Rmu_ssc0000160.1_g000020

Abhydrolase domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000160.1
Physical Location & Seq
Reverse (-)
91982 .. 95272
3291 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000160.1_g000020.1.cds

Sequence Viewer

Length: 1398 bp
atgtgctccccacaccacacgatccacaatttcgcacgtggccagaatagtcgccttagattcgaagctcctccccgtcctagtcaaaaaggcgcgcacatcggcggtgaagcatcgtcgtcgtctataaactcaagcgcgtcgattattccaaaccacttaggaagctttgaaaagcgtatgaatctgcgtagactctcgtccagaatggcagaagaaatcagtaggtccgccgccgccgccgagctccgaccctctgcttccaccgccaccgccacaaagtcaaaatcgcgctggccctccctcctccgttggatcccgacctccaccgatgacatcatcgccgccgagaagcgcctcctctctcttgtcgcgactccatatgttcaggagcgggtgaatattggatccggcccgcccgggtcgaaggtgaggtggtttcggtcggcaagcaatgaggaaaggtttatcaacacggttacttttgacagcaaagaggattctcctactcttgtaatggttcacggctacggtgcttctcaaggtttcttctttagaaattttgatgcccttgcaagtcggttcagggtcattgctattgatcaacttggctggggtggatcaagcagacctgattttacatgcaaaagcactgaagaaaccgaagcatggtttattgattctttggaagaatggcggaaagccaaaaatctcagcaactttatattacttggacattcatttggtgggtatgttgcagctaagtatgcgctaaagcatccggagcacattaagcatttagttttagtgggtcctgctgggttctcttcagcggaagatgcaaggaatgagtggattatgcagtttaaaacaacatggaaaggagcaattattaaccatttatgggagtctaattttactcctcagaagctaatcagagggttagggccttggggtccaaagattgttcggggttacacaaatactagatttggcgctcgtgcagcagggaccaccctaaatgaacatgaatcacaactgctaacagattacgtgtaccatactttagctgccaaagcaagtggagaattgtgcttgaaatatatattttctttcggagcgtttgctcggaagcctcttcttcagagtgcatcagagtggaaagtgccaactacttttatttatggctatcaagattggatgaattatcaaggggctcaagaagctcgcaaggatatgaaggtcccatgtgagattattagagttcctgaggcgggacactttgtattcatagacaatcccgagggtttccattcagctgttctgtacgcttgccgtagatttctgtcaccaaacccagaccatgaatctttgcctgaaagtttgacagctgcttga

Protein Analysis

465

Amino Acids

51.96

Weight (kDa)

9.36

Isoelectric Point (pI)

47.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 394
AccI GTMKAC 1 cut(s) 193
AccII CGCG 4 cut(s) 95, 140, 292, 374
AccIII TCCGGA 1 cut(s) 781
AclWI GGATC 6 cut(s) 16, 310, 323, 402, 415, 628
AcoI YGGCCR 1 cut(s) 40
AcsI RAATTY 1 cut(s) 559
AcuI CTGAAG 3 cut(s) 675, 813, 1127
AcvI CACGTG 1 cut(s) 38
AfaI GTAC 2 cut(s) 1058, 1328
AfiI CCNNNNNNNGG 3 cut(s) 669, 904, 1274
AflIII ACRYGT 1 cut(s) 1053
AgsI TTSAA 2 cut(s) 173, 1099
AluBI AGCT 9 cut(s) 68, 168, 247, 761, 931, 1070, 1226, 1319, 1391
AluI AGCT 9 cut(s) 68, 168, 247, 761, 931, 1070, 1226, 1319, 1391
Alw21I GWGCWC 3 cut(s) 8, 249, 789
AlwI GGATC 6 cut(s) 16, 310, 323, 402, 415, 628
Ama87I CYCGRG 2 cut(s) 419, 1301
Aor13HI TCCGGA 1 cut(s) 781
AoxI GGCC 4 cut(s) 40, 296, 412, 947
ApeKI GCWGC 4 cut(s) 758, 1004, 1070, 1391
ApoI RAATTY 1 cut(s) 559
AspLEI GCGC 7 cut(s) 95, 97, 140, 294, 357, 772, 998
AspS9I GGNCC 8 cut(s) 228, 297, 413, 812, 947, 956, 1011, 1243
AsuC2I CCSGG 2 cut(s) 420, 421
AsuHPI GGTGA 4 cut(s) 119, 409, 442, 1341
AsuII TTCGAA 1 cut(s) 63
AvaI CYCGRG 2 cut(s) 419, 1301
AvaII GGWCC 5 cut(s) 228, 812, 956, 1011, 1243
AxyI CCTNAGG 1 cut(s) 1269
BalI TGGCCA 1 cut(s) 42
BamHI GGATCC 2 cut(s) 315, 407
BanII GRGCYC 2 cut(s) 249, 1219
BauI CACGAG 1 cut(s) 999
BbrPI CACGTG 1 cut(s) 38
Bbv12I GWGCWC 3 cut(s) 8, 249, 789
BbvI GCAGC 4 cut(s) 770, 1016, 1057, 1378
BceAI ACGGC 2 cut(s) 541, 1320
BcgI CGANNNNNNTGC 2 cut(s) 102, 136
BclI TGATCA 1 cut(s) 601
BcnI CCSGG 2 cut(s) 420, 421
BfaI CTAG 2 cut(s) 81, 987
BfoI RGCGCY 2 cut(s) 358, 999
BisI GCNGC 8 cut(s) 234, 237, 240, 345, 759, 1005, 1071, 1392
BlsI GCNGC 8 cut(s) 235, 238, 241, 346, 760, 1006, 1072, 1393
Bme1390I CCNGG 2 cut(s) 420, 421
Bme18I GGWCC 5 cut(s) 228, 812, 956, 1011, 1243
BmeT110I CYCGRG 2 cut(s) 419, 1301
BmgT120I GGNCC 8 cut(s) 228, 297, 413, 812, 947, 956, 1011, 1243
BmiI GGNNCC 6 cut(s) 317, 409, 813, 957, 1012, 1245
BmrFI CCNGG 2 cut(s) 420, 421
BmsI GCATC 5 cut(s) 122, 556, 787, 829, 1160
BoxI GACNNNNGTC 1 cut(s) 199
Bpu14I TTCGAA 1 cut(s) 63
BpuEI CTTGAG 3 cut(s) 118, 525, 1203
BpuMI CCSGG 2 cut(s) 420, 421
BsaAI YACGTR 2 cut(s) 38, 1054
BsaJI CCNNGG 3 cut(s) 419, 950, 1302
BsaWI WCCGGW 1 cut(s) 781
Bsc4I CCNNNNNNNGG 3 cut(s) 669, 904, 1274
Bse21I CCTNAGG 1 cut(s) 1269
Bse3DI GCAATG 2 cut(s) 460, 591
BseAI TCCGGA 1 cut(s) 781
BseDI CCNNGG 3 cut(s) 419, 950, 1302
BseGI GGATG 2 cut(s) 778, 1206
BseLI CCNNNNNNNGG 3 cut(s) 669, 904, 1274
BseMI GCAATG 2 cut(s) 460, 591
BseMII CTCAG 3 cut(s) 727, 938, 1260
BsePI GCGCGC 1 cut(s) 93
BseRI GAGGAG 4 cut(s) 60, 296, 350, 912
BseXI GCAGC 4 cut(s) 770, 1016, 1057, 1378
BseYI CCCAGC 2 cut(s) 612, 818
BsgI GTGCAG 1 cut(s) 1023
Bsh1236I CGCG 4 cut(s) 95, 140, 292, 374
Bsh1285I CGRYCG 1 cut(s) 446
BshFI GGCC 4 cut(s) 42, 298, 414, 949
BsiEI CGRYCG 1 cut(s) 446
BsiHKAI GWGCWC 3 cut(s) 8, 249, 789
BsiHKCI CYCGRG 2 cut(s) 419, 1301
BsiSI CCGG 3 cut(s) 411, 420, 782
BslFI GGGAC 3 cut(s) 1024, 1229, 1290
BslI CCNNNNNNNGG 3 cut(s) 669, 904, 1274
BsmFI GGGAC 3 cut(s) 1024, 1229, 1290
BsnI GGCC 4 cut(s) 42, 298, 414, 949
BsoBI CYCGRG 2 cut(s) 419, 1301
Bsp119I TTCGAA 1 cut(s) 63
Bsp1286I GDGCHC 4 cut(s) 8, 249, 789, 1219
Bsp13I TCCGGA 1 cut(s) 781
Bsp143I GATC 5 cut(s) 21, 315, 407, 601, 620
Bsp68I TCGCGA 1 cut(s) 374
BspANI GGCC 4 cut(s) 42, 298, 414, 949
BspCNI CTCAG 3 cut(s) 726, 937, 1261
BspEI TCCGGA 1 cut(s) 781
BspFNI CGCG 4 cut(s) 95, 140, 292, 374
BspLI GGNNCC 6 cut(s) 317, 409, 813, 957, 1012, 1245
BspPI GGATC 6 cut(s) 16, 310, 323, 402, 415, 628
BspT104I TTCGAA 1 cut(s) 63
BsrBI CCGCTC 1 cut(s) 394
BsrDI GCAATG 2 cut(s) 460, 591
BssECI CCNNGG 3 cut(s) 419, 950, 1302
BssHII GCGCGC 1 cut(s) 93
BssMI GATC 5 cut(s) 21, 315, 407, 601, 620
BssSI CACGAG 1 cut(s) 999
BssT1I CCWWGG 1 cut(s) 950
Bst2BI CACGAG 1 cut(s) 999
Bst4CI ACNGT 2 cut(s) 478, 533
Bst6I CTCTTC 2 cut(s) 832, 1143
BstBAI YACGTR 2 cut(s) 38, 1054
BstBI TTCGAA 1 cut(s) 63
BstC8I GCNNGC 6 cut(s) 95, 296, 416, 451, 1228, 1333
BstDEI CTNAG 6 cut(s) 56, 160, 713, 762, 924, 1269
BstF5I GGATG 2 cut(s) 778, 1206
BstFNI CGCG 4 cut(s) 95, 140, 292, 374
BstH2I RGCGCY 2 cut(s) 358, 999
BstHHI GCGC 7 cut(s) 95, 97, 140, 294, 357, 772, 998
BstKTI GATC 5 cut(s) 24, 318, 410, 604, 623
BstMBI GATC 5 cut(s) 21, 315, 407, 601, 620
BstMCI CGRYCG 1 cut(s) 446
BstMWI GCNNNNNNNGC 9 cut(s) 239, 266, 767, 784, 793, 839, 1004, 1076, 1223
BstNSI RCATGY 1 cut(s) 645
BstPAI GACNNNNGTC 1 cut(s) 199
BstSCI CCNGG 2 cut(s) 418, 419
BstUI CGCG 4 cut(s) 95, 140, 292, 374
BstV1I GCAGC 4 cut(s) 770, 1016, 1057, 1378
BstX2I RGATCY 2 cut(s) 315, 407
BstYI RGATCY 2 cut(s) 315, 407
Bsu36I CCTNAGG 1 cut(s) 1269
BsuRI GGCC 4 cut(s) 42, 298, 414, 949
BtgZI GCGATG 1 cut(s) 325
BtsCI GGATG 2 cut(s) 778, 1206
BtsIMutI CAGTG 1 cut(s) 651
BtuMI TCGCGA 1 cut(s) 374
Cac8I GCNNGC 6 cut(s) 95, 296, 416, 451, 1228, 1333
CfoI GCGC 7 cut(s) 95, 97, 140, 294, 357, 772, 998
Cfr13I GGNCC 8 cut(s) 228, 297, 413, 812, 947, 956, 1011, 1243
Cfr9I CCCGGG 1 cut(s) 419
CseI GACGC 1 cut(s) 129
Csp6I GTAC 2 cut(s) 1057, 1327
CspCI CAANNNNNGTGG 2 cut(s) 1063, 1098
CviAII CATG 6 cut(s) 642, 669, 876, 1028, 1248, 1364
CviQI GTAC 2 cut(s) 1057, 1327
DdeI CTNAG 6 cut(s) 56, 160, 713, 762, 924, 1269
DpnI GATC 5 cut(s) 23, 317, 409, 603, 622
DpnII GATC 5 cut(s) 21, 315, 407, 601, 620
DraI TTTAAA 1 cut(s) 868
EaeI YGGCCR 1 cut(s) 40
Eam1104I CTCTTC 2 cut(s) 832, 1143
EarI CTCTTC 2 cut(s) 832, 1143
EciI GGCGGA 2 cut(s) 220, 712
Ecl136II GAGCTC 1 cut(s) 247
Eco130I CCWWGG 1 cut(s) 950
Eco24I GRGCYC 2 cut(s) 249, 1219
Eco47I GGWCC 5 cut(s) 228, 812, 956, 1011, 1243
Eco53kI GAGCTC 1 cut(s) 247
Eco57I CTGAAG 3 cut(s) 675, 813, 1127
Eco72I CACGTG 1 cut(s) 38
Eco81I CCTNAGG 1 cut(s) 1269
Eco88I CYCGRG 2 cut(s) 419, 1301
EcoICRI GAGCTC 1 cut(s) 247
EcoO109I RGGNCCY 3 cut(s) 812, 947, 1243
EcoT14I CCWWGG 1 cut(s) 950
EcoT38I GRGCYC 2 cut(s) 249, 1219
ErhI CCWWGG 1 cut(s) 950
FaeI CATG 6 cut(s) 645, 672, 879, 1031, 1251, 1367
FaqI GGGAC 3 cut(s) 1024, 1229, 1290
FatI CATG 6 cut(s) 641, 668, 875, 1027, 1247, 1363
FauI CCCGC 3 cut(s) 387, 423, 1267
FauNDI CATATG 1 cut(s) 382
FbaI TGATCA 1 cut(s) 601
FblI GTMKAC 1 cut(s) 193
Fnu4HI GCNGC 8 cut(s) 234, 237, 240, 345, 759, 1005, 1071, 1392
FokI GGATG 2 cut(s) 765, 1213
FriOI GRGCYC 2 cut(s) 249, 1219
Fsp4HI GCNGC 8 cut(s) 234, 237, 240, 345, 759, 1005, 1071, 1392
FspBI CTAG 2 cut(s) 81, 987
GlaI GCGC 7 cut(s) 94, 96, 139, 293, 356, 771, 997
GluI GCNGC 8 cut(s) 234, 237, 240, 345, 759, 1005, 1071, 1392
GsaI CCCAGC 2 cut(s) 616, 822
HaeII RGCGCY 2 cut(s) 358, 999
HaeIII GGCC 4 cut(s) 42, 298, 414, 949
HapII CCGG 3 cut(s) 411, 420, 782
HgaI GACGC 1 cut(s) 129
HhaI GCGC 7 cut(s) 95, 97, 140, 294, 357, 772, 998
Hin1II CATG 6 cut(s) 645, 672, 879, 1031, 1251, 1367
Hin6I GCGC 7 cut(s) 93, 95, 138, 292, 355, 770, 996
HinP1I GCGC 7 cut(s) 93, 95, 138, 292, 355, 770, 996
HindIII AAGCTT 1 cut(s) 166
HinfI GANTC 9 cut(s) 60, 184, 195, 376, 500, 680, 908, 1031, 1367
HpaII CCGG 3 cut(s) 411, 420, 782
HphI GGTGA 4 cut(s) 119, 409, 442, 1341
Hpy166II GTNNAC 3 cut(s) 194, 523, 1057
Hpy188I TCNGA 7 cut(s) 251, 927, 938, 1118, 1131, 1146, 1156
Hpy188III TCNNGA 9 cut(s) 204, 319, 373, 389, 782, 1193, 1220, 1268, 1301
Hpy8I GTNNAC 3 cut(s) 194, 523, 1057
Hpy99I CGWCG 3 cut(s) 121, 124, 145
HpyAV CCTTC 2 cut(s) 421, 1234
HpyCH4III ACNGT 2 cut(s) 478, 533
HpyCH4IV ACGT 2 cut(s) 37, 1053
HpyCH4V TGCA 7 cut(s) 575, 645, 758, 842, 862, 1004, 1151
HpyF10VI GCNNNNNNNGC 9 cut(s) 239, 266, 767, 784, 793, 839, 1004, 1076, 1223
HpyF3I CTNAG 6 cut(s) 56, 160, 713, 762, 924, 1269
HpySE526I ACGT 2 cut(s) 37, 1053
Hsp92II CATG 6 cut(s) 645, 672, 879, 1031, 1251, 1367
HspAI GCGC 7 cut(s) 93, 95, 138, 292, 355, 770, 996
Kpn2I TCCGGA 1 cut(s) 781
Ksp22I TGATCA 1 cut(s) 601
Kzo9I GATC 5 cut(s) 21, 315, 407, 601, 620
LmnI GCTCC 7 cut(s) 11, 73, 252, 391, 784, 884, 1118
Lsp1109I GCAGC 4 cut(s) 770, 1016, 1057, 1378
LweI GCATC 5 cut(s) 122, 556, 787, 829, 1160
MaeI CTAG 2 cut(s) 81, 987
MaeII ACGT 2 cut(s) 37, 1053
MaeIII GTNAC 3 cut(s) 478, 974, 1347
MalI GATC 5 cut(s) 23, 317, 409, 603, 622
MbiI CCGCTC 1 cut(s) 394
MboI GATC 5 cut(s) 21, 315, 407, 601, 620
MboII GAAGA 8 cut(s) 227, 541, 668, 701, 819, 848, 1130, 1133
MflI RGATCY 2 cut(s) 315, 407
MhlI GDGCHC 4 cut(s) 8, 249, 789, 1219
MlsI TGGCCA 1 cut(s) 42
MluCI AATT 6 cut(s) 28, 559, 888, 913, 1088, 1204
MluNI TGGCCA 1 cut(s) 42
MlyI GAGTC 3 cut(s) 189, 370, 917
MmeI TCCRAC 2 cut(s) 274, 293
Mox20I TGGCCA 1 cut(s) 42
MroI TCCGGA 1 cut(s) 781
MscI TGGCCA 1 cut(s) 42
MseI TTAA 3 cut(s) 792, 867, 894
MslI CAYNNNNRTG 1 cut(s) 1156
Msp20I TGGCCA 1 cut(s) 42
MspA1I CMGCKG 3 cut(s) 833, 1319, 1391
MspI CCGG 3 cut(s) 411, 420, 782
MspR9I CCNGG 2 cut(s) 420, 421
MvnI CGCG 4 cut(s) 95, 140, 292, 374
MwoI GCNNNNNNNGC 9 cut(s) 239, 266, 767, 784, 793, 839, 1004, 1076, 1223
NciI CCSGG 2 cut(s) 420, 421
NdeI CATATG 1 cut(s) 382
NdeII GATC 5 cut(s) 21, 315, 407, 601, 620
NlaIII CATG 6 cut(s) 645, 672, 879, 1031, 1251, 1367
NlaIV GGNNCC 6 cut(s) 317, 409, 813, 957, 1012, 1245
NmeAIII GCCGAG 2 cut(s) 268, 373
NmuCI GTSAC 1 cut(s) 1347
NruI TCGCGA 1 cut(s) 374
NspI RCATGY 1 cut(s) 645
NspV TTCGAA 1 cut(s) 63
PauI GCGCGC 1 cut(s) 93
PfeI GAWTC 6 cut(s) 60, 184, 500, 680, 1031, 1367
PkrI GCNGC 8 cut(s) 235, 238, 241, 346, 760, 1006, 1072, 1393
PleI GAGTC 3 cut(s) 189, 370, 916
PmaCI CACGTG 1 cut(s) 38
PmlI CACGTG 1 cut(s) 38
PpsI GAGTC 3 cut(s) 189, 370, 916
Ppu21I YACGTR 2 cut(s) 38, 1054
PpuMI RGGWCCY 2 cut(s) 812, 1243
PshAI GACNNNNGTC 1 cut(s) 199
Psp124BI GAGCTC 1 cut(s) 249
Psp5II RGGWCCY 2 cut(s) 812, 1243
PspCI CACGTG 1 cut(s) 38
PspFI CCCAGC 2 cut(s) 612, 818
PspN4I GGNNCC 6 cut(s) 317, 409, 813, 957, 1012, 1245
PspPI GGNCC 8 cut(s) 228, 297, 413, 812, 947, 956, 1011, 1243
PspPPI RGGWCCY 2 cut(s) 812, 1243
PsuI RGATCY 2 cut(s) 315, 407
PteI GCGCGC 1 cut(s) 93
PvuII CAGCTG 2 cut(s) 1319, 1391
RruI TCGCGA 1 cut(s) 374
RsaI GTAC 2 cut(s) 1058, 1328
RsaNI GTAC 2 cut(s) 1057, 1327
RseI CAYNNNNRTG 1 cut(s) 1156
SacI GAGCTC 1 cut(s) 249
SaqAI TTAA 3 cut(s) 792, 867, 894
SatI GCNGC 8 cut(s) 234, 237, 240, 345, 759, 1005, 1071, 1392
Sau3AI GATC 5 cut(s) 21, 315, 407, 601, 620
Sau96I GGNCC 8 cut(s) 228, 297, 413, 812, 947, 956, 1011, 1243
SchI GAGTC 3 cut(s) 189, 370, 917
ScrFI CCNGG 2 cut(s) 420, 421
SduI GDGCHC 4 cut(s) 8, 249, 789, 1219
SfaNI GCATC 5 cut(s) 122, 556, 787, 829, 1160
SfuI TTCGAA 1 cut(s) 63
SinI GGWCC 5 cut(s) 228, 812, 956, 1011, 1243
SmaI CCCGGG 1 cut(s) 421
SmiMI CAYNNNNRTG 1 cut(s) 1156
SmlI CTYRAG 3 cut(s) 133, 540, 1218
SmoI CTYRAG 3 cut(s) 133, 540, 1218
Sse9I AATT 6 cut(s) 28, 559, 888, 913, 1088, 1204
SspI AATATT 1 cut(s) 403
SspMI CTAG 2 cut(s) 81, 987
SstI GAGCTC 1 cut(s) 249
StyD4I CCNGG 2 cut(s) 418, 419
StyI CCWWGG 1 cut(s) 950
TaaI ACNGT 2 cut(s) 478, 533
TaiI ACGT 2 cut(s) 40, 1056
TaqI TCGA 3 cut(s) 63, 143, 425
TaqII GACCGA 1 cut(s) 432
TasI AATT 6 cut(s) 28, 559, 888, 913, 1088, 1204
TauI GCSGC 4 cut(s) 236, 239, 242, 347
TfiI GAWTC 6 cut(s) 60, 184, 500, 680, 1031, 1367
Tru1I TTAA 3 cut(s) 792, 867, 894
Tru9I TTAA 3 cut(s) 792, 867, 894
TscAI CASTG 1 cut(s) 658
TseFI GTSAC 1 cut(s) 1347
TseI GCWGC 4 cut(s) 758, 1004, 1070, 1391
Tsp45I GTSAC 1 cut(s) 1347
TspDTI ATGAA 8 cut(s) 197, 729, 1038, 1044, 1217, 1253, 1279, 1380
TspGWI ACGGA 1 cut(s) 299
TspMI CCCGGG 1 cut(s) 419
TspRI CASTG 1 cut(s) 658
VpaK11BI GGWCC 5 cut(s) 228, 812, 956, 1011, 1243
XapI RAATTY 1 cut(s) 559
XceI RCATGY 1 cut(s) 645
XmaI CCCGGG 1 cut(s) 419
XmiI GTMKAC 1 cut(s) 193
XspI CTAG 2 cut(s) 81, 987
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.