RLG00000034531

mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7-methylguanosine cap of a subset of mRNAs

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0010260
Physical Location & Seq
Forward (+)
44428826 .. 44431341
2516 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034531

Sequence Viewer

Length: 1626 bp
ATGGTCGAAGGATTCGAAGTCGGCGGCGTCCCCTTCAACCCCGACGGCTGGGGCCCACCGGATTCCGCCACGACCACAACCACCACCTCCAACCTCCCCCTCAACGTCCCCTTCGCCCCCTTCTCCCGCTCCGAGAAGCTTGGCCGGATCGCCGACTGGACCCGCACCTTCAACAACCCGGCCCGGTCCAAAAACCCATCCGACGCCGTCTTCGACTTCTCCAACGACGAGTCGTTCCCCGGTAACGCCGATGACGACTCCACCTTCCGCCTCGTCGACGGAAAACCGCCGCCGCGTCCTAAATTCGGCCCCAAGTGGAGGTTCCAGCAGCAGAGGCAGCTCCCTCATCGCCGCGACGAGGAGGTCGAGGCCAAGAAGCGCGAGGCTGAGAAGGAGAGGGCTCGCCGTGACCGGCTTTACAACATGAACAGATCCAATGTCAACATGCCTCGCCGTGAAGCCGCCGTGTTCAAATCGTCGGTGGATATCCAGCCGGAATGGAACATGCTGGATCAGATCCCGTTCTCGACCTTCTCCAAGCTCTCTTTCACTGTCCCTGAGCCGGAGGATCTGCTCTTCTGCGGCGCACTCGAGACCTATGACCGAACCGTTGATCGAATCACGCCGAAGAATGAGCGCAGGCTGGAGCGGTTCAAGAACCGCAACTTCTTCAAGGTCACAACCACTGATGATCCAGTCATTCGCCGACTTGCAAATGAAGACAAGGCTACTGTTTTCGCCACCGATACGATCCTCTCGACCCTAATGTGTGCGCCGAGGTCAGTTTACTCTTGGGACATTGTGGTTCAGCGAGTTGGAAACAAGTTGTTCTTTGACAAGCGTGATGGCTCTCAGCTCGACTTGCTCTCGGTCCATGAGACCTCTCAGGAGCCCCTGCCCGAAGCCAAGGACGATATCAATTCAGCTTATTCATTGAGTGTTGAGGCTGCTTACATTAACCAGAATTTCTCTCAGCAGGTTTTGGTTAGAGATGGGAATAAGGTCACTTTCGAGGAGCCCAACCCATTTGCAAATGAGGGGGAGGAAGTTGCCTCTGTTGCTTATCGGTACAGAAGGTGGAAGCTGGACAGTGAGGTGTCTCTGGTTGCAAGGTGTGAGGTTCAGAGTGTTATGGAGGTTAACAACCAGAGGTCGTTTTTGACTCTGAATGCGCTCAATGAATTTGATCCTAAATATTCTGGTGTGGATTGGAGGCAGAAATTGGAGACTCAGAGGGGTGCTGTTTTGGCCAATGAGCTTAAGAACAATGCTAACAAGTTGGCTAAATGGACTGCACAAGCTCTATTAGCTGGTGCTGATATGATGAAGCTGGGTTATGTTTCAAGGGTTCATCCTCGTGATCACTTCAACCATGTGATTTTGGCTGTGAATGGATATAAGCCCAAGGAGTTTTCCTCGCAGATTAATCTGAACCAGGCCAGTATGTGGGGAATTGTAAAGTCTATTGTGGACTTGTGTATGAAACTGAAGGAGGGTAAGTATAGGACGAGCAAGTTCAGCCCCCTACTGAGGATGGCCAAGGTGCAGAGCCAAATATTGCTGCAACTGATGTGGAGGATAAAGAGGTTGAAGCTCAAGCTTAAATGGTTAAGTTTGATACTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003743 GO:0003824 GO:0004721 GO:0004722 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005654 GO:0005737 GO:0005783 GO:0005789 GO:0005829 GO:0005852 GO:0005911 GO:0006412 GO:0006413 GO:0006464 GO:0006470 GO:0006518 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006913 GO:0007154 GO:0007165 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009506 GO:0009628 GO:0009639 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010017 GO:0010019 GO:0010035 GO:0010038 GO:0010380 GO:0010467 GO:0012505 GO:0016020 GO:0016021 GO:0016311 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0016791 GO:0019222 GO:0019538 GO:0023052 GO:0030054 GO:0030176 GO:0031224 GO:0031227 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031984 GO:0032991 GO:0034641 GO:0034645 GO:0036211 GO:0042175 GO:0042221 GO:0042578 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046686 GO:0046906 GO:0046907 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051169 GO:0051171 GO:0051172 GO:0051179 GO:0051193 GO:0051195 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055044 GO:0065007 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071704 GO:0090056 GO:0097159 GO:0098827 GO:0104004 GO:0140096 GO:1901363 GO:1901401 GO:1901402 GO:1901463 GO:1901464 GO:1901564 GO:1901566 GO:1901576 GO:1902325
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
eIF-3_zeta

Protein Analysis

542

Amino Acids

62.16

Weight (kDa)

9.26

Isoelectric Point (pI)

38.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
eIF-3_zeta PF05091 7 - 501 2.1e-187 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010260)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G20980 AT4G20980 AT4G20980 AT4G20980 AT5G44320
fragaria_vesca FvH4_3g37950 FvH4_5g27490
malus_domestica MD05G1338100.v1.1
prunus_persica Prupe.4G048700_v2.0.a1
pyrus_communis pycom10g24520
rosa_chinensis RchiOBHm_Chr5g0048541
rosa_laevigata RLG00000034531
rosa_multiflora Rmu_sc0007341.1_g000041
rosa_roxburghii Rroxscaffold_1G00033270
rosa_rugosa Rorug05G0239400
rosa_samantha Rh5AG319100 Rh5BG329500 Rh5CG355200 Rh5DG340700
rosa_wichuraiana Rw0G021230 Rw5G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 362
Acc36I ACCTGC 1 cut(s) 967
AccB7I CCANNNNNTGG 1 cut(s) 1446
AccBSI CCGCTC 2 cut(s) 129, 649
AccI GTMKAC 1 cut(s) 276
AccII CGCG 3 cut(s) 295, 354, 381
AclWI GGATC 8 cut(s) 155, 426, 511, 519, 576, 686, 745, 1181
AcoI YGGCCR 3 cut(s) 142, 1248, 1536
AcsI RAATTY 3 cut(s) 302, 964, 1181
AcuI CTGAAG 1 cut(s) 1508
AcyI GRCGYC 2 cut(s) 27, 204
AfaI GTAC 1 cut(s) 1070
AfiI CCNNNNNNNGG 7 cut(s) 48, 305, 318, 358, 562, 1446, 1530
AflII CTTAAG 1 cut(s) 1259
AgsI TTSAA 8 cut(s) 37, 172, 472, 655, 673, 1344, 1369, 1591
AjnI CCWGG 1 cut(s) 1434
AjuI GAANNNNNNNTTGG 4 cut(s) 305, 337, 530, 562
Alw26I GTCTC 4 cut(s) 587, 872, 1104, 1220
AlwI GGATC 8 cut(s) 155, 426, 511, 519, 576, 686, 745, 1181
Ama87I CYCGRG 1 cut(s) 590
AoxI GGCC 8 cut(s) 52, 142, 180, 307, 369, 1248, 1437, 1536
ApaI GGGCCC 1 cut(s) 56
ApeKI GCWGC 4 cut(s) 328, 337, 947, 1561
ApoI RAATTY 3 cut(s) 302, 964, 1181
ArsI GACNNNNNNTTYG 2 cut(s) 194, 226
AseI ATTAAT 1 cut(s) 1425
AspLEI GCGC 5 cut(s) 381, 587, 639, 775, 1174
AspS9I GGNCC 7 cut(s) 52, 53, 159, 181, 186, 308, 871
AsuC2I CCSGG 3 cut(s) 179, 184, 240
AsuII TTCGAA 1 cut(s) 15
AvaI CYCGRG 1 cut(s) 590
AvaII GGWCC 3 cut(s) 159, 186, 871
BaeGI GKGCMC 1 cut(s) 56
BalI TGGCCA 2 cut(s) 1250, 1538
BanII GRGCYC 4 cut(s) 56, 403, 894, 1020
BauI CACGAG 1 cut(s) 1356
BbsI GAAGAC 2 cut(s) 202, 726
BbvI GCAGC 4 cut(s) 340, 349, 934, 1548
BccI CCATC 4 cut(s) 205, 839, 986, 1528
BceAI ACGGC 5 cut(s) 61, 191, 390, 438, 449
BciT130I CCWGG 1 cut(s) 1436
BclI TGATCA 1 cut(s) 1360
BcnI CCSGG 3 cut(s) 179, 184, 240
BcoDI GTCTC 4 cut(s) 587, 872, 1104, 1220
BfrI CTTAAG 1 cut(s) 1259
BfuAI ACCTGC 1 cut(s) 967
Bme1390I CCNGG 4 cut(s) 179, 184, 240, 1436
Bme18I GGWCC 3 cut(s) 159, 186, 871
BmeT110I CYCGRG 1 cut(s) 590
BmgT120I GGNCC 7 cut(s) 52, 53, 159, 181, 186, 308, 871
BmiI GGNNCC 7 cut(s) 53, 54, 161, 310, 323, 891, 1017
BmrFI CCNGG 4 cut(s) 179, 184, 240, 1436
BpiI GAAGAC 2 cut(s) 202, 726
BplI GAGNNNNNCTC 2 cut(s) 1400, 1432
BpmI CTGGAG 1 cut(s) 665
Bpu10I CCTNAGC 1 cut(s) 558
Bpu14I TTCGAA 1 cut(s) 15
BpuEI CTTGAG 1 cut(s) 1580
BpuMI CCSGG 3 cut(s) 179, 184, 240
BsaHI GRCGYC 2 cut(s) 27, 204
BsaI GGTCTC 2 cut(s) 587, 872
BsaJI CCNNGG 5 cut(s) 238, 776, 906, 1404, 1539
BsaWI WCCGGW 1 cut(s) 58
BsaXI ACNNNNNCTCC 2 cut(s) 1484, 1514
Bsc4I CCNNNNNNNGG 7 cut(s) 48, 305, 318, 358, 562, 1446, 1530
Bse118I RCCGGY 1 cut(s) 411
Bse1I ACTGG 3 cut(s) 161, 695, 1440
BseBI CCWGG 1 cut(s) 1436
BseDI CCNNGG 5 cut(s) 238, 776, 906, 1404, 1539
BseGI GGATG 3 cut(s) 197, 1351, 1539
BseLI CCNNNNNNNGG 7 cut(s) 48, 305, 318, 358, 562, 1446, 1530
BseMII CTCAG 7 cut(s) 378, 549, 866, 899, 986, 1244, 1520
BseNI ACTGG 3 cut(s) 161, 695, 1440
BseRI GAGGAG 2 cut(s) 374, 1028
BseSI GKGCMC 1 cut(s) 56
BseXI GCAGC 4 cut(s) 340, 349, 934, 1548
BseYI CCCAGC 2 cut(s) 48, 1330
BsgI GTGCAG 2 cut(s) 1278, 1565
Bsh1236I CGCG 3 cut(s) 295, 354, 381
BshFI GGCC 8 cut(s) 54, 144, 182, 309, 371, 1250, 1439, 1538
BsiHKCI CYCGRG 1 cut(s) 590
BsiSI CCGG 8 cut(s) 59, 145, 179, 184, 240, 412, 494, 563
BslFI GGGAC 4 cut(s) 14, 92, 539, 809
BslI CCNNNNNNNGG 7 cut(s) 48, 305, 318, 358, 562, 1446, 1530
BsmAI GTCTC 4 cut(s) 587, 872, 1104, 1220
BsmFI GGGAC 4 cut(s) 14, 92, 539, 809
BsmI GAATGC 1 cut(s) 1174
BsnI GGCC 8 cut(s) 54, 144, 182, 309, 371, 1250, 1439, 1538
Bso31I GGTCTC 2 cut(s) 587, 872
BsoBI CYCGRG 1 cut(s) 590
Bsp119I TTCGAA 1 cut(s) 15
Bsp120I GGGCCC 1 cut(s) 52
Bsp1286I GDGCHC 4 cut(s) 56, 403, 894, 1020
BspANI GGCC 8 cut(s) 54, 144, 182, 309, 371, 1250, 1439, 1538
BspCNI CTCAG 7 cut(s) 379, 550, 865, 898, 985, 1243, 1521
BspFNI CGCG 3 cut(s) 295, 354, 381
BspLI GGNNCC 7 cut(s) 53, 54, 161, 310, 323, 891, 1017
BspMI ACCTGC 1 cut(s) 967
BspPI GGATC 8 cut(s) 155, 426, 511, 519, 576, 686, 745, 1181
BspQI GCTCTTC 1 cut(s) 581
BspT104I TTCGAA 1 cut(s) 15
BspTI CTTAAG 1 cut(s) 1259
BspTNI GGTCTC 2 cut(s) 587, 872
BsrBI CCGCTC 2 cut(s) 129, 649
BsrFI RCCGGY 1 cut(s) 411
BsrI ACTGG 3 cut(s) 161, 695, 1440
BssAI RCCGGY 1 cut(s) 411
BssECI CCNNGG 5 cut(s) 238, 776, 906, 1404, 1539
BssNI GRCGYC 2 cut(s) 27, 204
BssSI CACGAG 1 cut(s) 1356
BssT1I CCWWGG 3 cut(s) 906, 1404, 1539
Bst2BI CACGAG 1 cut(s) 1356
Bst2UI CCWGG 1 cut(s) 1436
Bst4CI ACNGT 4 cut(s) 553, 610, 733, 1091
Bst6I CTCTTC 1 cut(s) 581
BstACI GRCGYC 2 cut(s) 27, 204
BstAFI CTTAAG 1 cut(s) 1259
BstBI TTCGAA 1 cut(s) 15
BstC8I GCNNGC 2 cut(s) 403, 641
BstDEI CTNAG 7 cut(s) 387, 558, 852, 885, 972, 1230, 1529
BstF5I GGATG 3 cut(s) 197, 1351, 1539
BstFNI CGCG 3 cut(s) 295, 354, 381
BstHHI GCGC 5 cut(s) 381, 587, 639, 775, 1174
BstMAI GTCTC 4 cut(s) 587, 872, 1104, 1220
BstMWI GCNNNNNNNGC 7 cut(s) 334, 337, 862, 1058, 1247, 1307, 1518
BstNI CCWGG 1 cut(s) 1436
BstNSI RCATGY 2 cut(s) 448, 508
BstSCI CCNGG 4 cut(s) 177, 182, 238, 1434
BstSLI GKGCMC 1 cut(s) 56
BstUI CGCG 3 cut(s) 295, 354, 381
BstV1I GCAGC 4 cut(s) 340, 349, 934, 1548
BstV2I GAAGAC 2 cut(s) 202, 726
BstX2I RGATCY 3 cut(s) 431, 516, 568
BstYI RGATCY 3 cut(s) 431, 516, 568
BsuRI GGCC 8 cut(s) 54, 144, 182, 309, 371, 1250, 1439, 1538
BtgZI GCGATG 1 cut(s) 332
BtsCI GGATG 3 cut(s) 197, 1351, 1539
BtsIMutI CAGTG 3 cut(s) 549, 684, 1096
BveI ACCTGC 1 cut(s) 967
Cac8I GCNNGC 2 cut(s) 403, 641
CfoI GCGC 5 cut(s) 381, 587, 639, 775, 1174
Cfr10I RCCGGY 1 cut(s) 411
Cfr13I GGNCC 7 cut(s) 52, 53, 159, 181, 186, 308, 871
CseI GACGC 3 cut(s) 16, 212, 284
Csp6I GTAC 1 cut(s) 1069
CspCI CAANNNNNGTGG 2 cut(s) 1553, 1588
CviAII CATG 5 cut(s) 424, 445, 505, 875, 1373
CviQI GTAC 1 cut(s) 1069
DdeI CTNAG 7 cut(s) 387, 558, 852, 885, 972, 1230, 1529
DrdI GACNNNNNNGTC 1 cut(s) 362
DseDI GACNNNNNNGTC 1 cut(s) 362
EaeI YGGCCR 3 cut(s) 142, 1248, 1536
Eam1104I CTCTTC 1 cut(s) 581
EarI CTCTTC 1 cut(s) 581
EciI GGCGGA 2 cut(s) 55, 257
Eco130I CCWWGG 3 cut(s) 906, 1404, 1539
Eco24I GRGCYC 4 cut(s) 56, 403, 894, 1020
Eco31I GGTCTC 2 cut(s) 587, 872
Eco32I GATATC 2 cut(s) 487, 916
Eco47I GGWCC 3 cut(s) 159, 186, 871
Eco57I CTGAAG 1 cut(s) 1508
Eco88I CYCGRG 1 cut(s) 590
EcoO109I RGGNCCY 1 cut(s) 52
EcoRII CCWGG 1 cut(s) 1434
EcoRV GATATC 2 cut(s) 487, 916
EcoT14I CCWWGG 3 cut(s) 906, 1404, 1539
EcoT38I GRGCYC 4 cut(s) 56, 403, 894, 1020
ErhI CCWWGG 3 cut(s) 906, 1404, 1539
FaeI CATG 5 cut(s) 427, 448, 508, 878, 1376
FalI AAGNNNNNCTT 2 cut(s) 815, 847
FaqI GGGAC 4 cut(s) 14, 92, 539, 809
FatI CATG 5 cut(s) 423, 444, 504, 874, 1372
FauI CCCGC 2 cut(s) 134, 170
FbaI TGATCA 1 cut(s) 1360
FblI GTMKAC 1 cut(s) 276
FokI GGATG 3 cut(s) 184, 1338, 1546
FriOI GRGCYC 4 cut(s) 56, 403, 894, 1020
GlaI GCGC 5 cut(s) 380, 586, 638, 774, 1173
GsaI CCCAGC 2 cut(s) 52, 1334
GsuI CTGGAG 1 cut(s) 665
HaeIII GGCC 8 cut(s) 54, 144, 182, 309, 371, 1250, 1439, 1538
HapII CCGG 8 cut(s) 59, 145, 179, 184, 240, 412, 494, 563
HgaI GACGC 3 cut(s) 16, 212, 284
HhaI GCGC 5 cut(s) 381, 587, 639, 775, 1174
Hin1I GRCGYC 2 cut(s) 27, 204
Hin1II CATG 5 cut(s) 427, 448, 508, 878, 1376
Hin6I GCGC 5 cut(s) 379, 585, 637, 773, 1172
HinP1I GCGC 5 cut(s) 379, 585, 637, 773, 1172
HincII GTYRAC 3 cut(s) 277, 442, 1141
HindII GTYRAC 3 cut(s) 277, 442, 1141
HindIII AAGCTT 2 cut(s) 137, 1598
HinfI GANTC 7 cut(s) 12, 62, 230, 257, 618, 1162, 1228
HpaI GTTAAC 1 cut(s) 1141
HpaII CCGG 8 cut(s) 59, 145, 179, 184, 240, 412, 494, 563
Hpy166II GTNNAC 5 cut(s) 277, 442, 787, 1141, 1471
Hpy188I TCNGA 7 cut(s) 133, 202, 516, 1125, 1167, 1233, 1431
Hpy188III TCNNGA 6 cut(s) 526, 592, 655, 757, 887, 1358
Hpy8I GTNNAC 5 cut(s) 277, 442, 787, 1141, 1471
Hpy99I CGWCG 7 cut(s) 47, 206, 230, 278, 281, 359, 481
HpyAV CCTTC 9 cut(s) 43, 121, 130, 178, 274, 385, 541, 1068, 1483
HpyCH4III ACNGT 4 cut(s) 553, 610, 733, 1091
HpyCH4IV ACGT 1 cut(s) 105
HpyCH4V TGCA 6 cut(s) 713, 1031, 1109, 1295, 1546, 1564
HpyF10VI GCNNNNNNNGC 7 cut(s) 334, 337, 862, 1058, 1247, 1307, 1518
HpyF3I CTNAG 7 cut(s) 387, 558, 852, 885, 972, 1230, 1529
HpySE526I ACGT 1 cut(s) 105
Hsp92I GRCGYC 2 cut(s) 27, 204
Hsp92II CATG 5 cut(s) 427, 448, 508, 878, 1376
HspAI GCGC 5 cut(s) 379, 585, 637, 773, 1172
Ksp22I TGATCA 1 cut(s) 1360
KspAI GTTAAC 1 cut(s) 1141
LguI GCTCTTC 1 cut(s) 581
LmnI GCTCC 5 cut(s) 134, 345, 646, 889, 1015
Lsp1109I GCAGC 4 cut(s) 340, 349, 934, 1548
MaeII ACGT 1 cut(s) 105
MaeIII GTNAC 4 cut(s) 242, 407, 676, 1003
MbiI CCGCTC 2 cut(s) 129, 649
MboII GAAGA 5 cut(s) 202, 568, 640, 661, 731
MflI RGATCY 3 cut(s) 431, 516, 568
MhlI GDGCHC 4 cut(s) 56, 403, 894, 1020
MlsI TGGCCA 2 cut(s) 1250, 1538
MluCI AATT 6 cut(s) 302, 919, 964, 1181, 1220, 1452
MluNI TGGCCA 2 cut(s) 1250, 1538
MlyI GAGTC 4 cut(s) 239, 251, 1156, 1222
MmeI TCCRAC 4 cut(s) 114, 225, 246, 796
Mox20I TGGCCA 2 cut(s) 1250, 1538
MscI TGGCCA 2 cut(s) 1250, 1538
MseI TTAA 7 cut(s) 957, 1140, 1260, 1425, 1602, 1610, 1624
MslI CAYNNNNRTG 1 cut(s) 1356
Msp20I TGGCCA 2 cut(s) 1250, 1538
MspCI CTTAAG 1 cut(s) 1259
MspI CCGG 8 cut(s) 59, 145, 179, 184, 240, 412, 494, 563
MspR9I CCNGG 4 cut(s) 179, 184, 240, 1436
Mva1269I GAATGC 1 cut(s) 1174
MvaI CCWGG 1 cut(s) 1436
MvnI CGCG 3 cut(s) 295, 354, 381
MwoI GCNNNNNNNGC 7 cut(s) 334, 337, 862, 1058, 1247, 1307, 1518
NciI CCSGG 3 cut(s) 179, 184, 240
NlaIII CATG 5 cut(s) 427, 448, 508, 878, 1376
NlaIV GGNNCC 7 cut(s) 53, 54, 161, 310, 323, 891, 1017
NmeAIII GCCGAG 1 cut(s) 801
NmuCI GTSAC 3 cut(s) 407, 676, 1003
NspI RCATGY 2 cut(s) 448, 508
NspV TTCGAA 1 cut(s) 15
PaeR7I CTCGAG 1 cut(s) 590
PciSI GCTCTTC 1 cut(s) 581
PcsI WCGNNNNNNNCGW 5 cut(s) 12, 210, 252, 363, 755
PctI GAATGC 1 cut(s) 1174
PfeI GAWTC 3 cut(s) 12, 62, 618
PflFI GACNNNGTC 1 cut(s) 206
PflMI CCANNNNNTGG 1 cut(s) 1446
PleI GAGTC 4 cut(s) 238, 251, 1156, 1222
PpsI GAGTC 4 cut(s) 238, 251, 1156, 1222
PshBI ATTAAT 1 cut(s) 1425
Psp6I CCWGG 1 cut(s) 1434
PspFI CCCAGC 2 cut(s) 48, 1330
PspGI CCWGG 1 cut(s) 1434
PspN4I GGNNCC 7 cut(s) 53, 54, 161, 310, 323, 891, 1017
PspOMI GGGCCC 1 cut(s) 52
PspPI GGNCC 7 cut(s) 52, 53, 159, 181, 186, 308, 871
PsuI RGATCY 3 cut(s) 431, 516, 568
PsyI GACNNNGTC 1 cut(s) 206
RsaI GTAC 1 cut(s) 1070
RsaNI GTAC 1 cut(s) 1069
RseI CAYNNNNRTG 1 cut(s) 1356
SalI GTCGAC 1 cut(s) 275
SapI GCTCTTC 1 cut(s) 581
SaqAI TTAA 7 cut(s) 957, 1140, 1260, 1425, 1602, 1610, 1624
Sau96I GGNCC 7 cut(s) 52, 53, 159, 181, 186, 308, 871
SchI GAGTC 4 cut(s) 239, 251, 1156, 1222
ScrFI CCNGG 4 cut(s) 179, 184, 240, 1436
SduI GDGCHC 4 cut(s) 56, 403, 894, 1020
Sfr274I CTCGAG 1 cut(s) 590
SfuI TTCGAA 1 cut(s) 15
SgrDI CGTCGACG 1 cut(s) 275
SinI GGWCC 3 cut(s) 159, 186, 871
SlaI CTCGAG 1 cut(s) 590
SmiMI CAYNNNNRTG 1 cut(s) 1356
SmlI CTYRAG 3 cut(s) 590, 1259, 1595
SmoI CTYRAG 3 cut(s) 590, 1259, 1595
Sse9I AATT 6 cut(s) 302, 919, 964, 1181, 1220, 1452
SspI AATATT 2 cut(s) 1196, 1557
StyD4I CCNGG 4 cut(s) 177, 182, 238, 1434
StyI CCWWGG 3 cut(s) 906, 1404, 1539
TaaI ACNGT 4 cut(s) 553, 610, 733, 1091
TaiI ACGT 1 cut(s) 108
TaqII GACCGA 2 cut(s) 618, 859
TasI AATT 6 cut(s) 302, 919, 964, 1181, 1220, 1452
TauI GCSGC 6 cut(s) 27, 292, 295, 354, 464, 585
TfiI GAWTC 3 cut(s) 12, 62, 618
Tru1I TTAA 7 cut(s) 957, 1140, 1260, 1425, 1602, 1610, 1624
Tru9I TTAA 7 cut(s) 957, 1140, 1260, 1425, 1602, 1610, 1624
TscAI CASTG 3 cut(s) 556, 691, 1096
TseFI GTSAC 3 cut(s) 407, 676, 1003
TseI GCWGC 4 cut(s) 328, 337, 947, 1561
Tsp45I GTSAC 3 cut(s) 407, 676, 1003
TspDTI ATGAA 7 cut(s) 440, 732, 921, 1194, 1340, 1340, 1496
TspGWI ACGGA 1 cut(s) 294
TspRI CASTG 3 cut(s) 556, 691, 1096
Tth111I GACNNNGTC 1 cut(s) 206
Van91I CCANNNNNTGG 1 cut(s) 1446
Vha464I CTTAAG 1 cut(s) 1259
VpaK11BI GGWCC 3 cut(s) 159, 186, 871
VspI ATTAAT 1 cut(s) 1425
XapI RAATTY 3 cut(s) 302, 964, 1181
XceI RCATGY 2 cut(s) 448, 508
XhoI CTCGAG 1 cut(s) 590
XmiI GTMKAC 1 cut(s) 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.