Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0007453

Physical Location & Seq

Genomic Coordinates Reverse (-)

2817783 .. 2827091

Gene Structure 9309 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00335440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2523 bp

ATGGGCAGTGTAGCGGTACTAAGCAAAGCCAATGCCTCTTTGAATTGGTGCGTCAACGCCCTTCTTCCAAGATACCCTCCTTCTCCTCCTATTATATCTCACCTTTCTTCCACTTCCAGACTCTTTCGCTCTCTTCTCTCTACTAAAAGATTCTCAACCATGGATGGTTCTAAAGCTAGCGCATTGAACGAGATGCCTCTTGGAATAGATGAAACTACGGAGGAAGAATATGCTTCGCAGTCTAGGTTACTTCAAGAATTCCATAGTATATCCAGCATTGACAAGGCATGGATAAAACCTGGAAGTGGAAATGGCTCCCAGGCAATGTTTTCATTTAGTCAACCAAATCTCTTGGCAAACAAGATGAGGAAATTTATTTTATCATCTCATATTTTGAAAGAAAGTAGCAACTCGGTAAACTTCCAATGGGGCCCATTTCCTGTTGAGATGACGGGAGTCTCTGTAATTGTTCCATCACCATCAGGTGCAAAGCTTCTTGTAGTTCGTAATCCTGAAAACGACTCTCCCTGTCAATTTGAAATTTGGGGTCCGGCTCAAGTCGAGAAGGAATTCCATATTCCCCAATCTGTTCATGGCTCAGTATATGCTGATGGCTGGTTTCAGGGAATTTCTTGGAACTCTGATGAAACTCTCATCGCTTATGTTGCTGAGGAACCATCTCCCTCCAAGCCGACATTTACATGTCAGGGCTACACGAAAGGTGGTTCCACTGATAAGGATGTTGGCAACTGGAAAGGCCAAGGGGATTGGATGGAGGATTGGGGGAAACCTATGCTGGAAAAAGGCAGCCTGCACTTTTTTGGAGAGACACAAGCTGTTAAAGGAATTGAAAAGCGTTTGAGTGTTGGCCAAGTTGTGTGGGCCCCACCAATTAGTGGATCCCATCAATATTTGGTTTTTGTTGGGTGGTCAGCAGATACCAGAAAGCTTGGTATCAAGTACTGTTATAACAGGCCCTGTGCATTGTATGCTGTTAAGGCACCACTTCATAAATCAGAAGCTGATGGGACAGAAATCAAAGATAGTTCAACTGATGGTTGTCCTGTGGTAAATCTAACTCAAAGCATTAGTAGTGCTTTCTTTCCACGATTCAGCCCAGATGGAAAATTGCTTTTGTTTTTATCTGCAAAAAGTTCTGTGGATTCTGGGGCCCATTCTGCAACAGATTCTCTTCACAAAATTGATTGGCCAGTGGATGGAGTGCCATGCTCATCTGCAGAAGTTGTTGATGTGGTTATCAGTGGTAGAGCCAAGGATATTCTTCTTACCCAGCAATTGTTCGAGCCTTGGCAATATGTAGTAATGATTCCTGTTGTAATGTGTGCGGATGATGGCTGCTTCCCTGGCCTTTACTGTTCAAGTTTCCTCACTAATCCATGGCTTTCTGATGGATGCACGATGATTATATCTTCCTTCTGGGGCAGCTGTCAAGTGATACTTTCTGTGAATGTGTTGAGCGGACAAGTATCACGCATCAGCCCTACTGATTCAAAATTTTCATGGGATGTTCTTTCACTGGATGGCGACAATATTGTTGCTGTGTCTAGCAGTCCAGTAGATGTACCTCAAATCAAGTATGGTCTTCTTGATGATAAAGAAAGTAAAACTACTGCATGGAATTGGTTAGATGTACCAAGCCCCACAAATGAATGCTCTGAAAAGGTTAAATCATTGCTCTCATCTCTAAAATTCAGTATATTGAAGATTCCTGTTAGGGATGTTTCTGATAGCCTAACGAAAGGTGCTAGAAAACCTTTTGAAGCTACTTTTGTCTCTTCCAAAACTAAAAGAAGTGATCCATTAGTTGTAGTCCTTCATGGTGGCCCACATTCTGTTTATTTGGCAAGCTTTTCAAAGTCCCTGGCTTTTCTCTCTTCAAATGGGTTCAGTTTGTTACATGTAAATTATAGAGGTTCACTGGGCTTTGGTGAGGAAGCACTTCAATCTCTTCCAGGGAAAGTTGGCTCCCAGGATGTAAATGATGTACTGGTGGCTATTGATCATGTCATTGACTTGGGGCTTGCTAGTCCATCAAAAATTGCAGTTCTTGGTGGTTCTCATGGTGGCTTTCTAACAACTCACTTGATTGGCCAGGCACCAGAGAAGTTTGCTGCGGCTTGTGCAAGGAATCCTGTCTGTAACCTTGCATTGATGGTTGGTACATCAGACATCCCTGATTGGTGCTATCTGGAGGCCTTTGGAAGTGAAGGTAAAAGTACCTATTCAGAAGCACCTTCAGCTGAGGATCTGGCTCTTTTTCACAGCAAGTCTCCTATTTCACATATTTCAAAGGTCAAAACACCCACCCTTTTTCTGTTGGGTGCAAAGGATCTTCGTGTTCCGATTTCCACTGGATTGCAGTATGCTCGGGCATTGAAGGAAAAAGGAGTTGTTGTCAAAGTCATTGTGTTCCCTAATGACATCCATCCAATTGACAGGCCTCAATCCGACTTTGAGAGCTTTCTTAATATTGGCGTGTGGTTTAAGAAGTATTTGTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004177 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005773 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0008238 GO:0009507 GO:0009536 GO:0009987 GO:0016043 GO:0016787 GO:0017171 GO:0019538 GO:0022607 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0051259 GO:0051260 GO:0051262 GO:0051289 GO:0065003 GO:0070008 GO:0070009 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PD40 Peptidase_S9

Protein Analysis

840

Amino Acids

91.27

Weight (kDa)

6.19

Isoelectric Point (pI)

41.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
APEH_N	PF19283	64 - 419	5e-178	Acylamino-acid-releasing enzyme, N-terminal domain
APEH_N	PF19283	440 - 563	7.6e-58	Acylamino-acid-releasing enzyme, N-terminal domain
BD-FAE	PF20434	599 - 793	4.8e-08	BD-FAE
Peptidase_S9	PF00326	623 - 839	7.2e-36	Prolyl oligopeptidase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007453)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14570
fragaria_vesca	FvH4_4g02060 FvH4_4g02162
malus_domestica	MD13G1203600.v1.1 MD16G1205300.v1.1 MD16G1205600.v1.1
prunus_persica	Prupe.1G026800_v2.0.a1
pyrus_communis	pycom13g17690 pycom16g17300 pycom16g17310
rosa_chinensis	RchiOBHm_Chr4g0389431 RchiOBHm_Chr4g0389461
rosa_laevigata	RLG00000009980 RLG00000009982
rosa_multiflora	Rmu_sc0002498.1_g000017
rosa_roxburghii	Rroxscaffold_5G00335440 Rroxscaffold_5G00335460
rosa_rugosa	Rorug03G0323200
rosa_samantha	Rh4AG027700 Rh4AG027800 Rh4BG020600 Rh4BG021000 Rh4DG021300 Rh4DG021400
rosa_wichuraiana	Rw4G002010

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	969
AccB1I	GGYRCC	2 cut(s)	1000, 2116
AccB7I	CCANNNNNTGG	2 cut(s)	896, 1217
AccBSI	CCGCTC	1 cut(s)	1479
AciI	CCGC	4 cut(s)	14, 1346, 1479, 2135
AclWI	GGATC	5 cut(s)	894, 907, 1811, 2274, 2358
AcoI	YGGCCR	3 cut(s)	868, 1208, 2110
AcsI	RAATTY	7 cut(s)	257, 371, 540, 569, 627, 1514, 1709
AcuI	CTGAAG	1 cut(s)	2241
AfaI	GTAC	7 cut(s)	18, 962, 1584, 1653, 2007, 2182, 2239
AfiI	CCNNNNNNNGG	3 cut(s)	305, 896, 1217
AflIII	ACRYGT	2 cut(s)	701, 1918
AjnI	CCWGG	7 cut(s)	298, 318, 1363, 1881, 1972, 1989, 2112
Alw26I	GTCTC	4 cut(s)	463, 821, 1798, 2295
AlwI	GGATC	5 cut(s)	894, 907, 1811, 2274, 2358
AlwNI	CAGNNNCTG	2 cut(s)	978, 1022
Ama87I	CYCGRG	1 cut(s)	2388
ApaI	GGGCCC	3 cut(s)	434, 886, 1174
ApeKI	GCWGC	4 cut(s)	807, 1356, 1443, 2132
ApoI	RAATTY	7 cut(s)	257, 371, 540, 569, 627, 1514, 1709
Asp700I	GAANNNNTTC	2 cut(s)	569, 1959
AspLEI	GCGC	1 cut(s)	182
AspS9I	GGNCC	9 cut(s)	430, 431, 548, 882, 883, 975, 1170, 1171, 1844
AsuHPI	GGTGA	3 cut(s)	92, 468, 1961
AsuNHI	GCTAGC	1 cut(s)	176
AvaI	CYCGRG	1 cut(s)	2388
AvaII	GGWCC	1 cut(s)	548
BaeGI	GKGCMC	3 cut(s)	434, 886, 1174
BalI	TGGCCA	3 cut(s)	870, 1210, 2112
BamHI	GGATCC	1 cut(s)	899
BanI	GGYRCC	2 cut(s)	1000, 2116
BanII	GRGCYC	3 cut(s)	434, 886, 1174
BbsI	GAAGAC	1 cut(s)	1595
BbvCI	CCTCAGC	2 cut(s)	669, 2262
BbvI	GCAGC	4 cut(s)	819, 1343, 1455, 2119
BcgI	CGANNNNNNTGC	2 cut(s)	2369, 2403
BciT130I	CCWGG	7 cut(s)	300, 320, 1365, 1883, 1974, 1991, 2114
BclI	TGATCA	1 cut(s)	2020
BcoDI	GTCTC	4 cut(s)	463, 821, 1798, 2295
BfaI	CTAG	6 cut(s)	177, 243, 1566, 1767, 2046, 2521
BfmI	CTRYAG	1 cut(s)	1236
BisI	GCNGC	5 cut(s)	808, 1357, 1444, 2133, 2136
BlsI	GCNGC	5 cut(s)	809, 1358, 1445, 2134, 2137
BmcAI	AGTACT	1 cut(s)	962
Bme1390I	CCNGG	7 cut(s)	300, 320, 1365, 1883, 1974, 1991, 2114
Bme18I	GGWCC	1 cut(s)	548
BmeT110I	CYCGRG	1 cut(s)	2388
BmgT120I	GGNCC	9 cut(s)	430, 431, 548, 882, 883, 975, 1170, 1171, 1844
BmrFI	CCNGG	7 cut(s)	300, 320, 1365, 1883, 1974, 1991, 2114
BmrI	ACTGGG	1 cut(s)	1949
BmsI	GCATC	3 cut(s)	183, 1403, 1503
BmtI	GCTAGC	1 cut(s)	180
BmuI	ACTGGG	1 cut(s)	1949
BoxI	GACNNNNGTC	1 cut(s)	455
BpiI	GAAGAC	1 cut(s)	1595
BpmI	CTGGAG	1 cut(s)	2231
Bpu10I	CCTNAGC	2 cut(s)	669, 2262
BpuEI	CTTGAG	1 cut(s)	540
BsaXI	ACNNNNNCTCC	4 cut(s)	447, 477, 2400, 2430
Bsc4I	CCNNNNNNNGG	3 cut(s)	305, 896, 1217
Bse1I	ACTGG	7 cut(s)	755, 1211, 1542, 1574, 1944, 2013, 2377
Bse3DI	GCAATG	2 cut(s)	330, 1691
BseBI	CCWGG	7 cut(s)	300, 320, 1365, 1883, 1974, 1991, 2114
BseLI	CCNNNNNNNGG	3 cut(s)	305, 896, 1217
BseMI	GCAATG	2 cut(s)	330, 1691
BseMII	CTCAG	3 cut(s)	612, 660, 2253
BseNI	ACTGG	7 cut(s)	755, 1211, 1542, 1574, 1944, 2013, 2377
BseRI	GAGGAG	1 cut(s)	75
BseSI	GKGCMC	3 cut(s)	434, 886, 1174
BseXI	GCAGC	4 cut(s)	819, 1343, 1455, 2119
BseYI	CCCAGC	1 cut(s)	1290
BsgI	GTGCAG	1 cut(s)	797
BshNI	GGYRCC	2 cut(s)	1000, 2116
BsiHKCI	CYCGRG	1 cut(s)	2388
BsiSI	CCGG	1 cut(s)	551
BslFI	GGGAC	2 cut(s)	1042, 1864
BslI	CCNNNNNNNGG	3 cut(s)	305, 896, 1217
BsmAI	GTCTC	4 cut(s)	463, 821, 1798, 2295
BsmFI	GGGAC	2 cut(s)	1042, 1864
BsmI	GAATGC	1 cut(s)	1676
BsoBI	CYCGRG	1 cut(s)	2388
Bsp120I	GGGCCC	3 cut(s)	430, 882, 1170
Bsp1286I	GDGCHC	3 cut(s)	434, 886, 1174
Bsp143I	GATC	5 cut(s)	899, 1816, 2020, 2266, 2350
Bsp19I	CCATGG	2 cut(s)	159, 1397
BspACI	CCGC	4 cut(s)	14, 1346, 1479, 2135
BspCNI	CTCAG	3 cut(s)	611, 661, 2254
BspMAI	CTGCAG	1 cut(s)	1240
BspOI	GCTAGC	1 cut(s)	180
BspPI	GGATC	5 cut(s)	894, 907, 1811, 2274, 2358
BspT107I	GGYRCC	2 cut(s)	1000, 2116
BsrBI	CCGCTC	1 cut(s)	1479
BsrDI	GCAATG	2 cut(s)	330, 1691
BsrI	ACTGG	7 cut(s)	755, 1211, 1542, 1574, 1944, 2013, 2377
BssMI	GATC	5 cut(s)	899, 1816, 2020, 2266, 2350
BssT1I	CCWWGG	5 cut(s)	159, 760, 1272, 1307, 1397
Bst2UI	CCWGG	7 cut(s)	300, 320, 1365, 1883, 1974, 1991, 2114
Bst4CI	ACNGT	2 cut(s)	965, 1376
Bst6I	CTCTTC	5 cut(s)	138, 1197, 1801, 1900, 1974
BstAPI	GCANNNNNTGC	1 cut(s)	989
BstC8I	GCNNGC	4 cut(s)	178, 812, 1867, 2043
BstDEI	CTNAG	4 cut(s)	20, 598, 669, 2262
BstDSI	CCRYGG	2 cut(s)	159, 1397
BstHHI	GCGC	1 cut(s)	182
BstKTI	GATC	5 cut(s)	902, 1819, 2023, 2269, 2353
BstMAI	GTCTC	4 cut(s)	463, 821, 1798, 2295
BstMBI	GATC	5 cut(s)	899, 1816, 2020, 2266, 2350
BstMWI	GCNNNNNNNGC	7 cut(s)	665, 989, 998, 1178, 1365, 2141, 2258
BstNI	CCWGG	7 cut(s)	300, 320, 1365, 1883, 1974, 1991, 2114
BstNSI	RCATGY	2 cut(s)	705, 1922
BstPAI	GACNNNNGTC	1 cut(s)	455
BstSCI	CCNGG	7 cut(s)	298, 318, 1363, 1881, 1972, 1989, 2112
BstSFI	CTRYAG	1 cut(s)	1236
BstSLI	GKGCMC	3 cut(s)	434, 886, 1174
BstV1I	GCAGC	4 cut(s)	819, 1343, 1455, 2119
BstV2I	GAAGAC	1 cut(s)	1595
BstX2I	RGATCY	3 cut(s)	899, 2266, 2350
BstYI	RGATCY	3 cut(s)	899, 2266, 2350
BtgI	CCRYGG	2 cut(s)	159, 1397
BtgZI	GCGATG	1 cut(s)	640
BtsI	GCAGTG	1 cut(s)	13
BtsIMutI	CAGTG	7 cut(s)	13, 729, 1218, 1267, 1535, 1937, 2370
Cac8I	GCNNGC	4 cut(s)	178, 812, 1867, 2043
CaiI	CAGNNNCTG	2 cut(s)	978, 1022
CfoI	GCGC	1 cut(s)	182
Cfr13I	GGNCC	9 cut(s)	430, 431, 548, 882, 883, 975, 1170, 1171, 1844
CseI	GACGC	1 cut(s)	40
Csp6I	GTAC	7 cut(s)	17, 961, 1583, 1652, 2006, 2181, 2238
CspCI	CAANNNNNGTGG	2 cut(s)	860, 895
CviQI	GTAC	7 cut(s)	17, 961, 1583, 1652, 2006, 2181, 2238
DdeI	CTNAG	4 cut(s)	20, 598, 669, 2262
DpnI	GATC	5 cut(s)	901, 1818, 2022, 2268, 2352
DpnII	GATC	5 cut(s)	899, 1816, 2020, 2266, 2350
EaeI	YGGCCR	3 cut(s)	868, 1208, 2110
Eam1104I	CTCTTC	5 cut(s)	138, 1197, 1801, 1900, 1974
EarI	CTCTTC	5 cut(s)	138, 1197, 1801, 1900, 1974
Eco130I	CCWWGG	5 cut(s)	159, 760, 1272, 1307, 1397
Eco147I	AGGCCT	2 cut(s)	2216, 2461
Eco24I	GRGCYC	3 cut(s)	434, 886, 1174
Eco47I	GGWCC	1 cut(s)	548
Eco57I	CTGAAG	1 cut(s)	2241
Eco88I	CYCGRG	1 cut(s)	2388
EcoO109I	RGGNCCY	4 cut(s)	430, 883, 975, 1170
EcoRI	GAATTC	2 cut(s)	257, 569
EcoRII	CCWGG	7 cut(s)	298, 318, 1363, 1881, 1972, 1989, 2112
EcoT14I	CCWWGG	5 cut(s)	159, 760, 1272, 1307, 1397
EcoT38I	GRGCYC	3 cut(s)	434, 886, 1174
ErhI	CCWWGG	5 cut(s)	159, 760, 1272, 1307, 1397
FalI	AAGNNNNNCTT	2 cut(s)	1443, 1475
FaqI	GGGAC	2 cut(s)	1042, 1864
FbaI	TGATCA	1 cut(s)	2020
Fnu4HI	GCNGC	5 cut(s)	808, 1357, 1444, 2133, 2136
FriOI	GRGCYC	3 cut(s)	434, 886, 1174
Fsp4HI	GCNGC	5 cut(s)	808, 1357, 1444, 2133, 2136
FspBI	CTAG	6 cut(s)	177, 243, 1566, 1767, 2046, 2521
GlaI	GCGC	1 cut(s)	181
GluI	GCNGC	5 cut(s)	808, 1357, 1444, 2133, 2136
GsaI	CCCAGC	1 cut(s)	1294
GsuI	CTGGAG	1 cut(s)	2231
HapII	CCGG	1 cut(s)	551
HgaI	GACGC	1 cut(s)	40
HhaI	GCGC	1 cut(s)	182
Hin6I	GCGC	1 cut(s)	180
HinP1I	GCGC	1 cut(s)	180
HincII	GTYRAC	2 cut(s)	55, 341
HindII	GTYRAC	2 cut(s)	55, 341
HindIII	AAGCTT	3 cut(s)	491, 947, 1867
HpaII	CCGG	1 cut(s)	551
HphI	GGTGA	3 cut(s)	92, 468, 1961
Hpy166II	GTNNAC	4 cut(s)	55, 341, 418, 1937
Hpy188I	TCNGA	9 cut(s)	643, 1018, 1408, 1678, 1747, 2188, 2248, 2364, 2470
Hpy188III	TCNNGA	6 cut(s)	117, 254, 512, 562, 1607, 2210
Hpy8I	GTNNAC	4 cut(s)	55, 341, 418, 1937
HpyAV	CCTTC	8 cut(s)	71, 90, 559, 1444, 1844, 2222, 2265, 2392
HpyCH4III	ACNGT	2 cut(s)	965, 1376
HpyF10VI	GCNNNNNNNGC	7 cut(s)	665, 989, 998, 1178, 1365, 2141, 2258
HpyF3I	CTNAG	4 cut(s)	20, 598, 669, 2262
HspAI	GCGC	1 cut(s)	180
Ksp22I	TGATCA	1 cut(s)	2020
Kzo9I	GATC	5 cut(s)	899, 1816, 2020, 2266, 2350
LmnI	GCTCC	2 cut(s)	320, 1991
Lsp1109I	GCAGC	4 cut(s)	819, 1343, 1455, 2119
LweI	GCATC	3 cut(s)	183, 1403, 1503
MaeI	CTAG	6 cut(s)	177, 243, 1566, 1767, 2046, 2521
MaeIII	GTNAC	3 cut(s)	246, 1914, 2159
MalI	GATC	5 cut(s)	901, 1818, 2022, 2268, 2352
MbiI	CCGCTC	1 cut(s)	1479
MboI	GATC	5 cut(s)	899, 1816, 2020, 2266, 2350
MfeI	CAATTG	2 cut(s)	1295, 2451
MflI	RGATCY	3 cut(s)	899, 2266, 2350
MhlI	GDGCHC	3 cut(s)	434, 886, 1174
MlsI	TGGCCA	3 cut(s)	870, 1210, 2112
MluNI	TGGCCA	3 cut(s)	870, 1210, 2112
MlyI	GAGTC	3 cut(s)	114, 465, 515
MmeI	TCCRAC	1 cut(s)	2493
Mox20I	TGGCCA	3 cut(s)	870, 1210, 2112
MroXI	GAANNNNTTC	2 cut(s)	569, 1959
MscI	TGGCCA	3 cut(s)	870, 1210, 2112
MseI	TTAA	5 cut(s)	840, 996, 1686, 2487, 2505
MslI	CAYNNNNRTG	1 cut(s)	700
Msp20I	TGGCCA	3 cut(s)	870, 1210, 2112
MspA1I	CMGCKG	2 cut(s)	1446, 2261
MspI	CCGG	1 cut(s)	551
MspR9I	CCNGG	7 cut(s)	300, 320, 1365, 1883, 1974, 1991, 2114
MunI	CAATTG	2 cut(s)	1295, 2451
Mva1269I	GAATGC	1 cut(s)	1676
MvaI	CCWGG	7 cut(s)	300, 320, 1365, 1883, 1974, 1991, 2114
MwoI	GCNNNNNNNGC	7 cut(s)	665, 989, 998, 1178, 1365, 2141, 2258
NcoI	CCATGG	2 cut(s)	159, 1397
NdeII	GATC	5 cut(s)	899, 1816, 2020, 2266, 2350
NheI	GCTAGC	1 cut(s)	176
NspI	RCATGY	2 cut(s)	705, 1922
PceI	AGGCCT	2 cut(s)	2216, 2461
PciI	ACATGT	2 cut(s)	701, 1918
PctI	GAATGC	1 cut(s)	1676
PdmI	GAANNNNTTC	2 cut(s)	569, 1959
PfeI	GAWTC	8 cut(s)	150, 1110, 1163, 1187, 1327, 1508, 1726, 2149
PflMI	CCANNNNNTGG	2 cut(s)	896, 1217
PkrI	GCNGC	5 cut(s)	809, 1358, 1445, 2134, 2137
PleI	GAGTC	3 cut(s)	114, 464, 515
PpsI	GAGTC	3 cut(s)	114, 464, 515
PscI	ACATGT	2 cut(s)	701, 1918
PshAI	GACNNNNGTC	1 cut(s)	455
PsiI	TTATAA	1 cut(s)	969
Psp6I	CCWGG	7 cut(s)	298, 318, 1363, 1881, 1972, 1989, 2112
PspFI	CCCAGC	1 cut(s)	1290
PspGI	CCWGG	7 cut(s)	298, 318, 1363, 1881, 1972, 1989, 2112
PspOMI	GGGCCC	3 cut(s)	430, 882, 1170
PspPI	GGNCC	9 cut(s)	430, 431, 548, 882, 883, 975, 1170, 1171, 1844
PstI	CTGCAG	1 cut(s)	1240
PstNI	CAGNNNCTG	2 cut(s)	978, 1022
PsuI	RGATCY	3 cut(s)	899, 2266, 2350
PvuII	CAGCTG	2 cut(s)	1446, 2261
RsaI	GTAC	7 cut(s)	18, 962, 1584, 1653, 2007, 2182, 2239
RsaNI	GTAC	7 cut(s)	17, 961, 1583, 1652, 2006, 2181, 2238
RseI	CAYNNNNRTG	1 cut(s)	700
SaqAI	TTAA	5 cut(s)	840, 996, 1686, 2487, 2505
SatI	GCNGC	5 cut(s)	808, 1357, 1444, 2133, 2136
Sau3AI	GATC	5 cut(s)	899, 1816, 2020, 2266, 2350
Sau96I	GGNCC	9 cut(s)	430, 431, 548, 882, 883, 975, 1170, 1171, 1844
ScaI	AGTACT	1 cut(s)	962
SchI	GAGTC	3 cut(s)	114, 465, 515
ScrFI	CCNGG	7 cut(s)	300, 320, 1365, 1883, 1974, 1991, 2114
SduI	GDGCHC	3 cut(s)	434, 886, 1174
SfaNI	GCATC	3 cut(s)	183, 1403, 1503
SfcI	CTRYAG	1 cut(s)	1236
SinI	GGWCC	1 cut(s)	548
SmiMI	CAYNNNNRTG	1 cut(s)	700
SmlI	CTYRAG	1 cut(s)	555
SmoI	CTYRAG	1 cut(s)	555
SseBI	AGGCCT	2 cut(s)	2216, 2461
SsiI	CCGC	4 cut(s)	14, 1346, 1479, 2135
SspI	AATATT	3 cut(s)	911, 1552, 2491
SspMI	CTAG	6 cut(s)	177, 243, 1566, 1767, 2046, 2521
StuI	AGGCCT	2 cut(s)	2216, 2461
StyD4I	CCNGG	7 cut(s)	298, 318, 1363, 1881, 1972, 1989, 2112
StyI	CCWWGG	5 cut(s)	159, 760, 1272, 1307, 1397
TaaI	ACNGT	2 cut(s)	965, 1376
TaqI	TCGA	2 cut(s)	561, 1302
TatI	WGTACW	2 cut(s)	960, 2005
TauI	GCSGC	1 cut(s)	2138
TfiI	GAWTC	8 cut(s)	150, 1110, 1163, 1187, 1327, 1508, 1726, 2149
Tru1I	TTAA	5 cut(s)	840, 996, 1686, 2487, 2505
Tru9I	TTAA	5 cut(s)	840, 996, 1686, 2487, 2505
TscAI	CASTG	7 cut(s)	13, 736, 1218, 1267, 1542, 1944, 2377
TseI	GCWGC	4 cut(s)	807, 1356, 1443, 2132
TspDTI	ATGAA	8 cut(s)	225, 321, 581, 660, 998, 1509, 1683, 1826
TspGWI	ACGGA	1 cut(s)	233
TspRI	CASTG	7 cut(s)	13, 736, 1218, 1267, 1542, 1944, 2377
Van91I	CCANNNNNTGG	2 cut(s)	896, 1217
VpaK11BI	GGWCC	1 cut(s)	548
XapI	RAATTY	7 cut(s)	257, 371, 540, 569, 627, 1514, 1709
XceI	RCATGY	2 cut(s)	705, 1922
XcmI	CCANNNNNNNNNTGG	1 cut(s)	590
XmnI	GAANNNNTTC	2 cut(s)	569, 1959
XspI	CTAG	6 cut(s)	177, 243, 1566, 1767, 2046, 2521
ZrmI	AGTACT	1 cut(s)	962

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.