Rroxscaffold_1G00033270

mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7-methylguanosine cap of a subset of mRNAs

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0010260
Physical Location & Seq
Reverse (-)
48004705 .. 48006402
1698 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00033270.1

Sequence Viewer

Length: 1311 bp
ATGGTCGAAGGCTTCGAAGTCGGCGGCGTCCCCTTCAACCCCGACGGCTGGGGCCCACCGGATTCCGCCATCACCACAACCACCACCTCCAACCTCCCCCTCAACGTCCCCTTCGCTCCCTTCTCCCGCTCCGAGAAGCTGGGCCGGATCGCCGACTGGACCCGCACCTTCAACAACCCGGCCCGGTCCAAAAACCCCTCCGACGCCGTCTTCGACTTCTCCAACGACGAGTCGTTCCCCGGTAACGCCGATGACGACTCCACCTTCCGCCTCGTCGACGGAAAACCGCCGCCGCGTCCGAAATTCGGCCCCAAGTGGAGGTTCCAGCAGCAGAGGCAGCTCCCTCACCGCCGCGACGAGGAGGTCGAGGCCAAGAAGCGCGAGGCTGAGAAGGAGAGGGCTCGCCGTGACCGGCTTTACAACATGAACAGATCCAATGTCAACATGCCCCGCCGTGAAGCCGCCGTGTTCAAATCGTCGGTGGATATCCAGCCGGAATGGAACATGCTGGATCAGATCCCGTTCTCGACCTTCTCCAAGCTCTCTTTCACTGTCCCTGAGCCGGAGGATCTCCTCTTCTGCGGCGCACTCGAGACCTATGACCGAACCGTTGATCGAATCACGCCGAAGAATGAGCGCAGGCTGGAGCGGTTCAAGAACCGCAACTTCTTCAAGGTCACAACCACTGATGATCCAGTCATTCGCCGACTTGCAAATGAAGACAAGGCTACTGTTTTTGCCACTGATACGATCCTCTCGACCCTCATGTGTGCGCCAAGGTCAGTTTACTCTTGGGACATTGTGGTTCAGCGAGTTGGAAACAAGTTGTTCTTTGACAAGCGTGATGGCTCTCAGCTCGACTTGCTTTCGGTCCACGAGACCTCTCAGGAGCCCCTGCCCGAAGCCAAGGACGATATCAATTCAGCTTATTCCCTGAGTGTTGAGGCTGCTTACATTAACCAGAATTTCTCTCAGCAGGTTTTGGTTAGAGATGGGAATAAGGTCACTTTCGAGGAGCCCAACCCATTTGCAAATGAAGGGGAGGAAGTTGCCTCTGTTGCTTATCGGTACAGAAGGTGGAAGCTGGACAGTGAGGTGTCTCTGGTTGCAAGGTGTGAGGTTCAGAGTGTTATGGAGGTTAACAACCAGAGAATATATGAGGTTCCACCAGATGCTTTTGAAAATGACTATGTGGAGGAACCACTACCAGAGGACGAGCAAGTTCAGCCCCCTACTGAGGATGGCCAAGGTGCAGAGCCAAATATTGCTGCAACTGATGTGGAGGATAAAGAGGTTGAAGCTCAAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003743 GO:0003824 GO:0004721 GO:0004722 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005654 GO:0005737 GO:0005783 GO:0005789 GO:0005829 GO:0005852 GO:0005911 GO:0006412 GO:0006413 GO:0006464 GO:0006470 GO:0006518 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006913 GO:0007154 GO:0007165 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009506 GO:0009628 GO:0009639 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010017 GO:0010019 GO:0010035 GO:0010038 GO:0010380 GO:0010467 GO:0012505 GO:0016020 GO:0016021 GO:0016311 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0016791 GO:0019222 GO:0019538 GO:0023052 GO:0030054 GO:0030176 GO:0031224 GO:0031227 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031984 GO:0032991 GO:0034641 GO:0034645 GO:0036211 GO:0042175 GO:0042221 GO:0042578 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046686 GO:0046906 GO:0046907 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051169 GO:0051171 GO:0051172 GO:0051179 GO:0051193 GO:0051195 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055044 GO:0065007 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071704 GO:0090056 GO:0097159 GO:0098827 GO:0104004 GO:0140096 GO:1901363 GO:1901401 GO:1901402 GO:1901463 GO:1901464 GO:1901564 GO:1901566 GO:1901576 GO:1902325
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
eIF-3_zeta

Protein Analysis

436

Amino Acids

49.81

Weight (kDa)

4.76

Isoelectric Point (pI)

49.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
eIF-3_zeta PF05091 7 - 383 1.5e-120 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010260)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G20980 AT4G20980 AT4G20980 AT4G20980 AT5G44320
fragaria_vesca FvH4_3g37950 FvH4_5g27490
malus_domestica MD05G1338100.v1.1
prunus_persica Prupe.4G048700_v2.0.a1
pyrus_communis pycom10g24520
rosa_chinensis RchiOBHm_Chr5g0048541
rosa_laevigata RLG00000034531
rosa_multiflora Rmu_sc0007341.1_g000041
rosa_roxburghii Rroxscaffold_1G00033270
rosa_rugosa Rorug05G0239400
rosa_samantha Rh5AG319100 Rh5BG329500 Rh5CG355200 Rh5DG340700
rosa_wichuraiana Rw0G021230 Rw5G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 362
Acc36I ACCTGC 1 cut(s) 967
AccBSI CCGCTC 2 cut(s) 129, 649
AccI GTMKAC 1 cut(s) 276
AccII CGCG 3 cut(s) 295, 354, 381
AclWI GGATC 7 cut(s) 155, 426, 511, 519, 576, 686, 745
AcoI YGGCCR 1 cut(s) 1243
AcsI RAATTY 2 cut(s) 302, 964
AcyI GRCGYC 2 cut(s) 27, 204
AfaI GTAC 1 cut(s) 1070
AfiI CCNNNNNNNGG 6 cut(s) 48, 305, 318, 358, 562, 1237
AgsI TTSAA 7 cut(s) 37, 172, 472, 655, 673, 1181, 1298
AjuI GAANNNNNNNTTGG 4 cut(s) 305, 337, 530, 562
AluBI AGCT 8 cut(s) 139, 340, 541, 856, 926, 1084, 1301, 1307
AluI AGCT 8 cut(s) 139, 340, 541, 856, 926, 1084, 1301, 1307
Alw26I GTCTC 3 cut(s) 587, 872, 1104
AlwI GGATC 7 cut(s) 155, 426, 511, 519, 576, 686, 745
Ama87I CYCGRG 1 cut(s) 590
AoxI GGCC 6 cut(s) 52, 142, 180, 307, 369, 1243
ApaI GGGCCC 1 cut(s) 56
ApeKI GCWGC 4 cut(s) 328, 337, 947, 1268
ApoI RAATTY 2 cut(s) 302, 964
ArsI GACNNNNNNTTYG 2 cut(s) 194, 226
AspLEI GCGC 4 cut(s) 381, 587, 639, 775
AspS9I GGNCC 8 cut(s) 52, 53, 142, 159, 181, 186, 308, 871
AsuC2I CCSGG 3 cut(s) 179, 184, 240
AsuHPI GGTGA 2 cut(s) 64, 338
AsuII TTCGAA 1 cut(s) 15
AvaI CYCGRG 1 cut(s) 590
AvaII GGWCC 3 cut(s) 159, 186, 871
BaeGI GKGCMC 1 cut(s) 56
BalI TGGCCA 1 cut(s) 1245
BanII GRGCYC 4 cut(s) 56, 403, 894, 1020
BauI CACGAG 1 cut(s) 875
BbsI GAAGAC 2 cut(s) 202, 726
BbvI GCAGC 4 cut(s) 340, 349, 934, 1255
BccI CCATC 4 cut(s) 77, 839, 986, 1235
BceAI ACGGC 5 cut(s) 61, 191, 390, 438, 449
BcnI CCSGG 3 cut(s) 179, 184, 240
BcoDI GTCTC 3 cut(s) 587, 872, 1104
BfuAI ACCTGC 1 cut(s) 967
Bme1390I CCNGG 3 cut(s) 179, 184, 240
Bme18I GGWCC 3 cut(s) 159, 186, 871
BmeT110I CYCGRG 1 cut(s) 590
BmgT120I GGNCC 8 cut(s) 52, 53, 142, 159, 181, 186, 308, 871
BmiI GGNNCC 9 cut(s) 53, 54, 161, 310, 323, 891, 1017, 1164, 1200
BmrFI CCNGG 3 cut(s) 179, 184, 240
BmsI GCATC 1 cut(s) 1162
BpiI GAAGAC 2 cut(s) 202, 726
BpmI CTGGAG 1 cut(s) 665
Bpu10I CCTNAGC 1 cut(s) 558
Bpu14I TTCGAA 1 cut(s) 15
BpuEI CTTGAG 1 cut(s) 1287
BpuMI CCSGG 3 cut(s) 179, 184, 240
BsaHI GRCGYC 2 cut(s) 27, 204
BsaI GGTCTC 2 cut(s) 587, 872
BsaJI CCNNGG 4 cut(s) 238, 776, 906, 1246
BsaWI WCCGGW 1 cut(s) 58
Bsc4I CCNNNNNNNGG 6 cut(s) 48, 305, 318, 358, 562, 1237
Bse118I RCCGGY 1 cut(s) 411
Bse1I ACTGG 2 cut(s) 161, 695
BseDI CCNNGG 4 cut(s) 238, 776, 906, 1246
BseGI GGATG 1 cut(s) 1246
BseLI CCNNNNNNNGG 6 cut(s) 48, 305, 318, 358, 562, 1237
BseMII CTCAG 7 cut(s) 378, 549, 866, 899, 926, 986, 1227
BseNI ACTGG 2 cut(s) 161, 695
BseRI GAGGAG 3 cut(s) 374, 563, 1028
BseSI GKGCMC 1 cut(s) 56
BseXI GCAGC 4 cut(s) 340, 349, 934, 1255
BseYI CCCAGC 2 cut(s) 48, 139
BsgI GTGCAG 1 cut(s) 1272
Bsh1236I CGCG 3 cut(s) 295, 354, 381
BshFI GGCC 6 cut(s) 54, 144, 182, 309, 371, 1245
BsiHKCI CYCGRG 1 cut(s) 590
BsiSI CCGG 8 cut(s) 59, 145, 179, 184, 240, 412, 494, 563
BslFI GGGAC 4 cut(s) 14, 92, 539, 809
BslI CCNNNNNNNGG 6 cut(s) 48, 305, 318, 358, 562, 1237
BsmAI GTCTC 3 cut(s) 587, 872, 1104
BsmFI GGGAC 4 cut(s) 14, 92, 539, 809
BsnI GGCC 6 cut(s) 54, 144, 182, 309, 371, 1245
Bso31I GGTCTC 2 cut(s) 587, 872
BsoBI CYCGRG 1 cut(s) 590
Bsp119I TTCGAA 1 cut(s) 15
Bsp120I GGGCCC 1 cut(s) 52
Bsp1286I GDGCHC 4 cut(s) 56, 403, 894, 1020
Bsp143I GATC 8 cut(s) 147, 431, 511, 516, 568, 613, 691, 750
BspANI GGCC 6 cut(s) 54, 144, 182, 309, 371, 1245
BspCNI CTCAG 7 cut(s) 379, 550, 865, 898, 927, 985, 1228
BspFNI CGCG 3 cut(s) 295, 354, 381
BspLI GGNNCC 9 cut(s) 53, 54, 161, 310, 323, 891, 1017, 1164, 1200
BspMI ACCTGC 1 cut(s) 967
BspPI GGATC 7 cut(s) 155, 426, 511, 519, 576, 686, 745
BspT104I TTCGAA 1 cut(s) 15
BspTNI GGTCTC 2 cut(s) 587, 872
BsrBI CCGCTC 2 cut(s) 129, 649
BsrFI RCCGGY 1 cut(s) 411
BsrI ACTGG 2 cut(s) 161, 695
BssAI RCCGGY 1 cut(s) 411
BssECI CCNNGG 4 cut(s) 238, 776, 906, 1246
BssMI GATC 8 cut(s) 147, 431, 511, 516, 568, 613, 691, 750
BssNI GRCGYC 2 cut(s) 27, 204
BssSI CACGAG 1 cut(s) 875
BssT1I CCWWGG 3 cut(s) 776, 906, 1246
Bst2BI CACGAG 1 cut(s) 875
Bst4CI ACNGT 4 cut(s) 553, 610, 733, 1091
Bst6I CTCTTC 1 cut(s) 581
BstACI GRCGYC 2 cut(s) 27, 204
BstBI TTCGAA 1 cut(s) 15
BstC8I GCNNGC 2 cut(s) 403, 641
BstDEI CTNAG 7 cut(s) 387, 558, 852, 885, 935, 972, 1236
BstF5I GGATG 1 cut(s) 1246
BstFNI CGCG 3 cut(s) 295, 354, 381
BstHHI GCGC 4 cut(s) 381, 587, 639, 775
BstKTI GATC 8 cut(s) 150, 434, 514, 519, 571, 616, 694, 753
BstMAI GTCTC 3 cut(s) 587, 872, 1104
BstMBI GATC 8 cut(s) 147, 431, 511, 516, 568, 613, 691, 750
BstMWI GCNNNNNNNGC 5 cut(s) 334, 337, 862, 1058, 1225
BstNSI RCATGY 2 cut(s) 448, 508
BstSCI CCNGG 3 cut(s) 177, 182, 238
BstSLI GKGCMC 1 cut(s) 56
BstUI CGCG 3 cut(s) 295, 354, 381
BstV1I GCAGC 4 cut(s) 340, 349, 934, 1255
BstV2I GAAGAC 2 cut(s) 202, 726
BstX2I RGATCY 3 cut(s) 431, 516, 568
BstYI RGATCY 3 cut(s) 431, 516, 568
BsuRI GGCC 6 cut(s) 54, 144, 182, 309, 371, 1245
BtsCI GGATG 1 cut(s) 1246
BtsIMutI CAGTG 4 cut(s) 549, 684, 741, 1096
BveI ACCTGC 1 cut(s) 967
Cac8I GCNNGC 2 cut(s) 403, 641
CfoI GCGC 4 cut(s) 381, 587, 639, 775
Cfr10I RCCGGY 1 cut(s) 411
Cfr13I GGNCC 8 cut(s) 52, 53, 142, 159, 181, 186, 308, 871
CseI GACGC 3 cut(s) 16, 212, 284
Csp6I GTAC 1 cut(s) 1069
CspCI CAANNNNNGTGG 2 cut(s) 1260, 1295
CviAII CATG 4 cut(s) 424, 445, 505, 766
CviQI GTAC 1 cut(s) 1069
DdeI CTNAG 7 cut(s) 387, 558, 852, 885, 935, 972, 1236
DpnI GATC 8 cut(s) 149, 433, 513, 518, 570, 615, 693, 752
DpnII GATC 8 cut(s) 147, 431, 511, 516, 568, 613, 691, 750
DrdI GACNNNNNNGTC 1 cut(s) 362
DseDI GACNNNNNNGTC 1 cut(s) 362
EaeI YGGCCR 1 cut(s) 1243
Eam1104I CTCTTC 1 cut(s) 581
EarI CTCTTC 1 cut(s) 581
EciI GGCGGA 2 cut(s) 55, 257
Eco130I CCWWGG 3 cut(s) 776, 906, 1246
Eco24I GRGCYC 4 cut(s) 56, 403, 894, 1020
Eco31I GGTCTC 2 cut(s) 587, 872
Eco32I GATATC 2 cut(s) 487, 916
Eco47I GGWCC 3 cut(s) 159, 186, 871
Eco88I CYCGRG 1 cut(s) 590
EcoO109I RGGNCCY 1 cut(s) 52
EcoRV GATATC 2 cut(s) 487, 916
EcoT14I CCWWGG 3 cut(s) 776, 906, 1246
EcoT38I GRGCYC 4 cut(s) 56, 403, 894, 1020
ErhI CCWWGG 3 cut(s) 776, 906, 1246
FaeI CATG 4 cut(s) 427, 448, 508, 769
FaiI YATR 9 cut(s) 425, 446, 506, 600, 767, 1133, 1156, 1158, 1191
FalI AAGNNNNNCTT 2 cut(s) 815, 847
FaqI GGGAC 4 cut(s) 14, 92, 539, 809
FatI CATG 4 cut(s) 423, 444, 504, 765
FauI CCCGC 3 cut(s) 134, 170, 458
FblI GTMKAC 1 cut(s) 276
FokI GGATG 1 cut(s) 1253
FriOI GRGCYC 4 cut(s) 56, 403, 894, 1020
GlaI GCGC 4 cut(s) 380, 586, 638, 774
GsaI CCCAGC 2 cut(s) 52, 143
GsuI CTGGAG 1 cut(s) 665
HaeIII GGCC 6 cut(s) 54, 144, 182, 309, 371, 1245
HapII CCGG 8 cut(s) 59, 145, 179, 184, 240, 412, 494, 563
HgaI GACGC 3 cut(s) 16, 212, 284
HhaI GCGC 4 cut(s) 381, 587, 639, 775
Hin1I GRCGYC 2 cut(s) 27, 204
Hin1II CATG 4 cut(s) 427, 448, 508, 769
Hin6I GCGC 4 cut(s) 379, 585, 637, 773
HinP1I GCGC 4 cut(s) 379, 585, 637, 773
HincII GTYRAC 3 cut(s) 277, 442, 1141
HindII GTYRAC 3 cut(s) 277, 442, 1141
HindIII AAGCTT 1 cut(s) 1305
HinfI GANTC 4 cut(s) 62, 230, 257, 618
HpaI GTTAAC 1 cut(s) 1141
HpaII CCGG 8 cut(s) 59, 145, 179, 184, 240, 412, 494, 563
HphI GGTGA 2 cut(s) 64, 338
Hpy166II GTNNAC 5 cut(s) 277, 442, 787, 874, 1141
Hpy188I TCNGA 5 cut(s) 133, 202, 300, 516, 1125
Hpy188III TCNNGA 5 cut(s) 526, 592, 655, 757, 887
Hpy8I GTNNAC 5 cut(s) 277, 442, 787, 874, 1141
Hpy99I CGWCG 7 cut(s) 47, 206, 230, 278, 281, 359, 481
HpyAV CCTTC 9 cut(s) 43, 121, 130, 178, 274, 385, 541, 1031, 1068
HpyCH4III ACNGT 4 cut(s) 553, 610, 733, 1091
HpyCH4IV ACGT 1 cut(s) 105
HpyCH4V TGCA 5 cut(s) 713, 1031, 1109, 1253, 1271
HpyF10VI GCNNNNNNNGC 5 cut(s) 334, 337, 862, 1058, 1225
HpyF3I CTNAG 7 cut(s) 387, 558, 852, 885, 935, 972, 1236
HpySE526I ACGT 1 cut(s) 105
Hsp92I GRCGYC 2 cut(s) 27, 204
Hsp92II CATG 4 cut(s) 427, 448, 508, 769
HspAI GCGC 4 cut(s) 379, 585, 637, 773
KspAI GTTAAC 1 cut(s) 1141
Kzo9I GATC 8 cut(s) 147, 431, 511, 516, 568, 613, 691, 750
LmnI GCTCC 6 cut(s) 121, 134, 345, 646, 889, 1015
Lsp1109I GCAGC 4 cut(s) 340, 349, 934, 1255
LweI GCATC 1 cut(s) 1162
MaeII ACGT 1 cut(s) 105
MaeIII GTNAC 4 cut(s) 242, 407, 676, 1003
MalI GATC 8 cut(s) 149, 433, 513, 518, 570, 615, 693, 752
MbiI CCGCTC 2 cut(s) 129, 649
MboI GATC 8 cut(s) 147, 431, 511, 516, 568, 613, 691, 750
MboII GAAGA 5 cut(s) 202, 568, 640, 661, 731
MflI RGATCY 3 cut(s) 431, 516, 568
MhlI GDGCHC 4 cut(s) 56, 403, 894, 1020
MlsI TGGCCA 1 cut(s) 1245
MluCI AATT 3 cut(s) 302, 919, 964
MluNI TGGCCA 1 cut(s) 1245
MlyI GAGTC 2 cut(s) 239, 251
MmeI TCCRAC 4 cut(s) 114, 225, 246, 796
Mox20I TGGCCA 1 cut(s) 1245
MscI TGGCCA 1 cut(s) 1245
MseI TTAA 3 cut(s) 957, 1140, 1309
Msp20I TGGCCA 1 cut(s) 1245
MspI CCGG 8 cut(s) 59, 145, 179, 184, 240, 412, 494, 563
MspR9I CCNGG 3 cut(s) 179, 184, 240
MvnI CGCG 3 cut(s) 295, 354, 381
MwoI GCNNNNNNNGC 5 cut(s) 334, 337, 862, 1058, 1225
NciI CCSGG 3 cut(s) 179, 184, 240
NdeII GATC 8 cut(s) 147, 431, 511, 516, 568, 613, 691, 750
NlaIII CATG 4 cut(s) 427, 448, 508, 769
NlaIV GGNNCC 9 cut(s) 53, 54, 161, 310, 323, 891, 1017, 1164, 1200
NmuCI GTSAC 3 cut(s) 407, 676, 1003
NspI RCATGY 2 cut(s) 448, 508
NspV TTCGAA 1 cut(s) 15
PaeR7I CTCGAG 1 cut(s) 590
PcsI WCGNNNNNNNCGW 5 cut(s) 12, 210, 252, 363, 755
PfeI GAWTC 2 cut(s) 62, 618
PflFI GACNNNGTC 1 cut(s) 206
PleI GAGTC 2 cut(s) 238, 251
PpsI GAGTC 2 cut(s) 238, 251
PspFI CCCAGC 2 cut(s) 48, 139
PspN4I GGNNCC 9 cut(s) 53, 54, 161, 310, 323, 891, 1017, 1164, 1200
PspOMI GGGCCC 1 cut(s) 52
PspPI GGNCC 8 cut(s) 52, 53, 142, 159, 181, 186, 308, 871
PsuI RGATCY 3 cut(s) 431, 516, 568
PsyI GACNNNGTC 1 cut(s) 206
RsaI GTAC 1 cut(s) 1070
RsaNI GTAC 1 cut(s) 1069
SalI GTCGAC 1 cut(s) 275
SaqAI TTAA 3 cut(s) 957, 1140, 1309
Sau3AI GATC 8 cut(s) 147, 431, 511, 516, 568, 613, 691, 750
Sau96I GGNCC 8 cut(s) 52, 53, 142, 159, 181, 186, 308, 871
SchI GAGTC 2 cut(s) 239, 251
ScrFI CCNGG 3 cut(s) 179, 184, 240
SduI GDGCHC 4 cut(s) 56, 403, 894, 1020
SfaNI GCATC 1 cut(s) 1162
Sfr274I CTCGAG 1 cut(s) 590
SfuI TTCGAA 1 cut(s) 15
SgrDI CGTCGACG 1 cut(s) 275
SinI GGWCC 3 cut(s) 159, 186, 871
SlaI CTCGAG 1 cut(s) 590
SmlI CTYRAG 2 cut(s) 590, 1302
SmoI CTYRAG 2 cut(s) 590, 1302
Sse9I AATT 3 cut(s) 302, 919, 964
SspI AATATT 1 cut(s) 1264
StyD4I CCNGG 3 cut(s) 177, 182, 238
StyI CCWWGG 3 cut(s) 776, 906, 1246
TaaI ACNGT 4 cut(s) 553, 610, 733, 1091
TaiI ACGT 1 cut(s) 108
TaqII GACCGA 2 cut(s) 618, 859
TasI AATT 3 cut(s) 302, 919, 964
TauI GCSGC 6 cut(s) 27, 292, 295, 354, 464, 585
TfiI GAWTC 2 cut(s) 62, 618
Tru1I TTAA 3 cut(s) 957, 1140, 1309
Tru9I TTAA 3 cut(s) 957, 1140, 1309
TscAI CASTG 4 cut(s) 556, 691, 748, 1096
TseFI GTSAC 3 cut(s) 407, 676, 1003
TseI GCWGC 4 cut(s) 328, 337, 947, 1268
Tsp45I GTSAC 3 cut(s) 407, 676, 1003
TspDTI ATGAA 3 cut(s) 440, 732, 1050
TspGWI ACGGA 1 cut(s) 294
TspRI CASTG 4 cut(s) 556, 691, 748, 1096
Tth111I GACNNNGTC 1 cut(s) 206
VpaK11BI GGWCC 3 cut(s) 159, 186, 871
XapI RAATTY 2 cut(s) 302, 964
XceI RCATGY 2 cut(s) 448, 508
XhoI CTCGAG 1 cut(s) 590
XmiI GTMKAC 1 cut(s) 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.