG00000009980 RLG00000009982 |
| rosa_multiflora | Rmu_sc0002498.1_g000017 |
| rosa_roxburghii | Rroxscaffold_5G00335440 Rroxscaffold_5G00335460 |
| rosa_rugosa | Rorug03G0323200 |
| rosa_samantha | Rh4AG027700 Rh4AG027800 Rh4BG020600 Rh4BG021000 Rh4DG021300 Rh4DG021400 |
| rosa_wichuraiana | Rw4G002010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1862 |
| AccB1I | GGYRCC | 1 cut(s) | 433 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1220 |
| AccI | GTMKAC | 2 cut(s) | 606, 1361 |
| AciI | CCGC | 4 cut(s) | 1098, 1149, 1158, 1410 |
| AclWI | GGATC | 6 cut(s) | 638, 931, 1319, 1751, 1933, 2292 |
| AcoI | YGGCCR | 2 cut(s) | 1211, 2050 |
| AcsI | RAATTY | 8 cut(s) | 550, 730, 870, 1061, 1130, 1399, 1644, 2066 |
| AcuI | CTGAAG | 2 cut(s) | 1619, 1695 |
| AcvI | CACGTG | 1 cut(s) | 1424 |
| AcyI | GRCGYC | 1 cut(s) | 434 |
| AfaI | GTAC | 3 cut(s) | 986, 1656, 2447 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 810, 866, 1220, 1283, 2059 |
| AjiI | CACGTC | 1 cut(s) | 1936 |
| AjnI | CCWGG | 4 cut(s) | 1294, 1814, 1912, 2052 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 189, 221 |
| Alw21I | GWGCWC | 1 cut(s) | 65 |
| Alw26I | GTCTC | 6 cut(s) | 135, 644, 1547, 1911, 1952, 2229 |
| AlwI | GGATC | 6 cut(s) | 638, 931, 1319, 1751, 1933, 2292 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2081 |
| AoxI | GGCC | 5 cut(s) | 1211, 1312, 1824, 2050, 2055 |
| ApeKI | GCWGC | 7 cut(s) | 814, 1095, 1500, 1806, 2075, 2078, 2081 |
| ApoI | RAATTY | 8 cut(s) | 550, 730, 870, 1061, 1130, 1399, 1644, 2066 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 885, 917 |
| AseI | ATTAAT | 1 cut(s) | 270 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 184, 572, 2415 |
| AspLEI | GCGC | 4 cut(s) | 436, 1177, 1374, 1468 |
| AspS9I | GGNCC | 4 cut(s) | 214, 1784, 2056, 2164 |
| AsuC2I | CCSGG | 2 cut(s) | 1505, 2060 |
| AsuHPI | GGTGA | 6 cut(s) | 776, 1424, 1487, 1519, 1791, 2260 |
| AsuII | TTCGAA | 3 cut(s) | 151, 398, 508 |
| AvaII | GGWCC | 3 cut(s) | 214, 1784, 2164 |
| AxyI | CCTNAGG | 1 cut(s) | 1278 |
| BalI | TGGCCA | 2 cut(s) | 1213, 2052 |
| BanI | GGYRCC | 1 cut(s) | 433 |
| BanII | GRGCYC | 2 cut(s) | 65, 1302 |
| BbrPI | CACGTG | 1 cut(s) | 1424 |
| Bbv12I | GWGCWC | 1 cut(s) | 65 |
| BbvCI | CCTCAGC | 1 cut(s) | 2191 |
| BbvI | GCAGC | 7 cut(s) | 826, 1107, 1512, 1818, 2068, 2087, 2090 |
| BciT130I | CCWGG | 4 cut(s) | 1296, 1816, 1914, 2054 |
| BciVI | GTATCC | 1 cut(s) | 1156 |
| BclI | TGATCA | 1 cut(s) | 703 |
| BcnI | CCSGG | 2 cut(s) | 1505, 2060 |
| BcoDI | GTCTC | 6 cut(s) | 135, 644, 1547, 1911, 1952, 2229 |
| BfaI | CTAG | 7 cut(s) | 563, 876, 1434, 1469, 1497, 1995, 2009 |
| BfmI | CTRYAG | 2 cut(s) | 222, 1956 |
| BfoI | RGCGCY | 1 cut(s) | 437 |
| BfuI | GTATCC | 1 cut(s) | 1156 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1567 |
| BglII | AGATCT | 1 cut(s) | 2200 |
| BisI | GCNGC | 7 cut(s) | 815, 1096, 1501, 1807, 2076, 2079, 2082 |
| BlpI | GCTNAGC | 1 cut(s) | 1406 |
| BlsI | GCNGC | 7 cut(s) | 816, 1097, 1502, 1808, 2077, 2080, 2083 |
| BmcAI | AGTACT | 2 cut(s) | 986, 2447 |
| Bme1390I | CCNGG | 6 cut(s) | 1296, 1505, 1816, 1914, 2054, 2060 |
| Bme18I | GGWCC | 3 cut(s) | 214, 1784, 2164 |
| BmgBI | CACGTC | 1 cut(s) | 1936 |
| BmgT120I | GGNCC | 4 cut(s) | 214, 1784, 2056, 2164 |
| BmiI | GGNNCC | 6 cut(s) | 216, 435, 678, 1693, 2058, 2165 |
| BmrFI | CCNGG | 6 cut(s) | 1296, 1505, 1816, 1914, 2054, 2060 |
| BmrI | ACTGGG | 1 cut(s) | 439 |
| BmsI | GCATC | 3 cut(s) | 470, 1885, 2117 |
| BmuI | ACTGGG | 1 cut(s) | 439 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2169 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 52, 84, 1374, 1406 |
| BpmI | CTGGAG | 1 cut(s) | 1798 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2191 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1406 |
| Bpu14I | TTCGAA | 3 cut(s) | 151, 398, 508 |
| BpuEI | CTTGAG | 2 cut(s) | 79, 358 |
| BpuMI | CCSGG | 2 cut(s) | 1505, 2060 |
| BsaAI | YACGTR | 2 cut(s) | 1424, 2320 |
| BsaHI | GRCGYC | 1 cut(s) | 434 |
| BsaI | GGTCTC | 1 cut(s) | 1547 |
| BsaJI | CCNNGG | 6 cut(s) | 672, 1109, 1294, 1295, 1328, 2058 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 115, 145, 2334, 2364 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 810, 866, 1220, 1283, 2059 |
| Bse118I | RCCGGY | 2 cut(s) | 947, 1310 |
| Bse1I | ACTGG | 4 cut(s) | 434, 460, 1214, 1373 |
| Bse21I | CCTNAGG | 1 cut(s) | 1278 |
| Bse3DI | GCAATG | 2 cut(s) | 333, 2424 |
| BseBI | CCWGG | 4 cut(s) | 1296, 1816, 1914, 2054 |
| BseDI | CCNNGG | 6 cut(s) | 672, 1109, 1294, 1295, 1328, 2058 |
| BseGI | GGATG | 4 cut(s) | 623, 1039, 1727, 2380 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 810, 866, 1220, 1283, 2059 |
| BseMI | GCAATG | 2 cut(s) | 333, 2424 |
| BseMII | CTCAG | 8 cut(s) | 140, 335, 572, 1224, 1310, 1405, 1596, 2205 |
| BseNI | ACTGG | 4 cut(s) | 434, 460, 1214, 1373 |
| BseRI | GAGGAG | 2 cut(s) | 689, 1825 |
| BseXI | GCAGC | 7 cut(s) | 826, 1107, 1512, 1818, 2068, 2087, 2090 |
| BseYI | CCCAGC | 2 cut(s) | 278, 1553 |
| BsgI | GTGCAG | 1 cut(s) | 804 |
| BshFI | GGCC | 5 cut(s) | 1213, 1314, 1826, 2052, 2057 |
| BshNI | GGYRCC | 1 cut(s) | 433 |
| BsiHKAI | GWGCWC | 1 cut(s) | 65 |
| BsiSI | CCGG | 5 cut(s) | 804, 948, 1311, 1505, 2060 |
| BslFI | GGGAC | 3 cut(s) | 458, 672, 2177 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 810, 866, 1220, 1283, 2059 |
| BsmAI | GTCTC | 6 cut(s) | 135, 644, 1547, 1911, 1952, 2229 |
| BsmFI | GGGAC | 3 cut(s) | 458, 672, 2177 |
| BsnI | GGCC | 5 cut(s) | 1213, 1314, 1826, 2052, 2057 |
| Bso31I | GGTCTC | 1 cut(s) | 1547 |
| Bsp119I | TTCGAA | 3 cut(s) | 151, 398, 508 |
| Bsp1286I | GDGCHC | 2 cut(s) | 65, 1302 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1406 |
| Bsp19I | CCATGG | 1 cut(s) | 1328 |
| BspACI | CCGC | 4 cut(s) | 1098, 1149, 1158, 1410 |
| BspANI | GGCC | 5 cut(s) | 1213, 1314, 1826, 2052, 2057 |
| BspCNI | CTCAG | 8 cut(s) | 139, 334, 571, 1225, 1311, 1404, 1597, 2204 |
| BspLI | GGNNCC | 6 cut(s) | 216, 435, 678, 1693, 2058, 2165 |
| BspPI | GGATC | 6 cut(s) | 638, 931, 1319, 1751, 1933, 2292 |
| BspQI | GCTCTTC | 1 cut(s) | 70 |
| BspT104I | TTCGAA | 3 cut(s) | 151, 398, 508 |
| BspT107I | GGYRCC | 1 cut(s) | 433 |
| BspTNI | GGTCTC | 1 cut(s) | 1547 |
| BsrDI | GCAATG | 2 cut(s) | 333, 2424 |
| BsrFI | RCCGGY | 2 cut(s) | 947, 1310 |
| BsrI | ACTGG | 4 cut(s) | 434, 460, 1214, 1373 |
| BssAI | RCCGGY | 2 cut(s) | 947, 1310 |
| BssECI | CCNNGG | 6 cut(s) | 672, 1109, 1294, 1295, 1328, 2058 |
| BssNAI | GTATAC | 1 cut(s) | 607 |
| BssNI | GRCGYC | 1 cut(s) | 434 |
| BssT1I | CCWWGG | 1 cut(s) | 1328 |
| Bst1107I | GTATAC | 1 cut(s) | 607 |
| Bst2UI | CCWGG | 4 cut(s) | 1296, 1816, 1914, 2054 |
| Bst4CI | ACNGT | 6 cut(s) | 246, 825, 845, 917, 1286, 2005 |
| Bst6I | CTCTTC | 4 cut(s) | 70, 225, 774, 1638 |
| BstACI | GRCGYC | 1 cut(s) | 434 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 332, 2081 |
| BstBAI | YACGTR | 2 cut(s) | 1424, 2320 |
| BstBI | TTCGAA | 3 cut(s) | 151, 398, 508 |
| BstC8I | GCNNGC | 3 cut(s) | 819, 1429, 2453 |
| BstDSI | CCRYGG | 1 cut(s) | 1328 |
| BstF5I | GGATG | 4 cut(s) | 623, 1039, 1727, 2380 |
| BstH2I | RGCGCY | 1 cut(s) | 437 |
| BstHHI | GCGC | 4 cut(s) | 436, 1177, 1374, 1468 |
| BstMAI | GTCTC | 6 cut(s) | 135, 644, 1547, 1911, 1952, 2229 |
| BstNI | CCWGG | 4 cut(s) | 1296, 1816, 1914, 2054 |
| BstNSI | RCATGY | 1 cut(s) | 206 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2169 |
| BstSCI | CCNGG | 6 cut(s) | 1294, 1503, 1814, 1912, 2052, 2058 |
| BstSFI | CTRYAG | 2 cut(s) | 222, 1956 |
| BstV1I | GCAGC | 7 cut(s) | 826, 1107, 1512, 1818, 2068, 2087, 2090 |
| BstX2I | RGATCY | 3 cut(s) | 630, 2200, 2284 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 46, 1822, 1975 |
| BstYI | RGATCY | 3 cut(s) | 630, 2200, 2284 |
| BstZ17I | GTATAC | 1 cut(s) | 607 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1278 |
| BsuI | GTATCC | 1 cut(s) | 1156 |
| BsuRI | GGCC | 5 cut(s) | 1213, 1314, 1826, 2052, 2057 |
| BtgI | CCRYGG | 1 cut(s) | 1328 |
| BtrI | CACGTC | 1 cut(s) | 1936 |
| BtsCI | GGATG | 4 cut(s) | 623, 1039, 1727, 2380 |
| BtsIMutI | CAGTG | 3 cut(s) | 427, 821, 850 |
| Cac8I | GCNNGC | 3 cut(s) | 819, 1429, 2453 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2081 |
| CfoI | GCGC | 4 cut(s) | 436, 1177, 1374, 1468 |
| Cfr10I | RCCGGY | 2 cut(s) | 947, 1310 |
| Cfr13I | GGNCC | 4 cut(s) | 214, 1784, 2056, 2164 |
| CseI | GACGC | 1 cut(s) | 1061 |
| Csp6I | GTAC | 3 cut(s) | 985, 1655, 2446 |
| CviQI | GTAC | 3 cut(s) | 985, 1655, 2446 |
| DinI | GGCGCC | 1 cut(s) | 435 |
| DraI | TTTAAA | 1 cut(s) | 1642 |
| EaeI | YGGCCR | 2 cut(s) | 1211, 2050 |
| Eam1104I | CTCTTC | 4 cut(s) | 70, 225, 774, 1638 |
| EarI | CTCTTC | 4 cut(s) | 70, 225, 774, 1638 |
| Ecl136II | GAGCTC | 1 cut(s) | 63 |
| Eco130I | CCWWGG | 1 cut(s) | 1328 |
| Eco24I | GRGCYC | 2 cut(s) | 65, 1302 |
| Eco31I | GGTCTC | 1 cut(s) | 1547 |
| Eco47I | GGWCC | 3 cut(s) | 214, 1784, 2164 |
| Eco53kI | GAGCTC | 1 cut(s) | 63 |
| Eco57I | CTGAAG | 2 cut(s) | 1619, 1695 |
| Eco72I | CACGTG | 1 cut(s) | 1424 |
| Eco81I | CCTNAGG | 1 cut(s) | 1278 |
| EcoICRI | GAGCTC | 1 cut(s) | 63 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1784, 2056 |
| EcoRI | GAATTC | 3 cut(s) | 550, 870, 1061 |
| EcoRII | CCWGG | 4 cut(s) | 1294, 1814, 1912, 2052 |
| EcoT14I | CCWWGG | 1 cut(s) | 1328 |
| EcoT38I | GRGCYC | 2 cut(s) | 65, 1302 |
| EgeI | GGCGCC | 1 cut(s) | 435 |
| EheI | GGCGCC | 1 cut(s) | 435 |
| ErhI | CCWWGG | 1 cut(s) | 1328 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 336, 368 |
| FaqI | GGGAC | 3 cut(s) | 458, 672, 2177 |
| FauI | CCCGC | 1 cut(s) | 1091 |
| FbaI | TGATCA | 1 cut(s) | 703 |
| FblI | GTMKAC | 2 cut(s) | 606, 1361 |
| Fnu4HI | GCNGC | 7 cut(s) | 815, 1096, 1501, 1807, 2076, 2079, 2082 |
| FokI | GGATG | 4 cut(s) | 630, 1046, 1714, 2367 |
| FriOI | GRGCYC | 2 cut(s) | 65, 1302 |
| Fsp4HI | GCNGC | 7 cut(s) | 815, 1096, 1501, 1807, 2076, 2079, 2082 |
| FspBI | CTAG | 7 cut(s) | 563, 876, 1434, 1469, 1497, 1995, 2009 |
| GlaI | GCGC | 4 cut(s) | 435, 1176, 1373, 1467 |
| GluI | GCNGC | 7 cut(s) | 815, 1096, 1501, 1807, 2076, 2079, 2082 |
| GsaI | CCCAGC | 2 cut(s) | 282, 1557 |
| GsuI | CTGGAG | 1 cut(s) | 1798 |
| HaeII | RGCGCY | 1 cut(s) | 437 |
| HaeIII | GGCC | 5 cut(s) | 1213, 1314, 1826, 2052, 2057 |
| HapII | CCGG | 5 cut(s) | 804, 948, 1311, 1505, 2060 |
| HgaI | GACGC | 1 cut(s) | 1061 |
| HhaI | GCGC | 4 cut(s) | 436, 1177, 1374, 1468 |
| Hin1I | GRCGYC | 1 cut(s) | 434 |
| Hin6I | GCGC | 4 cut(s) | 434, 1175, 1372, 1466 |
| HinP1I | GCGC | 4 cut(s) | 434, 1175, 1372, 1466 |
| HincII | GTYRAC | 2 cut(s) | 841, 1239 |
| HindII | GTYRAC | 2 cut(s) | 841, 1239 |
| HindIII | AAGCTT | 2 cut(s) | 291, 2413 |
| HpaII | CCGG | 5 cut(s) | 804, 948, 1311, 1505, 2060 |
| HphI | GGTGA | 6 cut(s) | 776, 1424, 1487, 1519, 1791, 2260 |
| Hpy166II | GTNNAC | 6 cut(s) | 421, 607, 841, 1026, 1239, 1362 |
| Hpy188III | TCNNGA | 9 cut(s) | 177, 260, 448, 486, 515, 1232, 1517, 1544, 1995 |
| Hpy8I | GTNNAC | 6 cut(s) | 421, 607, 841, 1026, 1239, 1362 |
| Hpy99I | CGWCG | 1 cut(s) | 87 |
| HpyCH4III | ACNGT | 6 cut(s) | 246, 825, 845, 917, 1286, 2005 |
| HpyCH4IV | ACGT | 4 cut(s) | 609, 1423, 1935, 2319 |
| HpyCH4V | TGCA | 9 cut(s) | 202, 461, 821, 1806, 1903, 1985, 2084, 2100, 2451 |
| HpySE526I | ACGT | 4 cut(s) | 609, 1423, 1935, 2319 |
| Hsp92I | GRCGYC | 1 cut(s) | 434 |
| HspAI | GCGC | 4 cut(s) | 434, 1175, 1372, 1466 |
| KasI | GGCGCC | 1 cut(s) | 433 |
| Ksp22I | TGATCA | 1 cut(s) | 703 |
| LguI | GCTCTTC | 1 cut(s) | 70 |
| LmnI | GCTCC | 4 cut(s) | 41, 501, 676, 1691 |
| Lsp1109I | GCAGC | 7 cut(s) | 826, 1107, 1512, 1818, 2068, 2087, 2090 |
| LweI | GCATC | 3 cut(s) | 470, 1885, 2117 |
| MaeI | CTAG | 7 cut(s) | 563, 876, 1434, 1469, 1497, 1995, 2009 |
| MaeII | ACGT | 4 cut(s) | 609, 1423, 1935, 2319 |
| MaeIII | GTNAC | 7 cut(s) | 17, 252, 407, 1191, 1306, 1419, 2171 |
| MfeI | CAATTG | 1 cut(s) | 1839 |
| MflI | RGATCY | 3 cut(s) | 630, 2200, 2284 |
| MhlI | GDGCHC | 2 cut(s) | 65, 1302 |
| MlsI | TGGCCA | 2 cut(s) | 1213, 2052 |
| MluNI | TGGCCA | 2 cut(s) | 1213, 2052 |
| Mly113I | GGCGCC | 1 cut(s) | 434 |
| MlyI | GAGTC | 6 cut(s) | 349, 646, 916, 1199, 1244, 2179 |
| MmeI | TCCRAC | 2 cut(s) | 871, 1903 |
| Mox20I | TGGCCA | 2 cut(s) | 1213, 2052 |
| MroXI | GAANNNNTTC | 3 cut(s) | 184, 572, 2415 |
| MscI | TGGCCA | 2 cut(s) | 1213, 2052 |
| MseI | TTAA | 8 cut(s) | 270, 303, 981, 1020, 1524, 1641, 1763, 2352 |
| MslI | CAYNNNNRTG | 2 cut(s) | 449, 1973 |
| Msp20I | TGGCCA | 2 cut(s) | 1213, 2052 |
| MspA1I | CMGCKG | 5 cut(s) | 1098, 1160, 1553, 1855, 2081 |
| MspI | CCGG | 5 cut(s) | 804, 948, 1311, 1505, 2060 |
| MspR9I | CCNGG | 6 cut(s) | 1296, 1505, 1816, 1914, 2054, 2060 |
| MunI | CAATTG | 1 cut(s) | 1839 |
| MvaI | CCWGG | 4 cut(s) | 1296, 1816, 1914, 2054 |
| NarI | GGCGCC | 1 cut(s) | 434 |
| NciI | CCSGG | 2 cut(s) | 1505, 2060 |
| NcoI | CCATGG | 1 cut(s) | 1328 |
| NlaIV | GGNNCC | 6 cut(s) | 216, 435, 678, 1693, 2058, 2165 |
| NmeAIII | GCCGAG | 1 cut(s) | 697 |
| NmuCI | GTSAC | 4 cut(s) | 17, 1191, 1419, 2171 |
| NspI | RCATGY | 1 cut(s) | 206 |
| NspV | TTCGAA | 3 cut(s) | 151, 398, 508 |
| PasI | CCCWGGG | 1 cut(s) | 1295 |
| PciSI | GCTCTTC | 1 cut(s) | 70 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 79 |
| PdmI | GAANNNNTTC | 3 cut(s) | 184, 572, 2415 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1220 |
| PfoI | TCCNGGA | 1 cut(s) | 1814 |
| PkrI | GCNGC | 7 cut(s) | 816, 1097, 1502, 1808, 2077, 2080, 2083 |
| PleI | GAGTC | 6 cut(s) | 348, 646, 915, 1198, 1243, 2178 |
| PluTI | GGCGCC | 1 cut(s) | 437 |
| PmaCI | CACGTG | 1 cut(s) | 1424 |
| PmlI | CACGTG | 1 cut(s) | 1424 |
| PpsI | GAGTC | 6 cut(s) | 348, 646, 915, 1198, 1243, 2178 |
| Ppu21I | YACGTR | 2 cut(s) | 1424, 2320 |
| PpuMI | RGGWCCY | 1 cut(s) | 1784 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2169 |
| PshBI | ATTAAT | 1 cut(s) | 270 |
| PsiI | TTATAA | 1 cut(s) | 1862 |
| Psp124BI | GAGCTC | 1 cut(s) | 65 |
| Psp5II | RGGWCCY | 1 cut(s) | 1784 |
| Psp6I | CCWGG | 4 cut(s) | 1294, 1814, 1912, 2052 |
| PspCI | CACGTG | 1 cut(s) | 1424 |
| PspFI | CCCAGC | 2 cut(s) | 278, 1553 |
| PspGI | CCWGG | 4 cut(s) | 1294, 1814, 1912, 2052 |
| PspN4I | GGNNCC | 6 cut(s) | 216, 435, 678, 1693, 2058, 2165 |
| PspPI | GGNCC | 4 cut(s) | 214, 1784, 2056, 2164 |
| PspPPI | RGGWCCY | 1 cut(s) | 1784 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2081 |
| PsuI | RGATCY | 3 cut(s) | 630, 2200, 2284 |
| PvuII | CAGCTG | 3 cut(s) | 1553, 1855, 2081 |
| RsaI | GTAC | 3 cut(s) | 986, 1656, 2447 |
| RsaNI | GTAC | 3 cut(s) | 985, 1655, 2446 |
| RseI | CAYNNNNRTG | 2 cut(s) | 449, 1973 |
| SacI | GAGCTC | 1 cut(s) | 65 |
| SapI | GCTCTTC | 1 cut(s) | 70 |
| SaqAI | TTAA | 8 cut(s) | 270, 303, 981, 1020, 1524, 1641, 1763, 2352 |
| SatI | GCNGC | 7 cut(s) | 815, 1096, 1501, 1807, 2076, 2079, 2082 |
| Sau96I | GGNCC | 4 cut(s) | 214, 1784, 2056, 2164 |
| ScaI | AGTACT | 2 cut(s) | 986, 2447 |
| SchI | GAGTC | 6 cut(s) | 349, 646, 916, 1199, 1244, 2179 |
| ScrFI | CCNGG | 6 cut(s) | 1296, 1505, 1816, 1914, 2054, 2060 |
| SduI | GDGCHC | 2 cut(s) | 65, 1302 |
| SfaNI | GCATC | 3 cut(s) | 470, 1885, 2117 |
| SfcI | CTRYAG | 2 cut(s) | 222, 1956 |
| SfoI | GGCGCC | 1 cut(s) | 435 |
| SfuI | TTCGAA | 3 cut(s) | 151, 398, 508 |
| SinI | GGWCC | 3 cut(s) | 214, 1784, 2164 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 449, 1973 |
| SmlI | CTYRAG | 2 cut(s) | 58, 337 |
| SmoI | CTYRAG | 2 cut(s) | 58, 337 |
| SsiI | CCGC | 4 cut(s) | 1098, 1149, 1158, 1410 |
| SspDI | GGCGCC | 1 cut(s) | 433 |
| SspI | AATATT | 2 cut(s) | 274, 935 |
| SspMI | CTAG | 7 cut(s) | 563, 876, 1434, 1469, 1497, 1995, 2009 |
| SstI | GAGCTC | 1 cut(s) | 65 |
| StyD4I | CCNGG | 6 cut(s) | 1294, 1503, 1814, 1912, 2052, 2058 |
| StyI | CCWWGG | 1 cut(s) | 1328 |
| TaaI | ACNGT | 6 cut(s) | 246, 825, 845, 917, 1286, 2005 |
| TaiI | ACGT | 4 cut(s) | 612, 1426, 1938, 2322 |
| TaqI | TCGA | 8 cut(s) | 151, 398, 447, 508, 855, 1381, 1545, 1577 |
| TatI | WGTACW | 2 cut(s) | 984, 2445 |
| Tru1I | TTAA | 8 cut(s) | 270, 303, 981, 1020, 1524, 1641, 1763, 2352 |
| Tru9I | TTAA | 8 cut(s) | 270, 303, 981, 1020, 1524, 1641, 1763, 2352 |
| TscAI | CASTG | 3 cut(s) | 434, 828, 850 |
| TseFI | GTSAC | 4 cut(s) | 17, 1191, 1419, 2171 |
| TseI | GCWGC | 7 cut(s) | 814, 1095, 1500, 1806, 2075, 2078, 2081 |
| Tsp45I | GTSAC | 4 cut(s) | 17, 1191, 1419, 2171 |
| TspGWI | ACGGA | 3 cut(s) | 2279, 2322, 2417 |
| TspRI | CASTG | 3 cut(s) | 434, 828, 850 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1220 |
| VpaK11BI | GGWCC | 3 cut(s) | 214, 1784, 2164 |
| VspI | ATTAAT | 1 cut(s) | 270 |
| XapI | RAATTY | 8 cut(s) | 550, 730, 870, 1061, 1130, 1399, 1644, 2066 |
| XbaI | TCTAGA | 1 cut(s) | 1994 |
| XceI | RCATGY | 1 cut(s) | 206 |
| XmiI | GTMKAC | 2 cut(s) | 606, 1361 |
| XmnI | GAANNNNTTC | 3 cut(s) | 184, 572, 2415 |
| XspI | CTAG | 7 cut(s) | 563, 876, 1434, 1469, 1497, 1995, 2009 |
| ZrmI | AGTACT | 2 cut(s) | 986, 2447 |