AT4G21680

proton-dependent oligopeptide transport (POT) family protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
11517353 .. 11519805
2453 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G21680.1

Sequence Viewer

Length: 1770 bp
ATGGATCAAAAAGTTAGACAGTTTGAGGTTTGCACTCAAGACGGTAGCGTTGATCGTCACGGCAATCCAGCTATCCGAGCTAATACCGGCAAATGGCTCACTGCTATTCTCATTCTAGTGAATCAAGGACTAGCTACGCTTGCGTTCTTCGGTGTAGGAGTGAATTTGGTTCTGTTTCTGACTCGAGTGATGGGACAAGACAATGCAGAAGCGGCTAATAATGTTAGTAAATGGACAGGAACTGTCTATATCTTCTCTTTGCTTGGTGCTTTCCTCAGTGACTCTTATTGGGGACGTTACAAGACTTGTGCTATCTTTCAAGCAAGTTTCGTTGCAGGGTTGATGATGTTATCTTTATCTACTGGTGCGTTATTGCTTGAACCAAGTGGTTGTGGAGTTGAAGATTCGCCGTGTAAGCCTCATTCGACGTTTAAGACGGTTCTGTTTTATCTGTCGGTGTATCTAATCGCGTTAGGGTATGGTGGTTATCAGCCGAACATAGCTACTTTTGGAGCTGATCAGTTTGATGCGGAGGATTCCGTTGAAGGACACTCGAAAATCGCGTTTTTCAGTTACTTTTACTTGGCTCTGAATCTTGGATCGCTCTTCTCAAATACTGTCTTGGGTTACTTTGAGGATCAAGGGGAATGGCCGCTTGGATTTTGGGCGTCTGCTGGCTCTGCTTTTGCGGGGTTAGTGCTTTTCTTGATTGGCACGCCAAAGTACCGACACTTTACGCCTAGAGAGAGTCCTTGGTCTAGATTCTGCCAAGTGTTGGTTGCTGCAACAAGAAAGGCTAAGATTGATGTGCACCATGAAGAGTTGAATCTCTATGATTCTGAGACTCAATACACTGGAGATAAGAAGATTCTTCATACCAAAGGCTTCAGATTCTTGGATAGAGCTGCTATTGTTACACCTGATGATGAGGCTGAGAAAGTAGAGAGCGGATCGAAATACGATCCATGGAGGCTCTGCTCGGTGACTCAAGTCGAAGAAGTGAAATGTGTATTAAGACTCTTACCAATCTGGCTCTGCACCATCCTCTACTCTGTGGTTTTCACCCAAATGGCTTCACTGTTCGTTGTGCAAGGAGCAGCGATGAAGACAAACATCAAAAACTTCCGGATTCCAGCTTCAAGCATGTCTAGTTTCGACATTCTCAGTGTCGCCTTCTTCATCTTCGCATACAGGCGGTTTCTTGATCCACTCTTTGCAAGACTTAACAAAACAGAACGCAACAAAGGTCTCACTGAGCTTCAGAGGATGGGGATTGGGCTTGTGATTGCGATAATGGCGATGATTTCCGCAGGAATCGTAGAGATACACAGACTGAAAAATAAGGAACCGGAAAGTGCTACTTCGATCTCAAGCTCCAGCACTTTGAGCATTTTTTGGCAAGTACCTCAGTACATGTTGATAGGTGCATCAGAAGTGTTCATGTACGTTGGTCAACTCGAGTTCTTCAACAGCCAAGCACCAACCGGGCTAAAGAGCTTTGCAAGCGCGCTATGTATGGCTTCAATATCTCTTGGGAACTATGTAAGCAGTTTGTTAGTTTCCATTGTCATGAAGATCTCTACAACAGATGATGTGCATGGCTGGATTCCTGAAAATCTCAACAAAGGACACTTGGAGAGATTCTACTTCCTTTTAGCTGGTCTAACCGCTGCTGATTTCGTGGTTTACTTGATTTGTGCCAAATGGTACAAGTATATTAAATCTGAAGCAAGTTTCTCTGAGTCCGTAACTGAAGAGGAGGAAGTCTGA

Protein Analysis

589

Amino Acids

65.51

Weight (kDa)

6.11

Isoelectric Point (pI)

29.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 40 - 513 5.2e-11 Major Facilitator Superfamily
PTR2 PF00854 101 - 536 4e-87 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 775
AccBSI CCGCTC 1 cut(s) 948
AccII CGCG 3 cut(s) 470, 563, 1508
AccIII TCCGGA 1 cut(s) 1125
AciI CCGC 8 cut(s) 212, 530, 653, 689, 948, 1195, 1308, 1668
AclWI GGATC 6 cut(s) 12, 607, 645, 956, 958, 1199
AcoI YGGCCR 1 cut(s) 650
AcsI RAATTY 1 cut(s) 163
AcuI CTGAAG 3 cut(s) 871, 1244, 1746
AcyI GRCGYC 1 cut(s) 668
AfaI GTAC 5 cut(s) 725, 1404, 1412, 1445, 1709
AfiI CCNNNNNNNGG 2 cut(s) 93, 775
AflIII ACRYGT 1 cut(s) 1413
AgsI TTSAA 8 cut(s) 320, 380, 401, 545, 826, 1140, 1468, 1524
AjuI GAANNNNNNNTTGG 2 cut(s) 639, 671
Alw21I GWGCWC 1 cut(s) 813
Alw26I GTCTC 2 cut(s) 836, 1253
Alw44I GTGCAC 1 cut(s) 809
AlwI GGATC 6 cut(s) 12, 607, 645, 956, 958, 1199
AlwNI CAGNNNCTG 1 cut(s) 242
Ama87I CYCGRG 2 cut(s) 183, 1457
Aor13HI TCCGGA 1 cut(s) 1125
AoxI GGCC 1 cut(s) 650
ApaLI GTGCAC 1 cut(s) 809
ApeKI GCWGC 4 cut(s) 782, 905, 1097, 1670
ApoI RAATTY 1 cut(s) 163
AspLEI GCGC 2 cut(s) 1508, 1510
AsuC2I CCSGG 1 cut(s) 1486
AsuHPI GGTGA 2 cut(s) 994, 1054
AvaI CYCGRG 2 cut(s) 183, 1457
BaeGI GKGCMC 1 cut(s) 813
BbsI GAAGAC 1 cut(s) 1112
Bbv12I GWGCWC 1 cut(s) 813
BbvI GCAGC 4 cut(s) 769, 892, 1109, 1657
BccI CCATC 3 cut(s) 184, 1049, 1261
BceAI ACGGC 2 cut(s) 76, 394
BclI TGATCA 1 cut(s) 517
BcnI CCSGG 1 cut(s) 1486
BcoDI GTCTC 2 cut(s) 836, 1253
BfaI CTAG 5 cut(s) 116, 131, 741, 759, 1149
BglII AGATCT 1 cut(s) 1575
BisI GCNGC 6 cut(s) 213, 653, 783, 906, 1098, 1671
BlsI GCNGC 6 cut(s) 214, 654, 784, 907, 1099, 1672
Bme1390I CCNGG 1 cut(s) 1486
BmeT110I CYCGRG 2 cut(s) 183, 1457
BmiI GGNNCC 1 cut(s) 1347
BmrFI CCNGG 1 cut(s) 1486
BmsI GCATC 2 cut(s) 517, 1436
BoxI GACNNNNGTC 1 cut(s) 989
BpiI GAAGAC 1 cut(s) 1112
BpmI CTGGAG 2 cut(s) 876, 1360
BpuEI CTTGAG 3 cut(s) 21, 972, 1354
BpuMI CCSGG 1 cut(s) 1486
BsaHI GRCGYC 1 cut(s) 668
BsaI GGTCTC 1 cut(s) 1253
BsaJI CCNNGG 2 cut(s) 752, 965
BsaWI WCCGGW 2 cut(s) 1125, 1348
Bsc4I CCNNNNNNNGG 2 cut(s) 93, 775
Bse118I RCCGGY 1 cut(s) 86
Bse1I ACTGG 2 cut(s) 367, 859
BseAI TCCGGA 1 cut(s) 1125
BseDI CCNNGG 2 cut(s) 752, 965
BseGI GGATG 2 cut(s) 1041, 1272
BseLI CCNNNNNNNGG 2 cut(s) 93, 775
BseMII CTCAG 7 cut(s) 289, 831, 924, 1177, 1245, 1421, 1731
BseNI ACTGG 2 cut(s) 367, 859
BsePI GCGCGC 1 cut(s) 1506
BseSI GKGCMC 1 cut(s) 813
BseXI GCAGC 4 cut(s) 769, 892, 1109, 1657
BsgI GTGCAG 1 cut(s) 1021
Bsh1236I CGCG 3 cut(s) 470, 563, 1508
BshFI GGCC 1 cut(s) 652
BsiHKAI GWGCWC 1 cut(s) 813
BsiHKCI CYCGRG 2 cut(s) 183, 1457
BsiSI CCGG 4 cut(s) 87, 1126, 1349, 1485
BslFI GGGAC 2 cut(s) 207, 306
BslI CCNNNNNNNGG 2 cut(s) 93, 775
BsmAI GTCTC 2 cut(s) 836, 1253
BsmFI GGGAC 2 cut(s) 207, 306
BsnI GGCC 1 cut(s) 652
Bso31I GGTCTC 1 cut(s) 1253
BsoBI CYCGRG 2 cut(s) 183, 1457
Bsp1286I GDGCHC 1 cut(s) 813
Bsp13I TCCGGA 1 cut(s) 1125
Bsp19I CCATGG 1 cut(s) 965
BspACI CCGC 8 cut(s) 212, 530, 653, 689, 948, 1195, 1308, 1668
BspANI GGCC 1 cut(s) 652
BspCNI CTCAG 7 cut(s) 288, 832, 925, 1176, 1246, 1420, 1732
BspEI TCCGGA 1 cut(s) 1125
BspFNI CGCG 3 cut(s) 470, 563, 1508
BspHI TCATGA 1 cut(s) 1569
BspLI GGNNCC 1 cut(s) 1347
BspPI GGATC 6 cut(s) 12, 607, 645, 956, 958, 1199
BspQI GCTCTTC 1 cut(s) 611
BspTNI GGTCTC 1 cut(s) 1253
BsrBI CCGCTC 1 cut(s) 948
BsrFI RCCGGY 1 cut(s) 86
BsrI ACTGG 2 cut(s) 367, 859
BssAI RCCGGY 1 cut(s) 86
BssECI CCNNGG 2 cut(s) 752, 965
BssHII GCGCGC 1 cut(s) 1506
BssNI GRCGYC 1 cut(s) 668
BssT1I CCWWGG 2 cut(s) 752, 965
Bst4CI ACNGT 6 cut(s) 21, 44, 244, 439, 619, 1080
Bst6I CTCTTC 3 cut(s) 611, 813, 1749
BstACI GRCGYC 1 cut(s) 668
BstC8I GCNNGC 5 cut(s) 141, 676, 716, 1504, 1508
BstDEI CTNAG 8 cut(s) 275, 798, 840, 933, 1163, 1254, 1407, 1740
BstDSI CCRYGG 1 cut(s) 965
BstF5I GGATG 2 cut(s) 1041, 1272
BstFNI CGCG 3 cut(s) 470, 563, 1508
BstHHI GCGC 2 cut(s) 1508, 1510
BstMAI GTCTC 2 cut(s) 836, 1253
BstMWI GCNNNNNNNGC 8 cut(s) 77, 140, 212, 415, 680, 1295, 1386, 1503
BstNSI RCATGY 2 cut(s) 1147, 1417
BstPAI GACNNNNGTC 1 cut(s) 989
BstSCI CCNGG 1 cut(s) 1484
BstSLI GKGCMC 1 cut(s) 813
BstUI CGCG 3 cut(s) 470, 563, 1508
BstV1I GCAGC 4 cut(s) 769, 892, 1109, 1657
BstV2I GAAGAC 1 cut(s) 1112
BstX2I RGATCY 1 cut(s) 1575
BstYI RGATCY 1 cut(s) 1575
BsuRI GGCC 1 cut(s) 652
BtgI CCRYGG 1 cut(s) 965
BtgZI GCGATG 2 cut(s) 1115, 1313
BtsCI GGATG 2 cut(s) 1041, 1272
BtsI GCAGTG 1 cut(s) 99
BtsIMutI CAGTG 6 cut(s) 99, 283, 852, 1076, 1171, 1251
Cac8I GCNNGC 5 cut(s) 141, 676, 716, 1504, 1508
CaiI CAGNNNCTG 1 cut(s) 242
CciI TCATGA 1 cut(s) 1569
CfoI GCGC 2 cut(s) 1508, 1510
Cfr10I RCCGGY 1 cut(s) 86
CseI GACGC 1 cut(s) 657
Csp6I GTAC 5 cut(s) 724, 1403, 1411, 1444, 1708
CviAII CATG 7 cut(s) 815, 966, 1144, 1414, 1441, 1570, 1598
CviQI GTAC 5 cut(s) 724, 1403, 1411, 1444, 1708
DdeI CTNAG 8 cut(s) 275, 798, 840, 933, 1163, 1254, 1407, 1740
EaeI YGGCCR 1 cut(s) 650
Eam1104I CTCTTC 3 cut(s) 611, 813, 1749
EarI CTCTTC 3 cut(s) 611, 813, 1749
Eco130I CCWWGG 2 cut(s) 752, 965
Eco31I GGTCTC 1 cut(s) 1253
Eco57I CTGAAG 3 cut(s) 871, 1244, 1746
Eco88I CYCGRG 2 cut(s) 183, 1457
EcoT14I CCWWGG 2 cut(s) 752, 965
ErhI CCWWGG 2 cut(s) 752, 965
FaeI CATG 7 cut(s) 818, 969, 1147, 1417, 1444, 1573, 1601
FalI AAGNNNNNCTT 2 cut(s) 1345, 1377
FaqI GGGAC 2 cut(s) 207, 306
FatI CATG 7 cut(s) 814, 965, 1143, 1413, 1440, 1569, 1597
FauI CCCGC 1 cut(s) 682
FbaI TGATCA 1 cut(s) 517
Fnu4HI GCNGC 6 cut(s) 213, 653, 783, 906, 1098, 1671
FokI GGATG 2 cut(s) 1028, 1279
Fsp4HI GCNGC 6 cut(s) 213, 653, 783, 906, 1098, 1671
FspBI CTAG 5 cut(s) 116, 131, 741, 759, 1149
GlaI GCGC 2 cut(s) 1507, 1509
GluI GCNGC 6 cut(s) 213, 653, 783, 906, 1098, 1671
GsuI CTGGAG 2 cut(s) 876, 1360
HaeIII GGCC 1 cut(s) 652
HapII CCGG 4 cut(s) 87, 1126, 1349, 1485
HgaI GACGC 1 cut(s) 657
HhaI GCGC 2 cut(s) 1508, 1510
Hin1I GRCGYC 1 cut(s) 668
Hin1II CATG 7 cut(s) 818, 969, 1147, 1417, 1444, 1573, 1601
Hin6I GCGC 2 cut(s) 1506, 1508
HinP1I GCGC 2 cut(s) 1506, 1508
HincII GTYRAC 1 cut(s) 1454
HindII GTYRAC 1 cut(s) 1454
HpaII CCGG 4 cut(s) 87, 1126, 1349, 1485
HphI GGTGA 2 cut(s) 994, 1054
Hpy166II GTNNAC 3 cut(s) 811, 1454, 1687
Hpy188III TCNNGA 7 cut(s) 38, 706, 759, 1126, 1202, 1570, 1610
Hpy8I GTNNAC 3 cut(s) 811, 1454, 1687
Hpy99I CGWCG 1 cut(s) 430
HpyAV CCTTC 2 cut(s) 539, 1183
HpyCH4III ACNGT 6 cut(s) 21, 44, 244, 439, 619, 1080
HpyCH4IV ACGT 3 cut(s) 295, 428, 1446
HpyF10VI GCNNNNNNNGC 8 cut(s) 77, 140, 212, 415, 680, 1295, 1386, 1503
HpyF3I CTNAG 8 cut(s) 275, 798, 840, 933, 1163, 1254, 1407, 1740
HpySE526I ACGT 3 cut(s) 295, 428, 1446
Hsp92I GRCGYC 1 cut(s) 668
Hsp92II CATG 7 cut(s) 818, 969, 1147, 1417, 1444, 1573, 1601
HspAI GCGC 2 cut(s) 1506, 1508
Kpn2I TCCGGA 1 cut(s) 1125
Ksp22I TGATCA 1 cut(s) 517
LguI GCTCTTC 1 cut(s) 611
LmnI GCTCC 3 cut(s) 512, 1094, 1379
Lsp1109I GCAGC 4 cut(s) 769, 892, 1109, 1657
LweI GCATC 2 cut(s) 517, 1436
MaeI CTAG 5 cut(s) 116, 131, 741, 759, 1149
MaeII ACGT 3 cut(s) 295, 428, 1446
MaeIII GTNAC 8 cut(s) 56, 278, 296, 572, 626, 913, 982, 1747
MbiI CCGCTC 1 cut(s) 948
MflI RGATCY 1 cut(s) 1575
MhlI GDGCHC 1 cut(s) 813
MluCI AATT 1 cut(s) 163
MlyI GAGTC 7 cut(s) 175, 275, 757, 838, 979, 1011, 1751
MroI TCCGGA 1 cut(s) 1125
MseI TTAA 4 cut(s) 432, 1013, 1224, 1719
MslI CAYNNNNRTG 3 cut(s) 116, 1067, 1568
MspA1I CMGCKG 1 cut(s) 1670
MspI CCGG 4 cut(s) 87, 1126, 1349, 1485
MspR9I CCNGG 1 cut(s) 1486
MvnI CGCG 3 cut(s) 470, 563, 1508
MwoI GCNNNNNNNGC 8 cut(s) 77, 140, 212, 415, 680, 1295, 1386, 1503
NciI CCSGG 1 cut(s) 1486
NcoI CCATGG 1 cut(s) 965
NlaIII CATG 7 cut(s) 818, 969, 1147, 1417, 1444, 1573, 1601
NlaIV GGNNCC 1 cut(s) 1347
NmuCI GTSAC 3 cut(s) 56, 278, 982
NspI RCATGY 2 cut(s) 1147, 1417
PaeR7I CTCGAG 2 cut(s) 183, 1457
PagI TCATGA 1 cut(s) 1569
PauI GCGCGC 1 cut(s) 1506
PciI ACATGT 1 cut(s) 1413
PciSI GCTCTTC 1 cut(s) 611
PcsI WCGNNNNNNNCGW 1 cut(s) 560
PflMI CCANNNNNTGG 1 cut(s) 775
PkrI GCNGC 6 cut(s) 214, 654, 784, 907, 1099, 1672
PleI GAGTC 7 cut(s) 175, 275, 756, 838, 979, 1011, 1750
PpsI GAGTC 7 cut(s) 175, 275, 756, 838, 979, 1011, 1750
PscI ACATGT 1 cut(s) 1413
PshAI GACNNNNGTC 1 cut(s) 989
PspN4I GGNNCC 1 cut(s) 1347
PspXI VCTCGAGB 2 cut(s) 183, 1457
PstNI CAGNNNCTG 1 cut(s) 242
PsuI RGATCY 1 cut(s) 1575
PteI GCGCGC 1 cut(s) 1506
RsaI GTAC 5 cut(s) 725, 1404, 1412, 1445, 1709
RsaNI GTAC 5 cut(s) 724, 1403, 1411, 1444, 1708
RseI CAYNNNNRTG 3 cut(s) 116, 1067, 1568
SapI GCTCTTC 1 cut(s) 611
SaqAI TTAA 4 cut(s) 432, 1013, 1224, 1719
SatI GCNGC 6 cut(s) 213, 653, 783, 906, 1098, 1671
SchI GAGTC 7 cut(s) 175, 275, 757, 838, 979, 1011, 1751
ScrFI CCNGG 1 cut(s) 1486
SduI GDGCHC 1 cut(s) 813
SfaNI GCATC 2 cut(s) 517, 1436
Sfr274I CTCGAG 2 cut(s) 183, 1457
SlaI CTCGAG 2 cut(s) 183, 1457
SmiMI CAYNNNNRTG 3 cut(s) 116, 1067, 1568
SmlI CTYRAG 5 cut(s) 36, 183, 987, 1369, 1457
SmoI CTYRAG 5 cut(s) 36, 183, 987, 1369, 1457
Sse9I AATT 1 cut(s) 163
SsiI CCGC 8 cut(s) 212, 530, 653, 689, 948, 1195, 1308, 1668
SspMI CTAG 5 cut(s) 116, 131, 741, 759, 1149
StyD4I CCNGG 1 cut(s) 1484
StyI CCWWGG 2 cut(s) 752, 965
TaaI ACNGT 6 cut(s) 21, 44, 244, 439, 619, 1080
TaiI ACGT 3 cut(s) 298, 431, 1449
TaqI TCGA 8 cut(s) 184, 425, 554, 953, 993, 1155, 1364, 1458
TasI AATT 1 cut(s) 163
TatI WGTACW 1 cut(s) 1410
TauI GCSGC 2 cut(s) 215, 655
Tru1I TTAA 4 cut(s) 432, 1013, 1224, 1719
Tru9I TTAA 4 cut(s) 432, 1013, 1224, 1719
TscAI CASTG 6 cut(s) 106, 283, 859, 1083, 1171, 1258
TseFI GTSAC 3 cut(s) 56, 278, 982
TseI GCWGC 4 cut(s) 782, 905, 1097, 1670
Tsp45I GTSAC 3 cut(s) 56, 278, 982
TspDTI ATGAA 6 cut(s) 831, 863, 1118, 1168, 1429, 1586
TspGWI ACGGA 2 cut(s) 529, 1735
TspRI CASTG 6 cut(s) 106, 283, 859, 1083, 1171, 1258
Van91I CCANNNNNTGG 1 cut(s) 775
VneI GTGCAC 1 cut(s) 809
XapI RAATTY 1 cut(s) 163
XbaI TCTAGA 1 cut(s) 758
XceI RCATGY 2 cut(s) 1147, 1417
XhoI CTCGAG 2 cut(s) 183, 1457
XspI CTAG 5 cut(s) 116, 131, 741, 759, 1149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.