AT5G44320

mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7-methylguanosine cap of a subset of mRNAs

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0010260
Physical Location & Seq
Reverse (-)
17854547 .. 17856740
2194 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G44320.1

Sequence Viewer

Length: 1767 bp
ATGGTGTTTGAAGCATTCGAAGTCGGCACAGTCCCATTCAATTCCGATGGTTGGGGACCACCAGATGCTTCCGACACTTCCTCCACCAGCGTCGCGGCGGCGAATCTCCTCCCAAACGTCCCCTTCGCTTCCTTCTCACGATCCGAAAAACTCGGACGCGTTGCTGATTGGACTCGAGCTCTCTCAAATCCATCAGCTCGTCCTCACACCGGATCCAAATCAGATCCATCAGCGATCTTCGATTTCTCAGCTTTTGCAGTAGATGAAGGATTTGGTCTAACAAACTCAGGTGGAAACGCCGACGAAGACGCCGCTTTCCGATTAGTCGACGGAAAACCACCGCCGCGTCCTAAATTCGGACCTAAATGGAGATTCAATCAATACCATAACCGAAATCAGCTTCCTCAACGTCGTGATGAAGAAGTTGAAGCTAAGAAACGTGAAGCTGAGAAAGATCGAGCTCGTCGTGATCGTCTCTACAATAACAATCGTAACAATATTCATCAGCAACGCCGTGAAGCCGCCGCGTTTAAATCATCAGTTGATATTCAACCGGAATGGAATATGCTTGAGCAGATTCCGTTTTCGACTTTCTCTAAGCTTTCGTTTACAGTTTCTGAACCTGAAGATCTTCTTCTTTGTGGTGGACTTGAGTCTTATGATCGGAGTTTTGATCGTATTACTCCTAAAGCTGATCGTAGACTTGAGCGTTTCAAGAACAGAAGCTTTAAGGTTACTACAAGTGATGATCTTGTGATCAGACGTCTTGCTAAAGAAGATAAAGCTACTGTTTTTGCTACTGATGCTATTCTAGCTGCTCTTATGTGTGCTCCTAGATCGGTTTATTCATGGGATCTTGTGATTCAACGTGTTGGGAATAAGCTTTTCTTTGATAAGAGAGATGGGTCACCGCTTGATTTGTTATCTGTTCATGAGACTTCTCAAGAGCCTTTGCCTGAGGGTAAAGATGATATTAACTCTGCTCATTCTCTAGGTCTGGAGGCTGCTTATATTAATCAGAATTTTGCTCAGCAGGTTTTGGTTAAGAATGGGAAAAGGGAAACTTTTGATGAGCCAATTCCTAATGTTAATGAAGGTGAAGAGAATGCTTCTATTGCTTATAGGTATAGGAGATGGAAGCTTGATGATAGTATGTATCTAGTTGCTAGGTGTGAGTTACAGAGCACTGTTGATTTGAATAACCAGAGATCGTTTTTAACTTTGAATGCTCTTAACGAGTTTGATCCTAAGTACTCTGGTGTTGATTGGAGACAGAAGCTTGAGACTCAGAGAGGTGCGGTTTTAGCTAATGAGTTGAAGAACAATGGTAATAAGTTAGCTAAATGGACTGCGCAGGCTCTCTTGGCTAATGCGGATATGATGAAGATTGGGTTTGTTTCGAGGGTTCATCCTCGTGATCATTTTAACCATGTTATATTATCGGTTTTGGGGTATAAGCCGAAAGATTTCGCTGGGCAGATCAATCTGAACACTAACAATATGTGGGGAATTGTGAAGTCGATTGTTGATCTGTGTATGAAGTTAAGTGAAGGAAAGTATGTTCTAGTGAAGGATCCATCGAAGCCTCAAGTTAGGATTTACGAAGTTCCGGCTGATGCATTTGACAATGATTATGTGGAGGAGCCACTCCCTGAAGATGAACAGGTTCAGCCACCTGAGGAGAACACTGATGCAGGAGCAGAGACTAATGGGGTTTCCTCTACTAATGTAGCTGTAGAGGATAAGAAATCCGAAGTTGAAGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003743 GO:0003824 GO:0004721 GO:0004722 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005654 GO:0005737 GO:0005783 GO:0005789 GO:0005829 GO:0005852 GO:0005911 GO:0006412 GO:0006413 GO:0006464 GO:0006470 GO:0006518 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006913 GO:0007154 GO:0007165 GO:0008135 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009506 GO:0009628 GO:0009639 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010017 GO:0010019 GO:0010035 GO:0010038 GO:0010380 GO:0010467 GO:0012505 GO:0016020 GO:0016021 GO:0016311 GO:0016604 GO:0016607 GO:0016787 GO:0016788 GO:0016791 GO:0019222 GO:0019538 GO:0023052 GO:0030054 GO:0030176 GO:0031224 GO:0031227 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0031984 GO:0032991 GO:0034641 GO:0034645 GO:0036211 GO:0042175 GO:0042221 GO:0042578 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046686 GO:0046906 GO:0046907 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051169 GO:0051171 GO:0051172 GO:0051179 GO:0051193 GO:0051195 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055044 GO:0065007 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071704 GO:0090056 GO:0097159 GO:0098827 GO:0104004 GO:0140096 GO:1901363 GO:1901401 GO:1901402 GO:1901463 GO:1901464 GO:1901564 GO:1901566 GO:1901576 GO:1902325
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
eIF-3_zeta

Protein Analysis

588

Amino Acids

66.22

Weight (kDa)

5.44

Isoelectric Point (pI)

36.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
eIF-3_zeta PF05091 6 - 535 6.3e-188 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010260)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G20980 AT4G20980 AT4G20980 AT4G20980 AT5G44320
fragaria_vesca FvH4_3g37950 FvH4_5g27490
malus_domestica MD05G1338100.v1.1
prunus_persica Prupe.4G048700_v2.0.a1
pyrus_communis pycom10g24520
rosa_chinensis RchiOBHm_Chr5g0048541
rosa_laevigata RLG00000034531
rosa_multiflora Rmu_sc0007341.1_g000041
rosa_roxburghii Rroxscaffold_1G00033270
rosa_rugosa Rorug05G0239400
rosa_samantha Rh5AG319100 Rh5BG329500 Rh5CG355200 Rh5DG340700
rosa_wichuraiana Rw0G021230 Rw5G029840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 766
Acc16I TGCGCA 1 cut(s) 1353
Acc36I ACCTGC 1 cut(s) 1024
AccI GTMKAC 2 cut(s) 327, 700
AccII CGCG 4 cut(s) 95, 159, 346, 527
AclWI GGATC 8 cut(s) 135, 207, 218, 220, 861, 1238, 1568, 1581
AcsI RAATTY 2 cut(s) 353, 1021
AcuI CTGAAG 2 cut(s) 645, 1674
AcyI GRCGYC 2 cut(s) 309, 763
AfaI GTAC 1 cut(s) 1253
AfiI CCNNNNNNNGG 3 cut(s) 51, 209, 356
AflIII ACRYGT 2 cut(s) 157, 868
AloI GAACNNNNNNTCC 2 cut(s) 1545, 1577
Alw21I GWGCWC 4 cut(s) 181, 463, 832, 1187
Alw26I GTCTC 5 cut(s) 479, 929, 1264, 1277, 1697
AlwI GGATC 8 cut(s) 135, 207, 218, 220, 861, 1238, 1568, 1581
AlwNI CAGNNNCTG 1 cut(s) 617
Ama87I CYCGRG 1 cut(s) 174
ApeKI GCWGC 2 cut(s) 815, 1004
ApoI RAATTY 2 cut(s) 353, 1021
AseI ATTAAT 1 cut(s) 1014
Asp700I GAANNNNTTC 3 cut(s) 630, 1466, 1665
AspLEI GCGC 1 cut(s) 1354
AspS9I GGNCC 2 cut(s) 56, 359
AsuHPI GGTGA 2 cut(s) 900, 1109
AsuII TTCGAA 1 cut(s) 18
AvaI CYCGRG 1 cut(s) 174
AvaII GGWCC 2 cut(s) 56, 359
AxyI CCTNAGG 2 cut(s) 957, 1677
BamHI GGATCC 2 cut(s) 212, 1573
BanII GRGCYC 2 cut(s) 181, 463
BauI CACGAG 1 cut(s) 1413
BbsI GAAGAC 1 cut(s) 312
Bbv12I GWGCWC 4 cut(s) 181, 463, 832, 1187
BbvI GCAGC 2 cut(s) 802, 991
BccI CCATC 6 cut(s) 41, 199, 235, 896, 1128, 1585
BceAI ACGGC 1 cut(s) 498
BclI TGATCA 2 cut(s) 756, 1417
BcoDI GTCTC 5 cut(s) 479, 929, 1264, 1277, 1697
BfaI CTAG 6 cut(s) 812, 834, 992, 1160, 1167, 1565
BfmI CTRYAG 1 cut(s) 1734
BfuAI ACCTGC 1 cut(s) 1024
BglII AGATCT 1 cut(s) 628
BisI GCNGC 8 cut(s) 96, 99, 312, 344, 522, 525, 816, 1005
BlpI GCTNAGC 1 cut(s) 1029
BlsI GCNGC 8 cut(s) 97, 100, 313, 345, 523, 526, 817, 1006
BmcAI AGTACT 1 cut(s) 1253
Bme18I GGWCC 2 cut(s) 56, 359
BmeT110I CYCGRG 1 cut(s) 174
BmgT120I GGNCC 2 cut(s) 56, 359
BmiI GGNNCC 4 cut(s) 57, 214, 1575, 1644
BmsI GCATC 4 cut(s) 55, 793, 1606, 1681
BoxI GACNNNNGTC 1 cut(s) 652
BpiI GAAGAC 1 cut(s) 312
BpmI CTGGAG 1 cut(s) 1019
Bpu1102I GCTNAGC 1 cut(s) 1029
Bpu14I TTCGAA 1 cut(s) 18
BpuEI CTTGAG 6 cut(s) 590, 671, 725, 927, 1301, 1572
BsaBI GATNNNNATC 1 cut(s) 217
BsaHI GRCGYC 2 cut(s) 309, 763
BsaWI WCCGGW 2 cut(s) 209, 553
BsaXI ACNNNNNCTCC 2 cut(s) 65, 95
Bsc4I CCNNNNNNNGG 3 cut(s) 51, 209, 356
Bse21I CCTNAGG 2 cut(s) 957, 1677
Bse8I GATNNNNATC 1 cut(s) 217
BseGI GGATG 1 cut(s) 1408
BseJI GATNNNNATC 1 cut(s) 217
BseLI CCNNNNNNNGG 3 cut(s) 51, 209, 356
BseMII CTCAG 7 cut(s) 261, 300, 438, 948, 1043, 1301, 1668
BseRI GAGGAG 3 cut(s) 98, 1655, 1694
BseXI GCAGC 2 cut(s) 802, 991
BseYI CCCAGC 1 cut(s) 1472
Bsh1236I CGCG 4 cut(s) 95, 159, 346, 527
BsiHKAI GWGCWC 4 cut(s) 181, 463, 832, 1187
BsiHKCI CYCGRG 1 cut(s) 174
BsiSI CCGG 3 cut(s) 210, 554, 1610
BslFI GGGAC 3 cut(s) 17, 69, 104
BslI CCNNNNNNNGG 3 cut(s) 51, 209, 356
BsmAI GTCTC 5 cut(s) 479, 929, 1264, 1277, 1697
BsmBI CGTCTC 1 cut(s) 479
BsmFI GGGAC 3 cut(s) 17, 69, 104
BsmI GAATGC 3 cut(s) 14, 1111, 1231
BsoBI CYCGRG 1 cut(s) 174
Bsp119I TTCGAA 1 cut(s) 18
Bsp1286I GDGCHC 4 cut(s) 181, 463, 832, 1187
Bsp1720I GCTNAGC 1 cut(s) 1029
BspCNI CTCAG 7 cut(s) 260, 299, 439, 949, 1042, 1300, 1669
BspFNI CGCG 4 cut(s) 95, 159, 346, 527
BspHI TCATGA 1 cut(s) 931
BspLI GGNNCC 4 cut(s) 57, 214, 1575, 1644
BspMI ACCTGC 1 cut(s) 1024
BspPI GGATC 8 cut(s) 135, 207, 218, 220, 861, 1238, 1568, 1581
BspT104I TTCGAA 1 cut(s) 18
BssNI GRCGYC 2 cut(s) 309, 763
BssSI CACGAG 1 cut(s) 1413
Bst2BI CACGAG 1 cut(s) 1413
Bst4CI ACNGT 4 cut(s) 31, 613, 790, 1189
Bst6I CTCTTC 1 cut(s) 1095
BstACI GRCGYC 2 cut(s) 309, 763
BstBI TTCGAA 1 cut(s) 18
BstC8I GCNNGC 1 cut(s) 1356
BstEII GGTNACC 1 cut(s) 906
BstF5I GGATG 1 cut(s) 1408
BstFNI CGCG 4 cut(s) 95, 159, 346, 527
BstHHI GCGC 1 cut(s) 1354
BstMAI GTCTC 5 cut(s) 479, 929, 1264, 1277, 1697
BstMWI GCNNNNNNNGC 5 cut(s) 803, 812, 1115, 1304, 1364
BstPAI GACNNNNGTC 1 cut(s) 652
BstPI GGTNACC 1 cut(s) 906
BstSFI CTRYAG 1 cut(s) 1734
BstUI CGCG 4 cut(s) 95, 159, 346, 527
BstV1I GCAGC 2 cut(s) 802, 991
BstV2I GAAGAC 1 cut(s) 312
BstX2I RGATCY 5 cut(s) 212, 223, 628, 853, 1573
BstYI RGATCY 5 cut(s) 212, 223, 628, 853, 1573
Bsu36I CCTNAGG 2 cut(s) 957, 1677
BtsCI GGATG 1 cut(s) 1408
BtsIMutI CAGTG 2 cut(s) 1185, 1686
BveI ACCTGC 1 cut(s) 1024
Cac8I GCNNGC 1 cut(s) 1356
CaiI CAGNNNCTG 1 cut(s) 617
CciI TCATGA 1 cut(s) 931
CfoI GCGC 1 cut(s) 1354
Cfr13I GGNCC 2 cut(s) 56, 359
CseI GACGC 4 cut(s) 79, 165, 317, 335
Csp6I GTAC 1 cut(s) 1252
CviAII CATG 3 cut(s) 849, 932, 1430
CviQI GTAC 1 cut(s) 1252
DraI TTTAAA 1 cut(s) 532
Eam1104I CTCTTC 1 cut(s) 1095
EarI CTCTTC 1 cut(s) 1095
Ecl136II GAGCTC 2 cut(s) 179, 461
Eco24I GRGCYC 2 cut(s) 181, 463
Eco47I GGWCC 2 cut(s) 56, 359
Eco53kI GAGCTC 2 cut(s) 179, 461
Eco57I CTGAAG 2 cut(s) 645, 1674
Eco81I CCTNAGG 2 cut(s) 957, 1677
Eco88I CYCGRG 1 cut(s) 174
Eco91I GGTNACC 1 cut(s) 906
EcoICRI GAGCTC 2 cut(s) 179, 461
EcoO65I GGTNACC 1 cut(s) 906
EcoT22I ATGCAT 1 cut(s) 1621
EcoT38I GRGCYC 2 cut(s) 181, 463
Esp3I CGTCTC 1 cut(s) 479
FaeI CATG 3 cut(s) 852, 935, 1433
FalI AAGNNNNNCTT 6 cut(s) 618, 650, 872, 904, 1048, 1080
FaqI GGGAC 3 cut(s) 17, 69, 104
FatI CATG 3 cut(s) 848, 931, 1429
FbaI TGATCA 2 cut(s) 756, 1417
FblI GTMKAC 2 cut(s) 327, 700
Fnu4HI GCNGC 8 cut(s) 96, 99, 312, 344, 522, 525, 816, 1005
FokI GGATG 1 cut(s) 1395
FriOI GRGCYC 2 cut(s) 181, 463
Fsp4HI GCNGC 8 cut(s) 96, 99, 312, 344, 522, 525, 816, 1005
FspBI CTAG 6 cut(s) 812, 834, 992, 1160, 1167, 1565
FspI TGCGCA 1 cut(s) 1353
GlaI GCGC 1 cut(s) 1353
GluI GCNGC 8 cut(s) 96, 99, 312, 344, 522, 525, 816, 1005
GsaI CCCAGC 1 cut(s) 1476
GsuI CTGGAG 1 cut(s) 1019
HapII CCGG 3 cut(s) 210, 554, 1610
HgaI GACGC 4 cut(s) 79, 165, 317, 335
HhaI GCGC 1 cut(s) 1354
Hin1I GRCGYC 2 cut(s) 309, 763
Hin1II CATG 3 cut(s) 852, 935, 1433
Hin6I GCGC 1 cut(s) 1352
HinP1I GCGC 1 cut(s) 1352
HincII GTYRAC 1 cut(s) 328
HindII GTYRAC 1 cut(s) 328
HindIII AAGCTT 5 cut(s) 599, 724, 881, 1139, 1277
HinfI GANTC 7 cut(s) 103, 172, 372, 577, 653, 862, 1285
HpaII CCGG 3 cut(s) 210, 554, 1610
HphI GGTGA 2 cut(s) 900, 1109
Hpy166II GTNNAC 4 cut(s) 328, 609, 647, 701
Hpy188III TCNNGA 8 cut(s) 138, 413, 467, 715, 932, 944, 998, 1415
Hpy8I GTNNAC 4 cut(s) 328, 609, 647, 701
Hpy99I CGWCG 5 cut(s) 95, 305, 332, 414, 468
HpyAV CCTTC 6 cut(s) 133, 142, 260, 1088, 1544, 1564
HpyCH4III ACNGT 4 cut(s) 31, 613, 790, 1189
HpyCH4IV ACGT 5 cut(s) 117, 409, 439, 763, 868
HpyCH4V TGCA 3 cut(s) 257, 1619, 1694
HpyF10VI GCNNNNNNNGC 5 cut(s) 803, 812, 1115, 1304, 1364
HpySE526I ACGT 5 cut(s) 117, 409, 439, 763, 868
Hsp92I GRCGYC 2 cut(s) 309, 763
Hsp92II CATG 3 cut(s) 852, 935, 1433
HspAI GCGC 1 cut(s) 1352
Ksp22I TGATCA 2 cut(s) 756, 1417
LmnI GCTCC 3 cut(s) 835, 1642, 1697
Lsp1109I GCAGC 2 cut(s) 802, 991
LweI GCATC 4 cut(s) 55, 793, 1606, 1681
MaeI CTAG 6 cut(s) 812, 834, 992, 1160, 1167, 1565
MaeII ACGT 5 cut(s) 117, 409, 439, 763, 868
MaeIII GTNAC 4 cut(s) 491, 733, 906, 1176
MflI RGATCY 5 cut(s) 212, 223, 628, 853, 1573
MhlI GDGCHC 4 cut(s) 181, 463, 832, 1187
MluCI AATT 5 cut(s) 40, 353, 1021, 1077, 1509
MluI ACGCGT 1 cut(s) 157
MlyI GAGTC 3 cut(s) 166, 662, 1279
MmeI TCCRAC 1 cut(s) 96
Mph1103I ATGCAT 1 cut(s) 1621
MroXI GAANNNNTTC 3 cut(s) 630, 1466, 1665
MslI CAYNNNNRTG 1 cut(s) 1413
MspI CCGG 3 cut(s) 210, 554, 1610
Mva1269I GAATGC 3 cut(s) 14, 1111, 1231
MvnI CGCG 4 cut(s) 95, 159, 346, 527
MwoI GCNNNNNNNGC 5 cut(s) 803, 812, 1115, 1304, 1364
NlaIII CATG 3 cut(s) 852, 935, 1433
NlaIV GGNNCC 4 cut(s) 57, 214, 1575, 1644
NmuCI GTSAC 1 cut(s) 906
NsbI TGCGCA 1 cut(s) 1353
NsiI ATGCAT 1 cut(s) 1621
NspV TTCGAA 1 cut(s) 18
PaeR7I CTCGAG 1 cut(s) 174
PagI TCATGA 1 cut(s) 931
PcsI WCGNNNNNNNCGW 2 cut(s) 463, 469
PctI GAATGC 3 cut(s) 14, 1111, 1231
PdmI GAANNNNTTC 3 cut(s) 630, 1466, 1665
PfeI GAWTC 4 cut(s) 103, 372, 577, 862
PkrI GCNGC 8 cut(s) 97, 100, 313, 345, 523, 526, 817, 1006
PleI GAGTC 3 cut(s) 166, 661, 1279
PpsI GAGTC 3 cut(s) 166, 661, 1279
PshAI GACNNNNGTC 1 cut(s) 652
PshBI ATTAAT 1 cut(s) 1014
Psp124BI GAGCTC 2 cut(s) 181, 463
PspEI GGTNACC 1 cut(s) 906
PspFI CCCAGC 1 cut(s) 1472
PspN4I GGNNCC 4 cut(s) 57, 214, 1575, 1644
PspPI GGNCC 2 cut(s) 56, 359
PspXI VCTCGAGB 1 cut(s) 174
PstNI CAGNNNCTG 1 cut(s) 617
PsuI RGATCY 5 cut(s) 212, 223, 628, 853, 1573
RsaI GTAC 1 cut(s) 1253
RsaNI GTAC 1 cut(s) 1252
RseI CAYNNNNRTG 1 cut(s) 1413
SacI GAGCTC 2 cut(s) 181, 463
SalI GTCGAC 1 cut(s) 326
SatI GCNGC 8 cut(s) 96, 99, 312, 344, 522, 525, 816, 1005
Sau96I GGNCC 2 cut(s) 56, 359
ScaI AGTACT 1 cut(s) 1253
SchI GAGTC 3 cut(s) 166, 662, 1279
SduI GDGCHC 4 cut(s) 181, 463, 832, 1187
SfaNI GCATC 4 cut(s) 55, 793, 1606, 1681
SfcI CTRYAG 1 cut(s) 1734
Sfr274I CTCGAG 1 cut(s) 174
SfuI TTCGAA 1 cut(s) 18
SinI GGWCC 2 cut(s) 56, 359
SlaI CTCGAG 1 cut(s) 174
SmiMI CAYNNNNRTG 1 cut(s) 1413
SmlI CTYRAG 7 cut(s) 174, 569, 650, 704, 942, 1280, 1587
SmoI CTYRAG 7 cut(s) 174, 569, 650, 704, 942, 1280, 1587
Sse9I AATT 5 cut(s) 40, 353, 1021, 1077, 1509
SspI AATATT 1 cut(s) 499
SspMI CTAG 6 cut(s) 812, 834, 992, 1160, 1167, 1565
SstI GAGCTC 2 cut(s) 181, 463
TaaI ACNGT 4 cut(s) 31, 613, 790, 1189
TaiI ACGT 5 cut(s) 120, 412, 442, 766, 871
TaqI TCGA 9 cut(s) 18, 175, 240, 327, 457, 587, 1400, 1520, 1580
TasI AATT 5 cut(s) 40, 353, 1021, 1077, 1509
TatI WGTACW 1 cut(s) 1251
TauI GCSGC 6 cut(s) 98, 101, 314, 346, 524, 527
TfiI GAWTC 4 cut(s) 103, 372, 577, 862
TscAI CASTG 2 cut(s) 1192, 1693
TseFI GTSAC 1 cut(s) 906
TseI GCWGC 2 cut(s) 815, 1004
Tsp45I GTSAC 1 cut(s) 906
TspGWI ACGGA 2 cut(s) 345, 570
TspRI CASTG 2 cut(s) 1192, 1693
VpaK11BI GGWCC 2 cut(s) 56, 359
VspI ATTAAT 1 cut(s) 1014
XapI RAATTY 2 cut(s) 353, 1021
XhoI CTCGAG 1 cut(s) 174
XmiI GTMKAC 2 cut(s) 327, 700
XmnI GAANNNNTTC 3 cut(s) 630, 1466, 1665
XspI CTAG 6 cut(s) 812, 834, 992, 1160, 1167, 1565
ZraI GACGTC 1 cut(s) 764
ZrmI AGTACT 1 cut(s) 1253
Zsp2I ATGCAT 1 cut(s) 1621
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.