AT4G20920

Small RNA

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0002993
Physical Location & Seq
Reverse (-)
11193498 .. 11198068
4571 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G20920.5

Sequence Viewer

Length: 2232 bp
ATGGCGGGTGAGGAGAAGCAGACTCTTACTCCAAAGGAGATGATACTTCAGAAGTTTGGTGTTAAAGCAATTTACAGAATTGAGGAAGTTCATGTTTCTTCGAATGATTGCCTCTATCGTTGCCACTTGCAGCTACCAGAATTTTCTGTTGTATCAAATGTCTTCAAGAGAAAAAAGGATTCCGAACAATCTGCTGCTGAATTGGCTCTCGAGAAGCTAGGAATTCAGTCTCAGGATGATGATGATGTTGATATAACTGTGGATGAAGCTTGGAATAATATCGTTGAACGCATTAAGTATATATTTTCTGATGAGTTTCTTTCAGTTGATCATCCTCTAGGAGGTCACCTAAGGGCGGCATTGCAAAGGGATGGCGAACGTTGCGGATCACTTCCTGTTTCTGTCATTGCTACATTTGATGCAAAGATTAACAGTCGCTGTAAAGTGATTGATCCTTCTGTAGAATCAGATCCTATCTTGCTCATGTCCTATGTCATGAAGGCTGCTGCAAAGTTGCCGGACTACATTGTTGTATCTCCGCATGTCGATTCACTCCGAAGGAAAAAACCGTATCCTCCAGCAACTATTAAAGCACTGGCTACTACTCATGTGAAAAGCATAAAAGCTGAGGCTGTGCATTTACAATGTACCGTTGGCGGTGAAGAGGTTGTTAAGCCAGTCACTCTTGATATTTCATCAGGTCGGTATTACTTGGATATTATTGCTGACAAGCTTGGATTGAAGGATGGCAGCCAAGTGATGATATCAAGGACTATTGGCAAAACTTCCTCTGGCTATGAGTGTAGAGTATATGCTGCCATTCCTAAGTTGAAGTCTTCCGATAATTCATGGAAAGCCCGTGAAAAACGTCCAATCATTGAATCATCACATCTTGAAAAGTCTCGGAATGCAAAAGCAAGTTTTGTTTGTGGTGTAGATATTCACGGTGATGCGATCGTGGCATCTGTTGGTTACCCATGGAGGATATGTTGCGGTATTTCTCCTAATGGAATCTATAAATTATCCCGAGAAGCGATAATAGCGGCGCAGTTACCTTTTTCATTCACTACAAAGTCTACTTGGAGAGGTCCATTCCCCAGGGAGATTCTCTGCATGTTCTGCCGCCAGCAACAACTGGTAGAGCCCATTTTTACTATATCTACTGCTCCTGTGAAACCAATGTCTTGCATATTAAGATCCTACCAGAAGTTGAAAGACTCAGAATGTGATGAGAAAGATTCAGAATGTGATGAGAAAGACTCAGAATGTGATGATAGCGAATATCAGTATACGAGCAAGGGAAAAGAGGAGATACCAGAATCAGGGACTGGATATAGATGTGAAGTGAAAATTCTCTCAAAGTCCCAGGATTTGGTTTTAGATTGCTCGTCCAGAAAGTTCTATGAGAAGGAAAACCATGCTATTCAAAATGCTTCGTTGAATGCCCTCTCATGGTTAAGTAGGCTTTTCGACGAGGGGGATGGGGACCCACTGCAAATATGTTATACGGATGATCACCTGGATGCGGTATTTCAACAGAGGATCTTGATGAAAGAGGCTGTTCCAAAGGGACATTTCCGAAATAGAGACGAAATGAATCAATATGAGGATCAAGTTCGTATTCAAACCATAACAAAGGGTTCCTTGGTTAGCATATGCTATTCTGTGTATTTGGATGTAGATGCTGATTTTTCAAAGGATGGTAAATCTAAAAAAGAACTCATCGAAAGCAATGAAGAGATAGAGTTTGAGGTGGGGAATGGTTCTATGAATCCACATCTTGAAGCAGTTGTTACTCAACTGGTTGTGGGCCAATATGCTCGTTTTTTAACTAATGCGCCTGCTGAAGACTTGTTTGTGACTGCTGCCACTGGTACCCAGAGAGATCGTTCACTTTTATCAGATGTCGCAGGTTTTGAATACTGTGTACGTTTGTTGGGAGTGAAAGGGCCAACAGAAAAACGAATTGAGGCGGATTTTTTCAAACCTTCACTTTCAAAACAGCGTCTTGAATATGTAGTGAAACATATTAAAGAATCGTCAGCTTCTACTCTGGTTGATTTTGGATGTGGATCTGGAAGTTTACTAGCATCTATACTTGACTGTCCAACTTCACTTCAAACCATTGCTGGCGTTGACATCTCACATAAGAGTCTTACCCGTGCTGCTAAGATTGCTACATTCAAAAATAAACAAGGGAGCTTGCAACCTCAAATCTACTTTACTCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001510 GO:0002252 GO:0002376 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006379 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0009451 GO:0009605 GO:0009607 GO:0009615 GO:0009616 GO:0009653 GO:0009791 GO:0009892 GO:0009908 GO:0009909 GO:0009954 GO:0009987 GO:0010033 GO:0010051 GO:0010093 GO:0010305 GO:0010467 GO:0010468 GO:0010589 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0016740 GO:0016741 GO:0019222 GO:0022414 GO:0031047 GO:0031050 GO:0032259 GO:0032501 GO:0032502 GO:0034641 GO:0035194 GO:0035195 GO:0035196 GO:0035279 GO:0035821 GO:0040029 GO:0042221 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043331 GO:0043412 GO:0043414 GO:0044003 GO:0044237 GO:0044238 GO:0044260 GO:0044403 GO:0044419 GO:0044424 GO:0044464 GO:0045087 GO:0046483 GO:0048367 GO:0048437 GO:0048444 GO:0048449 GO:0048519 GO:0048580 GO:0048608 GO:0048646 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0051607 GO:0051701 GO:0051704 GO:0051707 GO:0051716 GO:0051817 GO:0052018 GO:0052249 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0098542 GO:0098586 GO:0098795 GO:0099402 GO:0140098 GO:1901360 GO:1901698 GO:1901699 GO:1905392 GO:1905393 GO:2000026 GO:2000241
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FKBP_C Methyltransf_11 Methyltransf_12 Methyltransf_31 dsrm

Protein Analysis

743

Amino Acids

82.85

Weight (kDa)

5.94

Isoelectric Point (pI)

43.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DSRM_2 PF24995 14 - 74 5.5e-10 dsRNA binding domain
Hen1_LCD PF21224 89 - 192 7.8e-49 Small RNA 2'-O-methyltransferase-like, La-motif-containing domain
Hen1_Lam_C PF18441 208 - 328 8.3e-44 Hen1 La-motif C-terminal domain
dsRBD2 PF17842 335 - 490 5.9e-63 Double-stranded RNA binding domain 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1901
Acc65I GGTACC 1 cut(s) 1874
AccB1I GGYRCC 1 cut(s) 1874
AccB7I CCANNNNNTGG 1 cut(s) 1372
AccI GTMKAC 2 cut(s) 1076, 1289
AclI AACGTT 1 cut(s) 379
AclWI GGATC 7 cut(s) 394, 446, 464, 1191, 1550, 1617, 2080
AcsI RAATTY 3 cut(s) 140, 222, 1350
AcuI CTGAAG 2 cut(s) 32, 1866
AfaI GTAC 3 cut(s) 649, 1876, 1929
AfiI CCNNNNNNNGG 6 cut(s) 341, 355, 1322, 1372, 1452, 1525
AjnI CCWGG 3 cut(s) 1097, 1365, 1518
AluBI AGCT 7 cut(s) 133, 217, 269, 626, 733, 2045, 2202
AluI AGCT 7 cut(s) 133, 217, 269, 626, 733, 2045, 2202
Alw26I GTCTC 3 cut(s) 234, 906, 1581
AlwI GGATC 7 cut(s) 394, 446, 464, 1191, 1550, 1617, 2080
AlwNI CAGNNNCTG 2 cut(s) 438, 1328
Ama87I CYCGRG 2 cut(s) 209, 1026
AoxI GGCC 2 cut(s) 1810, 1949
ApeKI GCWGC 8 cut(s) 130, 194, 503, 506, 750, 815, 1865, 2165
ApoI RAATTY 3 cut(s) 140, 222, 1350
Asp718I GGTACC 1 cut(s) 1874
AspLEI GCGC 2 cut(s) 1048, 1840
AspS9I GGNCC 4 cut(s) 1088, 1486, 1810, 1949
AsuHPI GGTGA 5 cut(s) 20, 338, 671, 959, 1508
AsuII TTCGAA 1 cut(s) 101
AvaI CYCGRG 2 cut(s) 209, 1026
AvaII GGWCC 2 cut(s) 1088, 1486
AxyI CCTNAGG 1 cut(s) 350
BanI GGYRCC 1 cut(s) 1874
BanII GRGCYC 1 cut(s) 1146
BbsI GAAGAC 3 cut(s) 154, 828, 1854
BbvCI CCTCAGC 1 cut(s) 627
BbvI GCAGC 8 cut(s) 142, 181, 490, 493, 762, 802, 1852, 2152
BccI CCATC 4 cut(s) 365, 740, 1475, 1694
BcgI CGANNNNNNTGC 2 cut(s) 173, 207
BciT130I CCWGG 3 cut(s) 1099, 1367, 1520
BciVI GTATCC 1 cut(s) 582
BclI TGATCA 2 cut(s) 328, 1513
BcoDI GTCTC 3 cut(s) 234, 906, 1581
BfaI CTAG 3 cut(s) 218, 338, 2087
BfmI CTRYAG 1 cut(s) 459
BfuAI ACCTGC 1 cut(s) 1901
BfuI GTATCC 1 cut(s) 582
Bme1390I CCNGG 3 cut(s) 1099, 1367, 1520
Bme18I GGWCC 2 cut(s) 1088, 1486
BmeT110I CYCGRG 2 cut(s) 209, 1026
BmgT120I GGNCC 4 cut(s) 1088, 1486, 1810, 1949
BmiI GGNNCC 4 cut(s) 1487, 1488, 1642, 1876
BmrFI CCNGG 3 cut(s) 1099, 1367, 1520
BmsI GCATC 6 cut(s) 409, 940, 971, 1513, 1672, 2099
BpiI GAAGAC 3 cut(s) 154, 828, 1854
BplI GAGNNNNNCTC 2 cut(s) 1244, 1276
BpmI CTGGAG 1 cut(s) 561
Bpu10I CCTNAGC 1 cut(s) 627
Bpu14I TTCGAA 1 cut(s) 101
BsaBI GATNNNNATC 1 cut(s) 2071
BsaJI CCNNGG 5 cut(s) 977, 1097, 1098, 1365, 1644
BsaXI ACNNNNNCTCC 4 cut(s) 13, 43, 973, 1003
Bsc4I CCNNNNNNNGG 6 cut(s) 341, 355, 1322, 1372, 1452, 1525
Bse1I ACTGG 6 cut(s) 600, 677, 1140, 1333, 1806, 1876
Bse21I CCTNAGG 1 cut(s) 350
Bse3DI GCAATG 4 cut(s) 359, 405, 1738, 2124
Bse8I GATNNNNATC 1 cut(s) 2071
BseBI CCWGG 3 cut(s) 1099, 1367, 1520
BseDI CCNNGG 5 cut(s) 977, 1097, 1098, 1365, 1644
BseJI GATNNNNATC 1 cut(s) 2071
BseLI CCNNNNNNNGG 6 cut(s) 341, 355, 1322, 1372, 1452, 1525
BseMI GCAATG 4 cut(s) 359, 405, 1738, 2124
BseMII CTCAG 4 cut(s) 245, 618, 1233, 1275
BseNI ACTGG 6 cut(s) 600, 677, 1140, 1333, 1806, 1876
BseRI GAGGAG 2 cut(s) 26, 1322
BseXI GCAGC 8 cut(s) 142, 181, 490, 493, 762, 802, 1852, 2152
Bsh1285I CGRYCG 1 cut(s) 957
BshFI GGCC 2 cut(s) 1812, 1951
BshNI GGYRCC 1 cut(s) 1874
BsiEI CGRYCG 1 cut(s) 957
BsiHKCI CYCGRG 2 cut(s) 209, 1026
BsiSI CCGG 1 cut(s) 518
BslFI GGGAC 4 cut(s) 1339, 1348, 1499, 1584
BslI CCNNNNNNNGG 6 cut(s) 341, 355, 1322, 1372, 1452, 1525
BsmAI GTCTC 3 cut(s) 234, 906, 1581
BsmBI CGTCTC 1 cut(s) 1581
BsmFI GGGAC 4 cut(s) 1339, 1348, 1499, 1584
BsmI GAATGC 2 cut(s) 913, 1447
BsnI GGCC 2 cut(s) 1812, 1951
BsoBI CYCGRG 2 cut(s) 209, 1026
Bsp119I TTCGAA 1 cut(s) 101
Bsp1286I GDGCHC 1 cut(s) 1146
Bsp19I CCATGG 1 cut(s) 977
BspANI GGCC 2 cut(s) 1812, 1951
BspCNI CTCAG 4 cut(s) 244, 619, 1232, 1274
BspHI TCATGA 1 cut(s) 495
BspLI GGNNCC 4 cut(s) 1487, 1488, 1642, 1876
BspMI ACCTGC 1 cut(s) 1901
BspPI GGATC 7 cut(s) 394, 446, 464, 1191, 1550, 1617, 2080
BspT104I TTCGAA 1 cut(s) 101
BspT107I GGYRCC 1 cut(s) 1874
BsrDI GCAATG 4 cut(s) 359, 405, 1738, 2124
BsrI ACTGG 6 cut(s) 600, 677, 1140, 1333, 1806, 1876
BssECI CCNNGG 5 cut(s) 977, 1097, 1098, 1365, 1644
BssNAI GTATAC 1 cut(s) 1290
BssT1I CCWWGG 2 cut(s) 977, 1644
Bst1107I GTATAC 1 cut(s) 1290
Bst2UI CCWGG 3 cut(s) 1099, 1367, 1520
Bst4CI ACNGT 7 cut(s) 259, 434, 570, 652, 947, 1925, 2105
Bst6I CTCTTC 2 cut(s) 657, 1731
BstAPI GCANNNNNTGC 1 cut(s) 1119
BstBI TTCGAA 1 cut(s) 101
BstC8I GCNNGC 4 cut(s) 1127, 1842, 2131, 2204
BstDEI CTNAG 7 cut(s) 231, 350, 627, 825, 1219, 1261, 2169
BstDSI CCRYGG 1 cut(s) 977
BstEII GGTNACC 2 cut(s) 344, 971
BstENI CCTNNNNNAGG 1 cut(s) 339
BstHHI GCGC 2 cut(s) 1048, 1840
BstMAI GTCTC 3 cut(s) 234, 906, 1581
BstMCI CGRYCG 1 cut(s) 957
BstMWI GCNNNNNNNGC 6 cut(s) 203, 381, 959, 1040, 1119, 2174
BstNI CCWGG 3 cut(s) 1099, 1367, 1520
BstNSI RCATGY 2 cut(s) 545, 1117
BstPI GGTNACC 2 cut(s) 344, 971
BstSCI CCNGG 3 cut(s) 1097, 1365, 1518
BstSFI CTRYAG 1 cut(s) 459
BstV1I GCAGC 8 cut(s) 142, 181, 490, 493, 762, 802, 1852, 2152
BstV2I GAAGAC 3 cut(s) 154, 828, 1854
BstX2I RGATCY 4 cut(s) 469, 1196, 1542, 2072
BstYI RGATCY 4 cut(s) 469, 1196, 1542, 2072
BstZ17I GTATAC 1 cut(s) 1290
Bsu36I CCTNAGG 1 cut(s) 350
BsuI GTATCC 1 cut(s) 582
BsuRI GGCC 2 cut(s) 1812, 1951
BtgI CCRYGG 1 cut(s) 977
BtsI GCAGTG 1 cut(s) 1490
BtsIMutI CAGTG 3 cut(s) 593, 1490, 1869
BveI ACCTGC 1 cut(s) 1901
Cac8I GCNNGC 4 cut(s) 1127, 1842, 2131, 2204
CaiI CAGNNNCTG 2 cut(s) 438, 1328
CciI TCATGA 1 cut(s) 495
CfoI GCGC 2 cut(s) 1048, 1840
Cfr13I GGNCC 4 cut(s) 1088, 1486, 1810, 1949
CseI GACGC 1 cut(s) 1994
Csp6I GTAC 3 cut(s) 648, 1875, 1928
CviQI GTAC 3 cut(s) 648, 1875, 1928
DdeI CTNAG 7 cut(s) 231, 350, 627, 825, 1219, 1261, 2169
Eam1104I CTCTTC 2 cut(s) 657, 1731
EarI CTCTTC 2 cut(s) 657, 1731
EciI GGCGGA 1 cut(s) 1988
Eco130I CCWWGG 2 cut(s) 977, 1644
Eco24I GRGCYC 1 cut(s) 1146
Eco32I GATATC 1 cut(s) 765
Eco47I GGWCC 2 cut(s) 1088, 1486
Eco57I CTGAAG 2 cut(s) 32, 1866
Eco81I CCTNAGG 1 cut(s) 350
Eco88I CYCGRG 2 cut(s) 209, 1026
Eco91I GGTNACC 2 cut(s) 344, 971
EcoNI CCTNNNNNAGG 1 cut(s) 339
EcoO109I RGGNCCY 1 cut(s) 1486
EcoO65I GGTNACC 2 cut(s) 344, 971
EcoRI GAATTC 1 cut(s) 222
EcoRII CCWGG 3 cut(s) 1097, 1365, 1518
EcoRV GATATC 1 cut(s) 765
EcoT14I CCWWGG 2 cut(s) 977, 1644
EcoT38I GRGCYC 1 cut(s) 1146
ErhI CCWWGG 2 cut(s) 977, 1644
Esp3I CGTCTC 1 cut(s) 1581
FalI AAGNNNNNCTT 2 cut(s) 1628, 1660
FaqI GGGAC 4 cut(s) 1339, 1348, 1499, 1584
FauNDI CATATG 1 cut(s) 1655
FbaI TGATCA 2 cut(s) 328, 1513
FblI GTMKAC 2 cut(s) 1076, 1289
FriOI GRGCYC 1 cut(s) 1146
FspBI CTAG 3 cut(s) 218, 338, 2087
GlaI GCGC 2 cut(s) 1047, 1839
GsuI CTGGAG 1 cut(s) 561
HaeIII GGCC 2 cut(s) 1812, 1951
HapII CCGG 1 cut(s) 518
HgaI GACGC 1 cut(s) 1994
HhaI GCGC 2 cut(s) 1048, 1840
Hin6I GCGC 2 cut(s) 1046, 1838
HinP1I GCGC 2 cut(s) 1046, 1838
HincII GTYRAC 1 cut(s) 2137
HindII GTYRAC 1 cut(s) 2137
HindIII AAGCTT 2 cut(s) 267, 731
HpaII CCGG 1 cut(s) 518
HphI GGTGA 5 cut(s) 20, 338, 671, 959, 1508
Hpy166II GTNNAC 6 cut(s) 1077, 1290, 1892, 1928, 2084, 2137
Hpy8I GTNNAC 6 cut(s) 1077, 1290, 1892, 1928, 2084, 2137
Hpy99I CGWCG 1 cut(s) 1475
HpyAV CCTTC 6 cut(s) 465, 493, 552, 736, 1402, 1998
HpyCH4III ACNGT 7 cut(s) 259, 434, 570, 652, 947, 1925, 2105
HpyCH4IV ACGT 3 cut(s) 379, 868, 1930
HpyF10VI GCNNNNNNNGC 6 cut(s) 203, 381, 959, 1040, 1119, 2174
HpyF3I CTNAG 7 cut(s) 231, 350, 627, 825, 1219, 1261, 2169
HpySE526I ACGT 3 cut(s) 379, 868, 1930
HspAI GCGC 2 cut(s) 1046, 1838
KflI GGGWCCC 1 cut(s) 1486
KpnI GGTACC 1 cut(s) 1878
Ksp22I TGATCA 2 cut(s) 328, 1513
LmnI GCTCC 2 cut(s) 1171, 2199
Lsp1109I GCAGC 8 cut(s) 142, 181, 490, 493, 762, 802, 1852, 2152
LweI GCATC 6 cut(s) 409, 940, 971, 1513, 1672, 2099
MaeI CTAG 3 cut(s) 218, 338, 2087
MaeII ACGT 3 cut(s) 379, 868, 1930
MaeIII GTNAC 6 cut(s) 344, 679, 971, 1050, 1792, 1858
MboII GAAGA 6 cut(s) 90, 154, 674, 828, 1748, 1859
MflI RGATCY 4 cut(s) 469, 1196, 1542, 2072
MhlI GDGCHC 1 cut(s) 1146
MluCI AATT 9 cut(s) 69, 78, 140, 200, 222, 844, 1019, 1350, 1965
MlyI GAGTC 4 cut(s) 16, 1211, 1253, 2161
MmeI TCCRAC 1 cut(s) 2132
MseI TTAA 9 cut(s) 63, 294, 429, 588, 672, 1193, 1457, 1829, 2031
MslI CAYNNNNRTG 2 cut(s) 948, 1521
MspI CCGG 1 cut(s) 518
MspR9I CCNGG 3 cut(s) 1099, 1367, 1520
Mva1269I GAATGC 2 cut(s) 913, 1447
MvaI CCWGG 3 cut(s) 1099, 1367, 1520
MwoI GCNNNNNNNGC 6 cut(s) 203, 381, 959, 1040, 1119, 2174
NcoI CCATGG 1 cut(s) 977
NdeI CATATG 1 cut(s) 1655
NlaIV GGNNCC 4 cut(s) 1487, 1488, 1642, 1876
NmuCI GTSAC 3 cut(s) 344, 679, 1858
NspI RCATGY 2 cut(s) 545, 1117
NspV TTCGAA 1 cut(s) 101
PaeR7I CTCGAG 1 cut(s) 209
PagI TCATGA 1 cut(s) 495
PasI CCCWGGG 1 cut(s) 1098
PctI GAATGC 2 cut(s) 913, 1447
PflMI CCANNNNNTGG 1 cut(s) 1372
Ple19I CGATCG 1 cut(s) 957
PleI GAGTC 4 cut(s) 16, 1211, 1253, 2160
PpsI GAGTC 4 cut(s) 16, 1211, 1253, 2160
PpuMI RGGWCCY 1 cut(s) 1486
Psp1406I AACGTT 1 cut(s) 379
Psp5II RGGWCCY 1 cut(s) 1486
Psp6I CCWGG 3 cut(s) 1097, 1365, 1518
PspEI GGTNACC 2 cut(s) 344, 971
PspGI CCWGG 3 cut(s) 1097, 1365, 1518
PspN4I GGNNCC 4 cut(s) 1487, 1488, 1642, 1876
PspPI GGNCC 4 cut(s) 1088, 1486, 1810, 1949
PspPPI RGGWCCY 1 cut(s) 1486
PstNI CAGNNNCTG 2 cut(s) 438, 1328
PsuI RGATCY 4 cut(s) 469, 1196, 1542, 2072
PvuI CGATCG 1 cut(s) 957
RsaI GTAC 3 cut(s) 649, 1876, 1929
RsaNI GTAC 3 cut(s) 648, 1875, 1928
RseI CAYNNNNRTG 2 cut(s) 948, 1521
SaqAI TTAA 9 cut(s) 63, 294, 429, 588, 672, 1193, 1457, 1829, 2031
Sau96I GGNCC 4 cut(s) 1088, 1486, 1810, 1949
SchI GAGTC 4 cut(s) 16, 1211, 1253, 2161
ScrFI CCNGG 3 cut(s) 1099, 1367, 1520
SduI GDGCHC 1 cut(s) 1146
SfaNI GCATC 6 cut(s) 409, 940, 971, 1513, 1672, 2099
SfcI CTRYAG 1 cut(s) 459
Sfr274I CTCGAG 1 cut(s) 209
SfuI TTCGAA 1 cut(s) 101
SinI GGWCC 2 cut(s) 1088, 1486
SlaI CTCGAG 1 cut(s) 209
SmiMI CAYNNNNRTG 2 cut(s) 948, 1521
SmlI CTYRAG 1 cut(s) 209
SmoI CTYRAG 1 cut(s) 209
Sse9I AATT 9 cut(s) 69, 78, 140, 200, 222, 844, 1019, 1350, 1965
SspMI CTAG 3 cut(s) 218, 338, 2087
StyD4I CCNGG 3 cut(s) 1097, 1365, 1518
StyI CCWWGG 2 cut(s) 977, 1644
TaaI ACNGT 7 cut(s) 259, 434, 570, 652, 947, 1925, 2105
TaiI ACGT 3 cut(s) 382, 871, 1933
TaqI TCGA 5 cut(s) 101, 210, 546, 1470, 1725
TasI AATT 9 cut(s) 69, 78, 140, 200, 222, 844, 1019, 1350, 1965
TauI GCSGC 3 cut(s) 359, 1046, 1125
Tru1I TTAA 9 cut(s) 63, 294, 429, 588, 672, 1193, 1457, 1829, 2031
Tru9I TTAA 9 cut(s) 63, 294, 429, 588, 672, 1193, 1457, 1829, 2031
TscAI CASTG 3 cut(s) 600, 1497, 1876
TseFI GTSAC 3 cut(s) 344, 679, 1858
TseI GCWGC 8 cut(s) 130, 194, 503, 506, 750, 815, 1865, 2165
Tsp45I GTSAC 3 cut(s) 344, 679, 1858
TspGWI ACGGA 1 cut(s) 1523
TspRI CASTG 3 cut(s) 600, 1497, 1876
Van91I CCANNNNNTGG 1 cut(s) 1372
VpaK11BI GGWCC 2 cut(s) 1088, 1486
XagI CCTNNNNNAGG 1 cut(s) 339
XapI RAATTY 3 cut(s) 140, 222, 1350
XceI RCATGY 2 cut(s) 545, 1117
XhoI CTCGAG 1 cut(s) 209
XmiI GTMKAC 2 cut(s) 1076, 1289
XspI CTAG 3 cut(s) 218, 338, 2087
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.