AT4G24160

Alpha/beta hydrolase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
12539656 .. 12542489
2834 bp
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UTR
Exon/CDS
Intron
AT4G24160.2

Sequence Viewer

Length: 1257 bp
ATGAACTTGAGCCGTTTTGCTTCGAGATTAAGAATGGCGGAAGAAATCTCAAAGACGAAGGTGGGATCTTCTTCTACTGCTTCGGTGGCTGATTCATCTGCTGCTGCGTCGGCTGCAACGAATGCGGCCAAATCAAGATGGAAAATTTTGTGGCCTAATTCGCTCCGGTGGATTCCTACGTCCACCGATTACATCATCGCCGCCGAGAAACGTCTTCTCTCCATCCTCAAGACGCCTTATGTACAAGAGCAAGTCAGTATTGGTTCAGGACCACCAGGTTCTAAAATCAGGTGGTTTAGGTCTACGAGCAATGAGTCACGTTACATCAACACTGTTACATTTGATGCCAAGGAGGGAGCTCCTACACTCGTCATGGTTCATGGTTATGGTGCTTCTCAAGGGTTTTTCTTCCGTAATTTTGATGCTCTTGCCAGTCGATTTAGAGTGATCGCTATTGATCAACTTGGGTGGGGTGGTTCAAGTAGGCCTGATTTTACATGTAGAAGCACAGAAGAAACTGAGGCATGGTTTATCGACTCCTTTGAGGAATGGCGTAAAGCCCAGAATCTCAGTAACTTTATTCTATTAGGACATTCTTTTGGAGGCTATGTTGCTGCTAAATACGCGCTTAAGCATCCTGAACATGTTCAACACTTAATTCTGGTGGGATCTGCTGGGTTCTCAGCAGAAGCAGATGCCAAATCAGAATGGCTCACTAAATTTAGAGCAACATGGAAAGGTGCAGTCCTAAATCATTTATGGGAGTCAAATTTCACTCCTCAGAAGCTGGTTAGAGGATTAGGTCCTTGGGGTCCAGGTCTTGTAAATCGGTATACAACTGCAAGATTTGGTGCACATTCGGAGGGAACTGGGCTAACAGAAGAGGAAGCCAAATTGCTAACCGATTATGTGTACCATACTTTGGCTGCAAAGGCTAGTGGAGAGTTATGCTTGAAATACATCTTCTCATTTGGAGCATTTGCTAGGAAGCCCCTCTTACAAAGTGCATCAGAGTGGAAAGTGCCAACAACGTTTATCTATGGAATGAATGATTGGATGAACTATCAAGGTGCGGTGGAAGCGAGGAAATCCATGAAGGTCCCTTGCGAAATCATTCGGGTTCCACAGGGTGGTCATTTTGTGTTCATAGACAACCCAATTGGTTTTCATTCTGCAGTGCTTTATGCTTGCCGCAAGTTTATATCTCAAGACTCCTCTCATGATCAACAACTCCTAGATGGTCTACGATTGGTTTAG

Protein Analysis

418

Amino Acids

46.53

Weight (kDa)

9.32

Isoelectric Point (pI)

39.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 121 - 259 1.5e-23 alpha/beta hydrolase fold
Hydrolase_4 PF12146 122 - 255 1.2e-16 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 123 - 264 1.3e-15 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 922, 1130
AccI GTMKAC 3 cut(s) 302, 833, 1243
AccII CGCG 1 cut(s) 626
AciI CCGC 5 cut(s) 38, 125, 201, 1073, 1192
AclI AACGTT 1 cut(s) 1031
AclWI GGATC 2 cut(s) 73, 676
AcoI YGGCCR 1 cut(s) 126
AcsI RAATTY 3 cut(s) 144, 719, 769
AcyI GRCGYC 1 cut(s) 233
AdeI CACNNNGTG 1 cut(s) 1130
AfaI GTAC 2 cut(s) 243, 914
AfiI CCNNNNNNNGG 2 cut(s) 922, 1130
AflII CTTAAG 1 cut(s) 629
AflIII ACRYGT 2 cut(s) 497, 643
AgsI TTSAA 3 cut(s) 480, 650, 955
AjnI CCWGG 2 cut(s) 274, 814
AjuI GAANNNNNNNTTGG 2 cut(s) 1036, 1068
AluBI AGCT 2 cut(s) 359, 787
AluI AGCT 2 cut(s) 359, 787
Alw21I GWGCWC 2 cut(s) 361, 856
Alw44I GTGCAC 1 cut(s) 852
AlwI GGATC 2 cut(s) 73, 676
AlwNI CAGNNNCTG 1 cut(s) 787
AoxI GGCC 3 cut(s) 126, 152, 485
ApaLI GTGCAC 1 cut(s) 852
ApeKI GCWGC 5 cut(s) 101, 104, 113, 614, 926
ApoI RAATTY 3 cut(s) 144, 719, 769
Asp700I GAANNNNTTC 2 cut(s) 645, 1113
AspLEI GCGC 1 cut(s) 628
AspS9I GGNCC 4 cut(s) 269, 803, 812, 1099
AvaII GGWCC 4 cut(s) 269, 803, 812, 1099
BaeGI GKGCMC 1 cut(s) 856
BanII GRGCYC 1 cut(s) 361
BbsI GAAGAC 1 cut(s) 206
Bbv12I GWGCWC 2 cut(s) 361, 856
BbvI GCAGC 5 cut(s) 88, 91, 100, 601, 913
BccI CCATC 3 cut(s) 132, 230, 1232
BciT130I CCWGG 2 cut(s) 276, 816
BclI TGATCA 2 cut(s) 457, 1222
BfaI CTAG 3 cut(s) 936, 984, 1235
BfmI CTRYAG 1 cut(s) 1173
BfrI CTTAAG 1 cut(s) 629
BisI GCNGC 8 cut(s) 102, 105, 114, 126, 201, 615, 927, 1192
BlsI GCNGC 8 cut(s) 103, 106, 115, 127, 202, 616, 928, 1193
Bme1390I CCNGG 2 cut(s) 276, 816
Bme18I GGWCC 4 cut(s) 269, 803, 812, 1099
BmgT120I GGNCC 4 cut(s) 269, 803, 812, 1099
BmiI GGNNCC 3 cut(s) 813, 1101, 1122
BmrFI CCNGG 2 cut(s) 276, 816
BmrI ACTGGG 1 cut(s) 879
BmsI GCATC 5 cut(s) 334, 412, 643, 685, 1016
BmuI ACTGGG 1 cut(s) 879
BpiI GAAGAC 1 cut(s) 206
BpuEI CTTGAG 4 cut(s) 28, 212, 381, 1191
BsaHI GRCGYC 1 cut(s) 233
BsaJI CCNNGG 2 cut(s) 348, 806
BsaWI WCCGGW 1 cut(s) 165
BsaXI ACNNNNNCTCC 2 cut(s) 594, 624
Bsc4I CCNNNNNNNGG 2 cut(s) 922, 1130
Bse1I ACTGG 2 cut(s) 432, 874
Bse3DI GCAATG 1 cut(s) 316
BseBI CCWGG 2 cut(s) 276, 816
BseDI CCNNGG 2 cut(s) 348, 806
BseGI GGATG 3 cut(s) 222, 634, 1062
BseLI CCNNNNNNNGG 2 cut(s) 922, 1130
BseMI GCAATG 1 cut(s) 316
BseMII CTCAG 4 cut(s) 510, 583, 696, 794
BseNI ACTGG 2 cut(s) 432, 874
BseRI GAGGAG 2 cut(s) 768, 1204
BseSI GKGCMC 1 cut(s) 856
BseXI GCAGC 5 cut(s) 88, 91, 100, 601, 913
BseYI CCCAGC 1 cut(s) 674
BsgI GTGCAG 1 cut(s) 762
Bsh1236I CGCG 1 cut(s) 626
BshFI GGCC 3 cut(s) 128, 154, 487
BsiHKAI GWGCWC 2 cut(s) 361, 856
BsiSI CCGG 1 cut(s) 166
BslFI GGGAC 1 cut(s) 1085
BslI CCNNNNNNNGG 2 cut(s) 922, 1130
BsmFI GGGAC 1 cut(s) 1085
BsmI GAATGC 1 cut(s) 127
BsnI GGCC 3 cut(s) 128, 154, 487
Bsp1286I GDGCHC 2 cut(s) 361, 856
Bsp1407I TGTACA 1 cut(s) 241
Bsp143I GATC 5 cut(s) 65, 447, 457, 668, 1222
BspACI CCGC 5 cut(s) 38, 125, 201, 1073, 1192
BspANI GGCC 3 cut(s) 128, 154, 487
BspCNI CTCAG 4 cut(s) 511, 582, 695, 793
BspFNI CGCG 1 cut(s) 626
BspHI TCATGA 1 cut(s) 1219
BspLI GGNNCC 3 cut(s) 813, 1101, 1122
BspMAI CTGCAG 1 cut(s) 1177
BspPI GGATC 2 cut(s) 73, 676
BspTI CTTAAG 1 cut(s) 629
BsrDI GCAATG 1 cut(s) 316
BsrGI TGTACA 1 cut(s) 241
BsrI ACTGG 2 cut(s) 432, 874
BssECI CCNNGG 2 cut(s) 348, 806
BssMI GATC 5 cut(s) 65, 447, 457, 668, 1222
BssNAI GTATAC 1 cut(s) 834
BssNI GRCGYC 1 cut(s) 233
BssT1I CCWWGG 2 cut(s) 348, 806
Bst1107I GTATAC 1 cut(s) 834
Bst2UI CCWGG 2 cut(s) 276, 816
Bst4CI ACNGT 1 cut(s) 334
Bst6I CTCTTC 1 cut(s) 876
BstACI GRCGYC 1 cut(s) 233
BstAFI CTTAAG 1 cut(s) 629
BstAPI GCANNNNNTGC 1 cut(s) 122
BstAUI TGTACA 1 cut(s) 241
BstC8I GCNNGC 1 cut(s) 1189
BstDEI CTNAG 4 cut(s) 519, 569, 682, 780
BstF5I GGATG 3 cut(s) 222, 634, 1062
BstFNI CGCG 1 cut(s) 626
BstHHI GCGC 1 cut(s) 628
BstKTI GATC 5 cut(s) 68, 450, 460, 671, 1225
BstMBI GATC 5 cut(s) 65, 447, 457, 668, 1222
BstMWI GCNNNNNNNGC 8 cut(s) 86, 110, 113, 122, 160, 623, 932, 1079
BstNI CCWGG 2 cut(s) 276, 816
BstNSI RCATGY 2 cut(s) 501, 647
BstSCI CCNGG 2 cut(s) 274, 814
BstSFI CTRYAG 1 cut(s) 1173
BstSLI GKGCMC 1 cut(s) 856
BstUI CGCG 1 cut(s) 626
BstV1I GCAGC 5 cut(s) 88, 91, 100, 601, 913
BstV2I GAAGAC 1 cut(s) 206
BstX2I RGATCY 2 cut(s) 65, 668
BstYI RGATCY 2 cut(s) 65, 668
BstZ17I GTATAC 1 cut(s) 834
BsuRI GGCC 3 cut(s) 128, 154, 487
BtgZI GCGATG 1 cut(s) 181
BtsCI GGATG 3 cut(s) 222, 634, 1062
BtsI GCAGTG 1 cut(s) 1182
BtsIMutI CAGTG 2 cut(s) 330, 1182
Cac8I GCNNGC 1 cut(s) 1189
CaiI CAGNNNCTG 1 cut(s) 787
CciI TCATGA 1 cut(s) 1219
CfoI GCGC 1 cut(s) 628
Cfr13I GGNCC 4 cut(s) 269, 803, 812, 1099
CseI GACGC 2 cut(s) 96, 241
CsiI ACCWGGT 1 cut(s) 274
Csp6I GTAC 2 cut(s) 242, 913
CspCI CAANNNNNGTGG 2 cut(s) 449, 484
CviAII CATG 8 cut(s) 373, 380, 498, 525, 644, 732, 1093, 1220
CviQI GTAC 2 cut(s) 242, 913
DdeI CTNAG 4 cut(s) 519, 569, 682, 780
DpnI GATC 5 cut(s) 67, 449, 459, 670, 1224
DpnII GATC 5 cut(s) 65, 447, 457, 668, 1222
DraIII CACNNNGTG 1 cut(s) 1130
EaeI YGGCCR 1 cut(s) 126
Eam1104I CTCTTC 1 cut(s) 876
EarI CTCTTC 1 cut(s) 876
EciI GGCGGA 1 cut(s) 53
Ecl136II GAGCTC 1 cut(s) 359
Eco130I CCWWGG 2 cut(s) 348, 806
Eco147I AGGCCT 1 cut(s) 487
Eco24I GRGCYC 1 cut(s) 361
Eco47I GGWCC 4 cut(s) 269, 803, 812, 1099
Eco53kI GAGCTC 1 cut(s) 359
EcoICRI GAGCTC 1 cut(s) 359
EcoO109I RGGNCCY 2 cut(s) 803, 1099
EcoRII CCWGG 2 cut(s) 274, 814
EcoT14I CCWWGG 2 cut(s) 348, 806
EcoT38I GRGCYC 1 cut(s) 361
ErhI CCWWGG 2 cut(s) 348, 806
FaeI CATG 8 cut(s) 376, 383, 501, 528, 647, 735, 1096, 1223
FalI AAGNNNNNCTT 2 cut(s) 980, 1012
FaqI GGGAC 1 cut(s) 1085
FatI CATG 8 cut(s) 372, 379, 497, 524, 643, 731, 1092, 1219
FbaI TGATCA 2 cut(s) 457, 1222
FblI GTMKAC 3 cut(s) 302, 833, 1243
Fnu4HI GCNGC 8 cut(s) 102, 105, 114, 126, 201, 615, 927, 1192
FokI GGATG 3 cut(s) 209, 621, 1069
FriOI GRGCYC 1 cut(s) 361
Fsp4HI GCNGC 8 cut(s) 102, 105, 114, 126, 201, 615, 927, 1192
FspBI CTAG 3 cut(s) 936, 984, 1235
GlaI GCGC 1 cut(s) 627
GluI GCNGC 8 cut(s) 102, 105, 114, 126, 201, 615, 927, 1192
GsaI CCCAGC 1 cut(s) 678
HaeIII GGCC 3 cut(s) 128, 154, 487
HapII CCGG 1 cut(s) 166
HgaI GACGC 2 cut(s) 96, 241
HhaI GCGC 1 cut(s) 628
Hin1I GRCGYC 1 cut(s) 233
Hin1II CATG 8 cut(s) 376, 383, 501, 528, 647, 735, 1096, 1223
Hin6I GCGC 1 cut(s) 626
HinP1I GCGC 1 cut(s) 626
HinfI GANTC 7 cut(s) 92, 172, 314, 536, 565, 764, 1211
HpaII CCGG 1 cut(s) 166
Hpy166II GTNNAC 6 cut(s) 183, 303, 834, 854, 913, 1244
Hpy188I TCNGA 4 cut(s) 706, 783, 862, 1012
Hpy188III TCNNGA 7 cut(s) 24, 135, 229, 267, 638, 1208, 1220
Hpy8I GTNNAC 6 cut(s) 183, 303, 834, 854, 913, 1244
Hpy99I CGWCG 1 cut(s) 112
HpyAV CCTTC 2 cut(s) 52, 1090
HpyCH4III ACNGT 1 cut(s) 334
HpyCH4IV ACGT 4 cut(s) 179, 211, 319, 1031
HpyCH4V TGCA 7 cut(s) 116, 743, 842, 854, 929, 1007, 1175
HpyF10VI GCNNNNNNNGC 8 cut(s) 86, 110, 113, 122, 160, 623, 932, 1079
HpyF3I CTNAG 4 cut(s) 519, 569, 682, 780
HpySE526I ACGT 4 cut(s) 179, 211, 319, 1031
Hsp92I GRCGYC 1 cut(s) 233
Hsp92II CATG 8 cut(s) 376, 383, 501, 528, 647, 735, 1096, 1223
HspAI GCGC 1 cut(s) 626
Ksp22I TGATCA 2 cut(s) 457, 1222
Kzo9I GATC 5 cut(s) 65, 447, 457, 668, 1222
LmnI GCTCC 4 cut(s) 168, 356, 364, 974
Lsp1109I GCAGC 5 cut(s) 88, 91, 100, 601, 913
LweI GCATC 5 cut(s) 334, 412, 643, 685, 1016
MabI ACCWGGT 1 cut(s) 274
MaeI CTAG 3 cut(s) 936, 984, 1235
MaeII ACGT 4 cut(s) 179, 211, 319, 1031
MaeIII GTNAC 4 cut(s) 315, 320, 334, 572
MalI GATC 5 cut(s) 67, 449, 459, 670, 1224
MboI GATC 5 cut(s) 65, 447, 457, 668, 1222
MboII GAAGA 8 cut(s) 53, 60, 63, 206, 400, 524, 893, 955
MfeI CAATTG 1 cut(s) 1158
MflI RGATCY 2 cut(s) 65, 668
MhlI GDGCHC 2 cut(s) 361, 856
MluCI AATT 8 cut(s) 144, 157, 415, 657, 719, 769, 893, 1158
MlyI GAGTC 4 cut(s) 323, 530, 773, 1205
MroXI GAANNNNTTC 2 cut(s) 645, 1113
MseI TTAA 3 cut(s) 29, 630, 656
MslI CAYNNNNRTG 2 cut(s) 384, 1012
MspCI CTTAAG 1 cut(s) 629
MspI CCGG 1 cut(s) 166
MspR9I CCNGG 2 cut(s) 276, 816
MunI CAATTG 1 cut(s) 1158
Mva1269I GAATGC 1 cut(s) 127
MvaI CCWGG 2 cut(s) 276, 816
MvnI CGCG 1 cut(s) 626
MwoI GCNNNNNNNGC 8 cut(s) 86, 110, 113, 122, 160, 623, 932, 1079
NdeII GATC 5 cut(s) 65, 447, 457, 668, 1222
NlaIII CATG 8 cut(s) 376, 383, 501, 528, 647, 735, 1096, 1223
NlaIV GGNNCC 3 cut(s) 813, 1101, 1122
NmeAIII GCCGAG 1 cut(s) 229
NmuCI GTSAC 1 cut(s) 315
NspI RCATGY 2 cut(s) 501, 647
PagI TCATGA 1 cut(s) 1219
PceI AGGCCT 1 cut(s) 487
PciI ACATGT 2 cut(s) 497, 643
PcsI WCGNNNNNNNCGW 1 cut(s) 116
PctI GAATGC 1 cut(s) 127
PdmI GAANNNNTTC 2 cut(s) 645, 1113
PfeI GAWTC 3 cut(s) 92, 172, 565
PflMI CCANNNNNTGG 2 cut(s) 922, 1130
PkrI GCNGC 8 cut(s) 103, 106, 115, 127, 202, 616, 928, 1193
PleI GAGTC 4 cut(s) 322, 530, 772, 1205
PpsI GAGTC 4 cut(s) 322, 530, 772, 1205
PpuMI RGGWCCY 2 cut(s) 803, 1099
PscI ACATGT 2 cut(s) 497, 643
Psp124BI GAGCTC 1 cut(s) 361
Psp1406I AACGTT 1 cut(s) 1031
Psp5II RGGWCCY 2 cut(s) 803, 1099
Psp6I CCWGG 2 cut(s) 274, 814
PspFI CCCAGC 1 cut(s) 674
PspGI CCWGG 2 cut(s) 274, 814
PspN4I GGNNCC 3 cut(s) 813, 1101, 1122
PspPI GGNCC 4 cut(s) 269, 803, 812, 1099
PspPPI RGGWCCY 2 cut(s) 803, 1099
PstI CTGCAG 1 cut(s) 1177
PstNI CAGNNNCTG 1 cut(s) 787
PsuI RGATCY 2 cut(s) 65, 668
RsaI GTAC 2 cut(s) 243, 914
RsaNI GTAC 2 cut(s) 242, 913
RseI CAYNNNNRTG 2 cut(s) 384, 1012
SacI GAGCTC 1 cut(s) 361
SaqAI TTAA 3 cut(s) 29, 630, 656
SatI GCNGC 8 cut(s) 102, 105, 114, 126, 201, 615, 927, 1192
Sau3AI GATC 5 cut(s) 65, 447, 457, 668, 1222
Sau96I GGNCC 4 cut(s) 269, 803, 812, 1099
SchI GAGTC 4 cut(s) 323, 530, 773, 1205
ScrFI CCNGG 2 cut(s) 276, 816
SduI GDGCHC 2 cut(s) 361, 856
SexAI ACCWGGT 1 cut(s) 274
SfaNI GCATC 5 cut(s) 334, 412, 643, 685, 1016
SfcI CTRYAG 1 cut(s) 1173
SinI GGWCC 4 cut(s) 269, 803, 812, 1099
SmiMI CAYNNNNRTG 2 cut(s) 384, 1012
SmlI CTYRAG 5 cut(s) 7, 227, 396, 629, 1206
SmoI CTYRAG 5 cut(s) 7, 227, 396, 629, 1206
Sse9I AATT 8 cut(s) 144, 157, 415, 657, 719, 769, 893, 1158
SseBI AGGCCT 1 cut(s) 487
SsiI CCGC 5 cut(s) 38, 125, 201, 1073, 1192
SspMI CTAG 3 cut(s) 936, 984, 1235
SstI GAGCTC 1 cut(s) 361
StuI AGGCCT 1 cut(s) 487
StyD4I CCNGG 2 cut(s) 274, 814
StyI CCWWGG 2 cut(s) 348, 806
TaaI ACNGT 1 cut(s) 334
TaiI ACGT 4 cut(s) 182, 214, 322, 1034
TaqI TCGA 3 cut(s) 23, 436, 534
TasI AATT 8 cut(s) 144, 157, 415, 657, 719, 769, 893, 1158
TatI WGTACW 1 cut(s) 241
TauI GCSGC 3 cut(s) 128, 203, 1194
TfiI GAWTC 3 cut(s) 92, 172, 565
Tru1I TTAA 3 cut(s) 29, 630, 656
Tru9I TTAA 3 cut(s) 29, 630, 656
TscAI CASTG 2 cut(s) 337, 1182
TseFI GTSAC 1 cut(s) 315
TseI GCWGC 5 cut(s) 101, 104, 113, 614, 926
Tsp45I GTSAC 1 cut(s) 315
TspDTI ATGAA 8 cut(s) 17, 84, 368, 1061, 1073, 1109, 1135, 1157
TspGWI ACGGA 1 cut(s) 401
TspRI CASTG 2 cut(s) 337, 1182
Van91I CCANNNNNTGG 2 cut(s) 922, 1130
Vha464I CTTAAG 1 cut(s) 629
VneI GTGCAC 1 cut(s) 852
VpaK11BI GGWCC 4 cut(s) 269, 803, 812, 1099
XapI RAATTY 3 cut(s) 144, 719, 769
XceI RCATGY 2 cut(s) 501, 647
XmiI GTMKAC 3 cut(s) 302, 833, 1243
XmnI GAANNNNTTC 2 cut(s) 645, 1113
XspI CTAG 3 cut(s) 936, 984, 1235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.