pycom08g01530

Abhydrolase domain-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
1163516 .. 1166780
3265 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g01530.1

Sequence Viewer

Length: 1245 bp
ATGAACCTGCGTGGAATTTCGTCGAGAATGGCCGACGAAATCAGCAGGTCCGGCGACCTAGGAACCTCCCCTGCCACCGTTGCTGCGGCCTACGAATCCGTTGCTGTTGCTGCTGCGGCTAATCCCAAATCCAGATCCTTGTGGCCTTCTGTCCTCCGTTGGATCCCCACCTCCACCGATAAGATCATTGCCGCCGAGAAGCGCCTCCTTTCTCTTGTCAAGACTCCTTATGTTCAAGAACGGGTGAATATAGGCTCTGGACCGCCGGGCTCCAAAGTCCGGTGGTTTCGATCCGAAAGCAATGAAGAAAGGCAAATCAACACGGTTACATTTGACAGCAAAGAGAATTCTCCTACGATTGTTATGATTCACGGATACGGTGCTTCTCAAGGTTTCTTCTTTAGAAATTTCGATGCCCTTGCCAGTCGGTTCAGGGTCATTGCCATTGATCAAATAGGTTGGGGCGGATCAAGCAGGCCTGATTTTACATGCAAAAGCACTGAAGAAACTGAGGCATGGTTCATTGATTCCTTTGAGGAATGGCGAAAAGCCAAAAACCTCAGCAACTTTATATTACTTGGGCATTCATTTGGTGGGTATGTTGCATCGAAGTACGCTCTGAAGCATCCAGAGCACGTTAAGCATTTGATTTTAGTGGGATCTGCTGGGTTTTCATCGGAGACGGATACATCATATGAGAGGCTTAACCAATTCAAAGCAACGTGGAAAGGAGCAATTTTTAACCATTTGTGGGAGTCTAATTTTACTCCTCAGAAGTTGGTCAGAGGGCTAGGGCCTTTGGGTCCAAATCTTGTTCGAAGTTACACAACTGCGAGGTTTGGTTCTTATTCAACAGGGACCACACTAACTGAAGAGGAATCCCGACTTCTAACAGATTATGTGTACCATACTTTAGCAGCCAAAGCTAGCGGGGAGCTGTGCTTAAAGTATATATTTTCTTTCGGTGCGTTTGCTAGGAGTCCCCTTATACACAGTGCATCAGAGTGGAAAGTGCCGACTACTTTTATTTATGGTTATCAAGACTGGATGAACTACCAAGGGGCTCAAGAAGCTGGCAAAAAGATGAAAGTCCCGTGCGAGATCATTAGGATTCCAGATGCTGGGCACTTTGTATTCATAGACCAACCCGATCGTTTCCATTCAGCTGTTTTTTATGCTTGCCGTAGATTTCTTTCGCCGGACCCTGCCGTTGAATCCTTTCCTGAAGGTTTGACACCTGCCTGA

Protein Analysis

415

Amino Acids

46.22

Weight (kDa)

8.85

Isoelectric Point (pI)

47.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 117 - 252 1.7e-16 Serine aminopeptidase, S33
Abhydrolase_1 PF00561 118 - 383 4e-29 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 120 - 387 2.6e-20 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 15, 36
AccB7I CCANNNNNTGG 1 cut(s) 1121
AciI CCGC 6 cut(s) 86, 116, 192, 263, 465, 930
AclWI GGATC 6 cut(s) 129, 157, 170, 285, 475, 667
AcoI YGGCCR 1 cut(s) 30
AcsI RAATTY 3 cut(s) 15, 346, 406
AcuI CTGAAG 4 cut(s) 522, 641, 891, 1245
AfaI GTAC 2 cut(s) 614, 905
AfiI CCNNNNNNNGG 3 cut(s) 279, 751, 1121
AgsI TTSAA 4 cut(s) 236, 715, 852, 1214
AluBI AGCT 4 cut(s) 926, 937, 1073, 1166
AluI AGCT 4 cut(s) 926, 937, 1073, 1166
Alw21I GWGCWC 1 cut(s) 636
Alw26I GTCTC 1 cut(s) 674
AlwI GGATC 6 cut(s) 129, 157, 170, 285, 475, 667
AlwNI CAGNNNCTG 1 cut(s) 1121
AoxI GGCC 5 cut(s) 30, 87, 143, 476, 794
ApeKI GCWGC 4 cut(s) 83, 110, 113, 917
ApoI RAATTY 3 cut(s) 15, 346, 406
Asp700I GAANNNNTTC 1 cut(s) 1218
AspA2I CCTAGG 1 cut(s) 58
AspLEI GCGC 1 cut(s) 204
AspS9I GGNCC 6 cut(s) 48, 260, 794, 803, 858, 1201
AsuC2I CCSGG 1 cut(s) 267
AsuHPI GGTGA 1 cut(s) 256
AsuII TTCGAA 1 cut(s) 817
AsuNHI GCTAGC 1 cut(s) 926
AvaII GGWCC 5 cut(s) 48, 260, 803, 858, 1201
AvrII CCTAGG 1 cut(s) 58
BaeGI GKGCMC 1 cut(s) 1128
BamHI GGATCC 1 cut(s) 162
BanII GRGCYC 2 cut(s) 272, 1066
Bbv12I GWGCWC 1 cut(s) 636
BbvCI CCTCAGC 1 cut(s) 560
BbvI GCAGC 4 cut(s) 70, 97, 100, 929
BceAI ACGGC 2 cut(s) 1167, 1193
BcgI CGANNNNNNTGC 4 cut(s) 83, 117, 401, 435
BciVI GTATCC 2 cut(s) 368, 679
BclI TGATCA 1 cut(s) 448
BcnI CCSGG 1 cut(s) 267
BcoDI GTCTC 1 cut(s) 674
BfaI CTAG 4 cut(s) 59, 791, 927, 975
BfoI RGCGCY 1 cut(s) 205
BfuAI ACCTGC 2 cut(s) 15, 36
BfuI GTATCC 2 cut(s) 368, 679
BisI GCNGC 7 cut(s) 84, 87, 111, 114, 117, 192, 918
BlnI CCTAGG 1 cut(s) 58
BlsI GCNGC 7 cut(s) 85, 88, 112, 115, 118, 193, 919
Bme1390I CCNGG 1 cut(s) 267
Bme18I GGWCC 5 cut(s) 48, 260, 803, 858, 1201
BmgT120I GGNCC 6 cut(s) 48, 260, 794, 803, 858, 1201
BmiI GGNNCC 6 cut(s) 64, 164, 271, 804, 859, 1203
BmrFI CCNGG 1 cut(s) 267
BmsI GCATC 5 cut(s) 403, 614, 634, 1007, 1108
BmtI GCTAGC 1 cut(s) 930
Bpu10I CCTNAGC 1 cut(s) 560
Bpu14I TTCGAA 1 cut(s) 817
BpuEI CTTGAG 2 cut(s) 372, 1050
BpuMI CCSGG 1 cut(s) 267
BsaJI CCNNGG 2 cut(s) 58, 1057
BsaWI WCCGGW 1 cut(s) 279
Bsc4I CCNNNNNNNGG 3 cut(s) 279, 751, 1121
Bse1I ACTGG 2 cut(s) 423, 1049
Bse3DI GCAATG 3 cut(s) 186, 307, 438
BseDI CCNNGG 2 cut(s) 58, 1057
BseGI GGATG 2 cut(s) 625, 1053
BseLI CCNNNNNNNGG 3 cut(s) 279, 751, 1121
BseMI GCAATG 3 cut(s) 186, 307, 438
BseMII CTCAG 3 cut(s) 501, 574, 785
BseNI ACTGG 2 cut(s) 423, 1049
BseRI GAGGAG 1 cut(s) 759
BseSI GKGCMC 1 cut(s) 1128
BseXI GCAGC 4 cut(s) 70, 97, 100, 929
BseYI CCCAGC 2 cut(s) 665, 1121
Bsh1285I CGRYCG 1 cut(s) 1153
BshFI GGCC 5 cut(s) 32, 89, 145, 478, 796
BsiEI CGRYCG 1 cut(s) 1153
BsiHKAI GWGCWC 1 cut(s) 636
BsiSI CCGG 4 cut(s) 51, 266, 280, 1199
BslFI GGGAC 3 cut(s) 871, 966, 1076
BslI CCNNNNNNNGG 3 cut(s) 279, 751, 1121
BsmAI GTCTC 1 cut(s) 674
BsmBI CGTCTC 1 cut(s) 674
BsmFI GGGAC 3 cut(s) 871, 966, 1076
BsmI GAATGC 1 cut(s) 583
BsnI GGCC 5 cut(s) 32, 89, 145, 478, 796
Bsp119I TTCGAA 1 cut(s) 817
Bsp1286I GDGCHC 4 cut(s) 272, 636, 1066, 1128
Bsp143I GATC 9 cut(s) 134, 162, 183, 290, 448, 467, 659, 1101, 1150
BspACI CCGC 6 cut(s) 86, 116, 192, 263, 465, 930
BspANI GGCC 5 cut(s) 32, 89, 145, 478, 796
BspCNI CTCAG 3 cut(s) 502, 573, 784
BspLI GGNNCC 6 cut(s) 64, 164, 271, 804, 859, 1203
BspMI ACCTGC 2 cut(s) 15, 36
BspOI GCTAGC 1 cut(s) 930
BspPI GGATC 6 cut(s) 129, 157, 170, 285, 475, 667
BspT104I TTCGAA 1 cut(s) 817
BsrDI GCAATG 3 cut(s) 186, 307, 438
BsrI ACTGG 2 cut(s) 423, 1049
BssECI CCNNGG 2 cut(s) 58, 1057
BssMI GATC 9 cut(s) 134, 162, 183, 290, 448, 467, 659, 1101, 1150
BssT1I CCWWGG 2 cut(s) 58, 1057
Bst4CI ACNGT 4 cut(s) 79, 325, 380, 995
Bst6I CTCTTC 1 cut(s) 867
BstBI TTCGAA 1 cut(s) 817
BstC8I GCNNGC 4 cut(s) 476, 928, 1075, 1180
BstDEI CTNAG 3 cut(s) 510, 560, 771
BstF5I GGATG 2 cut(s) 625, 1053
BstH2I RGCGCY 1 cut(s) 205
BstHHI GCGC 1 cut(s) 204
BstKTI GATC 9 cut(s) 137, 165, 186, 293, 451, 470, 662, 1104, 1153
BstMAI GTCTC 1 cut(s) 674
BstMBI GATC 9 cut(s) 134, 162, 183, 290, 448, 467, 659, 1101, 1150
BstMCI CGRYCG 1 cut(s) 1153
BstMWI GCNNNNNNNGC 9 cut(s) 51, 80, 110, 116, 471, 631, 640, 923, 1070
BstNSI RCATGY 1 cut(s) 492
BstSCI CCNGG 1 cut(s) 265
BstSLI GKGCMC 1 cut(s) 1128
BstV1I GCAGC 4 cut(s) 70, 97, 100, 929
BstX2I RGATCY 3 cut(s) 134, 162, 659
BstYI RGATCY 3 cut(s) 134, 162, 659
BsuI GTATCC 2 cut(s) 368, 679
BsuRI GGCC 5 cut(s) 32, 89, 145, 478, 796
BtsCI GGATG 2 cut(s) 625, 1053
BtsIMutI CAGTG 2 cut(s) 498, 1000
BveI ACCTGC 2 cut(s) 15, 36
Cac8I GCNNGC 4 cut(s) 476, 928, 1075, 1180
CaiI CAGNNNCTG 1 cut(s) 1121
CfoI GCGC 1 cut(s) 204
Cfr13I GGNCC 6 cut(s) 48, 260, 794, 803, 858, 1201
Csp6I GTAC 2 cut(s) 613, 904
CviAII CATG 2 cut(s) 489, 516
CviQI GTAC 2 cut(s) 613, 904
DdeI CTNAG 3 cut(s) 510, 560, 771
DpnI GATC 9 cut(s) 136, 164, 185, 292, 450, 469, 661, 1103, 1152
DpnII GATC 9 cut(s) 134, 162, 183, 290, 448, 467, 659, 1101, 1150
EaeI YGGCCR 1 cut(s) 30
Eam1104I CTCTTC 1 cut(s) 867
EarI CTCTTC 1 cut(s) 867
EciI GGCGGA 1 cut(s) 480
Eco130I CCWWGG 2 cut(s) 58, 1057
Eco147I AGGCCT 1 cut(s) 478
Eco24I GRGCYC 2 cut(s) 272, 1066
Eco47I GGWCC 5 cut(s) 48, 260, 803, 858, 1201
Eco57I CTGAAG 4 cut(s) 522, 641, 891, 1245
EcoO109I RGGNCCY 1 cut(s) 794
EcoRI GAATTC 1 cut(s) 346
EcoT14I CCWWGG 2 cut(s) 58, 1057
EcoT38I GRGCYC 2 cut(s) 272, 1066
ErhI CCWWGG 2 cut(s) 58, 1057
Esp3I CGTCTC 1 cut(s) 674
FaeI CATG 2 cut(s) 492, 519
FaqI GGGAC 3 cut(s) 871, 966, 1076
FatI CATG 2 cut(s) 488, 515
FauI CCCGC 1 cut(s) 923
FauNDI CATATG 1 cut(s) 694
FbaI TGATCA 1 cut(s) 448
Fnu4HI GCNGC 7 cut(s) 84, 87, 111, 114, 117, 192, 918
FokI GGATG 2 cut(s) 612, 1060
FriOI GRGCYC 2 cut(s) 272, 1066
Fsp4HI GCNGC 7 cut(s) 84, 87, 111, 114, 117, 192, 918
FspBI CTAG 4 cut(s) 59, 791, 927, 975
GlaI GCGC 1 cut(s) 203
GluI GCNGC 7 cut(s) 84, 87, 111, 114, 117, 192, 918
GsaI CCCAGC 2 cut(s) 669, 1125
HaeII RGCGCY 1 cut(s) 205
HaeIII GGCC 5 cut(s) 32, 89, 145, 478, 796
HapII CCGG 4 cut(s) 51, 266, 280, 1199
HhaI GCGC 1 cut(s) 204
Hin1II CATG 2 cut(s) 492, 519
Hin6I GCGC 1 cut(s) 202
HinP1I GCGC 1 cut(s) 202
HinfI GANTC 9 cut(s) 95, 223, 367, 527, 755, 878, 979, 1111, 1214
HpaII CCGG 4 cut(s) 51, 266, 280, 1199
HphI GGTGA 1 cut(s) 256
Hpy166II GTNNAC 1 cut(s) 904
Hpy188I TCNGA 6 cut(s) 295, 621, 679, 774, 785, 1003
Hpy8I GTNNAC 1 cut(s) 904
Hpy99I CGWCG 2 cut(s) 25, 38
HpyAV CCTTC 2 cut(s) 156, 1220
HpyCH4III ACNGT 4 cut(s) 79, 325, 380, 995
HpyCH4IV ACGT 2 cut(s) 636, 722
HpyCH4V TGCA 3 cut(s) 492, 605, 998
HpyF10VI GCNNNNNNNGC 9 cut(s) 51, 80, 110, 116, 471, 631, 640, 923, 1070
HpyF3I CTNAG 3 cut(s) 510, 560, 771
HpySE526I ACGT 2 cut(s) 636, 722
Hsp92II CATG 2 cut(s) 492, 519
HspAI GCGC 1 cut(s) 202
Ksp22I TGATCA 1 cut(s) 448
Kzo9I GATC 9 cut(s) 134, 162, 183, 290, 448, 467, 659, 1101, 1150
LmnI GCTCC 3 cut(s) 275, 731, 934
Lsp1109I GCAGC 4 cut(s) 70, 97, 100, 929
LweI GCATC 5 cut(s) 403, 614, 634, 1007, 1108
MaeI CTAG 4 cut(s) 59, 791, 927, 975
MaeII ACGT 2 cut(s) 636, 722
MaeIII GTNAC 2 cut(s) 325, 821
MalI GATC 9 cut(s) 136, 164, 185, 292, 450, 469, 661, 1103, 1152
MboI GATC 9 cut(s) 134, 162, 183, 290, 448, 467, 659, 1101, 1150
MboII GAAGA 4 cut(s) 317, 388, 515, 884
MflI RGATCY 3 cut(s) 134, 162, 659
MhlI GDGCHC 4 cut(s) 272, 636, 1066, 1128
MluCI AATT 6 cut(s) 15, 346, 406, 710, 735, 760
MlyI GAGTC 3 cut(s) 217, 764, 988
MmeI TCCRAC 1 cut(s) 140
MroXI GAANNNNTTC 1 cut(s) 1218
MseI TTAA 4 cut(s) 639, 705, 741, 944
MslI CAYNNNNRTG 1 cut(s) 1003
MspA1I CMGCKG 1 cut(s) 1166
MspI CCGG 4 cut(s) 51, 266, 280, 1199
MspR9I CCNGG 1 cut(s) 267
Mva1269I GAATGC 1 cut(s) 583
MwoI GCNNNNNNNGC 9 cut(s) 51, 80, 110, 116, 471, 631, 640, 923, 1070
NciI CCSGG 1 cut(s) 267
NdeI CATATG 1 cut(s) 694
NdeII GATC 9 cut(s) 134, 162, 183, 290, 448, 467, 659, 1101, 1150
NheI GCTAGC 1 cut(s) 926
NlaIII CATG 2 cut(s) 492, 519
NlaIV GGNNCC 6 cut(s) 64, 164, 271, 804, 859, 1203
NmeAIII GCCGAG 1 cut(s) 220
NspI RCATGY 1 cut(s) 492
NspV TTCGAA 1 cut(s) 817
PceI AGGCCT 1 cut(s) 478
PctI GAATGC 1 cut(s) 583
PdmI GAANNNNTTC 1 cut(s) 1218
PfeI GAWTC 6 cut(s) 95, 367, 527, 878, 1111, 1214
PflMI CCANNNNNTGG 1 cut(s) 1121
PkrI GCNGC 7 cut(s) 85, 88, 112, 115, 118, 193, 919
Ple19I CGATCG 1 cut(s) 1153
PleI GAGTC 3 cut(s) 217, 763, 987
PpsI GAGTC 3 cut(s) 217, 763, 987
PspFI CCCAGC 2 cut(s) 665, 1121
PspN4I GGNNCC 6 cut(s) 64, 164, 271, 804, 859, 1203
PspPI GGNCC 6 cut(s) 48, 260, 794, 803, 858, 1201
PstNI CAGNNNCTG 1 cut(s) 1121
PsuI RGATCY 3 cut(s) 134, 162, 659
PvuI CGATCG 1 cut(s) 1153
PvuII CAGCTG 1 cut(s) 1166
RsaI GTAC 2 cut(s) 614, 905
RsaNI GTAC 2 cut(s) 613, 904
RseI CAYNNNNRTG 1 cut(s) 1003
SaqAI TTAA 4 cut(s) 639, 705, 741, 944
SatI GCNGC 7 cut(s) 84, 87, 111, 114, 117, 192, 918
Sau3AI GATC 9 cut(s) 134, 162, 183, 290, 448, 467, 659, 1101, 1150
Sau96I GGNCC 6 cut(s) 48, 260, 794, 803, 858, 1201
SchI GAGTC 3 cut(s) 217, 764, 988
ScrFI CCNGG 1 cut(s) 267
SduI GDGCHC 4 cut(s) 272, 636, 1066, 1128
SfaNI GCATC 5 cut(s) 403, 614, 634, 1007, 1108
SfuI TTCGAA 1 cut(s) 817
SinI GGWCC 5 cut(s) 48, 260, 803, 858, 1201
SmiMI CAYNNNNRTG 1 cut(s) 1003
SmlI CTYRAG 2 cut(s) 387, 1065
SmoI CTYRAG 2 cut(s) 387, 1065
Sse9I AATT 6 cut(s) 15, 346, 406, 710, 735, 760
SseBI AGGCCT 1 cut(s) 478
SsiI CCGC 6 cut(s) 86, 116, 192, 263, 465, 930
SspMI CTAG 4 cut(s) 59, 791, 927, 975
StuI AGGCCT 1 cut(s) 478
StyD4I CCNGG 1 cut(s) 265
StyI CCWWGG 2 cut(s) 58, 1057
TaaI ACNGT 4 cut(s) 79, 325, 380, 995
TaiI ACGT 2 cut(s) 639, 725
TaqI TCGA 5 cut(s) 23, 289, 411, 608, 817
TasI AATT 6 cut(s) 15, 346, 406, 710, 735, 760
TauI GCSGC 3 cut(s) 89, 119, 194
TfiI GAWTC 6 cut(s) 95, 367, 527, 878, 1111, 1214
Tru1I TTAA 4 cut(s) 639, 705, 741, 944
Tru9I TTAA 4 cut(s) 639, 705, 741, 944
TscAI CASTG 2 cut(s) 505, 1000
TseI GCWGC 4 cut(s) 83, 110, 113, 917
TspDTI ATGAA 8 cut(s) 17, 318, 511, 576, 663, 1064, 1100, 1126
TspGWI ACGGA 4 cut(s) 88, 146, 387, 698
TspRI CASTG 2 cut(s) 505, 1000
Van91I CCANNNNNTGG 1 cut(s) 1121
VpaK11BI GGWCC 5 cut(s) 48, 260, 803, 858, 1201
XapI RAATTY 3 cut(s) 15, 346, 406
XceI RCATGY 1 cut(s) 492
XmaJI CCTAGG 1 cut(s) 58
XmnI GAANNNNTTC 1 cut(s) 1218
XspI CTAG 4 cut(s) 59, 791, 927, 975
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.