Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0002904

Physical Location & Seq

Genomic Coordinates Reverse (-)

5891671 .. 5897785

Gene Structure 6115 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g06610.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGGCTTGCTTAAATGTTTGCAAGGATCAGGGATATGCAGAAGAAAAGAACCAGAAGATAAAAGAAGTTTGTACACTCGACGGAACCATTGATTGGTATGGTCGCCCTGCTGTCCGAGGAAGAACTGGAACATGGGTTGCTGGAATTCTCATATTAGTAAATCAAGGGTTGGCAACATTGGCATTCTTTGGAGTAGGAGTGAACCTGGTATTGTTTTTGACAAGGGTGTTGGGTCAAGACAACGCAGAGGCTGCAAATAATGTCAGCAAATGGACTGGAACAGTTTACATATTCTCTCTTCTTGGTGCTCTCCTCAGTGACTCTTACTGGGGGAGGTACAAGACTTGTGCTATCTTTCAAGTTATTTTTGTCATTGGTTTGTCATTGTTATCGCTATCGACGTACATATTCTTACTCAAGCCTAAAGGCTGTGGTGATGAAAAGTCTCCCTGTGGAGACCACTCGACCTTTGAAATCGGATTGTTCTACATCTCTATATACCTTATCGCACTTGGAAATGGTGGTTACCAACCTACTATAGCTACATTTGGTGCGGACCAGTTTGACGTGGAGGACCCGAACGAAGGGCACTCAAAGATATCCTTCTTTAGCTTCTTCTACTTGGCTTTGAATCTTGGCTCTCTCTTTTCAAACACAATCTTGGGATATTTTGAAGATAAGGGAATATGGGCTCTAGGGTTTTGGGTATCTACTGGCTCTGCTGCCATGGCTTTGGTCTTGTTTCTATGTGGCACTCCAATGTACAGGCATTTCAAGCCTCAGGGAAACCCTCTCTCTAGGTTTTGTCGGGTGGTCGTAGCTGCAACAAGAAAATGGAAGGATGAGATGACACCAAGTGGGGAAGATTTGTACGAGGGAGAGGATGAGAATAAATGCTCTCAAAACGAGAGTAGGAAAATAGTTCACACCCACGGATTCAAATTCTTGGATAAAGCTGCAATCATCACACCAAAGGAGATGAACCAAATGGGCAAGGGGGCTCAAAATCCATGGCGCCTTTGCACAGTGACACAAGTAGAAGAAGTGAAATGCATACTTAGACTACTCCCAATCTGGCTGTGCACAATTCTCTACTCTGTAGTTTTTACTCAGATGGCATCACTCTTTGTAGAACAAGGTGCTGCAATGAAGACCACCATTTCAAGCTTTCACATTCCCCCAGCCAGCATGTCAAGCTTTGACATTCTCAGCGTAGCGGCTTTTATTTTCATTTACAGGCGAGTTCTTGACCCGCTTGTTGCTAGGCTGATGAAAAAGGGACTCACTGAGCTTCAAAGGATGGGAATTGGTCTTGTTATTGCAATCCTGGCAATGATTTCAGCAGGAGTCGTAGAGTTGTTCAGGTTAAAGTATGAGGTAAAAGACTGCAACACCGATTGCGAAACTCCAAGTTCATTGAGCATATTTTGGCAAGTTCCTCAGTATGTGCTTGTAGGAGCATCAGAAGTGTTCATGTATGTTGGTCAACTGGAGTTCTTCAACGGACAAGCACCTGATGGATTAAAGAGCTTTGGGAGTGCACTTTGCATGACTTCAATATCACTTGGAAACTATGTGAGTAGCTTACTTGTTACAGTTGTGATGAAGATTTCTACGAGGGATGGCATGCCTGGATGGATCCCTGGAAACCTAAACAAGGGCCATTTGGAAAGGTTCTACTTTCTCTTAGCAGCTTTGACAACAGGTGATCTTTTGGTCTACGTATTATGTGCAAAATGGTACAAGTATATCAAGTTCGAAGGAAAAGGTGGAAATGACAGTGGCAATATTGGGCAAGCTGAACTTAGAGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006820 GO:0007275 GO:0007568 GO:0008150 GO:0008324 GO:0008509 GO:0009987 GO:0010035 GO:0010038 GO:0010150 GO:0010167 GO:0015075 GO:0015077 GO:0015078 GO:0015079 GO:0015103 GO:0015112 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015386 GO:0015491 GO:0015672 GO:0015698 GO:0015706 GO:0016020 GO:0022804 GO:0022821 GO:0022857 GO:0022890 GO:0030001 GO:0032501 GO:0032502 GO:0034220 GO:0042221 GO:0042592 GO:0044464 GO:0046686 GO:0046873 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0071705 GO:0071804 GO:0071805 GO:0071944 GO:0090693 GO:0098655 GO:0098656 GO:0098660 GO:0098662 GO:0098771 GO:0099402 GO:0099516 GO:1901698 GO:1901700 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PTR2

Protein Analysis

605

Amino Acids

66.82

Weight (kDa)

7.79

Isoelectric Point (pI)

23.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002904)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21680
fragaria_vesca	FvH4_7g07900
malus_domestica	MD02G1228800.v1.1 MD07G1082700.v1.1
prunus_persica	Prupe.2G110400_v2.0.a1
pyrus_communis	pycom02g19760 pycom07g06610
rosa_chinensis	RchiOBHm_Chr1g0324671 RchiOBHm_Chr1g0341461 RchiOBHm_Chr1g0341491 RchiOBHm_Chr1g0341501
rosa_laevigata	RLG00000029091 RLG00000029095 RLG00000029096 RLG00000029100
rosa_multiflora	Rmu_sc0003672.1_g000005 Rmu_sc0004903.1_g000009 Rmu_sc0006027.1_g000013 Rmu_sc0014111.1_g000001 Rmu_ssc0000295.1_g000062
rosa_roxburghii	Rroxscaffold_4G00312080 Rroxscaffold_4G00312110 Rroxscaffold_4G00312170
rosa_rugosa	Rorug01G0156400.1 Rorug01G0156500.1
rosa_samantha	Rh1AG171000 Rh1BG139000 Rh1BG139200 Rh1BG139300 Rh1BG139400 Rh1CG159300 Rh1CG159500 Rh1DG171500 Rh1DG171600 Rh1DG171800
rosa_wichuraiana	Rw1G014260 Rw1G014280 Rw1G014310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1014
AccB7I	CCANNNNNTGG	1 cut(s)	93
AccI	GTMKAC	1 cut(s)	1719
AciI	CCGC	3 cut(s)	554, 1217, 1253
AclWI	GGATC	3 cut(s)	33, 1633, 1646
AcsI	RAATTY	2 cut(s)	144, 941
AcyI	GRCGYC	1 cut(s)	1015
AdeI	CACNNNGTG	1 cut(s)	857
AfaI	GTAC	6 cut(s)	73, 338, 404, 764, 872, 1742
AfiI	CCNNNNNNNGG	3 cut(s)	93, 584, 1657
AjiI	CACGTC	1 cut(s)	568
AjnI	CCWGG	4 cut(s)	204, 1326, 1630, 1642
AjuI	GAANNNNNNNTTGG	2 cut(s)	76, 108
Alw21I	GWGCWC	3 cut(s)	310, 1085, 1543
Alw26I	GTCTC	2 cut(s)	450, 450
Alw44I	GTGCAC	2 cut(s)	1081, 1539
AlwI	GGATC	3 cut(s)	33, 1633, 1646
AlwNI	CAGNNNCTG	1 cut(s)	251
AoxI	GGCC	1 cut(s)	1660
ApaLI	GTGCAC	2 cut(s)	1081, 1539
ApeKI	GCWGC	6 cut(s)	251, 722, 821, 956, 1142, 1691
ApoI	RAATTY	2 cut(s)	144, 941
AspLEI	GCGC	1 cut(s)	1017
AspS9I	GGNCC	3 cut(s)	556, 574, 1660
AsuHPI	GGTGA	2 cut(s)	446, 1718
AsuII	TTCGAA	1 cut(s)	1758
AvaII	GGWCC	2 cut(s)	556, 574
AxyI	CCTNAGG	1 cut(s)	780
BaeGI	GKGCMC	3 cut(s)	591, 1085, 1543
BamHI	GGATCC	1 cut(s)	1638
BanI	GGYRCC	1 cut(s)	1014
BanII	GRGCYC	2 cut(s)	694, 1003
BbsI	GAAGAC	1 cut(s)	1157
Bbv12I	GWGCWC	3 cut(s)	310, 1085, 1543
BbvI	GCAGC	6 cut(s)	238, 709, 808, 943, 1129, 1703
BccI	CCATC	5 cut(s)	1108, 1294, 1511, 1616, 1629
BciT130I	CCWGG	4 cut(s)	206, 1328, 1632, 1644
BcoDI	GTCTC	2 cut(s)	450, 450
BfaI	CTAG	3 cut(s)	695, 798, 1263
BfmI	CTRYAG	2 cut(s)	537, 1098
BfoI	RGCGCY	1 cut(s)	1018
BisI	GCNGC	7 cut(s)	252, 723, 822, 957, 1143, 1218, 1692
BlsI	GCNGC	7 cut(s)	253, 724, 823, 958, 1144, 1219, 1693
Bme1390I	CCNGG	4 cut(s)	206, 1328, 1632, 1644
Bme18I	GGWCC	2 cut(s)	556, 574
BmgBI	CACGTC	1 cut(s)	568
BmgT120I	GGNCC	3 cut(s)	556, 574, 1660
BmiI	GGNNCC	4 cut(s)	85, 576, 1016, 1640
BmrFI	CCNGG	4 cut(s)	206, 1328, 1632, 1644
BmrI	ACTGGG	1 cut(s)	337
BmsI	GCATC	2 cut(s)	1127, 1469
BmuI	ACTGGG	1 cut(s)	337
BpiI	GAAGAC	1 cut(s)	1157
BpmI	CTGGAG	1 cut(s)	1511
Bpu14I	TTCGAA	1 cut(s)	1758
BpuEI	CTTGAG	1 cut(s)	401
BsaAI	YACGTR	1 cut(s)	1723
BsaHI	GRCGYC	1 cut(s)	1015
BsaI	GGTCTC	1 cut(s)	450
BsaJI	CCNNGG	5 cut(s)	115, 726, 931, 1010, 1642
BsaXI	ACNNNNNCTCC	2 cut(s)	183, 213
Bsc4I	CCNNNNNNNGG	3 cut(s)	93, 584, 1657
Bse1I	ACTGG	6 cut(s)	130, 280, 332, 559, 718, 1494
Bse21I	CCTNAGG	1 cut(s)	780
Bse3DI	GCAATG	2 cut(s)	1152, 1338
BseBI	CCWGG	4 cut(s)	206, 1328, 1632, 1644
BseDI	CCNNGG	5 cut(s)	115, 726, 931, 1010, 1642
BseGI	GGATG	5 cut(s)	847, 889, 1305, 1627, 1640
BseLI	CCNNNNNNNGG	3 cut(s)	93, 584, 1657
BseMI	GCAATG	2 cut(s)	1152, 1338
BseMII	CTCAG	6 cut(s)	328, 794, 1124, 1222, 1278, 1454
BseNI	ACTGG	6 cut(s)	130, 280, 332, 559, 718, 1494
BseRI	GAGGAG	1 cut(s)	302
BseSI	GKGCMC	3 cut(s)	591, 1085, 1543
BseXI	GCAGC	6 cut(s)	238, 709, 808, 943, 1129, 1703
BseYI	CCCAGC	1 cut(s)	1180
BshFI	GGCC	1 cut(s)	1662
BshNI	GGYRCC	1 cut(s)	1014
BsiHKAI	GWGCWC	3 cut(s)	310, 1085, 1543
BslFI	GGGAC	1 cut(s)	1293
BslI	CCNNNNNNNGG	3 cut(s)	93, 584, 1657
BsmAI	GTCTC	2 cut(s)	450, 450
BsmFI	GGGAC	1 cut(s)	1293
BsmI	GAATGC	1 cut(s)	182
BsnI	GGCC	1 cut(s)	1662
Bso31I	GGTCTC	1 cut(s)	450
Bsp119I	TTCGAA	1 cut(s)	1758
Bsp1286I	GDGCHC	6 cut(s)	310, 591, 694, 1003, 1085, 1543
Bsp1407I	TGTACA	2 cut(s)	71, 762
Bsp143I	GATC	3 cut(s)	25, 1638, 1708
Bsp19I	CCATGG	2 cut(s)	726, 1010
BspACI	CCGC	3 cut(s)	554, 1217, 1253
BspANI	GGCC	1 cut(s)	1662
BspCNI	CTCAG	6 cut(s)	327, 793, 1123, 1221, 1279, 1453
BspLI	GGNNCC	4 cut(s)	85, 576, 1016, 1640
BspPI	GGATC	3 cut(s)	33, 1633, 1646
BspT104I	TTCGAA	1 cut(s)	1758
BspT107I	GGYRCC	1 cut(s)	1014
BspTNI	GGTCTC	1 cut(s)	450
BsrDI	GCAATG	2 cut(s)	1152, 1338
BsrGI	TGTACA	2 cut(s)	71, 762
BsrI	ACTGG	6 cut(s)	130, 280, 332, 559, 718, 1494
BssECI	CCNNGG	5 cut(s)	115, 726, 931, 1010, 1642
BssMI	GATC	3 cut(s)	25, 1638, 1708
BssNI	GRCGYC	1 cut(s)	1015
BssT1I	CCWWGG	2 cut(s)	726, 1010
Bst2UI	CCWGG	4 cut(s)	206, 1328, 1632, 1644
Bst4CI	ACNGT	4 cut(s)	283, 1027, 1597, 1781
Bst6I	CTCTTC	1 cut(s)	303
BstACI	GRCGYC	1 cut(s)	1015
BstAPI	GCANNNNNTGC	1 cut(s)	251
BstAUI	TGTACA	2 cut(s)	71, 762
BstBAI	YACGTR	1 cut(s)	1723
BstBI	TTCGAA	1 cut(s)	1758
BstC8I	GCNNGC	4 cut(s)	7, 1186, 1628, 1797
BstDEI	CTNAG	9 cut(s)	314, 780, 1058, 1110, 1208, 1287, 1440, 1687, 1805
BstDSI	CCRYGG	3 cut(s)	726, 931, 1010
BstEII	GGTNACC	1 cut(s)	524
BstENI	CCTNNNNNAGG	1 cut(s)	1655
BstF5I	GGATG	5 cut(s)	847, 889, 1305, 1627, 1640
BstH2I	RGCGCY	1 cut(s)	1018
BstHHI	GCGC	1 cut(s)	1017
BstKTI	GATC	3 cut(s)	28, 1641, 1711
BstMAI	GTCTC	2 cut(s)	450, 450
BstMBI	GATC	3 cut(s)	25, 1638, 1708
BstMWI	GCNNNNNNNGC	6 cut(s)	179, 251, 728, 775, 1194, 1328
BstNI	CCWGG	4 cut(s)	206, 1328, 1632, 1644
BstNSI	RCATGY	2 cut(s)	1192, 1630
BstPI	GGTNACC	1 cut(s)	524
BstSCI	CCNGG	4 cut(s)	204, 1326, 1630, 1642
BstSFI	CTRYAG	2 cut(s)	537, 1098
BstSLI	GKGCMC	3 cut(s)	591, 1085, 1543
BstSNI	TACGTA	1 cut(s)	1723
BstV1I	GCAGC	6 cut(s)	238, 709, 808, 943, 1129, 1703
BstV2I	GAAGAC	1 cut(s)	1157
BstX2I	RGATCY	1 cut(s)	1638
BstXI	CCANNNNNNTGG	1 cut(s)	733
BstYI	RGATCY	1 cut(s)	1638
Bsu36I	CCTNAGG	1 cut(s)	780
BsuRI	GGCC	1 cut(s)	1662
BtgI	CCRYGG	3 cut(s)	726, 931, 1010
BtrI	CACGTC	1 cut(s)	568
BtsCI	GGATG	5 cut(s)	847, 889, 1305, 1627, 1640
BtsIMutI	CAGTG	4 cut(s)	322, 1032, 1284, 1786
Cac8I	GCNNGC	4 cut(s)	7, 1186, 1628, 1797
CaiI	CAGNNNCTG	1 cut(s)	251
CfoI	GCGC	1 cut(s)	1017
Cfr13I	GGNCC	3 cut(s)	556, 574, 1660
CsiI	ACCWGGT	1 cut(s)	204
Csp6I	GTAC	6 cut(s)	72, 337, 403, 763, 871, 1741
CviAII	CATG	7 cut(s)	132, 727, 1011, 1189, 1474, 1549, 1627
CviQI	GTAC	6 cut(s)	72, 337, 403, 763, 871, 1741
DdeI	CTNAG	9 cut(s)	314, 780, 1058, 1110, 1208, 1287, 1440, 1687, 1805
DinI	GGCGCC	1 cut(s)	1016
DpnI	GATC	3 cut(s)	27, 1640, 1710
DpnII	GATC	3 cut(s)	25, 1638, 1708
DraIII	CACNNNGTG	1 cut(s)	857
Eam1104I	CTCTTC	1 cut(s)	303
EarI	CTCTTC	1 cut(s)	303
Eco105I	TACGTA	1 cut(s)	1723
Eco130I	CCWWGG	2 cut(s)	726, 1010
Eco24I	GRGCYC	2 cut(s)	694, 1003
Eco31I	GGTCTC	1 cut(s)	450
Eco32I	GATATC	1 cut(s)	600
Eco47I	GGWCC	2 cut(s)	556, 574
Eco81I	CCTNAGG	1 cut(s)	780
Eco91I	GGTNACC	1 cut(s)	524
EcoNI	CCTNNNNNAGG	1 cut(s)	1655
EcoO109I	RGGNCCY	1 cut(s)	574
EcoO65I	GGTNACC	1 cut(s)	524
EcoRI	GAATTC	1 cut(s)	144
EcoRII	CCWGG	4 cut(s)	204, 1326, 1630, 1642
EcoRV	GATATC	1 cut(s)	600
EcoT14I	CCWWGG	2 cut(s)	726, 1010
EcoT22I	ATGCAT	1 cut(s)	1055
EcoT38I	GRGCYC	2 cut(s)	694, 1003
EgeI	GGCGCC	1 cut(s)	1016
EheI	GGCGCC	1 cut(s)	1016
ErhI	CCWWGG	2 cut(s)	726, 1010
FaeI	CATG	7 cut(s)	135, 730, 1014, 1192, 1477, 1552, 1630
FalI	AAGNNNNNCTT	3 cut(s)	587, 619, 1788
FaqI	GGGAC	1 cut(s)	1293
FatI	CATG	7 cut(s)	131, 726, 1010, 1188, 1473, 1548, 1626
FauI	CCCGC	1 cut(s)	1260
FblI	GTMKAC	1 cut(s)	1719
Fnu4HI	GCNGC	7 cut(s)	252, 723, 822, 957, 1143, 1218, 1692
FokI	GGATG	5 cut(s)	854, 896, 1312, 1634, 1647
FriOI	GRGCYC	2 cut(s)	694, 1003
Fsp4HI	GCNGC	7 cut(s)	252, 723, 822, 957, 1143, 1218, 1692
FspBI	CTAG	3 cut(s)	695, 798, 1263
GlaI	GCGC	1 cut(s)	1016
GluI	GCNGC	7 cut(s)	252, 723, 822, 957, 1143, 1218, 1692
GsaI	CCCAGC	1 cut(s)	1184
GsuI	CTGGAG	1 cut(s)	1511
HaeII	RGCGCY	1 cut(s)	1018
HaeIII	GGCC	1 cut(s)	1662
HhaI	GCGC	1 cut(s)	1017
Hin1I	GRCGYC	1 cut(s)	1015
Hin1II	CATG	7 cut(s)	135, 730, 1014, 1192, 1477, 1552, 1630
Hin6I	GCGC	1 cut(s)	1015
HinP1I	GCGC	1 cut(s)	1015
HincII	GTYRAC	1 cut(s)	1487
HindII	GTYRAC	1 cut(s)	1487
HindIII	AAGCTT	2 cut(s)	1165, 1195
HinfI	GANTC	5 cut(s)	320, 631, 936, 1281, 1347
HphI	GGTGA	2 cut(s)	446, 1718
Hpy166II	GTNNAC	8 cut(s)	74, 202, 286, 925, 1083, 1487, 1541, 1720
Hpy188I	TCNGA	4 cut(s)	116, 479, 1113, 1465
Hpy188III	TCNNGA	2 cut(s)	236, 1247
Hpy8I	GTNNAC	8 cut(s)	74, 202, 286, 925, 1083, 1487, 1541, 1720
Hpy99I	CGWCG	2 cut(s)	83, 403
HpyAV	CCTTC	4 cut(s)	578, 613, 832, 1754
HpyCH4III	ACNGT	4 cut(s)	283, 1027, 1597, 1781
HpyCH4IV	ACGT	3 cut(s)	401, 567, 1722
HpyF10VI	GCNNNNNNNGC	6 cut(s)	179, 251, 728, 775, 1194, 1328
HpyF3I	CTNAG	9 cut(s)	314, 780, 1058, 1110, 1208, 1287, 1440, 1687, 1805
HpySE526I	ACGT	3 cut(s)	401, 567, 1722
Hsp92I	GRCGYC	1 cut(s)	1015
Hsp92II	CATG	7 cut(s)	135, 730, 1014, 1192, 1477, 1552, 1630
HspAI	GCGC	1 cut(s)	1015
KasI	GGCGCC	1 cut(s)	1014
Kzo9I	GATC	3 cut(s)	25, 1638, 1708
LmnI	GCTCC	1 cut(s)	1457
Lsp1109I	GCAGC	6 cut(s)	238, 709, 808, 943, 1129, 1703
LweI	GCATC	2 cut(s)	1127, 1469
MabI	ACCWGGT	1 cut(s)	204
MaeI	CTAG	3 cut(s)	695, 798, 1263
MaeII	ACGT	3 cut(s)	401, 567, 1722
MaeIII	GTNAC	4 cut(s)	317, 524, 1027, 1591
MalI	GATC	3 cut(s)	27, 1640, 1710
MboI	GATC	3 cut(s)	25, 1638, 1708
MflI	RGATCY	1 cut(s)	1638
MhlI	GDGCHC	6 cut(s)	310, 591, 694, 1003, 1085, 1543
MluCI	AATT	4 cut(s)	144, 941, 1086, 1305
Mly113I	GGCGCC	1 cut(s)	1015
MlyI	GAGTC	3 cut(s)	314, 1275, 1356
Mph1103I	ATGCAT	1 cut(s)	1055
MseI	TTAA	4 cut(s)	11, 1367, 1523, 1813
MslI	CAYNNNNRTG	1 cut(s)	758
MspR9I	CCNGG	4 cut(s)	206, 1328, 1632, 1644
Mva1269I	GAATGC	1 cut(s)	182
MvaI	CCWGG	4 cut(s)	206, 1328, 1632, 1644
MwoI	GCNNNNNNNGC	6 cut(s)	179, 251, 728, 775, 1194, 1328
NarI	GGCGCC	1 cut(s)	1015
NcoI	CCATGG	2 cut(s)	726, 1010
NdeII	GATC	3 cut(s)	25, 1638, 1708
NlaIII	CATG	7 cut(s)	135, 730, 1014, 1192, 1477, 1552, 1630
NlaIV	GGNNCC	4 cut(s)	85, 576, 1016, 1640
NmuCI	GTSAC	2 cut(s)	317, 1027
NsiI	ATGCAT	1 cut(s)	1055
NspI	RCATGY	2 cut(s)	1192, 1630
NspV	TTCGAA	1 cut(s)	1758
PaeI	GCATGC	1 cut(s)	1630
PcsI	WCGNNNNNNNCGW	1 cut(s)	398
PctI	GAATGC	1 cut(s)	182
PfeI	GAWTC	2 cut(s)	631, 936
PflMI	CCANNNNNTGG	1 cut(s)	93
PkrI	GCNGC	7 cut(s)	253, 724, 823, 958, 1144, 1219, 1693
PleI	GAGTC	3 cut(s)	314, 1275, 1355
PluTI	GGCGCC	1 cut(s)	1018
PpsI	GAGTC	3 cut(s)	314, 1275, 1355
Ppu21I	YACGTR	1 cut(s)	1723
PpuMI	RGGWCCY	1 cut(s)	574
Psp5II	RGGWCCY	1 cut(s)	574
Psp6I	CCWGG	4 cut(s)	204, 1326, 1630, 1642
PspEI	GGTNACC	1 cut(s)	524
PspFI	CCCAGC	1 cut(s)	1180
PspGI	CCWGG	4 cut(s)	204, 1326, 1630, 1642
PspN4I	GGNNCC	4 cut(s)	85, 576, 1016, 1640
PspPI	GGNCC	3 cut(s)	556, 574, 1660
PspPPI	RGGWCCY	1 cut(s)	574
PsrI	GAACNNNNNNTAC	2 cut(s)	1739, 1771
PstNI	CAGNNNCTG	1 cut(s)	251
PsuI	RGATCY	1 cut(s)	1638
RsaI	GTAC	6 cut(s)	73, 338, 404, 764, 872, 1742
RsaNI	GTAC	6 cut(s)	72, 337, 403, 763, 871, 1741
RseI	CAYNNNNRTG	1 cut(s)	758
SaqAI	TTAA	4 cut(s)	11, 1367, 1523, 1813
SatI	GCNGC	7 cut(s)	252, 723, 822, 957, 1143, 1218, 1692
Sau3AI	GATC	3 cut(s)	25, 1638, 1708
Sau96I	GGNCC	3 cut(s)	556, 574, 1660
SchI	GAGTC	3 cut(s)	314, 1275, 1356
ScrFI	CCNGG	4 cut(s)	206, 1328, 1632, 1644
SduI	GDGCHC	6 cut(s)	310, 591, 694, 1003, 1085, 1543
SexAI	ACCWGGT	1 cut(s)	204
SfaNI	GCATC	2 cut(s)	1127, 1469
SfcI	CTRYAG	2 cut(s)	537, 1098
SfoI	GGCGCC	1 cut(s)	1016
SfuI	TTCGAA	1 cut(s)	1758
SinI	GGWCC	2 cut(s)	556, 574
SmiMI	CAYNNNNRTG	1 cut(s)	758
SmlI	CTYRAG	1 cut(s)	416
SmoI	CTYRAG	1 cut(s)	416
SnaBI	TACGTA	1 cut(s)	1723
SphI	GCATGC	1 cut(s)	1630
Sse9I	AATT	4 cut(s)	144, 941, 1086, 1305
SsiI	CCGC	3 cut(s)	554, 1217, 1253
SspDI	GGCGCC	1 cut(s)	1014
SspI	AATATT	1 cut(s)	1789
SspMI	CTAG	3 cut(s)	695, 798, 1263
StyD4I	CCNGG	4 cut(s)	204, 1326, 1630, 1642
StyI	CCWWGG	2 cut(s)	726, 1010
TaaI	ACNGT	4 cut(s)	283, 1027, 1597, 1781
TaiI	ACGT	3 cut(s)	404, 570, 1725
TaqI	TCGA	4 cut(s)	78, 398, 464, 1758
TasI	AATT	4 cut(s)	144, 941, 1086, 1305
TatI	WGTACW	2 cut(s)	71, 762
TauI	GCSGC	1 cut(s)	1220
TfiI	GAWTC	2 cut(s)	631, 936
Tru1I	TTAA	4 cut(s)	11, 1367, 1523, 1813
Tru9I	TTAA	4 cut(s)	11, 1367, 1523, 1813
TscAI	CASTG	4 cut(s)	322, 1032, 1291, 1786
TseFI	GTSAC	2 cut(s)	317, 1027
TseI	GCWGC	6 cut(s)	251, 722, 821, 956, 1142, 1691
Tsp45I	GTSAC	2 cut(s)	317, 1027
TspDTI	ATGAA	8 cut(s)	453, 995, 1163, 1219, 1286, 1404, 1462, 1619
TspGWI	ACGGA	3 cut(s)	96, 948, 1518
TspRI	CASTG	4 cut(s)	322, 1032, 1291, 1786
Van91I	CCANNNNNTGG	1 cut(s)	93
VneI	GTGCAC	2 cut(s)	1081, 1539
VpaK11BI	GGWCC	2 cut(s)	556, 574
XagI	CCTNNNNNAGG	1 cut(s)	1655
XapI	RAATTY	2 cut(s)	144, 941
XceI	RCATGY	2 cut(s)	1192, 1630
XmiI	GTMKAC	1 cut(s)	1719
XspI	CTAG	3 cut(s)	695, 798, 1263
Zsp2I	ATGCAT	1 cut(s)	1055

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.