FvH4_5g27490

mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7-methylguanosine cap of a subset of mRNAs

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0010260
Physical Location & Seq
Forward (+)
18732191 .. 18737186
4996 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g27490.t1

Sequence Viewer

Length: 1698 bp
ATGGTCGAAGCCTTCGAAGTCAGCGGCGTCCCCTTCAACCCCGACGGCTGGGGCCCACCGGACTGCGCCATCACGACAACCAGCACCTCCAACCTCCCCCTCAACGTCCCCTTCGCCCCCTTCTCCCGCTCCGAGAAGCTCGGCCGCATCGCCGACTGGACCCGCACCTTCAACAACCCCTCCCGCTCCAAAAACCCCTCCGACGCCGTCTTCGACTTCTCCAACGACGACTCCTTCCTCGGCAACGCCGACGACGACTCCACCTTCCGCCTCGTCGACGGCAAACCCCCGCCGCGTCCCAAATTCGGCCCCAAGTGGAGGTTCCAGCAGCAGCGCCAGCTCCCTCACCGCCGCGACGAGGAGGTCGAGGCCAAGAAGCGCGAGGCTGAGAAGGAGAGGGCTCGCCGAGACCGCCAATACAACATGAACCGATCCAATGTCAACATGCCTCGCCGTGAAGCCGCCGTCTTCAAATCCTCTGTGGATATCCAGCCGGAGTGGAACATGCTGGATCAGATCCTCTTCTCCACATTCTCCAAGCTCTCCTTCACCGTCCCTGAGCCTGAGGATCTTCTCTTCTGCGGCGCCCTCGAGACCTATGACCGCACCGTCGATCGAATCACTCCCAAGAACGAGCGCAGGCTCGAGCGCTTCAAGAACCGCAACTTCTTCAGGGTCACAACCAGTGATGATCCGGTCATCCGTCGCCTGGCCAAGGAGGACAAGGCTACTGTCTTCACTACCGATACTATCCTCTCCACCCTCATGTGTGCGCCCAGGTCTGTTTACTCTTGGGACATTGTGGTTACGCGTGTCGGAAACAAGTTGTTCTTTGACAAACGTGATGGCTCTCAGCTTGATTTCCTTACGGTCCATGAGACCTCTCAGGAGCCCTTGCCCGAATCCAAGGACGATATCAACTCCGCTCATTTATTGGGTCTCGAGGCTGCTTACATTAACCAGAATTTCTCTCAGCAGGTTCTTGTTAGAGATGGGAACAAGGTCACCTTCGACGAGCCTAATCCGTTTGCAAATGAAGGGGAGGAAGTTGCCTCTGTTGCTTATCGGTACAGAAGGTGGAAGCTTGACAGTGAGGTGTCTCTGGTCGCAAGGTGTGAGGTTCAGAGTGTTATGGAGGTCAACAACCAGAGGTCGTTTTTGACTCTGAATGCGCTCAATGAATTTGATCCTAAATATTCTGGTGTTGATTGGAGGCAGAAATTGGAGACTCAGAGGGGTGCTGTCTTGGCCAATGAGCTTAAGAACAATGCCAACAAGTTGGCTAAATGGACTGCACAAGCTCTATTGGCTGGTGCTGATATGATGAAGTTGGGTTATGTTTCAAGGGTTCATCCTCGTGATCACTTCAACCATGTTATTTTGGCTGTGAATGGATACAAGCCCAAGGAGTTTTCCTCACAGATTAATCTGAACCAGGCCAGTATGTGGGGAATTGTGAAGGCTATTGTGGACTTGTGTATGAAACTGAAGGAGGGTAAGTATGTACTGGTAAAGGATCCATCTAAGCCACAAGTTAGAATATATGAGGTGCCAACAGATGCTTTTGAAAATGACTATGTGGAAGAACCACTACCGGAGGACGAGCAAGCTCAACCCCCTATTGAAGATGGCACGGGTGCAGAGCCAAATGTTGCTGCTACTGATGTGGAGGATAGCAAGGTTGAAGCTCAAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003743 GO:0003824 GO:0004721 GO:0004722 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005654 GO:0005737 GO:0005783 GO:0005789 GO:0005829 GO:0005852 GO:0005911 GO:0006412 GO:0006413 GO:0006464 GO:0006470 GO:0006518 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006913 GO:0007154 GO:0007165 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009506 GO:0009628 GO:0009639 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010017 GO:0010019 GO:0010035 GO:0010038 GO:0010380 GO:0010467 GO:0012505 GO:0016020 GO:0016021 GO:0016311 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0016791 GO:0019222 GO:0019538 GO:0023052 GO:0030054 GO:0030176 GO:0031224 GO:0031227 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031984 GO:0032991 GO:0034641 GO:0034645 GO:0036211 GO:0042175 GO:0042221 GO:0042578 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046686 GO:0046906 GO:0046907 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051169 GO:0051171 GO:0051172 GO:0051179 GO:0051193 GO:0051195 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055044 GO:0065007 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071704 GO:0090056 GO:0097159 GO:0098827 GO:0104004 GO:0140096 GO:1901363 GO:1901401 GO:1901402 GO:1901463 GO:1901464 GO:1901564 GO:1901566 GO:1901576 GO:1902325
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
eIF-3_zeta

Protein Analysis

566

Amino Acids

64.42

Weight (kDa)

5.39

Isoelectric Point (pI)

39.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
eIF-3_zeta PF05091 6 - 516 4.5e-196 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
NARG2_C PF10505 354 - 518 6.4e-06 NMDA receptor-regulated gene protein 2 C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010260)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G20980 AT4G20980 AT4G20980 AT4G20980 AT5G44320
fragaria_vesca FvH4_3g37950 FvH4_5g27490
malus_domestica MD05G1338100.v1.1
prunus_persica Prupe.4G048700_v2.0.a1
pyrus_communis pycom10g24520
rosa_chinensis RchiOBHm_Chr5g0048541
rosa_laevigata RLG00000034531
rosa_multiflora Rmu_sc0007341.1_g000041
rosa_roxburghii Rroxscaffold_1G00033270
rosa_rugosa Rorug05G0239400
rosa_samantha Rh5AG319100 Rh5BG329500 Rh5CG355200 Rh5DG340700
rosa_wichuraiana Rw0G021230 Rw5G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 362, 608
Acc36I ACCTGC 1 cut(s) 967
AccB1I GGYRCC 2 cut(s) 584, 1549
AccB7I CCANNNNNTGG 1 cut(s) 1446
AccBSI CCGCTC 3 cut(s) 129, 186, 926
AccI GTMKAC 1 cut(s) 276
AccII CGCG 4 cut(s) 295, 354, 381, 811
AclWI GGATC 8 cut(s) 426, 511, 519, 576, 686, 1181, 1511, 1524
AcoI YGGCCR 3 cut(s) 142, 711, 1248
AcsI RAATTY 3 cut(s) 302, 964, 1181
AcuI CTGAAG 2 cut(s) 655, 1508
AcyI GRCGYC 3 cut(s) 27, 204, 585
AfaI GTAC 2 cut(s) 1070, 1506
AfeI AGCGCT 1 cut(s) 650
AfiI CCNNNNNNNGG 7 cut(s) 48, 305, 318, 358, 709, 715, 1446
AflII CTTAAG 1 cut(s) 1259
AflIII ACRYGT 1 cut(s) 809
AgsI TTSAA 9 cut(s) 37, 172, 472, 655, 1344, 1369, 1568, 1625, 1685
AjnI CCWGG 3 cut(s) 708, 776, 1434
AjuI GAANNNNNNNTTGG 4 cut(s) 305, 337, 530, 562
Alw26I GTCTC 6 cut(s) 402, 587, 872, 944, 1104, 1220
AlwI GGATC 8 cut(s) 426, 511, 519, 576, 686, 1181, 1511, 1524
Ama87I CYCGRG 3 cut(s) 590, 644, 941
Aor51HI AGCGCT 1 cut(s) 650
AoxI GGCC 7 cut(s) 52, 142, 307, 369, 711, 1248, 1437
ApaI GGGCCC 1 cut(s) 56
ApeKI GCWGC 4 cut(s) 328, 331, 947, 1655
ApoI RAATTY 3 cut(s) 302, 964, 1181
ArsI GACNNNNNNTTYG 2 cut(s) 194, 226
AseI ATTAAT 1 cut(s) 1425
AspLEI GCGC 8 cut(s) 68, 336, 381, 587, 639, 651, 775, 1174
AspS9I GGNCC 5 cut(s) 52, 53, 159, 308, 871
AsuHPI GGTGA 3 cut(s) 338, 541, 997
AsuII TTCGAA 1 cut(s) 15
AvaI CYCGRG 3 cut(s) 590, 644, 941
AvaII GGWCC 2 cut(s) 159, 871
AxyI CCTNAGG 1 cut(s) 564
BaeGI GKGCMC 1 cut(s) 56
BalI TGGCCA 2 cut(s) 713, 1250
BamHI GGATCC 1 cut(s) 1516
BanI GGYRCC 2 cut(s) 584, 1549
BanII GRGCYC 3 cut(s) 56, 403, 894
BarI GAAGNNNNNNTAC 2 cut(s) 1575, 1607
BauI CACGAG 1 cut(s) 1356
BbsI GAAGAC 3 cut(s) 202, 460, 727
BbvI GCAGC 4 cut(s) 340, 343, 934, 1642
BccI CCATC 5 cut(s) 77, 839, 986, 1528, 1622
BceAI ACGGC 5 cut(s) 61, 191, 295, 438, 449
BciT130I CCWGG 3 cut(s) 710, 778, 1436
BciVI GTATCC 1 cut(s) 1388
BclI TGATCA 1 cut(s) 1360
BcoDI GTCTC 6 cut(s) 402, 587, 872, 944, 1104, 1220
BfoI RGCGCY 3 cut(s) 337, 588, 652
BfrI CTTAAG 1 cut(s) 1259
BfuAI ACCTGC 1 cut(s) 967
BfuI GTATCC 1 cut(s) 1388
Bme1390I CCNGG 3 cut(s) 710, 778, 1436
Bme18I GGWCC 2 cut(s) 159, 871
BmeT110I CYCGRG 3 cut(s) 590, 644, 941
BmgT120I GGNCC 5 cut(s) 52, 53, 159, 308, 871
BmiI GGNNCC 9 cut(s) 53, 54, 161, 310, 323, 586, 891, 1518, 1551
BmrFI CCNGG 3 cut(s) 710, 778, 1436
BmsI GCATC 2 cut(s) 156, 1549
BpiI GAAGAC 3 cut(s) 202, 460, 727
BplI GAGNNNNNCTC 2 cut(s) 1400, 1432
Bpu10I CCTNAGC 1 cut(s) 558
Bpu14I TTCGAA 1 cut(s) 15
BpuEI CTTGAG 1 cut(s) 1674
BsaHI GRCGYC 3 cut(s) 27, 204, 585
BsaI GGTCTC 4 cut(s) 402, 587, 872, 944
BsaJI CCNNGG 5 cut(s) 238, 714, 776, 906, 1404
BsaWI WCCGGW 3 cut(s) 58, 694, 1594
BsaXI ACNNNNNCTCC 8 cut(s) 164, 194, 215, 242, 245, 272, 1484, 1514
Bsc4I CCNNNNNNNGG 7 cut(s) 48, 305, 318, 358, 709, 715, 1446
Bse1I ACTGG 4 cut(s) 161, 684, 1440, 1512
Bse21I CCTNAGG 1 cut(s) 564
BseBI CCWGG 3 cut(s) 710, 778, 1436
BseDI CCNNGG 5 cut(s) 238, 714, 776, 906, 1404
BseGI GGATG 2 cut(s) 699, 1351
BseLI CCNNNNNNNGG 7 cut(s) 48, 305, 318, 358, 709, 715, 1446
BseMII CTCAG 7 cut(s) 378, 549, 555, 866, 899, 986, 1244
BseNI ACTGG 4 cut(s) 161, 684, 1440, 1512
BseRI GAGGAG 1 cut(s) 374
BseSI GKGCMC 1 cut(s) 56
BseX3I CGGCCG 1 cut(s) 142
BseXI GCAGC 4 cut(s) 340, 343, 934, 1642
BseYI CCCAGC 1 cut(s) 48
BsgI GTGCAG 2 cut(s) 1278, 1659
Bsh1236I CGCG 4 cut(s) 295, 354, 381, 811
Bsh1285I CGRYCG 2 cut(s) 145, 616
BshFI GGCC 7 cut(s) 54, 144, 309, 371, 713, 1250, 1439
BshNI GGYRCC 2 cut(s) 584, 1549
BsiEI CGRYCG 2 cut(s) 145, 616
BsiHKCI CYCGRG 3 cut(s) 590, 644, 941
BsiSI CCGG 4 cut(s) 59, 494, 695, 1595
BslFI GGGAC 5 cut(s) 14, 92, 282, 539, 809
BslI CCNNNNNNNGG 7 cut(s) 48, 305, 318, 358, 709, 715, 1446
BsmAI GTCTC 6 cut(s) 402, 587, 872, 944, 1104, 1220
BsmFI GGGAC 5 cut(s) 14, 92, 282, 539, 809
BsmI GAATGC 1 cut(s) 1174
BsnI GGCC 7 cut(s) 54, 144, 309, 371, 713, 1250, 1439
Bso31I GGTCTC 4 cut(s) 402, 587, 872, 944
BsoBI CYCGRG 3 cut(s) 590, 644, 941
Bsp119I TTCGAA 1 cut(s) 15
Bsp120I GGGCCC 1 cut(s) 52
Bsp1286I GDGCHC 3 cut(s) 56, 403, 894
Bsp143I GATC 9 cut(s) 431, 511, 516, 568, 613, 691, 1186, 1360, 1516
BspANI GGCC 7 cut(s) 54, 144, 309, 371, 713, 1250, 1439
BspCNI CTCAG 7 cut(s) 379, 550, 556, 865, 898, 985, 1243
BspFNI CGCG 4 cut(s) 295, 354, 381, 811
BspLI GGNNCC 9 cut(s) 53, 54, 161, 310, 323, 586, 891, 1518, 1551
BspMI ACCTGC 1 cut(s) 967
BspPI GGATC 8 cut(s) 426, 511, 519, 576, 686, 1181, 1511, 1524
BspT104I TTCGAA 1 cut(s) 15
BspT107I GGYRCC 2 cut(s) 584, 1549
BspTI CTTAAG 1 cut(s) 1259
BspTNI GGTCTC 4 cut(s) 402, 587, 872, 944
BsrBI CCGCTC 3 cut(s) 129, 186, 926
BsrI ACTGG 4 cut(s) 161, 684, 1440, 1512
BssECI CCNNGG 5 cut(s) 238, 714, 776, 906, 1404
BssMI GATC 9 cut(s) 431, 511, 516, 568, 613, 691, 1186, 1360, 1516
BssNI GRCGYC 3 cut(s) 27, 204, 585
BssSI CACGAG 1 cut(s) 1356
BssT1I CCWWGG 3 cut(s) 714, 906, 1404
Bst2BI CACGAG 1 cut(s) 1356
Bst2UI CCWGG 3 cut(s) 710, 778, 1436
Bst4CI ACNGT 5 cut(s) 553, 610, 733, 871, 1091
Bst6I CTCTTC 2 cut(s) 527, 581
BstACI GRCGYC 3 cut(s) 27, 204, 585
BstAFI CTTAAG 1 cut(s) 1259
BstBI TTCGAA 1 cut(s) 15
BstC8I GCNNGC 4 cut(s) 338, 403, 641, 1608
BstDEI CTNAG 8 cut(s) 387, 558, 564, 852, 885, 972, 1230, 1524
BstEII GGTNACC 1 cut(s) 1003
BstENI CCTNNNNNAGG 1 cut(s) 713
BstF5I GGATG 2 cut(s) 699, 1351
BstFNI CGCG 4 cut(s) 295, 354, 381, 811
BstH2I RGCGCY 3 cut(s) 337, 588, 652
BstHHI GCGC 8 cut(s) 68, 336, 381, 587, 639, 651, 775, 1174
BstKTI GATC 9 cut(s) 434, 514, 519, 571, 616, 694, 1189, 1363, 1519
BstMAI GTCTC 6 cut(s) 402, 587, 872, 944, 1104, 1220
BstMBI GATC 9 cut(s) 431, 511, 516, 568, 613, 691, 1186, 1360, 1516
BstMCI CGRYCG 2 cut(s) 145, 616
BstMWI GCNNNNNNNGC 5 cut(s) 337, 411, 1058, 1247, 1307
BstNI CCWGG 3 cut(s) 710, 778, 1436
BstNSI RCATGY 2 cut(s) 448, 508
BstPI GGTNACC 1 cut(s) 1003
BstSCI CCNGG 3 cut(s) 708, 776, 1434
BstSLI GKGCMC 1 cut(s) 56
BstUI CGCG 4 cut(s) 295, 354, 381, 811
BstV1I GCAGC 4 cut(s) 340, 343, 934, 1642
BstV2I GAAGAC 3 cut(s) 202, 460, 727
BstX2I RGATCY 3 cut(s) 516, 568, 1516
BstXI CCANNNNNNTGG 1 cut(s) 1279
BstYI RGATCY 3 cut(s) 516, 568, 1516
BstZI CGGCCG 1 cut(s) 142
Bsu36I CCTNAGG 1 cut(s) 564
BsuI GTATCC 1 cut(s) 1388
BsuRI GGCC 7 cut(s) 54, 144, 309, 371, 713, 1250, 1439
BtgZI GCGATG 1 cut(s) 133
BtsCI GGATG 2 cut(s) 699, 1351
BtsIMutI CAGTG 2 cut(s) 691, 1096
BveI ACCTGC 1 cut(s) 967
Cac8I GCNNGC 4 cut(s) 338, 403, 641, 1608
CfoI GCGC 8 cut(s) 68, 336, 381, 587, 639, 651, 775, 1174
Cfr13I GGNCC 5 cut(s) 52, 53, 159, 308, 871
CseI GACGC 3 cut(s) 16, 212, 284
Csp6I GTAC 2 cut(s) 1069, 1505
CviAII CATG 6 cut(s) 424, 445, 505, 766, 875, 1373
CviQI GTAC 2 cut(s) 1069, 1505
DdeI CTNAG 8 cut(s) 387, 558, 564, 852, 885, 972, 1230, 1524
DinI GGCGCC 1 cut(s) 586
DpnI GATC 9 cut(s) 433, 513, 518, 570, 615, 693, 1188, 1362, 1518
DpnII GATC 9 cut(s) 431, 511, 516, 568, 613, 691, 1186, 1360, 1516
DrdI GACNNNNNNGTC 2 cut(s) 362, 608
DseDI GACNNNNNNGTC 2 cut(s) 362, 608
EaeI YGGCCR 3 cut(s) 142, 711, 1248
EagI CGGCCG 1 cut(s) 142
Eam1104I CTCTTC 2 cut(s) 527, 581
EarI CTCTTC 2 cut(s) 527, 581
EciI GGCGGA 1 cut(s) 257
EclXI CGGCCG 1 cut(s) 142
Eco130I CCWWGG 3 cut(s) 714, 906, 1404
Eco24I GRGCYC 3 cut(s) 56, 403, 894
Eco31I GGTCTC 4 cut(s) 402, 587, 872, 944
Eco32I GATATC 2 cut(s) 487, 916
Eco47I GGWCC 2 cut(s) 159, 871
Eco47III AGCGCT 1 cut(s) 650
Eco52I CGGCCG 1 cut(s) 142
Eco57I CTGAAG 2 cut(s) 655, 1508
Eco81I CCTNAGG 1 cut(s) 564
Eco88I CYCGRG 3 cut(s) 590, 644, 941
Eco91I GGTNACC 1 cut(s) 1003
EcoNI CCTNNNNNAGG 1 cut(s) 713
EcoO109I RGGNCCY 1 cut(s) 52
EcoO65I GGTNACC 1 cut(s) 1003
EcoRII CCWGG 3 cut(s) 708, 776, 1434
EcoRV GATATC 2 cut(s) 487, 916
EcoT14I CCWWGG 3 cut(s) 714, 906, 1404
EcoT38I GRGCYC 3 cut(s) 56, 403, 894
EgeI GGCGCC 1 cut(s) 586
EheI GGCGCC 1 cut(s) 586
ErhI CCWWGG 3 cut(s) 714, 906, 1404
FaeI CATG 6 cut(s) 427, 448, 508, 769, 878, 1376
FalI AAGNNNNNCTT 6 cut(s) 530, 562, 815, 847, 992, 1024
FaqI GGGAC 5 cut(s) 14, 92, 282, 539, 809
FatI CATG 6 cut(s) 423, 444, 504, 765, 874, 1372
FauI CCCGC 4 cut(s) 134, 170, 191, 297
FbaI TGATCA 1 cut(s) 1360
FblI GTMKAC 1 cut(s) 276
FokI GGATG 2 cut(s) 686, 1338
FriOI GRGCYC 3 cut(s) 56, 403, 894
GlaI GCGC 8 cut(s) 67, 335, 380, 586, 638, 650, 774, 1173
GsaI CCCAGC 1 cut(s) 52
HaeII RGCGCY 3 cut(s) 337, 588, 652
HaeIII GGCC 7 cut(s) 54, 144, 309, 371, 713, 1250, 1439
HapII CCGG 4 cut(s) 59, 494, 695, 1595
HgaI GACGC 3 cut(s) 16, 212, 284
HhaI GCGC 8 cut(s) 68, 336, 381, 587, 639, 651, 775, 1174
Hin1I GRCGYC 3 cut(s) 27, 204, 585
Hin1II CATG 6 cut(s) 427, 448, 508, 769, 878, 1376
Hin6I GCGC 8 cut(s) 66, 334, 379, 585, 637, 649, 773, 1172
HinP1I GCGC 8 cut(s) 66, 334, 379, 585, 637, 649, 773, 1172
HincII GTYRAC 3 cut(s) 277, 442, 1141
HindII GTYRAC 3 cut(s) 277, 442, 1141
HindIII AAGCTT 2 cut(s) 1082, 1692
HinfI GANTC 6 cut(s) 230, 257, 618, 902, 1162, 1228
HpaII CCGG 4 cut(s) 59, 494, 695, 1595
HphI GGTGA 3 cut(s) 338, 541, 997
Hpy166II GTNNAC 5 cut(s) 277, 442, 787, 1141, 1471
Hpy188I TCNGA 8 cut(s) 133, 202, 516, 818, 1125, 1167, 1233, 1431
Hpy188III TCNNGA 6 cut(s) 73, 592, 655, 887, 941, 1358
Hpy8I GTNNAC 5 cut(s) 277, 442, 787, 1141, 1471
HpyCH4III ACNGT 5 cut(s) 553, 610, 733, 871, 1091
HpyCH4IV ACGT 2 cut(s) 105, 841
HpyCH4V TGCA 3 cut(s) 1031, 1295, 1640
HpyF10VI GCNNNNNNNGC 5 cut(s) 337, 411, 1058, 1247, 1307
HpyF3I CTNAG 8 cut(s) 387, 558, 564, 852, 885, 972, 1230, 1524
HpySE526I ACGT 2 cut(s) 105, 841
Hsp92I GRCGYC 3 cut(s) 27, 204, 585
Hsp92II CATG 6 cut(s) 427, 448, 508, 769, 878, 1376
HspAI GCGC 8 cut(s) 66, 334, 379, 585, 637, 649, 773, 1172
KasI GGCGCC 1 cut(s) 584
Ksp22I TGATCA 1 cut(s) 1360
Kzo9I GATC 9 cut(s) 431, 511, 516, 568, 613, 691, 1186, 1360, 1516
LmnI GCTCC 4 cut(s) 134, 191, 345, 889
Lsp1109I GCAGC 4 cut(s) 340, 343, 934, 1642
LweI GCATC 2 cut(s) 156, 1549
MaeII ACGT 2 cut(s) 105, 841
MaeIII GTNAC 3 cut(s) 676, 805, 1003
MalI GATC 9 cut(s) 433, 513, 518, 570, 615, 693, 1188, 1362, 1518
MbiI CCGCTC 3 cut(s) 129, 186, 926
MboI GATC 9 cut(s) 431, 511, 516, 568, 613, 691, 1186, 1360, 1516
MboII GAAGA 9 cut(s) 202, 460, 514, 563, 568, 661, 727, 1595, 1637
MflI RGATCY 3 cut(s) 516, 568, 1516
MhlI GDGCHC 3 cut(s) 56, 403, 894
MlsI TGGCCA 2 cut(s) 713, 1250
MluCI AATT 5 cut(s) 302, 964, 1181, 1220, 1452
MluI ACGCGT 1 cut(s) 809
MluNI TGGCCA 2 cut(s) 713, 1250
Mly113I GGCGCC 1 cut(s) 585
MlyI GAGTC 4 cut(s) 224, 251, 1156, 1222
MmeI TCCRAC 4 cut(s) 114, 225, 246, 796
Mox20I TGGCCA 2 cut(s) 713, 1250
MscI TGGCCA 2 cut(s) 713, 1250
MseI TTAA 4 cut(s) 957, 1260, 1425, 1696
MslI CAYNNNNRTG 2 cut(s) 764, 1356
Msp20I TGGCCA 2 cut(s) 713, 1250
MspA1I CMGCKG 1 cut(s) 24
MspCI CTTAAG 1 cut(s) 1259
MspI CCGG 4 cut(s) 59, 494, 695, 1595
MspR9I CCNGG 3 cut(s) 710, 778, 1436
Mva1269I GAATGC 1 cut(s) 1174
MvaI CCWGG 3 cut(s) 710, 778, 1436
MvnI CGCG 4 cut(s) 295, 354, 381, 811
MwoI GCNNNNNNNGC 5 cut(s) 337, 411, 1058, 1247, 1307
NarI GGCGCC 1 cut(s) 585
NdeII GATC 9 cut(s) 431, 511, 516, 568, 613, 691, 1186, 1360, 1516
NlaIII CATG 6 cut(s) 427, 448, 508, 769, 878, 1376
NlaIV GGNNCC 9 cut(s) 53, 54, 161, 310, 323, 586, 891, 1518, 1551
NmeAIII GCCGAG 3 cut(s) 120, 219, 431
NmuCI GTSAC 2 cut(s) 676, 1003
NspI RCATGY 2 cut(s) 448, 508
NspV TTCGAA 1 cut(s) 15
PaeR7I CTCGAG 3 cut(s) 590, 644, 941
PcsI WCGNNNNNNNCGW 5 cut(s) 12, 210, 246, 252, 363
PctI GAATGC 1 cut(s) 1174
PfeI GAWTC 2 cut(s) 618, 902
PflFI GACNNNGTC 1 cut(s) 206
PflMI CCANNNNNTGG 1 cut(s) 1446
Ple19I CGATCG 1 cut(s) 616
PleI GAGTC 4 cut(s) 224, 251, 1156, 1222
PluTI GGCGCC 1 cut(s) 588
PpsI GAGTC 4 cut(s) 224, 251, 1156, 1222
PshBI ATTAAT 1 cut(s) 1425
Psp6I CCWGG 3 cut(s) 708, 776, 1434
PspEI GGTNACC 1 cut(s) 1003
PspFI CCCAGC 1 cut(s) 48
PspGI CCWGG 3 cut(s) 708, 776, 1434
PspN4I GGNNCC 9 cut(s) 53, 54, 161, 310, 323, 586, 891, 1518, 1551
PspOMI GGGCCC 1 cut(s) 52
PspPI GGNCC 5 cut(s) 52, 53, 159, 308, 871
PspXI VCTCGAGB 1 cut(s) 644
PsuI RGATCY 3 cut(s) 516, 568, 1516
PsyI GACNNNGTC 1 cut(s) 206
PvuI CGATCG 1 cut(s) 616
RsaI GTAC 2 cut(s) 1070, 1506
RsaNI GTAC 2 cut(s) 1069, 1505
RseI CAYNNNNRTG 2 cut(s) 764, 1356
SalI GTCGAC 1 cut(s) 275
SaqAI TTAA 4 cut(s) 957, 1260, 1425, 1696
Sau3AI GATC 9 cut(s) 431, 511, 516, 568, 613, 691, 1186, 1360, 1516
Sau96I GGNCC 5 cut(s) 52, 53, 159, 308, 871
SchI GAGTC 4 cut(s) 224, 251, 1156, 1222
ScrFI CCNGG 3 cut(s) 710, 778, 1436
SduI GDGCHC 3 cut(s) 56, 403, 894
SfaNI GCATC 2 cut(s) 156, 1549
SfoI GGCGCC 1 cut(s) 586
Sfr274I CTCGAG 3 cut(s) 590, 644, 941
SfuI TTCGAA 1 cut(s) 15
SgrDI CGTCGACG 1 cut(s) 275
SinI GGWCC 2 cut(s) 159, 871
SlaI CTCGAG 3 cut(s) 590, 644, 941
SmiMI CAYNNNNRTG 2 cut(s) 764, 1356
SmlI CTYRAG 5 cut(s) 590, 644, 941, 1259, 1689
SmoI CTYRAG 5 cut(s) 590, 644, 941, 1259, 1689
Sse9I AATT 5 cut(s) 302, 964, 1181, 1220, 1452
SspDI GGCGCC 1 cut(s) 584
SspI AATATT 1 cut(s) 1196
StyD4I CCNGG 3 cut(s) 708, 776, 1434
StyI CCWWGG 3 cut(s) 714, 906, 1404
TaaI ACNGT 5 cut(s) 553, 610, 733, 871, 1091
TaiI ACGT 2 cut(s) 108, 844
TasI AATT 5 cut(s) 302, 964, 1181, 1220, 1452
TatI WGTACW 1 cut(s) 1504
TauI GCSGC 6 cut(s) 27, 147, 295, 354, 464, 585
TfiI GAWTC 2 cut(s) 618, 902
Tru1I TTAA 4 cut(s) 957, 1260, 1425, 1696
Tru9I TTAA 4 cut(s) 957, 1260, 1425, 1696
TscAI CASTG 2 cut(s) 691, 1096
TseFI GTSAC 2 cut(s) 676, 1003
TseI GCWGC 4 cut(s) 328, 331, 947, 1655
Tsp45I GTSAC 2 cut(s) 676, 1003
TspDTI ATGAA 6 cut(s) 440, 1050, 1194, 1340, 1340, 1496
TspGWI ACGGA 2 cut(s) 692, 1014
TspRI CASTG 2 cut(s) 691, 1096
Tth111I GACNNNGTC 1 cut(s) 206
Van91I CCANNNNNTGG 1 cut(s) 1446
Vha464I CTTAAG 1 cut(s) 1259
VpaK11BI GGWCC 2 cut(s) 159, 871
VspI ATTAAT 1 cut(s) 1425
XagI CCTNNNNNAGG 1 cut(s) 713
XapI RAATTY 3 cut(s) 302, 964, 1181
XceI RCATGY 2 cut(s) 448, 508
XhoI CTCGAG 3 cut(s) 590, 644, 941
XmiI GTMKAC 1 cut(s) 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.