Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0007453

Physical Location & Seq

Genomic Coordinates Reverse (-)

1813536 .. 1821295

Gene Structure 7760 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g02060.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2475 bp

ATGGGTAGTGTAGTAGTACTAAGCAAAGCCAATGCCACCTTGAATTGGTGCGTCAACGCCTTTCTTCCAAGATACCCTCCTCCCCCTCCTCCTATTATATCTCTCCTTTCTTCCACTCCCACACTCTCTCGCTCTCTTCTCTCTACTAAAAGATTCTCAACCATGGATGGTTCTAAAGCTAGCCCAACGAAGGAGTTGGCCCTGGGAATAGATGAAACAACTGAGGAAGAATATGCTTCACAGTCTAGGTTACTTCAAGAATTCACTAATATAGCCAGCATTGACAAGGCATGGATAATACCTGGCAGTGGAAATGGCTCCCAGGCAATGTTCTCGTTTAGTCAACCAAACGTTATGGCAAACAAGAGCAGGAAATTTATTCTATCATCTCATATCTCGAAAGAAAGTAGCAAATCGGTGAACTTCCAATGGGGCCCATTTCCTATTGAGATGACGGGAGTCTCTGTAATTGTACCATCACCATCAGGTGCAAAGCTTCTTGTAGTTCGTAATCCTGAAAAAGACTCTCCCTGTCAATTCGAAATTTGGGGTCCAGCTCAAGTAGAAAAGGAATTCCATATTCCCCCAACTGTTCATGGCTCAGTATATACTGATGGCTGGTTTCAGGGAATTTCTTGGAACTCTGATGAAACTCTCATCGCTTATGTTGCTGAGGAGCCATCTCCCTCCAAGCCTACATTTACATTTCAGGGCTATAAGAAAGGTAGTTCCACTGATAAGGAATTTGGCAACTGGAAAGGCCAAGGGGAGTGGGAGGAGGAATGGGGGGAAACCTATGCTGGAAAAAGGCAACCTGCACTCTTTGTCATAAATGTTAACAGTGGAGAGACACAAGCTGTTAAAGGAATCGAAAAGCGTTTGAGTGTTGGCCAAGTTGTTTGGGCCCCACCAATTAGTGGATCCCATCAATATTTGGTTTTTGTTGGGTGGTCAGCAGATACCAGAAAGCTAGGTATGGTGTATTGTTATAACAGACCCTGTGCTTTGTATGCAGTTAAGGCACCGCTTTATGGATCAGAAGCTGATGGACAAGAAATCAAAGATAATTCAACTGAAGATTGTCCTGTGGTAAATCTAACGCAAAGCATTAGTAGCGCTTTCTTTCCAAGATTCAGCCCAGATGGCAAATTGCTTTTGTTTTTATCGGCAAGAAGTTCTGTGGATTCCGGGGCACATTCTGCTACAGATTCTCTTCACAAATTTGATTGGCCAGTGGATGGAGTGCCATGCTCATCTATGGAAGTTGTTGATGTGATTCCTGTTGTAATGTGTGCGGATGATGGTTGCTTCCCTGGGCTTTACTGTTCAAGTTTCCTCACAAACCCATGGCTTTCTGATGGATGCACGATGATTATGTCTTCCTTCTGGGGCAGCTGTCAAGTGATACTTTCTGTGAATGTGTTAAGCGGAGAAGTATCACGCATCAGCCCCACTGATTCAAATTCATGGAATGTTCTTTCATTGGATGGGGACAATATTGTTACTGTGTCCAGCAGTCCAGTACATGTGCCTCACATCAAGTATGGTTTTCTTGATAAAGAAAGTAAAAGTACTGCATGGAATTGGTTAGATGTACCGAGCCCCACAAATGAATGCTCTGGAAAGGTTAAATCATTGCTCTCATCTCTACAGTTCAGTATAATGAAGATTCCTGTCAAGGATGTTTCTGATAGCCTAACAAAAGGTGCTAGAAAACCTTTTGAAGCTATTTTTGTCTCTTCCAAAGCTAAAAGAACTGATCCAATTGATCCATTAATTGTAATCCTTCACGGTGGCCCACATTCTGTTTATTTGACAAGCTTTTCAAAGAACCTGGCATTTCTATCTTCAATTGGGTTCAACTTGCTACTTGTAAATTATCGAGGTTCAGTGGGCTTTGGTGAGGAAGCACTTCAATCACTTCCGGGGAAAGTTGGCTCCCAGGATGTAAATGATGTACTGGTGGCTATAGATCATGTGATTGACTTGGGGCTTGCTAGTCCATCAAAAATTGCAGTTCTTGGTGGTTCTCATGGTGGCTTTTTAACAACTCACTTGATCGGCCAGGCACCAGAGAAGTTTGCTGCGGCTTGTGCAAGGAATCCTGTTTGTAACCTTGCACTGATGGTTGGTACAACAGACATCCCTGATTGGTGCTATGTGGAGGCATATGGAAGTGAAGGTAAAAATATCTACTCAGAAGCACCTTCAGCTGAGGATCTGGCTCTTTTTCACAGCAAGTCTCCTATTTCACATATTTTGAAGGTCAAAACACCCACCCTTTTTCTTTTGGGTGCTCAGGATCTTCGTGTTCCGATTTCCACTGGATTGCAATATGCTCGAGCATTGAAGGACAAAGGAGTTGCTGTCAAAGTCATTATGTTCCCTAATGATATCCATCCAATTGACAGGCCTCAATCCGACTTTGAGAGCTTTCTTAATATCGGCGTGTGGTTTAAGAAATATTTGTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004177 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0008238 GO:0009507 GO:0009536 GO:0009987 GO:0016043 GO:0016787 GO:0017171 GO:0019538 GO:0022607 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0051259 GO:0051260 GO:0051262 GO:0051289 GO:0065003 GO:0070008 GO:0070009 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PD40 Peptidase_S9

Protein Analysis

825

Amino Acids

89.6

Weight (kDa)

5.87

Isoelectric Point (pI)

45.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
APEH_N	PF19283	64 - 544	2e-251	Acylamino-acid-releasing enzyme, N-terminal domain
Abhydrolase_1	PF00561	591 - 707	6.7e-07	alpha/beta hydrolase fold
Peptidase_S9	PF00326	607 - 823	1.2e-36	Prolyl oligopeptidase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007453)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14570
fragaria_vesca	FvH4_4g02060 FvH4_4g02162
malus_domestica	MD13G1203600.v1.1 MD16G1205300.v1.1 MD16G1205600.v1.1
prunus_persica	Prupe.1G026800_v2.0.a1
pyrus_communis	pycom13g17690 pycom16g17300 pycom16g17310
rosa_chinensis	RchiOBHm_Chr4g0389431 RchiOBHm_Chr4g0389461
rosa_laevigata	RLG00000009980 RLG00000009982
rosa_multiflora	Rmu_sc0002498.1_g000017
rosa_roxburghii	Rroxscaffold_5G00335440 Rroxscaffold_5G00335460
rosa_rugosa	Rorug03G0323200
rosa_samantha	Rh4AG027700 Rh4AG027800 Rh4BG020600 Rh4BG021000 Rh4DG021300 Rh4DG021400
rosa_wichuraiana	Rw4G002010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	990
Acc36I	ACCTGC	1 cut(s)	823
AccB1I	GGYRCC	2 cut(s)	1021, 2068
AccB7I	CCANNNNNTGG	2 cut(s)	917, 1238
AciI	CCGC	4 cut(s)	1025, 1295, 1428, 2087
AclI	AACGTT	1 cut(s)	351
AclWI	GGATC	7 cut(s)	915, 928, 1042, 1754, 1763, 2226, 2310
AcoI	YGGCCR	3 cut(s)	889, 1229, 2062
AcsI	RAATTY	8 cut(s)	260, 374, 543, 572, 630, 743, 1220, 1462
AcuI	CTGAAG	2 cut(s)	1095, 2193
AfaI	GTAC	7 cut(s)	18, 474, 1524, 1573, 1596, 1959, 2134
AfeI	AGCGCT	1 cut(s)	1117
AfiI	CCNNNNNNNGG	6 cut(s)	45, 190, 308, 917, 1031, 1238
AflIII	ACRYGT	1 cut(s)	1525
AjnI	CCWGG	7 cut(s)	201, 301, 321, 1312, 1833, 1941, 2064
Alw21I	GWGCWC	1 cut(s)	2299
Alw26I	GTCTC	4 cut(s)	466, 842, 1741, 2247
AlwI	GGATC	7 cut(s)	915, 928, 1042, 1754, 1763, 2226, 2310
AlwNI	CAGNNNCTG	2 cut(s)	999, 1043
Ama87I	CYCGRG	1 cut(s)	2340
Aor51HI	AGCGCT	1 cut(s)	1117
AoxI	GGCC	9 cut(s)	198, 433, 760, 889, 903, 1229, 1795, 2062, 2411
ApaI	GGGCCC	2 cut(s)	437, 907
ApeKI	GCWGC	2 cut(s)	1392, 2084
ApoI	RAATTY	8 cut(s)	260, 374, 543, 572, 630, 743, 1220, 1462
AseI	ATTAAT	1 cut(s)	1775
Asp700I	GAANNNNTTC	1 cut(s)	1911
AspLEI	GCGC	1 cut(s)	1118
AspS9I	GGNCC	7 cut(s)	199, 433, 434, 551, 903, 904, 1796
AsuC2I	CCSGG	2 cut(s)	1189, 1926
AsuHPI	GGTGA	3 cut(s)	430, 471, 1913
AsuII	TTCGAA	1 cut(s)	540
AsuNHI	GCTAGC	1 cut(s)	179
AvaI	CYCGRG	1 cut(s)	2340
AvaII	GGWCC	1 cut(s)	551
BaeGI	GKGCMC	3 cut(s)	437, 907, 1195
BalI	TGGCCA	2 cut(s)	891, 1231
BamHI	GGATCC	1 cut(s)	920
BanI	GGYRCC	2 cut(s)	1021, 2068
BanII	GRGCYC	3 cut(s)	437, 907, 1604
BbsI	GAAGAC	1 cut(s)	1371
Bbv12I	GWGCWC	1 cut(s)	2299
BbvCI	CCTCAGC	2 cut(s)	672, 2214
BbvI	GCAGC	2 cut(s)	1404, 2071
BcgI	CGANNNNNNTGC	4 cut(s)	315, 349, 2321, 2355
BciT130I	CCWGG	7 cut(s)	203, 303, 323, 1314, 1835, 1943, 2066
BcnI	CCSGG	2 cut(s)	1189, 1926
BcoDI	GTCTC	4 cut(s)	466, 842, 1741, 2247
BfaI	CTAG	6 cut(s)	180, 246, 971, 1710, 1998, 2473
BfmI	CTRYAG	3 cut(s)	1203, 1649, 1968
BfoI	RGCGCY	1 cut(s)	1119
BfuAI	ACCTGC	1 cut(s)	823
BglI	GCCNNNNNGGC	1 cut(s)	1143
BisI	GCNGC	3 cut(s)	1393, 2085, 2088
BlsI	GCNGC	3 cut(s)	1394, 2086, 2089
BmcAI	AGTACT	2 cut(s)	18, 1573
Bme1390I	CCNGG	9 cut(s)	203, 303, 323, 1189, 1314, 1835, 1926, 1943, 2066
Bme18I	GGWCC	1 cut(s)	551
BmeT110I	CYCGRG	1 cut(s)	2340
BmgT120I	GGNCC	7 cut(s)	199, 433, 434, 551, 903, 904, 1796
BmrFI	CCNGG	9 cut(s)	203, 303, 323, 1189, 1314, 1835, 1926, 1943, 2066
BmsI	GCATC	2 cut(s)	1352, 1452
BmtI	GCTAGC	1 cut(s)	183
BoxI	GACNNNNGTC	1 cut(s)	458
BpiI	GAAGAC	1 cut(s)	1371
Bpu10I	CCTNAGC	3 cut(s)	672, 2214, 2298
Bpu14I	TTCGAA	1 cut(s)	540
BpuEI	CTTGAG	1 cut(s)	543
BpuMI	CCSGG	2 cut(s)	1189, 1926
BsaBI	GATNNNNATC	1 cut(s)	2397
BsaXI	ACNNNNNCTCC	4 cut(s)	450, 480, 2352, 2382
Bsc4I	CCNNNNNNNGG	6 cut(s)	45, 190, 308, 917, 1031, 1238
Bse1I	ACTGG	5 cut(s)	758, 1232, 1520, 1965, 2329
Bse3DI	GCAATG	2 cut(s)	333, 1634
Bse8I	GATNNNNATC	1 cut(s)	2397
BseBI	CCWGG	7 cut(s)	203, 303, 323, 1314, 1835, 1943, 2066
BseGI	GGATG	9 cut(s)	172, 1243, 1303, 1367, 1492, 1687, 1951, 2142, 2398
BseJI	GATNNNNATC	1 cut(s)	2397
BseLI	CCNNNNNNNGG	6 cut(s)	45, 190, 308, 917, 1031, 1238
BseMI	GCAATG	2 cut(s)	333, 1634
BseMII	CTCAG	6 cut(s)	213, 615, 663, 2205, 2211, 2312
BseNI	ACTGG	5 cut(s)	758, 1232, 1520, 1965, 2329
BseRI	GAGGAG	4 cut(s)	69, 78, 689, 791
BseSI	GKGCMC	3 cut(s)	437, 907, 1195
BseXI	GCAGC	2 cut(s)	1404, 2071
BsgI	GTGCAG	1 cut(s)	801
BshFI	GGCC	9 cut(s)	200, 435, 762, 891, 905, 1231, 1797, 2064, 2413
BshNI	GGYRCC	2 cut(s)	1021, 2068
BsiHKAI	GWGCWC	1 cut(s)	2299
BsiHKCI	CYCGRG	1 cut(s)	2340
BsiSI	CCGG	2 cut(s)	1188, 1925
BslFI	GGGAC	1 cut(s)	1505
BslI	CCNNNNNNNGG	6 cut(s)	45, 190, 308, 917, 1031, 1238
BsmAI	GTCTC	4 cut(s)	466, 842, 1741, 2247
BsmFI	GGGAC	1 cut(s)	1505
BsmI	GAATGC	1 cut(s)	1619
BsnI	GGCC	9 cut(s)	200, 435, 762, 891, 905, 1231, 1797, 2064, 2413
BsoBI	CYCGRG	1 cut(s)	2340
Bsp119I	TTCGAA	1 cut(s)	540
Bsp120I	GGGCCC	2 cut(s)	433, 903
Bsp1286I	GDGCHC	5 cut(s)	437, 907, 1195, 1604, 2299
Bsp143I	GATC	8 cut(s)	920, 1034, 1759, 1768, 1972, 2058, 2218, 2302
Bsp19I	CCATGG	2 cut(s)	162, 1346
BspACI	CCGC	4 cut(s)	1025, 1295, 1428, 2087
BspANI	GGCC	9 cut(s)	200, 435, 762, 891, 905, 1231, 1797, 2064, 2413
BspCNI	CTCAG	6 cut(s)	214, 614, 664, 2206, 2210, 2311
BspMI	ACCTGC	1 cut(s)	823
BspOI	GCTAGC	1 cut(s)	183
BspPI	GGATC	7 cut(s)	915, 928, 1042, 1754, 1763, 2226, 2310
BspT104I	TTCGAA	1 cut(s)	540
BspT107I	GGYRCC	2 cut(s)	1021, 2068
BsrDI	GCAATG	2 cut(s)	333, 1634
BsrI	ACTGG	5 cut(s)	758, 1232, 1520, 1965, 2329
BssMI	GATC	8 cut(s)	920, 1034, 1759, 1768, 1972, 2058, 2218, 2302
BssT1I	CCWWGG	3 cut(s)	162, 763, 1346
Bst2UI	CCWGG	7 cut(s)	203, 303, 323, 1314, 1835, 1943, 2066
Bst4CI	ACNGT	7 cut(s)	243, 592, 842, 1325, 1507, 1653, 1793
Bst6I	CTCTTC	3 cut(s)	141, 1218, 1744
BstAPI	GCANNNNNTGC	1 cut(s)	1199
BstBI	TTCGAA	1 cut(s)	540
BstC8I	GCNNGC	3 cut(s)	181, 277, 1995
BstDEI	CTNAG	7 cut(s)	20, 222, 601, 672, 2197, 2214, 2298
BstDSI	CCRYGG	2 cut(s)	162, 1346
BstF5I	GGATG	9 cut(s)	172, 1243, 1303, 1367, 1492, 1687, 1951, 2142, 2398
BstH2I	RGCGCY	1 cut(s)	1119
BstHHI	GCGC	1 cut(s)	1118
BstKTI	GATC	8 cut(s)	923, 1037, 1762, 1771, 1975, 2061, 2221, 2305
BstMAI	GTCTC	4 cut(s)	466, 842, 1741, 2247
BstMBI	GATC	8 cut(s)	920, 1034, 1759, 1768, 1972, 2058, 2218, 2302
BstMWI	GCNNNNNNNGC	8 cut(s)	668, 1010, 1019, 1113, 1143, 1199, 2093, 2210
BstNI	CCWGG	7 cut(s)	203, 303, 323, 1314, 1835, 1943, 2066
BstNSI	RCATGY	1 cut(s)	1529
BstPAI	GACNNNNGTC	1 cut(s)	458
BstSCI	CCNGG	9 cut(s)	201, 301, 321, 1187, 1312, 1833, 1924, 1941, 2064
BstSFI	CTRYAG	3 cut(s)	1203, 1649, 1968
BstSLI	GKGCMC	3 cut(s)	437, 907, 1195
BstV1I	GCAGC	2 cut(s)	1404, 2071
BstV2I	GAAGAC	1 cut(s)	1371
BstX2I	RGATCY	3 cut(s)	920, 2218, 2302
BstYI	RGATCY	3 cut(s)	920, 2218, 2302
BsuRI	GGCC	9 cut(s)	200, 435, 762, 891, 905, 1231, 1797, 2064, 2413
BtgI	CCRYGG	2 cut(s)	162, 1346
BtgZI	GCGATG	1 cut(s)	643
BtsCI	GGATG	9 cut(s)	172, 1243, 1303, 1367, 1492, 1687, 1951, 2142, 2398
BtsI	GCAGTG	1 cut(s)	313
BtsIMutI	CAGTG	8 cut(s)	313, 732, 847, 1239, 1452, 1896, 2120, 2322
BveI	ACCTGC	1 cut(s)	823
Cac8I	GCNNGC	3 cut(s)	181, 277, 1995
CaiI	CAGNNNCTG	2 cut(s)	999, 1043
CfoI	GCGC	1 cut(s)	1118
Cfr13I	GGNCC	7 cut(s)	199, 433, 434, 551, 903, 904, 1796
CseI	GACGC	1 cut(s)	40
Csp6I	GTAC	7 cut(s)	17, 473, 1523, 1572, 1595, 1958, 2133
CspCI	CAANNNNNGTGG	2 cut(s)	752, 787
CviQI	GTAC	7 cut(s)	17, 473, 1523, 1572, 1595, 1958, 2133
DdeI	CTNAG	7 cut(s)	20, 222, 601, 672, 2197, 2214, 2298
DpnI	GATC	8 cut(s)	922, 1036, 1761, 1770, 1974, 2060, 2220, 2304
DpnII	GATC	8 cut(s)	920, 1034, 1759, 1768, 1972, 2058, 2218, 2302
EaeI	YGGCCR	3 cut(s)	889, 1229, 2062
Eam1104I	CTCTTC	3 cut(s)	141, 1218, 1744
EarI	CTCTTC	3 cut(s)	141, 1218, 1744
Eco130I	CCWWGG	3 cut(s)	162, 763, 1346
Eco147I	AGGCCT	1 cut(s)	2413
Eco24I	GRGCYC	3 cut(s)	437, 907, 1604
Eco32I	GATATC	1 cut(s)	2395
Eco47I	GGWCC	1 cut(s)	551
Eco47III	AGCGCT	1 cut(s)	1117
Eco57I	CTGAAG	2 cut(s)	1095, 2193
Eco88I	CYCGRG	1 cut(s)	2340
EcoO109I	RGGNCCY	2 cut(s)	433, 904
EcoRI	GAATTC	2 cut(s)	260, 572
EcoRII	CCWGG	7 cut(s)	201, 301, 321, 1312, 1833, 1941, 2064
EcoRV	GATATC	1 cut(s)	2395
EcoT14I	CCWWGG	3 cut(s)	162, 763, 1346
EcoT38I	GRGCYC	3 cut(s)	437, 907, 1604
ErhI	CCWWGG	3 cut(s)	162, 763, 1346
FalI	AAGNNNNNCTT	2 cut(s)	1392, 1424
FaqI	GGGAC	1 cut(s)	1505
FauNDI	CATATG	1 cut(s)	2170
Fnu4HI	GCNGC	3 cut(s)	1393, 2085, 2088
FokI	GGATG	9 cut(s)	179, 1250, 1310, 1374, 1499, 1694, 1958, 2129, 2385
FriOI	GRGCYC	3 cut(s)	437, 907, 1604
Fsp4HI	GCNGC	3 cut(s)	1393, 2085, 2088
FspBI	CTAG	6 cut(s)	180, 246, 971, 1710, 1998, 2473
GlaI	GCGC	1 cut(s)	1117
GluI	GCNGC	3 cut(s)	1393, 2085, 2088
HaeII	RGCGCY	1 cut(s)	1119
HaeIII	GGCC	9 cut(s)	200, 435, 762, 891, 905, 1231, 1797, 2064, 2413
HapII	CCGG	2 cut(s)	1188, 1925
HgaI	GACGC	1 cut(s)	40
HhaI	GCGC	1 cut(s)	1118
Hin6I	GCGC	1 cut(s)	1116
HinP1I	GCGC	1 cut(s)	1116
HincII	GTYRAC	3 cut(s)	55, 344, 838
HindII	GTYRAC	3 cut(s)	55, 344, 838
HindIII	AAGCTT	2 cut(s)	494, 1819
HpaI	GTTAAC	1 cut(s)	838
HpaII	CCGG	2 cut(s)	1188, 1925
HphI	GGTGA	3 cut(s)	430, 471, 1913
Hpy166II	GTNNAC	4 cut(s)	55, 344, 421, 838
Hpy188I	TCNGA	7 cut(s)	646, 1039, 1357, 1690, 2200, 2316, 2422
Hpy188III	TCNNGA	6 cut(s)	257, 397, 515, 1553, 1620, 2300
Hpy8I	GTNNAC	4 cut(s)	55, 344, 421, 838
HpyAV	CCTTC	7 cut(s)	184, 1393, 1796, 2174, 2217, 2257, 2344
HpyCH4III	ACNGT	7 cut(s)	243, 592, 842, 1325, 1507, 1653, 1793
HpyCH4IV	ACGT	1 cut(s)	351
HpyCH4V	TGCA	9 cut(s)	491, 818, 1013, 1365, 1577, 2015, 2096, 2120, 2332
HpyF10VI	GCNNNNNNNGC	8 cut(s)	668, 1010, 1019, 1113, 1143, 1199, 2093, 2210
HpyF3I	CTNAG	7 cut(s)	20, 222, 601, 672, 2197, 2214, 2298
HpySE526I	ACGT	1 cut(s)	351
HspAI	GCGC	1 cut(s)	1116
KspAI	GTTAAC	1 cut(s)	838
Kzo9I	GATC	8 cut(s)	920, 1034, 1759, 1768, 1972, 2058, 2218, 2302
LmnI	GCTCC	3 cut(s)	323, 676, 1943
Lsp1109I	GCAGC	2 cut(s)	1404, 2071
LweI	GCATC	2 cut(s)	1352, 1452
MaeI	CTAG	6 cut(s)	180, 246, 971, 1710, 1998, 2473
MaeII	ACGT	1 cut(s)	351
MaeIII	GTNAC	3 cut(s)	249, 1501, 2111
MalI	GATC	8 cut(s)	922, 1036, 1761, 1770, 1974, 2060, 2220, 2304
MboI	GATC	8 cut(s)	920, 1034, 1759, 1768, 1972, 2058, 2218, 2302
MfeI	CAATTG	3 cut(s)	1764, 1851, 2403
MflI	RGATCY	3 cut(s)	920, 2218, 2302
MhlI	GDGCHC	5 cut(s)	437, 907, 1195, 1604, 2299
MlsI	TGGCCA	2 cut(s)	891, 1231
MluNI	TGGCCA	2 cut(s)	891, 1231
MlyI	GAGTC	2 cut(s)	468, 518
MmeI	TCCRAC	1 cut(s)	2445
Mox20I	TGGCCA	2 cut(s)	891, 1231
MroXI	GAANNNNTTC	1 cut(s)	1911
MscI	TGGCCA	2 cut(s)	891, 1231
MseI	TTAA	9 cut(s)	837, 861, 1017, 1424, 1629, 1775, 2045, 2439, 2457
Msp20I	TGGCCA	2 cut(s)	891, 1231
MspA1I	CMGCKG	2 cut(s)	1395, 2213
MspI	CCGG	2 cut(s)	1188, 1925
MspR9I	CCNGG	9 cut(s)	203, 303, 323, 1189, 1314, 1835, 1926, 1943, 2066
MunI	CAATTG	3 cut(s)	1764, 1851, 2403
Mva1269I	GAATGC	1 cut(s)	1619
MvaI	CCWGG	7 cut(s)	203, 303, 323, 1314, 1835, 1943, 2066
MwoI	GCNNNNNNNGC	8 cut(s)	668, 1010, 1019, 1113, 1143, 1199, 2093, 2210
NciI	CCSGG	2 cut(s)	1189, 1926
NcoI	CCATGG	2 cut(s)	162, 1346
NdeI	CATATG	1 cut(s)	2170
NdeII	GATC	8 cut(s)	920, 1034, 1759, 1768, 1972, 2058, 2218, 2302
NheI	GCTAGC	1 cut(s)	179
NspI	RCATGY	1 cut(s)	1529
NspV	TTCGAA	1 cut(s)	540
PaeR7I	CTCGAG	1 cut(s)	2340
PasI	CCCWGGG	2 cut(s)	202, 1313
PceI	AGGCCT	1 cut(s)	2413
PciI	ACATGT	1 cut(s)	1525
PctI	GAATGC	1 cut(s)	1619
PdmI	GAANNNNTTC	1 cut(s)	1911
PfeI	GAWTC	9 cut(s)	153, 867, 1131, 1184, 1208, 1276, 1457, 1669, 2101
PflMI	CCANNNNNTGG	2 cut(s)	917, 1238
PkrI	GCNGC	3 cut(s)	1394, 2086, 2089
PleI	GAGTC	2 cut(s)	467, 518
PpsI	GAGTC	2 cut(s)	467, 518
PscI	ACATGT	1 cut(s)	1525
PshAI	GACNNNNGTC	1 cut(s)	458
PshBI	ATTAAT	1 cut(s)	1775
PsiI	TTATAA	1 cut(s)	990
Psp1406I	AACGTT	1 cut(s)	351
Psp6I	CCWGG	7 cut(s)	201, 301, 321, 1312, 1833, 1941, 2064
PspGI	CCWGG	7 cut(s)	201, 301, 321, 1312, 1833, 1941, 2064
PspOMI	GGGCCC	2 cut(s)	433, 903
PspPI	GGNCC	7 cut(s)	199, 433, 434, 551, 903, 904, 1796
PspXI	VCTCGAGB	1 cut(s)	2340
PstNI	CAGNNNCTG	2 cut(s)	999, 1043
PsuI	RGATCY	3 cut(s)	920, 2218, 2302
PvuII	CAGCTG	2 cut(s)	1395, 2213
RsaI	GTAC	7 cut(s)	18, 474, 1524, 1573, 1596, 1959, 2134
RsaNI	GTAC	7 cut(s)	17, 473, 1523, 1572, 1595, 1958, 2133
SaqAI	TTAA	9 cut(s)	837, 861, 1017, 1424, 1629, 1775, 2045, 2439, 2457
SatI	GCNGC	3 cut(s)	1393, 2085, 2088
Sau3AI	GATC	8 cut(s)	920, 1034, 1759, 1768, 1972, 2058, 2218, 2302
Sau96I	GGNCC	7 cut(s)	199, 433, 434, 551, 903, 904, 1796
ScaI	AGTACT	2 cut(s)	18, 1573
SchI	GAGTC	2 cut(s)	468, 518
ScrFI	CCNGG	9 cut(s)	203, 303, 323, 1189, 1314, 1835, 1926, 1943, 2066
SduI	GDGCHC	5 cut(s)	437, 907, 1195, 1604, 2299
SfaNI	GCATC	2 cut(s)	1352, 1452
SfcI	CTRYAG	3 cut(s)	1203, 1649, 1968
Sfr274I	CTCGAG	1 cut(s)	2340
SfuI	TTCGAA	1 cut(s)	540
SinI	GGWCC	1 cut(s)	551
SlaI	CTCGAG	1 cut(s)	2340
SmlI	CTYRAG	2 cut(s)	558, 2340
SmoI	CTYRAG	2 cut(s)	558, 2340
SseBI	AGGCCT	1 cut(s)	2413
SsiI	CCGC	4 cut(s)	1025, 1295, 1428, 2087
SspI	AATATT	3 cut(s)	932, 1498, 2465
SspMI	CTAG	6 cut(s)	180, 246, 971, 1710, 1998, 2473
StuI	AGGCCT	1 cut(s)	2413
StyD4I	CCNGG	9 cut(s)	201, 301, 321, 1187, 1312, 1833, 1924, 1941, 2064
StyI	CCWWGG	3 cut(s)	162, 763, 1346
TaaI	ACNGT	7 cut(s)	243, 592, 842, 1325, 1507, 1653, 1793
TaiI	ACGT	1 cut(s)	354
TaqI	TCGA	5 cut(s)	398, 540, 870, 1882, 2341
TatI	WGTACW	4 cut(s)	16, 1522, 1571, 1957
TauI	GCSGC	1 cut(s)	2090
TfiI	GAWTC	9 cut(s)	153, 867, 1131, 1184, 1208, 1276, 1457, 1669, 2101
Tru1I	TTAA	9 cut(s)	837, 861, 1017, 1424, 1629, 1775, 2045, 2439, 2457
Tru9I	TTAA	9 cut(s)	837, 861, 1017, 1424, 1629, 1775, 2045, 2439, 2457
TscAI	CASTG	8 cut(s)	313, 739, 847, 1239, 1459, 1896, 2127, 2329
TseI	GCWGC	2 cut(s)	1392, 2084
TspDTI	ATGAA	7 cut(s)	228, 584, 663, 1455, 1470, 1626, 1679
TspRI	CASTG	8 cut(s)	313, 739, 847, 1239, 1459, 1896, 2127, 2329
Van91I	CCANNNNNTGG	2 cut(s)	917, 1238
VpaK11BI	GGWCC	1 cut(s)	551
VspI	ATTAAT	1 cut(s)	1775
XapI	RAATTY	8 cut(s)	260, 374, 543, 572, 630, 743, 1220, 1462
XceI	RCATGY	1 cut(s)	1529
XhoI	CTCGAG	1 cut(s)	2340
XmnI	GAANNNNTTC	1 cut(s)	1911
XspI	CTAG	6 cut(s)	180, 246, 971, 1710, 1998, 2473
ZrmI	AGTACT	2 cut(s)	18, 1573

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.