AT4G20980

mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7-methylguanosine cap of a subset of mRNAs

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0010260
Physical Location & Seq
Forward (+)
11216881 .. 11219638
2758 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G20980.2

Sequence Viewer

Length: 1776 bp
ATGGTAACCGAAGCTTTCGAATTCGTCGCCGTTCCTTTCAATTCCGATGGCTGGGGACCTCCAGACGCTTCCGACGTTTCCTCCTCCGCCTCTCCCACCAGCGTCGCCGCCGCTAATCTTCTCCCGAACGTTCCTTTCGCTTCCTTCTCCCGTTCCGATAAGCTCGGCCGTGTAGCTGATTGGACTCGCAATCTCTCTAATCCATCCGCTCGTCCTAACACCGGATCCAAATCAGATCCGTCTGCAGTTTTCGATTTCTCCGCTTTCGCAATCGACGAAGGCTTCGGTCTCGCTTCCTCCGGTGGTAATCCCGACGAAGACGCAGCTTTCCGTCTCGTCGACGGTAAACCTCCGCCGCGTCCTAAATTCGGACCTAAATGGCGTTTCAATCCTCACCACAATCGGAATCAGCTTCCTCAACGGCGAGATGAAGAAGTTGAAGCTAAGAAGCGTGATGCTGAGAAGGAACGAGCTCGTCGTGATCGTCTCTACAATAACAACCGTAACAACATCCATCACCAACGCCGTGAAGCTGCCGCTTTCAAATCATCCGTTGATATTCAGCCGGAGTGGAACATGCTTGAGCAGATCCCTTTCTCAACATTCTCGAAGCTCTCGTACACAGTTCAAGAACCAGAAGATCTTCTTCTCTGTGGTGGCCTTGAGTACTACAACCGCCTTTTCGATCGCATAACGCCGAAAAACGAACGCAGACTCGAGCGTTTCAAGAACAGGAACTTCTTCAAAGTCACTACTAGTGATGATCCTGTGATTAGGCGTTTAGCTAAGGAAGACAAAGCTACTGTTTTCGCTACTGATGCTATATTAGCTGCTCTTATGTGTGCTCCTAGATCTGTTTACTCTTGGGATATTGTTATTCAACGTGTTGGTAACAAACTGTTCTTTGACAAGAGAGATGGATCACAGCTTGATTTGTTGTCTGTGCATGAGACATCTCAAGAGCCATTGCCTGAGTCTAAAGATGATATCAATTCTGCTCATTCTCTAGGTGTGGAAGCTGCTTACATCAATCAGAACTTTTCGCAGCAGGTTTTGGTTAGAGATGGAAAGAAGGAAACTTTTGATGAAGCCAATCCATTTGCTAATGAAGGTGAAGAGATTGCTTCTGTTGCTTATAGGTATAGAAGGTGGAAGCTTGATGATAATATGCATCTTGTTGCGAGGTGTGAGTTACAGAGTGTTGCTGATCTCAACAACCAAAGGTCGTTTCTTACTTTGAATGCTCTTAACGAGTTTGATCCTAAGTACTCTGGTGTTGATTGGAGACAGAAGCTTGAAACTCAGAGAGGTGCGGTTTTAGCTACAGAATTGAAGAACAATGGAAATAAGTTGGCTAAATGGACTGCACAAGCTTTATTGGCTAATGCTGATATGATGAAGATTGGTTTTGTCTCTAGGGTTCATCCTCGTGATCATTTCAACCATGTTATATTATCTGTTTTGGGGTATAAGCCGAAGGATTTCGCTGGACAGATTAATCTCAACACTTCTAACATGTGGGGGATTGTGAAATCCATAGTTGATCTGTGTATGAAACTAAGCGAAGGGAAGTATGTTCTTGTGAAGGATCCATCGAAGCCTCAAGTGAGGATTTATGAGGTTCCACCTGATGCTTTCGAGAATGATTACGTTGAGGAACCGTTGCCTGAAGATGAACAGGTTCAGCCAACTGAGGAAAACACAGAGGGAGCAGAAGCAAGTGTAGCTGCAACTAAAGAAACCGAGGAGAAGAAAGCTGATGATGCTCAAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003743 GO:0003824 GO:0004721 GO:0004722 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005654 GO:0005737 GO:0005783 GO:0005789 GO:0005829 GO:0005852 GO:0005911 GO:0006412 GO:0006413 GO:0006464 GO:0006470 GO:0006518 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006913 GO:0007154 GO:0007165 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009506 GO:0009628 GO:0009639 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010017 GO:0010019 GO:0010035 GO:0010038 GO:0010380 GO:0010467 GO:0012505 GO:0016020 GO:0016021 GO:0016311 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0016791 GO:0019222 GO:0019538 GO:0023052 GO:0030054 GO:0030176 GO:0031224 GO:0031227 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031984 GO:0032991 GO:0034641 GO:0034645 GO:0036211 GO:0042175 GO:0042221 GO:0042578 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046686 GO:0046906 GO:0046907 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051169 GO:0051171 GO:0051172 GO:0051179 GO:0051193 GO:0051195 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055044 GO:0065007 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071704 GO:0090056 GO:0097159 GO:0098827 GO:0104004 GO:0140096 GO:1901363 GO:1901401 GO:1901402 GO:1901463 GO:1901464 GO:1901564 GO:1901566 GO:1901576 GO:1902325
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
eIF-3_zeta

Protein Analysis

591

Amino Acids

66.72

Weight (kDa)

5.54

Isoelectric Point (pI)

38.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
eIF-3_zeta PF05091 7 - 540 7.3e-194 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010260)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G20980 AT4G20980 AT4G20980 AT4G20980 AT5G44320
fragaria_vesca FvH4_3g37950 FvH4_5g27490
malus_domestica MD05G1338100.v1.1
prunus_persica Prupe.4G048700_v2.0.a1
pyrus_communis pycom10g24520
rosa_chinensis RchiOBHm_Chr5g0048541
rosa_laevigata RLG00000034531
rosa_multiflora Rmu_sc0007341.1_g000041
rosa_roxburghii Rroxscaffold_1G00033270
rosa_rugosa Rorug05G0239400
rosa_samantha Rh5AG319100 Rh5BG329500 Rh5CG355200 Rh5DG340700
rosa_wichuraiana Rw0G021230 Rw5G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1039
AccBSI CCGCTC 1 cut(s) 209
AccI GTMKAC 1 cut(s) 339
AccII CGCG 1 cut(s) 358
AclI AACGTT 1 cut(s) 129
AclWI GGATC 9 cut(s) 219, 230, 232, 583, 758, 928, 1253, 1583, 1596
AcoI YGGCCR 1 cut(s) 166
AcsI RAATTY 2 cut(s) 20, 365
AcuI CTGAAG 1 cut(s) 1689
AfaI GTAC 3 cut(s) 620, 668, 1268
AfiI CCNNNNNNNGG 3 cut(s) 51, 221, 368
AflIII ACRYGT 2 cut(s) 883, 1515
AhlI ACTAGT 1 cut(s) 755
AjuI GAANNNNNNNTTGG 2 cut(s) 1212, 1244
Alw21I GWGCWC 2 cut(s) 475, 847
Alw26I GTCTC 6 cut(s) 293, 338, 491, 944, 1279, 1417
AlwI GGATC 9 cut(s) 219, 230, 232, 583, 758, 928, 1253, 1583, 1596
Ama87I CYCGRG 1 cut(s) 716
AoxI GGCC 2 cut(s) 166, 658
ApeKI GCWGC 6 cut(s) 323, 533, 830, 1019, 1045, 1727
ApoI RAATTY 2 cut(s) 20, 365
ArsI GACNNNNNNTTYG 2 cut(s) 266, 298
AseI ATTAAT 1 cut(s) 1497
Asp700I GAANNNNTTC 4 cut(s) 642, 740, 1481, 1680
AspS9I GGNCC 2 cut(s) 56, 371
AsuHPI GGTGA 3 cut(s) 386, 509, 1124
AsuII TTCGAA 1 cut(s) 18
AvaI CYCGRG 1 cut(s) 716
AvaII GGWCC 2 cut(s) 56, 371
BamHI GGATCC 2 cut(s) 224, 1588
BanII GRGCYC 1 cut(s) 475
BarI GAAGNNNNNNTAC 2 cut(s) 602, 634
BauI CACGAG 1 cut(s) 1428
BbsI GAAGAC 2 cut(s) 324, 798
Bbv12I GWGCWC 2 cut(s) 475, 847
BbvI GCAGC 6 cut(s) 335, 520, 817, 1006, 1057, 1714
BccI CCATC 6 cut(s) 41, 211, 522, 911, 1058, 1600
BceAI ACGGC 4 cut(s) 14, 153, 437, 510
BclI TGATCA 1 cut(s) 1432
BcoDI GTCTC 6 cut(s) 293, 338, 491, 944, 1279, 1417
BcuI ACTAGT 1 cut(s) 755
BfaI CTAG 4 cut(s) 756, 849, 1007, 1416
BfmI CTRYAG 2 cut(s) 243, 1323
BfuAI ACCTGC 1 cut(s) 1039
BglII AGATCT 2 cut(s) 640, 851
BmcAI AGTACT 2 cut(s) 668, 1268
Bme18I GGWCC 2 cut(s) 56, 371
BmeT110I CYCGRG 1 cut(s) 716
BmgT120I GGNCC 2 cut(s) 56, 371
BmiI GGNNCC 5 cut(s) 57, 226, 1590, 1623, 1659
BmsI GCATC 5 cut(s) 445, 808, 1180, 1621, 1753
BpiI GAAGAC 2 cut(s) 324, 798
BpmI CTGGAG 1 cut(s) 45
Bpu10I CCTNAGC 1 cut(s) 786
Bpu14I TTCGAA 1 cut(s) 18
BpuEI CTTGAG 5 cut(s) 602, 683, 942, 1587, 1752
BsaBI GATNNNNATC 1 cut(s) 229
BsaI GGTCTC 1 cut(s) 293
BsaJI CCNNGG 1 cut(s) 1743
BsaWI WCCGGW 2 cut(s) 221, 299
BsaXI ACNNNNNCTCC 2 cut(s) 65, 95
Bsc4I CCNNNNNNNGG 3 cut(s) 51, 221, 368
Bse3DI GCAATG 1 cut(s) 965
Bse8I GATNNNNATC 1 cut(s) 229
BseDI CCNNGG 1 cut(s) 1743
BseGI GGATG 4 cut(s) 203, 510, 548, 1423
BseJI GATNNNNATC 1 cut(s) 229
BseLI CCNNNNNNNGG 3 cut(s) 51, 221, 368
BseMI GCAATG 1 cut(s) 965
BseMII CTCAG 4 cut(s) 450, 963, 1316, 1683
BseRI GAGGAG 2 cut(s) 73, 1760
BseX3I CGGCCG 1 cut(s) 166
BseXI GCAGC 6 cut(s) 335, 520, 817, 1006, 1057, 1714
BseYI CCCAGC 1 cut(s) 51
BsgI GTGCAG 1 cut(s) 1350
Bsh1236I CGCG 1 cut(s) 358
Bsh1285I CGRYCG 2 cut(s) 169, 688
BshFI GGCC 2 cut(s) 168, 660
BsiEI CGRYCG 2 cut(s) 169, 688
BsiHKAI GWGCWC 2 cut(s) 475, 847
BsiHKCI CYCGRG 1 cut(s) 716
BsiSI CCGG 3 cut(s) 222, 300, 566
BslFI GGGAC 1 cut(s) 69
BslI CCNNNNNNNGG 3 cut(s) 51, 221, 368
BsmAI GTCTC 6 cut(s) 293, 338, 491, 944, 1279, 1417
BsmBI CGTCTC 2 cut(s) 338, 491
BsmFI GGGAC 1 cut(s) 69
BsmI GAATGC 1 cut(s) 1246
BsnI GGCC 2 cut(s) 168, 660
Bso31I GGTCTC 1 cut(s) 293
BsoBI CYCGRG 1 cut(s) 716
Bsp119I TTCGAA 1 cut(s) 18
Bsp1286I GDGCHC 2 cut(s) 475, 847
BspANI GGCC 2 cut(s) 168, 660
BspCNI CTCAG 4 cut(s) 451, 964, 1315, 1684
BspFNI CGCG 1 cut(s) 358
BspLI GGNNCC 5 cut(s) 57, 226, 1590, 1623, 1659
BspMAI CTGCAG 1 cut(s) 247
BspMI ACCTGC 1 cut(s) 1039
BspPI GGATC 9 cut(s) 219, 230, 232, 583, 758, 928, 1253, 1583, 1596
BspT104I TTCGAA 1 cut(s) 18
BspTNI GGTCTC 1 cut(s) 293
BsrBI CCGCTC 1 cut(s) 209
BsrDI GCAATG 1 cut(s) 965
BssECI CCNNGG 1 cut(s) 1743
BssSI CACGAG 1 cut(s) 1428
Bst2BI CACGAG 1 cut(s) 1428
Bst4CI ACNGT 6 cut(s) 344, 503, 625, 805, 900, 1662
Bst6I CTCTTC 1 cut(s) 1110
BstBI TTCGAA 1 cut(s) 18
BstDEI CTNAG 8 cut(s) 444, 459, 786, 972, 1263, 1302, 1559, 1692
BstEII GGTNACC 1 cut(s) 4
BstF5I GGATG 4 cut(s) 203, 510, 548, 1423
BstFNI CGCG 1 cut(s) 358
BstMAI GTCTC 6 cut(s) 293, 338, 491, 944, 1279, 1417
BstMCI CGRYCG 2 cut(s) 169, 688
BstMWI GCNNNNNNNGC 7 cut(s) 818, 827, 1130, 1319, 1379, 1724, 1763
BstNSI RCATGY 2 cut(s) 580, 1519
BstPI GGTNACC 1 cut(s) 4
BstSFI CTRYAG 2 cut(s) 243, 1323
BstUI CGCG 1 cut(s) 358
BstV1I GCAGC 6 cut(s) 335, 520, 817, 1006, 1057, 1714
BstV2I GAAGAC 2 cut(s) 324, 798
BstX2I RGATCY 6 cut(s) 224, 235, 588, 640, 851, 1588
BstYI RGATCY 6 cut(s) 224, 235, 588, 640, 851, 1588
BstZI CGGCCG 1 cut(s) 166
BsuRI GGCC 2 cut(s) 168, 660
BtsCI GGATG 4 cut(s) 203, 510, 548, 1423
BveI ACCTGC 1 cut(s) 1039
Cfr13I GGNCC 2 cut(s) 56, 371
CseI GACGC 4 cut(s) 74, 91, 329, 347
Csp6I GTAC 3 cut(s) 619, 667, 1267
CviAII CATG 4 cut(s) 577, 947, 1445, 1516
CviQI GTAC 3 cut(s) 619, 667, 1267
DdeI CTNAG 8 cut(s) 444, 459, 786, 972, 1263, 1302, 1559, 1692
EaeI YGGCCR 1 cut(s) 166
EagI CGGCCG 1 cut(s) 166
Eam1104I CTCTTC 1 cut(s) 1110
EarI CTCTTC 1 cut(s) 1110
EciI GGCGGA 2 cut(s) 76, 342
Ecl136II GAGCTC 1 cut(s) 473
EclXI CGGCCG 1 cut(s) 166
Eco24I GRGCYC 1 cut(s) 475
Eco31I GGTCTC 1 cut(s) 293
Eco32I GATATC 1 cut(s) 988
Eco47I GGWCC 2 cut(s) 56, 371
Eco52I CGGCCG 1 cut(s) 166
Eco53kI GAGCTC 1 cut(s) 473
Eco57I CTGAAG 1 cut(s) 1689
Eco88I CYCGRG 1 cut(s) 716
Eco91I GGTNACC 1 cut(s) 4
EcoICRI GAGCTC 1 cut(s) 473
EcoO109I RGGNCCY 1 cut(s) 56
EcoO65I GGTNACC 1 cut(s) 4
EcoRI GAATTC 1 cut(s) 20
EcoRV GATATC 1 cut(s) 988
EcoT22I ATGCAT 1 cut(s) 1173
EcoT38I GRGCYC 1 cut(s) 475
Esp3I CGTCTC 2 cut(s) 338, 491
FaeI CATG 4 cut(s) 580, 950, 1448, 1519
FalI AAGNNNNNCTT 2 cut(s) 630, 662
FaqI GGGAC 1 cut(s) 69
FatI CATG 4 cut(s) 576, 946, 1444, 1515
FbaI TGATCA 1 cut(s) 1432
FblI GTMKAC 1 cut(s) 339
FokI GGATG 4 cut(s) 190, 497, 535, 1410
FriOI GRGCYC 1 cut(s) 475
FspBI CTAG 4 cut(s) 756, 849, 1007, 1416
GsaI CCCAGC 1 cut(s) 55
GsuI CTGGAG 1 cut(s) 45
HaeIII GGCC 2 cut(s) 168, 660
HapII CCGG 3 cut(s) 222, 300, 566
HgaI GACGC 4 cut(s) 74, 91, 329, 347
Hin1II CATG 4 cut(s) 580, 950, 1448, 1519
HincII GTYRAC 1 cut(s) 340
HindII GTYRAC 1 cut(s) 340
HindIII AAGCTT 5 cut(s) 12, 1154, 1292, 1371, 1770
HinfI GANTC 4 cut(s) 184, 406, 714, 974
HpaII CCGG 3 cut(s) 222, 300, 566
HphI GGTGA 3 cut(s) 386, 509, 1124
Hpy166II GTNNAC 4 cut(s) 340, 347, 621, 859
Hpy188I TCNGA 8 cut(s) 46, 73, 157, 235, 371, 405, 1035, 1305
Hpy8I GTNNAC 4 cut(s) 340, 347, 621, 859
Hpy99I CGWCG 8 cut(s) 29, 77, 107, 278, 317, 341, 344, 480
HpyAV CCTTC 9 cut(s) 154, 272, 457, 1066, 1103, 1140, 1471, 1559, 1579
HpyCH4III ACNGT 6 cut(s) 344, 503, 625, 805, 900, 1662
HpyCH4IV ACGT 4 cut(s) 75, 129, 883, 1650
HpyCH4V TGCA 5 cut(s) 245, 946, 1171, 1367, 1730
HpyF10VI GCNNNNNNNGC 7 cut(s) 818, 827, 1130, 1319, 1379, 1724, 1763
HpyF3I CTNAG 8 cut(s) 444, 459, 786, 972, 1263, 1302, 1559, 1692
HpySE526I ACGT 4 cut(s) 75, 129, 883, 1650
Hsp92II CATG 4 cut(s) 580, 950, 1448, 1519
Ksp22I TGATCA 1 cut(s) 1432
LmnI GCTCC 2 cut(s) 850, 1709
Lsp1109I GCAGC 6 cut(s) 335, 520, 817, 1006, 1057, 1714
LweI GCATC 5 cut(s) 445, 808, 1180, 1621, 1753
MaeI CTAG 4 cut(s) 756, 849, 1007, 1416
MaeII ACGT 4 cut(s) 75, 129, 883, 1650
MaeIII GTNAC 5 cut(s) 4, 503, 748, 890, 1191
MbiI CCGCTC 1 cut(s) 209
MflI RGATCY 6 cut(s) 224, 235, 588, 640, 851, 1588
MhlI GDGCHC 2 cut(s) 475, 847
MluCI AATT 5 cut(s) 20, 40, 365, 991, 1328
MlyI GAGTC 3 cut(s) 178, 708, 983
MmeI TCCRAC 1 cut(s) 96
Mph1103I ATGCAT 1 cut(s) 1173
MroXI GAANNNNTTC 4 cut(s) 642, 740, 1481, 1680
MseI TTAA 2 cut(s) 1248, 1497
MslI CAYNNNNRTG 1 cut(s) 1428
MspI CCGG 3 cut(s) 222, 300, 566
Mva1269I GAATGC 1 cut(s) 1246
MvnI CGCG 1 cut(s) 358
MwoI GCNNNNNNNGC 7 cut(s) 818, 827, 1130, 1319, 1379, 1724, 1763
NlaIII CATG 4 cut(s) 580, 950, 1448, 1519
NlaIV GGNNCC 5 cut(s) 57, 226, 1590, 1623, 1659
NmeAIII GCCGAG 1 cut(s) 144
NmuCI GTSAC 1 cut(s) 748
NsiI ATGCAT 1 cut(s) 1173
NspI RCATGY 2 cut(s) 580, 1519
NspV TTCGAA 1 cut(s) 18
PaeR7I CTCGAG 1 cut(s) 716
PciI ACATGT 1 cut(s) 1515
PcsI WCGNNNNNNNCGW 5 cut(s) 72, 273, 475, 481, 614
PctI GAATGC 1 cut(s) 1246
PdmI GAANNNNTTC 4 cut(s) 642, 740, 1481, 1680
PfeI GAWTC 1 cut(s) 406
Ple19I CGATCG 1 cut(s) 688
PleI GAGTC 3 cut(s) 178, 708, 982
PpsI GAGTC 3 cut(s) 178, 708, 982
PpuMI RGGWCCY 1 cut(s) 56
PscI ACATGT 1 cut(s) 1515
PshBI ATTAAT 1 cut(s) 1497
Psp124BI GAGCTC 1 cut(s) 475
Psp1406I AACGTT 1 cut(s) 129
Psp5II RGGWCCY 1 cut(s) 56
PspEI GGTNACC 1 cut(s) 4
PspFI CCCAGC 1 cut(s) 51
PspN4I GGNNCC 5 cut(s) 57, 226, 1590, 1623, 1659
PspPI GGNCC 2 cut(s) 56, 371
PspPPI RGGWCCY 1 cut(s) 56
PspXI VCTCGAGB 1 cut(s) 716
PstI CTGCAG 1 cut(s) 247
PsuI RGATCY 6 cut(s) 224, 235, 588, 640, 851, 1588
PvuI CGATCG 1 cut(s) 688
RsaI GTAC 3 cut(s) 620, 668, 1268
RsaNI GTAC 3 cut(s) 619, 667, 1267
RseI CAYNNNNRTG 1 cut(s) 1428
SacI GAGCTC 1 cut(s) 475
SalI GTCGAC 1 cut(s) 338
SaqAI TTAA 2 cut(s) 1248, 1497
Sau96I GGNCC 2 cut(s) 56, 371
ScaI AGTACT 2 cut(s) 668, 1268
SchI GAGTC 3 cut(s) 178, 708, 983
SduI GDGCHC 2 cut(s) 475, 847
SfaNI GCATC 5 cut(s) 445, 808, 1180, 1621, 1753
SfcI CTRYAG 2 cut(s) 243, 1323
Sfr274I CTCGAG 1 cut(s) 716
SfuI TTCGAA 1 cut(s) 18
SgrDI CGTCGACG 1 cut(s) 338
SinI GGWCC 2 cut(s) 56, 371
SlaI CTCGAG 1 cut(s) 716
SmiMI CAYNNNNRTG 1 cut(s) 1428
SmlI CTYRAG 6 cut(s) 581, 662, 716, 957, 1602, 1767
SmoI CTYRAG 6 cut(s) 581, 662, 716, 957, 1602, 1767
SpeI ACTAGT 1 cut(s) 755
Sse9I AATT 5 cut(s) 20, 40, 365, 991, 1328
SspMI CTAG 4 cut(s) 756, 849, 1007, 1416
SstI GAGCTC 1 cut(s) 475
TaaI ACNGT 6 cut(s) 344, 503, 625, 805, 900, 1662
TaiI ACGT 4 cut(s) 78, 132, 886, 1653
TaqI TCGA 9 cut(s) 18, 252, 273, 339, 608, 684, 717, 1595, 1638
TaqII GACCGA 1 cut(s) 275
TasI AATT 5 cut(s) 20, 40, 365, 991, 1328
TatI WGTACW 2 cut(s) 666, 1266
TauI GCSGC 4 cut(s) 110, 113, 358, 539
TfiI GAWTC 1 cut(s) 406
Tru1I TTAA 2 cut(s) 1248, 1497
Tru9I TTAA 2 cut(s) 1248, 1497
TseFI GTSAC 1 cut(s) 748
TseI GCWGC 6 cut(s) 323, 533, 830, 1019, 1045, 1727
Tsp45I GTSAC 1 cut(s) 748
TspDTI ATGAA 7 cut(s) 444, 1101, 1122, 1412, 1412, 1568, 1689
TspGWI ACGGA 3 cut(s) 228, 320, 541
VpaK11BI GGWCC 2 cut(s) 56, 371
VspI ATTAAT 1 cut(s) 1497
XapI RAATTY 2 cut(s) 20, 365
XceI RCATGY 2 cut(s) 580, 1519
XhoI CTCGAG 1 cut(s) 716
XmiI GTMKAC 1 cut(s) 339
XmnI GAANNNNTTC 4 cut(s) 642, 740, 1481, 1680
XspI CTAG 4 cut(s) 756, 849, 1007, 1416
ZrmI AGTACT 2 cut(s) 668, 1268
Zsp2I ATGCAT 1 cut(s) 1173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.