Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0007453

Physical Location & Seq

Genomic Coordinates Reverse (-)

3528272 .. 3534430

Gene Structure 6159 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG021400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

ATGGATGGATCTAAAGCTGTCCCATTGAAGGAGATGCCTCTGGGAATTGATGCAACGACTGAGGATGAATATGCATCGCAGTCTAGATTACTGCAAGAGTTCACCAGTATATCCAGCTTTGACAAGGCATGGATTAAATCTGACAGTAGAAATGGCTCCCAGGCAATGTTTTCAATTAGTCAACCAAATCTTTTGGCAAACAAGAGGAGGAAATTTATTCTATCCTCTCACATTTCGAAAGGAAGTAGCAACTCAGTAAAGTTCGAATGGGCCCCATTTCCTGTTGAGATGACAGGAGTCTCTGTAATTGTTCCATCACCGTCAGGTTCAAAGCTTCTTGTAGTTCGGAATCCTGAAGCCGAAGCTTCCTGTCAATTTGAAATTTGGGGTCCAGCTCAAGTGGAAAAAGAATTCCATATTCCCCATTCTGTTCATGGCTCAGTATATGCTGATGAATGGTTTCAGGGAATATCTTGGAACTCTGATGAAACTCTCATCGCTTATGTTGCTGAGGAGCCATCTCCTCCCAAGCCAACATTTACATGTCAGGGCTACAAGAAACCTGCACTTTTTGTCATCAACATTAACAGTGGAGACACACAAGCTGTTAAAGGAATTGAAAAGCATTTGAGTGTTGGCCAAGTTGTGTGGGCACCATCAGTTAGAGGATCACATCAGTATTTGGTTTTTGTTGGGTGGTCAGCAGATACCAGAAAGCTCGGAATTAAGTACTGTTATAACAGGCCCTGTGCTTTGTATGCGGTTAAGGCACCACTTTATGGATCAGAAGCTGATGGGCAAGAGATCAATTCCAGAGTTAATTCAATTAAAGATTCTCCTGTGGTAAATCTAACTGAAAGCATAAGTAGTGCCTACCATCCACGTTTCAGTCCAGATGGAAAATTGCTTTTGTTTTTATCTTCAAGAAGTGCTGTGGATTCTGGGGCACATTCTGCAACAGATTCTCTGCACAGAATTGATTGGCCAATAGATGGGGTGCCATGCTCATCTTTCATAATTTTTGATGTGATTCCTGTTGTAATGTGTGCGGATGATGGTTGCTTCCCTGGCCTTTACTGTTCAAGTTTCCTTAGTAATCCATGGTTTTCTGATGCGATGGTCGTATCTTCCTTCTGGGGCAGCTGTCAAGTAGTACTTTCTGTCAATGTGTTGAGTGGAGAGGTACTACGCATCAGCCCTACTAATTCAAACTTTTCATGGAATGTTCTTTCATTGGATGGGGACAACATCATTGCTGTGTCTAGCAGTCTAGTAAATGTACCACGCATCAAGTATGGTTATCTTGTTGATAGACAGAAGAAAAGCACTGCATGGAATTGGTTAGATGTACCAAGCCCCACAAACGAATGCTCTGAGAAGGTGGAATCTTTGCTCTCATCTCTTCAGTTCAGTATAATGAACATTCCTGTCAGGGATGTTTCTGATAGCCTAACAAAAGGTGCTGGAAAACCTTTTGAGGCTATATTTGTGTCTTCCAAAACTAAAAGAAGTGATTCATTTGATCCATTAATTGTATTCCTTCATGGAGGCCCGCATACTGTTTCTTTGTCAAGCTTTTCAAAGTCCTTAGCATTTCTCTGTACAATTGGGTTTAACTTGTTACTTGTAAATTATAGAGGTTCACTGGGATTTGGTGAGGAAGCACTTCAATCTCTTCCAGGGAATATTGGCTCCCAGGATGTGAATGATGTACTTGTGGCTGTTGATCATGTCATTGACATGGGGCTCGCTAGTCCATCCAAAATCGCCGTTCTTGGTGGTTCTCATGGTGGCTTTTTAACAACTCACTTAATTGGTCAGGCACCGGAGAAGTTTTTTGTGGCAGCTACAAGGAATCCTGCATGTAACCTGGCATTGATGGTTGGTACAACAGACATCCCTGATTGGTGCTATGTGGAGGCCTATGGAACTGAGGGCAAAAATAGATATACAGAAGCACCTTCAGCTGAGCATCTGGCTCTCTTTCACAGCAAGTCTCCTATTTCACAAATTTCAAAGGCCAAAACACCCACCCTTTTTCTCTTGGGTGCTCAAGATATTCGCCTTCCAATTTGTAGCGGATTGCAATATGCTCGGGCATTAAAGGAAAAGGGAGTTGCTGTGAAAGTCATTGTGTTCCCTAATGACAACCATCCAATTGACAAGCCGCAATCCGACTTTGAGAGCTTTCTAAATATCGGTGTGTGGTTCAAGAGGTATTTGTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004177 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0008238 GO:0009507 GO:0009536 GO:0009987 GO:0016043 GO:0016787 GO:0017171 GO:0019538 GO:0022607 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0051259 GO:0051260 GO:0051262 GO:0051289 GO:0065003 GO:0070008 GO:0070009 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PD40 Peptidase_S9

Protein Analysis

742

Amino Acids

81.01

Weight (kDa)

6.12

Isoelectric Point (pI)

43.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
APEH_N	PF19283	10 - 187	7.9e-87	Acylamino-acid-releasing enzyme, N-terminal domain
APEH_N	PF19283	184 - 462	3.7e-136	Acylamino-acid-releasing enzyme, N-terminal domain
COesterase	PF00135	495 - 604	6.3e-06	Carboxylesterase family
BD-FAE	PF20434	506 - 696	2.1e-06	BD-FAE
Peptidase_S9	PF00326	525 - 741	3.9e-34	Prolyl oligopeptidase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007453)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14570
fragaria_vesca	FvH4_4g02060 FvH4_4g02162
malus_domestica	MD13G1203600.v1.1 MD16G1205300.v1.1 MD16G1205600.v1.1
prunus_persica	Prupe.1G026800_v2.0.a1
pyrus_communis	pycom13g17690 pycom16g17300 pycom16g17310
rosa_chinensis	RchiOBHm_Chr4g0389431 RchiOBHm_Chr4g0389461
rosa_laevigata	RLG00000009980 RLG00000009982
rosa_multiflora	Rmu_sc0002498.1_g000017
rosa_roxburghii	Rroxscaffold_5G00335440 Rroxscaffold_5G00335460
rosa_rugosa	Rorug03G0323200
rosa_samantha	Rh4AG027700 Rh4AG027800 Rh4BG020600 Rh4BG021000 Rh4DG021300 Rh4DG021400
rosa_wichuraiana	Rw4G002010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	738
Acc36I	ACCTGC	1 cut(s)	571
AccB1I	GGYRCC	4 cut(s)	652, 769, 997, 1822
AccB7I	CCANNNNNTGG	2 cut(s)	779, 992
AciI	CCGC	5 cut(s)	761, 1049, 1553, 2079, 2168
AclWI	GGATC	4 cut(s)	16, 676, 790, 1517
AcoI	YGGCCR	2 cut(s)	637, 983
AcsI	RAATTY	4 cut(s)	212, 381, 410, 2010
AcuI	CTGAAG	3 cut(s)	375, 1388, 1947
AfaI	GTAC	8 cut(s)	731, 1155, 1185, 1281, 1350, 1603, 1713, 1888
AfiI	CCNNNNNNNGG	3 cut(s)	28, 779, 992
AflIII	ACRYGT	1 cut(s)	542
AjnI	CCWGG	5 cut(s)	159, 1066, 1678, 1695, 1869
Alw21I	GWGCWC	1 cut(s)	2053
Alw26I	GTCTC	3 cut(s)	304, 588, 2001
AlwI	GGATC	4 cut(s)	16, 676, 790, 1517
AlwNI	CAGNNNCTG	2 cut(s)	747, 791
Ama87I	CYCGRG	1 cut(s)	2094
AoxI	GGCC	8 cut(s)	270, 637, 743, 983, 1069, 1549, 1920, 2019
ApaI	GGGCCC	1 cut(s)	274
ApeKI	GCWGC	2 cut(s)	1140, 1844
ApoI	RAATTY	4 cut(s)	212, 381, 410, 2010
AseI	ATTAAT	1 cut(s)	1529
Asp700I	GAANNNNTTC	3 cut(s)	459, 1513, 1665
AspS9I	GGNCC	5 cut(s)	270, 271, 389, 744, 1550
AsuHPI	GGTGA	3 cut(s)	94, 309, 1667
AsuII	TTCGAA	2 cut(s)	236, 264
AvaI	CYCGRG	1 cut(s)	2094
AvaII	GGWCC	1 cut(s)	389
BaeGI	GKGCMC	3 cut(s)	274, 655, 949
BalI	TGGCCA	2 cut(s)	639, 985
BanI	GGYRCC	4 cut(s)	652, 769, 997, 1822
BanII	GRGCYC	2 cut(s)	274, 1749
BbsI	GAAGAC	1 cut(s)	1485
Bbv12I	GWGCWC	1 cut(s)	2053
BbvCI	CCTCAGC	1 cut(s)	510
BbvI	GCAGC	2 cut(s)	1152, 1856
BceAI	ACGGC	1 cut(s)	1754
BcgI	CGANNNNNNTGC	2 cut(s)	2075, 2109
BciT130I	CCWGG	5 cut(s)	161, 1068, 1680, 1697, 1871
BclI	TGATCA	1 cut(s)	1726
BcoDI	GTCTC	3 cut(s)	304, 588, 2001
BfaI	CTAG	4 cut(s)	84, 1263, 1271, 1752
BfuAI	ACCTGC	1 cut(s)	571
BisI	GCNGC	3 cut(s)	1141, 1845, 2168
BlpI	GCTNAGC	1 cut(s)	1968
BlsI	GCNGC	3 cut(s)	1142, 1846, 2169
BmcAI	AGTACT	2 cut(s)	731, 1155
Bme1390I	CCNGG	5 cut(s)	161, 1068, 1680, 1697, 1871
Bme18I	GGWCC	1 cut(s)	389
BmeT110I	CYCGRG	1 cut(s)	2094
BmgT120I	GGNCC	5 cut(s)	270, 271, 389, 744, 1550
BmrFI	CCNGG	5 cut(s)	161, 1068, 1680, 1697, 1871
BmrI	ACTGGG	1 cut(s)	1655
BmsI	GCATC	7 cut(s)	24, 40, 83, 1102, 1200, 1296, 1981
BmuI	ACTGGG	1 cut(s)	1655
BoxI	GACNNNNGTC	1 cut(s)	296
BpiI	GAAGAC	1 cut(s)	1485
Bpu10I	CCTNAGC	2 cut(s)	510, 1588
Bpu1102I	GCTNAGC	1 cut(s)	1968
Bpu14I	TTCGAA	2 cut(s)	236, 264
BpuEI	CTTGAG	2 cut(s)	381, 2037
BsaJI	CCNNGG	5 cut(s)	159, 1066, 1100, 1679, 1695
BsaWI	WCCGGW	1 cut(s)	1825
BsaXI	ACNNNNNCTCC	4 cut(s)	288, 318, 2106, 2136
Bsc4I	CCNNNNNNNGG	3 cut(s)	28, 779, 992
Bse1I	ACTGG	2 cut(s)	105, 1650
Bse3DI	GCAATG	2 cut(s)	171, 1251
BseBI	CCWGG	5 cut(s)	161, 1068, 1680, 1697, 1871
BseDI	CCNNGG	5 cut(s)	159, 1066, 1100, 1679, 1695
BseLI	CCNNNNNNNGG	3 cut(s)	28, 779, 992
BseMI	GCAATG	2 cut(s)	171, 1251
BseMII	CTCAG	7 cut(s)	51, 267, 453, 501, 1365, 1923, 1959
BseNI	ACTGG	2 cut(s)	105, 1650
BseRI	GAGGAG	3 cut(s)	220, 513, 527
BseSI	GKGCMC	3 cut(s)	274, 655, 949
BseXI	GCAGC	2 cut(s)	1152, 1856
BsgI	GTGCAG	2 cut(s)	549, 953
BshFI	GGCC	8 cut(s)	272, 639, 745, 985, 1071, 1551, 1922, 2021
BshNI	GGYRCC	4 cut(s)	652, 769, 997, 1822
BsiHKAI	GWGCWC	1 cut(s)	2053
BsiHKCI	CYCGRG	1 cut(s)	2094
BsiSI	CCGG	1 cut(s)	1826
BslFI	GGGAC	2 cut(s)	5, 1256
BslI	CCNNNNNNNGG	3 cut(s)	28, 779, 992
BsmAI	GTCTC	3 cut(s)	304, 588, 2001
BsmFI	GGGAC	2 cut(s)	5, 1256
BsmI	GAATGC	1 cut(s)	1373
BsnI	GGCC	8 cut(s)	272, 639, 745, 985, 1071, 1551, 1922, 2021
BsoBI	CYCGRG	1 cut(s)	2094
Bsp119I	TTCGAA	2 cut(s)	236, 264
Bsp120I	GGGCCC	1 cut(s)	270
Bsp1286I	GDGCHC	5 cut(s)	274, 655, 949, 1749, 2053
Bsp1407I	TGTACA	1 cut(s)	1601
Bsp143I	GATC	6 cut(s)	8, 668, 782, 804, 1522, 1726
Bsp1720I	GCTNAGC	1 cut(s)	1968
Bsp19I	CCATGG	1 cut(s)	1100
BspACI	CCGC	5 cut(s)	761, 1049, 1553, 2079, 2168
BspANI	GGCC	8 cut(s)	272, 639, 745, 985, 1071, 1551, 1922, 2021
BspCNI	CTCAG	7 cut(s)	52, 266, 452, 502, 1366, 1924, 1960
BspMI	ACCTGC	1 cut(s)	571
BspPI	GGATC	4 cut(s)	16, 676, 790, 1517
BspT104I	TTCGAA	2 cut(s)	236, 264
BspT107I	GGYRCC	4 cut(s)	652, 769, 997, 1822
BsrDI	GCAATG	2 cut(s)	171, 1251
BsrGI	TGTACA	1 cut(s)	1601
BsrI	ACTGG	2 cut(s)	105, 1650
BssECI	CCNNGG	5 cut(s)	159, 1066, 1100, 1679, 1695
BssMI	GATC	6 cut(s)	8, 668, 782, 804, 1522, 1726
BssT1I	CCWWGG	1 cut(s)	1100
Bst2UI	CCWGG	5 cut(s)	161, 1068, 1680, 1697, 1871
Bst4CI	ACNGT	6 cut(s)	146, 321, 590, 734, 1079, 1561
Bst6I	CTCTTC	2 cut(s)	1407, 1680
BstAPI	GCANNNNNTGC	1 cut(s)	953
BstAUI	TGTACA	1 cut(s)	1601
BstBI	TTCGAA	2 cut(s)	236, 264
BstC8I	GCNNGC	2 cut(s)	1553, 1749
BstDEI	CTNAG	9 cut(s)	60, 253, 439, 510, 1091, 1374, 1588, 1932, 1968
BstDSI	CCRYGG	1 cut(s)	1100
BstKTI	GATC	6 cut(s)	11, 671, 785, 807, 1525, 1729
BstMAI	GTCTC	3 cut(s)	304, 588, 2001
BstMBI	GATC	6 cut(s)	8, 668, 782, 804, 1522, 1726
BstMWI	GCNNNNNNNGC	6 cut(s)	506, 758, 767, 953, 1068, 1964
BstNI	CCWGG	5 cut(s)	161, 1068, 1680, 1697, 1871
BstNSI	RCATGY	2 cut(s)	546, 1866
BstPAI	GACNNNNGTC	1 cut(s)	296
BstSCI	CCNGG	5 cut(s)	159, 1066, 1678, 1695, 1869
BstSLI	GKGCMC	3 cut(s)	274, 655, 949
BstV1I	GCAGC	2 cut(s)	1152, 1856
BstV2I	GAAGAC	1 cut(s)	1485
BstX2I	RGATCY	1 cut(s)	8
BstYI	RGATCY	1 cut(s)	8
BsuRI	GGCC	8 cut(s)	272, 639, 745, 985, 1071, 1551, 1922, 2021
BtgI	CCRYGG	1 cut(s)	1100
BtgZI	GCGATG	3 cut(s)	60, 481, 1130
BtsI	GCAGTG	1 cut(s)	1326
BtsIMutI	CAGTG	3 cut(s)	595, 1326, 1643
BveI	ACCTGC	1 cut(s)	571
Cac8I	GCNNGC	2 cut(s)	1553, 1749
CaiI	CAGNNNCTG	2 cut(s)	747, 791
Cfr13I	GGNCC	5 cut(s)	270, 271, 389, 744, 1550
Csp6I	GTAC	8 cut(s)	730, 1154, 1184, 1280, 1349, 1602, 1712, 1887
CspCI	CAANNNNNGTGG	2 cut(s)	629, 664
CviQI	GTAC	8 cut(s)	730, 1154, 1184, 1280, 1349, 1602, 1712, 1887
DdeI	CTNAG	9 cut(s)	60, 253, 439, 510, 1091, 1374, 1588, 1932, 1968
DpnI	GATC	6 cut(s)	10, 670, 784, 806, 1524, 1728
DpnII	GATC	6 cut(s)	8, 668, 782, 804, 1522, 1726
EaeI	YGGCCR	2 cut(s)	637, 983
Eam1104I	CTCTTC	2 cut(s)	1407, 1680
EarI	CTCTTC	2 cut(s)	1407, 1680
Eco130I	CCWWGG	1 cut(s)	1100
Eco147I	AGGCCT	1 cut(s)	1922
Eco24I	GRGCYC	2 cut(s)	274, 1749
Eco47I	GGWCC	1 cut(s)	389
Eco57I	CTGAAG	3 cut(s)	375, 1388, 1947
Eco88I	CYCGRG	1 cut(s)	2094
EcoO109I	RGGNCCY	2 cut(s)	271, 744
EcoRI	GAATTC	1 cut(s)	410
EcoRII	CCWGG	5 cut(s)	159, 1066, 1678, 1695, 1869
EcoT14I	CCWWGG	1 cut(s)	1100
EcoT22I	ATGCAT	1 cut(s)	76
EcoT38I	GRGCYC	2 cut(s)	274, 1749
ErhI	CCWWGG	1 cut(s)	1100
FalI	AAGNNNNNCTT	2 cut(s)	1140, 1172
FaqI	GGGAC	2 cut(s)	5, 1256
FauI	CCCGC	1 cut(s)	1560
FbaI	TGATCA	1 cut(s)	1726
Fnu4HI	GCNGC	3 cut(s)	1141, 1845, 2168
FriOI	GRGCYC	2 cut(s)	274, 1749
Fsp4HI	GCNGC	3 cut(s)	1141, 1845, 2168
FspBI	CTAG	4 cut(s)	84, 1263, 1271, 1752
GluI	GCNGC	3 cut(s)	1141, 1845, 2168
HaeIII	GGCC	8 cut(s)	272, 639, 745, 985, 1071, 1551, 1922, 2021
HapII	CCGG	1 cut(s)	1826
HincII	GTYRAC	1 cut(s)	182
HindII	GTYRAC	1 cut(s)	182
HindIII	AAGCTT	3 cut(s)	332, 363, 1573
HinfI	GANTC	9 cut(s)	297, 349, 833, 938, 962, 1030, 1385, 1514, 1855
HpaII	CCGG	1 cut(s)	1826
HphI	GGTGA	3 cut(s)	94, 309, 1667
Hpy166II	GTNNAC	3 cut(s)	102, 182, 1643
Hpy188I	TCNGA	9 cut(s)	142, 348, 484, 722, 787, 1111, 1375, 1444, 2176
Hpy188III	TCNNGA	7 cut(s)	84, 353, 813, 893, 924, 2054, 2212
Hpy8I	GTNNAC	3 cut(s)	102, 182, 1643
HpyAV	CCTTC	6 cut(s)	22, 1141, 1372, 1550, 1971, 2075
HpyCH4III	ACNGT	6 cut(s)	146, 321, 590, 734, 1079, 1561
HpyCH4IV	ACGT	1 cut(s)	883
HpyCH4V	TGCA	9 cut(s)	53, 74, 94, 566, 956, 970, 1331, 1862, 2086
HpyF10VI	GCNNNNNNNGC	6 cut(s)	506, 758, 767, 953, 1068, 1964
HpyF3I	CTNAG	9 cut(s)	60, 253, 439, 510, 1091, 1374, 1588, 1932, 1968
HpySE526I	ACGT	1 cut(s)	883
Ksp22I	TGATCA	1 cut(s)	1726
Kzo9I	GATC	6 cut(s)	8, 668, 782, 804, 1522, 1726
LmnI	GCTCC	3 cut(s)	161, 514, 1697
Lsp1109I	GCAGC	2 cut(s)	1152, 1856
LweI	GCATC	7 cut(s)	24, 40, 83, 1102, 1200, 1296, 1981
MaeI	CTAG	4 cut(s)	84, 1263, 1271, 1752
MaeII	ACGT	1 cut(s)	883
MaeIII	GTNAC	2 cut(s)	1620, 1865
MalI	GATC	6 cut(s)	10, 670, 784, 806, 1524, 1728
MboI	GATC	6 cut(s)	8, 668, 782, 804, 1522, 1726
MboII	GAAGA	6 cut(s)	912, 1119, 1330, 1394, 1485, 1667
MfeI	CAATTG	2 cut(s)	1605, 2157
MflI	RGATCY	1 cut(s)	8
MhlI	GDGCHC	5 cut(s)	274, 655, 949, 1749, 2053
MlsI	TGGCCA	2 cut(s)	639, 985
MluNI	TGGCCA	2 cut(s)	639, 985
MlyI	GAGTC	1 cut(s)	306
MmeI	TCCRAC	1 cut(s)	2199
Mox20I	TGGCCA	2 cut(s)	639, 985
Mph1103I	ATGCAT	1 cut(s)	76
MroXI	GAANNNNTTC	3 cut(s)	459, 1513, 1665
MscI	TGGCCA	2 cut(s)	639, 985
MslI	CAYNNNNRTG	4 cut(s)	541, 630, 1256, 1739
Msp20I	TGGCCA	2 cut(s)	639, 985
MspA1I	CMGCKG	2 cut(s)	1143, 1967
MspI	CCGG	1 cut(s)	1826
MspR9I	CCNGG	5 cut(s)	161, 1068, 1680, 1697, 1871
MunI	CAATTG	2 cut(s)	1605, 2157
Mva1269I	GAATGC	1 cut(s)	1373
MvaI	CCWGG	5 cut(s)	161, 1068, 1680, 1697, 1871
MwoI	GCNNNNNNNGC	6 cut(s)	506, 758, 767, 953, 1068, 1964
NcoI	CCATGG	1 cut(s)	1100
NdeII	GATC	6 cut(s)	8, 668, 782, 804, 1522, 1726
NsiI	ATGCAT	1 cut(s)	76
NspI	RCATGY	2 cut(s)	546, 1866
NspV	TTCGAA	2 cut(s)	236, 264
PceI	AGGCCT	1 cut(s)	1922
PciI	ACATGT	1 cut(s)	542
PctI	GAATGC	1 cut(s)	1373
PdmI	GAANNNNTTC	3 cut(s)	459, 1513, 1665
PfeI	GAWTC	8 cut(s)	349, 833, 938, 962, 1030, 1385, 1514, 1855
PflMI	CCANNNNNTGG	2 cut(s)	779, 992
PkrI	GCNGC	3 cut(s)	1142, 1846, 2169
PleI	GAGTC	1 cut(s)	305
PpsI	GAGTC	1 cut(s)	305
PscI	ACATGT	1 cut(s)	542
PshAI	GACNNNNGTC	1 cut(s)	296
PshBI	ATTAAT	1 cut(s)	1529
PsiI	TTATAA	1 cut(s)	738
Psp6I	CCWGG	5 cut(s)	159, 1066, 1678, 1695, 1869
PspGI	CCWGG	5 cut(s)	159, 1066, 1678, 1695, 1869
PspOMI	GGGCCC	1 cut(s)	270
PspPI	GGNCC	5 cut(s)	270, 271, 389, 744, 1550
PstNI	CAGNNNCTG	2 cut(s)	747, 791
PsuI	RGATCY	1 cut(s)	8
PvuII	CAGCTG	2 cut(s)	1143, 1967
RsaI	GTAC	8 cut(s)	731, 1155, 1185, 1281, 1350, 1603, 1713, 1888
RsaNI	GTAC	8 cut(s)	730, 1154, 1184, 1280, 1349, 1602, 1712, 1887
RseI	CAYNNNNRTG	4 cut(s)	541, 630, 1256, 1739
SatI	GCNGC	3 cut(s)	1141, 1845, 2168
Sau3AI	GATC	6 cut(s)	8, 668, 782, 804, 1522, 1726
Sau96I	GGNCC	5 cut(s)	270, 271, 389, 744, 1550
ScaI	AGTACT	2 cut(s)	731, 1155
SchI	GAGTC	1 cut(s)	306
ScrFI	CCNGG	5 cut(s)	161, 1068, 1680, 1697, 1871
SduI	GDGCHC	5 cut(s)	274, 655, 949, 1749, 2053
SfaNI	GCATC	7 cut(s)	24, 40, 83, 1102, 1200, 1296, 1981
SfuI	TTCGAA	2 cut(s)	236, 264
SinI	GGWCC	1 cut(s)	389
SmiMI	CAYNNNNRTG	4 cut(s)	541, 630, 1256, 1739
SmlI	CTYRAG	2 cut(s)	396, 2052
SmoI	CTYRAG	2 cut(s)	396, 2052
SseBI	AGGCCT	1 cut(s)	1922
SsiI	CCGC	5 cut(s)	761, 1049, 1553, 2079, 2168
SspI	AATATT	1 cut(s)	1687
SspMI	CTAG	4 cut(s)	84, 1263, 1271, 1752
StuI	AGGCCT	1 cut(s)	1922
StyD4I	CCNGG	5 cut(s)	159, 1066, 1678, 1695, 1869
StyI	CCWWGG	1 cut(s)	1100
TaaI	ACNGT	6 cut(s)	146, 321, 590, 734, 1079, 1561
TaiI	ACGT	1 cut(s)	886
TaqI	TCGA	2 cut(s)	236, 264
TatI	WGTACW	4 cut(s)	729, 1153, 1601, 1711
TauI	GCSGC	1 cut(s)	2170
TfiI	GAWTC	8 cut(s)	349, 833, 938, 962, 1030, 1385, 1514, 1855
TscAI	CASTG	3 cut(s)	595, 1333, 1650
TseI	GCWGC	2 cut(s)	1140, 1844
TspRI	CASTG	3 cut(s)	595, 1333, 1650
Van91I	CCANNNNNTGG	2 cut(s)	779, 992
VpaK11BI	GGWCC	1 cut(s)	389
VspI	ATTAAT	1 cut(s)	1529
XapI	RAATTY	4 cut(s)	212, 381, 410, 2010
XbaI	TCTAGA	1 cut(s)	83
XceI	RCATGY	2 cut(s)	546, 1866
XcmI	CCANNNNNNNNNTGG	1 cut(s)	431
XmnI	GAANNNNTTC	3 cut(s)	459, 1513, 1665
XspI	CTAG	4 cut(s)	84, 1263, 1271, 1752
ZrmI	AGTACT	2 cut(s)	731, 1155
Zsp2I	ATGCAT	1 cut(s)	76

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.