RH6DG425400

Abhydrolase domain-containing protein

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG425400.1

Sequence Viewer

Length: 1227 bp
ATGAACCTGCGTAGACTCTCGTCCAGAATGGCCGAAGAAATCAGTAGGTCCGCCGCCGCCGAGCTCCGACCCTCTGCTTCCACCGCCACCGCCACCGCCACAAAGGCAACGTCAAAATCGCTCTGGCCCTCCCTCCTCCGTTGGATCCCCACCTCCACCGATCACATCATCGCCGCCGAGAAGCGCCTCCTCTCTCTTGTCGCGACTCCATATGTTCAGGAGCGGGTGAATATTGGATCCGGCCCGCCCGGGTCGAAGGTGAGGTGGTTTCGGTCGGCAAGCAATGAGGAAAGGTTTATCAACACGGTTACTTTTGACAGCAAAGAGGATTCTCCTACTCTTGTAATGGTTCACGGCTACGGTCCTTCTCAAGGTTTCTTCTTTAGAAATTTTGATGCGCTTGCAAGTCGGTTCAGGGTCATTGCTATTGATCAACTTGGCTGGGGTGGATCAAGCAGACCTGATTTTACATGCAAAAGCACTGAAGAAACCGAAGCATGGTTTATTGATTCTTTGGAAGAATGGCGGAAAGCCAAAAATCTCAGCAACTTTATATTACTTGGACATTCATTTGGTGGGTATGTTGCAGCTAAGTATGCGCTAAAGCATCCGGAGCACATTAAGCATTTAGTTTTAGTGGGTCCTGTTGGGTTCTCGTCAGCGGAAGATGCAAGGAATGAGCGGATTATGCAGTTTAAAACAACATGGAAAGGAGCAATTATTAACCATTTATGGGAGTCTAATTTTACTCCTCAGAAGCTAATCAGAGGGTTAGGGCCTTGGGGTCCAAAGATTGTTCGGGGTTACACAAATACTAGATTTGGTGCTCGTACAGCAGGGACCACCCTAAATGAACATGAATCACAACTGCTAACAGATTACGTGTACCATACTTTAGCTGCCAAAGCAAGTGGAGAATTGTGCTTGAAATATATATTTTCTTTCGGAGCGTTTGCTCGGAAGCCTCTTCTTCAGAGTGCATCAGAGTGGAAAGTGCCAACTACTTTTATTTATGGCTATCAAGATTGGATGAATTATCAAGGGGCTCAAGAAGCTCGCAAGGATATGAAGGTCCCATGTGAGATTATTAGAGTTCCTGAGGCGGGACACTTTGTATTCATAGACAATCCCGAGGGTTTCCATTCAGCTGTTTTGTACGCTTGCCGTAGATTTCTGTCACCTAACCCAGACAATGAATCTTTGCCTGAAAGTTTGACAGCTGCTTGA

Protein Analysis

408

Amino Acids

45.77

Weight (kDa)

9.2

Isoelectric Point (pI)

45.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_1 PF00561 112 - 377 5.3e-28 alpha/beta hydrolase fold
Hydrolase_4 PF12146 113 - 375 2.9e-18 Serine aminopeptidase, S33
Abhydrolase_6 PF12697 114 - 380 2.5e-20 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 15
AccBSI CCGCTC 2 cut(s) 223, 682
AccI GTMKAC 1 cut(s) 13
AccII CGCG 1 cut(s) 203
AccIII TCCGGA 1 cut(s) 610
AclWI GGATC 5 cut(s) 139, 152, 231, 244, 457
AcoI YGGCCR 1 cut(s) 30
AcsI RAATTY 1 cut(s) 388
AcuI CTGAAG 2 cut(s) 504, 956
AfaI GTAC 3 cut(s) 832, 887, 1157
AfiI CCNNNNNNNGG 4 cut(s) 371, 498, 733, 1103
AflIII ACRYGT 1 cut(s) 882
AgsI TTSAA 1 cut(s) 928
AluBI AGCT 7 cut(s) 64, 590, 760, 899, 1055, 1148, 1220
AluI AGCT 7 cut(s) 64, 590, 760, 899, 1055, 1148, 1220
Alw21I GWGCWC 3 cut(s) 66, 618, 829
AlwI GGATC 5 cut(s) 139, 152, 231, 244, 457
Ama87I CYCGRG 2 cut(s) 248, 1130
Aor13HI TCCGGA 1 cut(s) 610
AoxI GGCC 4 cut(s) 30, 125, 241, 776
ApeKI GCWGC 3 cut(s) 587, 899, 1220
ApoI RAATTY 1 cut(s) 388
ArsI GACNNNNNNTTYG 2 cut(s) 95, 127
AspLEI GCGC 3 cut(s) 186, 400, 601
AspS9I GGNCC 9 cut(s) 48, 126, 242, 362, 641, 776, 785, 840, 1072
AsuC2I CCSGG 2 cut(s) 249, 250
AsuHPI GGTGA 3 cut(s) 238, 271, 1170
AvaI CYCGRG 2 cut(s) 248, 1130
AvaII GGWCC 6 cut(s) 48, 362, 641, 785, 840, 1072
AxyI CCTNAGG 1 cut(s) 1098
BamHI GGATCC 2 cut(s) 144, 236
BanII GRGCYC 2 cut(s) 66, 1048
Bbv12I GWGCWC 3 cut(s) 66, 618, 829
BbvI GCAGC 3 cut(s) 599, 886, 1207
BceAI ACGGC 2 cut(s) 370, 1149
BclI TGATCA 1 cut(s) 430
BcnI CCSGG 2 cut(s) 249, 250
BfaI CTAG 1 cut(s) 816
BfoI RGCGCY 1 cut(s) 187
BfuAI ACCTGC 1 cut(s) 15
BglI GCCNNNNNGGC 1 cut(s) 104
BisI GCNGC 6 cut(s) 54, 57, 174, 588, 900, 1221
BlsI GCNGC 6 cut(s) 55, 58, 175, 589, 901, 1222
Bme1390I CCNGG 2 cut(s) 249, 250
Bme18I GGWCC 6 cut(s) 48, 362, 641, 785, 840, 1072
BmeT110I CYCGRG 2 cut(s) 248, 1130
BmgT120I GGNCC 9 cut(s) 48, 126, 242, 362, 641, 776, 785, 840, 1072
BmiI GGNNCC 6 cut(s) 146, 238, 642, 786, 841, 1074
BmrFI CCNGG 2 cut(s) 249, 250
BmsI GCATC 4 cut(s) 385, 616, 658, 989
BoxI GACNNNNGTC 1 cut(s) 19
BpuEI CTTGAG 2 cut(s) 354, 1032
BpuMI CCSGG 2 cut(s) 249, 250
BsaAI YACGTR 1 cut(s) 883
BsaJI CCNNGG 3 cut(s) 248, 779, 1131
BsaWI WCCGGW 1 cut(s) 610
Bsc4I CCNNNNNNNGG 4 cut(s) 371, 498, 733, 1103
Bse21I CCTNAGG 1 cut(s) 1098
Bse3DI GCAATG 2 cut(s) 289, 420
BseAI TCCGGA 1 cut(s) 610
BseDI CCNNGG 3 cut(s) 248, 779, 1131
BseGI GGATG 2 cut(s) 607, 1035
BseLI CCNNNNNNNGG 4 cut(s) 371, 498, 733, 1103
BseMI GCAATG 2 cut(s) 289, 420
BseMII CTCAG 3 cut(s) 556, 767, 1089
BseRI GAGGAG 3 cut(s) 125, 179, 741
BseXI GCAGC 3 cut(s) 599, 886, 1207
BseYI CCCAGC 1 cut(s) 441
Bsh1236I CGCG 1 cut(s) 203
Bsh1285I CGRYCG 1 cut(s) 275
BshFI GGCC 4 cut(s) 32, 127, 243, 778
BsiEI CGRYCG 1 cut(s) 275
BsiHKAI GWGCWC 3 cut(s) 66, 618, 829
BsiHKCI CYCGRG 2 cut(s) 248, 1130
BsiSI CCGG 3 cut(s) 240, 249, 611
BslFI GGGAC 3 cut(s) 853, 1058, 1119
BslI CCNNNNNNNGG 4 cut(s) 371, 498, 733, 1103
BsmFI GGGAC 3 cut(s) 853, 1058, 1119
BsnI GGCC 4 cut(s) 32, 127, 243, 778
BsoBI CYCGRG 2 cut(s) 248, 1130
Bsp1286I GDGCHC 4 cut(s) 66, 618, 829, 1048
Bsp13I TCCGGA 1 cut(s) 610
Bsp143I GATC 5 cut(s) 144, 160, 236, 430, 449
Bsp68I TCGCGA 1 cut(s) 203
BspANI GGCC 4 cut(s) 32, 127, 243, 778
BspCNI CTCAG 3 cut(s) 555, 766, 1090
BspEI TCCGGA 1 cut(s) 610
BspFNI CGCG 1 cut(s) 203
BspLI GGNNCC 6 cut(s) 146, 238, 642, 786, 841, 1074
BspMI ACCTGC 1 cut(s) 15
BspPI GGATC 5 cut(s) 139, 152, 231, 244, 457
BsrBI CCGCTC 2 cut(s) 223, 682
BsrDI GCAATG 2 cut(s) 289, 420
BssECI CCNNGG 3 cut(s) 248, 779, 1131
BssMI GATC 5 cut(s) 144, 160, 236, 430, 449
BssT1I CCWWGG 1 cut(s) 779
Bst4CI ACNGT 2 cut(s) 307, 362
Bst6I CTCTTC 1 cut(s) 972
BstBAI YACGTR 1 cut(s) 883
BstC8I GCNNGC 5 cut(s) 245, 280, 402, 1057, 1162
BstDEI CTNAG 4 cut(s) 542, 591, 753, 1098
BstENI CCTNNNNNAGG 1 cut(s) 369
BstF5I GGATG 2 cut(s) 607, 1035
BstFNI CGCG 1 cut(s) 203
BstH2I RGCGCY 1 cut(s) 187
BstHHI GCGC 3 cut(s) 186, 400, 601
BstKTI GATC 5 cut(s) 147, 163, 239, 433, 452
BstMBI GATC 5 cut(s) 144, 160, 236, 430, 449
BstMCI CGRYCG 1 cut(s) 275
BstNSI RCATGY 1 cut(s) 474
BstPAI GACNNNNGTC 1 cut(s) 19
BstSCI CCNGG 2 cut(s) 247, 248
BstUI CGCG 1 cut(s) 203
BstV1I GCAGC 3 cut(s) 599, 886, 1207
BstX2I RGATCY 2 cut(s) 144, 236
BstYI RGATCY 2 cut(s) 144, 236
Bsu36I CCTNAGG 1 cut(s) 1098
BsuRI GGCC 4 cut(s) 32, 127, 243, 778
BtgZI GCGATG 1 cut(s) 154
BtsCI GGATG 2 cut(s) 607, 1035
BtsIMutI CAGTG 1 cut(s) 480
BtuMI TCGCGA 1 cut(s) 203
BveI ACCTGC 1 cut(s) 15
Cac8I GCNNGC 5 cut(s) 245, 280, 402, 1057, 1162
CfoI GCGC 3 cut(s) 186, 400, 601
Cfr13I GGNCC 9 cut(s) 48, 126, 242, 362, 641, 776, 785, 840, 1072
Cfr9I CCCGGG 1 cut(s) 248
Csp6I GTAC 3 cut(s) 831, 886, 1156
CspCI CAANNNNNGTGG 2 cut(s) 892, 927
CviAII CATG 5 cut(s) 471, 498, 705, 857, 1077
CviQI GTAC 3 cut(s) 831, 886, 1156
DdeI CTNAG 4 cut(s) 542, 591, 753, 1098
DpnI GATC 5 cut(s) 146, 162, 238, 432, 451
DpnII GATC 5 cut(s) 144, 160, 236, 430, 449
DraI TTTAAA 1 cut(s) 697
EaeI YGGCCR 1 cut(s) 30
Eam1104I CTCTTC 1 cut(s) 972
EarI CTCTTC 1 cut(s) 972
EciI GGCGGA 2 cut(s) 40, 541
Ecl136II GAGCTC 1 cut(s) 64
Eco130I CCWWGG 1 cut(s) 779
Eco24I GRGCYC 2 cut(s) 66, 1048
Eco47I GGWCC 6 cut(s) 48, 362, 641, 785, 840, 1072
Eco53kI GAGCTC 1 cut(s) 64
Eco57I CTGAAG 2 cut(s) 504, 956
Eco81I CCTNAGG 1 cut(s) 1098
Eco88I CYCGRG 2 cut(s) 248, 1130
EcoICRI GAGCTC 1 cut(s) 64
EcoNI CCTNNNNNAGG 1 cut(s) 369
EcoO109I RGGNCCY 3 cut(s) 641, 776, 1072
EcoT14I CCWWGG 1 cut(s) 779
EcoT38I GRGCYC 2 cut(s) 66, 1048
ErhI CCWWGG 1 cut(s) 779
FaeI CATG 5 cut(s) 474, 501, 708, 860, 1080
FaqI GGGAC 3 cut(s) 853, 1058, 1119
FatI CATG 5 cut(s) 470, 497, 704, 856, 1076
FauI CCCGC 3 cut(s) 216, 252, 1096
FauNDI CATATG 1 cut(s) 211
FbaI TGATCA 1 cut(s) 430
FblI GTMKAC 1 cut(s) 13
Fnu4HI GCNGC 6 cut(s) 54, 57, 174, 588, 900, 1221
FokI GGATG 2 cut(s) 594, 1042
FriOI GRGCYC 2 cut(s) 66, 1048
Fsp4HI GCNGC 6 cut(s) 54, 57, 174, 588, 900, 1221
FspBI CTAG 1 cut(s) 816
GlaI GCGC 3 cut(s) 185, 399, 600
GluI GCNGC 6 cut(s) 54, 57, 174, 588, 900, 1221
GsaI CCCAGC 1 cut(s) 445
HaeII RGCGCY 1 cut(s) 187
HaeIII GGCC 4 cut(s) 32, 127, 243, 778
HapII CCGG 3 cut(s) 240, 249, 611
HhaI GCGC 3 cut(s) 186, 400, 601
Hin1II CATG 5 cut(s) 474, 501, 708, 860, 1080
Hin6I GCGC 3 cut(s) 184, 398, 599
HinP1I GCGC 3 cut(s) 184, 398, 599
HinfI GANTC 7 cut(s) 15, 205, 329, 509, 737, 860, 1196
HpaII CCGG 3 cut(s) 240, 249, 611
HphI GGTGA 3 cut(s) 238, 271, 1170
Hpy166II GTNNAC 3 cut(s) 14, 352, 886
Hpy188I TCNGA 7 cut(s) 68, 756, 767, 947, 960, 975, 985
Hpy188III TCNNGA 8 cut(s) 24, 202, 218, 611, 1022, 1049, 1097, 1130
Hpy8I GTNNAC 3 cut(s) 14, 352, 886
HpyAV CCTTC 3 cut(s) 250, 375, 1063
HpyCH4III ACNGT 2 cut(s) 307, 362
HpyCH4IV ACGT 2 cut(s) 110, 882
HpyCH4V TGCA 6 cut(s) 404, 474, 587, 671, 691, 980
HpyF3I CTNAG 4 cut(s) 542, 591, 753, 1098
HpySE526I ACGT 2 cut(s) 110, 882
Hsp92II CATG 5 cut(s) 474, 501, 708, 860, 1080
HspAI GCGC 3 cut(s) 184, 398, 599
Kpn2I TCCGGA 1 cut(s) 610
Ksp22I TGATCA 1 cut(s) 430
Kzo9I GATC 5 cut(s) 144, 160, 236, 430, 449
LmnI GCTCC 5 cut(s) 69, 220, 613, 713, 947
Lsp1109I GCAGC 3 cut(s) 599, 886, 1207
LweI GCATC 4 cut(s) 385, 616, 658, 989
MaeI CTAG 1 cut(s) 816
MaeII ACGT 2 cut(s) 110, 882
MaeIII GTNAC 3 cut(s) 307, 803, 1176
MalI GATC 5 cut(s) 146, 162, 238, 432, 451
MbiI CCGCTC 2 cut(s) 223, 682
MboI GATC 5 cut(s) 144, 160, 236, 430, 449
MboII GAAGA 7 cut(s) 47, 370, 497, 530, 677, 959, 962
MflI RGATCY 2 cut(s) 144, 236
MhlI GDGCHC 4 cut(s) 66, 618, 829, 1048
MluCI AATT 5 cut(s) 388, 717, 742, 917, 1033
MlyI GAGTC 3 cut(s) 9, 199, 746
MmeI TCCRAC 2 cut(s) 91, 122
MroI TCCGGA 1 cut(s) 610
MseI TTAA 3 cut(s) 621, 696, 723
MslI CAYNNNNRTG 1 cut(s) 985
MspA1I CMGCKG 3 cut(s) 662, 1148, 1220
MspI CCGG 3 cut(s) 240, 249, 611
MspR9I CCNGG 2 cut(s) 249, 250
MvnI CGCG 1 cut(s) 203
NciI CCSGG 2 cut(s) 249, 250
NdeI CATATG 1 cut(s) 211
NdeII GATC 5 cut(s) 144, 160, 236, 430, 449
NlaIII CATG 5 cut(s) 474, 501, 708, 860, 1080
NlaIV GGNNCC 6 cut(s) 146, 238, 642, 786, 841, 1074
NmeAIII GCCGAG 2 cut(s) 85, 202
NmuCI GTSAC 1 cut(s) 1176
NruI TCGCGA 1 cut(s) 203
NspI RCATGY 1 cut(s) 474
PfeI GAWTC 4 cut(s) 329, 509, 860, 1196
PkrI GCNGC 6 cut(s) 55, 58, 175, 589, 901, 1222
PleI GAGTC 3 cut(s) 9, 199, 745
PpsI GAGTC 3 cut(s) 9, 199, 745
Ppu21I YACGTR 1 cut(s) 883
PpuMI RGGWCCY 2 cut(s) 641, 1072
PshAI GACNNNNGTC 1 cut(s) 19
Psp124BI GAGCTC 1 cut(s) 66
Psp5II RGGWCCY 2 cut(s) 641, 1072
PspFI CCCAGC 1 cut(s) 441
PspN4I GGNNCC 6 cut(s) 146, 238, 642, 786, 841, 1074
PspPI GGNCC 9 cut(s) 48, 126, 242, 362, 641, 776, 785, 840, 1072
PspPPI RGGWCCY 2 cut(s) 641, 1072
PsuI RGATCY 2 cut(s) 144, 236
PvuII CAGCTG 2 cut(s) 1148, 1220
RruI TCGCGA 1 cut(s) 203
RsaI GTAC 3 cut(s) 832, 887, 1157
RsaNI GTAC 3 cut(s) 831, 886, 1156
RseI CAYNNNNRTG 1 cut(s) 985
SacI GAGCTC 1 cut(s) 66
SaqAI TTAA 3 cut(s) 621, 696, 723
SatI GCNGC 6 cut(s) 54, 57, 174, 588, 900, 1221
Sau3AI GATC 5 cut(s) 144, 160, 236, 430, 449
Sau96I GGNCC 9 cut(s) 48, 126, 242, 362, 641, 776, 785, 840, 1072
SchI GAGTC 3 cut(s) 9, 199, 746
ScrFI CCNGG 2 cut(s) 249, 250
SduI GDGCHC 4 cut(s) 66, 618, 829, 1048
SfaNI GCATC 4 cut(s) 385, 616, 658, 989
SinI GGWCC 6 cut(s) 48, 362, 641, 785, 840, 1072
SmaI CCCGGG 1 cut(s) 250
SmiMI CAYNNNNRTG 1 cut(s) 985
SmlI CTYRAG 2 cut(s) 369, 1047
SmoI CTYRAG 2 cut(s) 369, 1047
Sse9I AATT 5 cut(s) 388, 717, 742, 917, 1033
SspI AATATT 1 cut(s) 232
SspMI CTAG 1 cut(s) 816
SstI GAGCTC 1 cut(s) 66
StyD4I CCNGG 2 cut(s) 247, 248
StyI CCWWGG 1 cut(s) 779
TaaI ACNGT 2 cut(s) 307, 362
TaiI ACGT 2 cut(s) 113, 885
TaqI TCGA 1 cut(s) 254
TaqII GACCGA 1 cut(s) 261
TasI AATT 5 cut(s) 388, 717, 742, 917, 1033
TauI GCSGC 3 cut(s) 56, 59, 176
TfiI GAWTC 4 cut(s) 329, 509, 860, 1196
Tru1I TTAA 3 cut(s) 621, 696, 723
Tru9I TTAA 3 cut(s) 621, 696, 723
TscAI CASTG 1 cut(s) 487
TseFI GTSAC 1 cut(s) 1176
TseI GCWGC 3 cut(s) 587, 899, 1220
Tsp45I GTSAC 1 cut(s) 1176
TspDTI ATGAA 8 cut(s) 17, 558, 867, 873, 1046, 1082, 1108, 1209
TspGWI ACGGA 1 cut(s) 128
TspMI CCCGGG 1 cut(s) 248
TspRI CASTG 1 cut(s) 487
VpaK11BI GGWCC 6 cut(s) 48, 362, 641, 785, 840, 1072
XagI CCTNNNNNAGG 1 cut(s) 369
XapI RAATTY 1 cut(s) 388
XceI RCATGY 1 cut(s) 474
XmaI CCCGGG 1 cut(s) 248
XmiI GTMKAC 1 cut(s) 13
XspI CTAG 1 cut(s) 816
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.