AT4G24480

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0008785
Physical Location & Seq
Forward (+)
12649985 .. 12655097
5113 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G24480.3

Sequence Viewer

Length: 2871 bp
ATGCCTCACCGGACTACTTACTTCTTTCCGCGGCAGTTTCCCGATCGTGGATTCGATTCGTTTTCGCTTAAGAATGATCACGACAAGAAGAAATCGTCGTCTAACGTTGGAGAGAGTTTTGGATTTCAAAGAGATAATAAATCTAATGGAGTCGGAGAAGATTCTAACAAGGAGAAGGAGAGTACTGTGTTCTCCTCTAATCCTCTGCTTTCTAAAAGCTCAGCCGTTTCAGATCTCTTTAGCGATGATCGCAAGTCGGAGAAGAAGCATCAGCAGCAACTAGCCGCTTTCTATGAGTGGTTGGCGGAGAAGAAGGCTAATCTCTCTAGGTCATCATCTACTACTACTACTCATGGACGCGGGGTGAAGCCCACGCGCTTCTCTATGTCTAGCGACGCCGATGAGGAGAGAGAGCTTCTGTTGTCTTCTCCGGCTGATCCCGCTCCGCTTCCTGCTACTTCTTCGCCGGATTCTATCATTGATTCGGCTAGGACGGTTAACATACATGAACGAAACATTGATCGGAGCTTTGACAGAGAGGTTTCGCTTCCCCGAATGTCGAGTGAGAGCAGCTTCGCTGGAAGCTTCTTCTCCGGGACGACGGTGGACGGGAATTTCTCCAATTTCTCAAGTCATACAGACGCAAGGGAAACTTCGACCACCACGCTTGTCTCAGTGAACAAAGAGGAAGAAGAAGTTGAGGTTAGGGAACAGGGCAAAGAGCAAAGCTTAGCGCAGAAGTCAAGAGAAGGCTATTACTTGCAGGTCACGCTTGCTAAGTGGCTAAGTTCTCAAGCAAACCTAGCATGTGAGTCTGTTCATATACAGAGCACAGAATCTATCTCCTACCGTTTTTGGGTAAGTGGTTGTTTATCATACAGTGACAAGATATCAGATGGATTTTACAGTATATTAGGAATGGATCCGTATCTTTGGTTGATGTGTAACAATTCTGAGGATGGCAAACGAATTCCATCTCTTTTGTTACTCAAGGAGACTGAGCCGAATGATACATCAATGGAAGTGGTTTTGATAGATAGACGTGAGGACTCACGTCTTAAAGAACTGGAGGATAAGGCACATGAGCTGTATTGTTCTTCAGACAACATGTTAGTGCTCGTCGAGAAACTTGGCAGACTTGTTGCGGTCTATATGGGGGGGAATTTCCAGGTGGAGCAAGGTGATCTCCAGAAACGATGGAAACTGGTCAGCAATAGACTCAAGGAATTTCGGAAATGTATCATTCTTCCTATAGGTAGTCTAACAATGGGCCTTTGCCGGCATCGTGCCATCCTATTTAAGAAATTGGCTGATTACATAGGTTTACCATGTCGGATAGCTCGAGGTTGCAGATACTGTAAAGAGAGCCACCAATCTTCTTGCCTTGTCAAGATTGACGATGACAGGAAGCTTTCAAGGGAATATGTAGTTGACCTCATCGGGGAACCAGGAAATGTCCATGATCCGGATTCCTCTATCAACGGTGAAACACAGTGTCAGATTCCTTCACCTCTTCAAATGAGTCATCTTACAGATTTTTCCAGGCCTTGCGTGCATAGTACATCTCCTTGTCAGACTGTAGAGTCAAAGACTTCACGCACTCTTTCTGAAAACATTCAACGTTCAGGGAGTCAAGGCCAAGTACACAAAGAATTTGAGTTGCCTGATAACGCAGGGACAGTATGTTGTGCTCATATTGATCAAACTTGCTGTGCAAAAGTATCATCAATGGTTTTGACAGAATCTGTTCTTCGAGCTCTACCACTTGATATACCAAACCTTAGTGAAGAAAAGATTGCCCCACAAGAAACCTGCAAAGAAGAAACCGTTCTATTAGAAGATCCAACAGCTATGAAGCAGCCAAACTTATCAGTTGAACCAGAGATAGTAGAGGCTGACACTCGAAAAGATAAAAAAGGAAGGTTACCTGTTGACGCCATCTCACCTTACTTGACTATTGAACCTTCTTTGGCATCAGATTGGCTGGAGGTCTCATGGAATGAATTACATATCAAAGAGCGTGTGGGTGCTGGATCATTTGGAACTGTTCATCGTGCTGAGTGGCATGGATCAGATGTTGCTGTCAAGATTTTGTCTATTCAAGATTTCCATGATGACCAATTCAGAGAATTTCTCAGAGAGGTATGTAAGCAAGCGGTTGCTATAATGAAACGTGTTCGTCACCCAAATGTTGTTCTCTTCATGGGTGCTGTGACAGAGCGACCCCGGTTATCAATAATAACAGAATATTTGCCAAGAGGCAGTCTTTTTCGCCTTATCCATAGGCCAGCTTCTGGGGAGTTGCTAGATCAGAGGAGGAGGCTACGTATGGCATTGGATGTGGCCAAGGGGCTCAACTACCTACACTGTCTTAATCCTCCTGTAGTGCATTGGGACCTGAAATCTCCAAATCTACTGGTTGATAAGAACTGGACAGTGAAGGTTTGCGATTTTGGACTTTCAAGATTCAAGGCAAACACTTTCATACCATCAAAATCTGTTGCAGGAACACCTGAGTGGATGGCTCCAGAGTTTCTTAGAGGGGAACCGACAAACGAGAAATCAGATGTTTACAGTTTCGGAGTAGTCTTATGGGAGTTGATTACTTTGCAACAGCCTTGGAATGGACTCAGTCCTGCTCAGGTGGTTGGAGCAGTTGCATTCCAGAACAGGCGGCTTATAATTCCTCCCAACACCTCTCCGGTTTTGGTATCTCTAATGGAAGCTTGCTGGGCAGATGAGCCGTCTCAGCGGCCAGCATTTGGTAGTATAGTGGACACATTGAAGAAGCTACTAAAGTCTCCGGTGCAGCTGATCCAAATGGGTGGAGACAAAGGGGTAATTCCAACTAAATCAGCTCCCATACTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

956

Amino Acids

107.21

Weight (kDa)

6.21

Isoelectric Point (pI)

48.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 278 - 486 1.7e-76 EDR1/CTR1/ARMC3, peptidase-like
PK_Tyr_Ser-Thr PF07714 669 - 923 8.2e-63 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 670 - 920 4.1e-50 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2681
AasI GACNNNNNNGTC 1 cut(s) 1582
Acc36I ACCTGC 2 cut(s) 754, 1820
AccB7I CCANNNNNTGG 2 cut(s) 2294, 2762
AccBSI CCGCTC 1 cut(s) 443
AccII CGCG 3 cut(s) 31, 360, 376
AccIII TCCGGA 1 cut(s) 1465
AclI AACGTT 2 cut(s) 105, 1621
AclWI GGATC 8 cut(s) 431, 917, 930, 1457, 1835, 2041, 2077, 2809
AcoI YGGCCR 2 cut(s) 2343, 2753
AcsI RAATTY 6 cut(s) 613, 969, 1162, 1226, 1652, 2129
AcuI CTGAAG 1 cut(s) 1083
AcyI GRCGYC 2 cut(s) 396, 1935
AfaI GTAC 3 cut(s) 184, 1561, 1644
AfiI CCNNNNNNNGG 7 cut(s) 47, 856, 1441, 1465, 2294, 2624, 2762
AflII CTTAAG 1 cut(s) 68
AflIII ACRYGT 2 cut(s) 1107, 2173
AjiI CACGTC 2 cut(s) 1043, 1055
AjnI CCWGG 3 cut(s) 1167, 1447, 1541
AleI CACNNNNGTG 1 cut(s) 2515
Alw21I GWGCWC 4 cut(s) 833, 1119, 1693, 1759
Alw26I GTCTC 6 cut(s) 676, 989, 1996, 2751, 2805, 2823
AlwI GGATC 8 cut(s) 431, 917, 930, 1457, 1835, 2041, 2077, 2809
AlwNI CAGNNNCTG 3 cut(s) 1356, 1745, 2294
Ama87I CYCGRG 1 cut(s) 1341
Aor13HI TCCGGA 1 cut(s) 1465
AoxI GGCC 6 cut(s) 1270, 1544, 1636, 2285, 2343, 2753
ApeKI GCWGC 4 cut(s) 274, 570, 1858, 2809
ApoI RAATTY 6 cut(s) 613, 969, 1162, 1226, 1652, 2129
Asp700I GAANNNNTTC 3 cut(s) 1614, 1746, 1827
AspLEI GCGC 2 cut(s) 378, 736
AspS9I GGNCC 2 cut(s) 1270, 2395
AsuC2I CCSGG 2 cut(s) 595, 2227
AsuHPI GGTGA 6 cut(s) 376, 1193, 1496, 1500, 1935, 2174
AvaI CYCGRG 1 cut(s) 1341
AvaII GGWCC 1 cut(s) 2395
BalI TGGCCA 1 cut(s) 2345
BamHI GGATCC 1 cut(s) 922
BanII GRGCYC 2 cut(s) 1759, 2355
BbsI GAAGAC 1 cut(s) 417
Bbv12I GWGCWC 4 cut(s) 833, 1119, 1693, 1759
BbvI GCAGC 4 cut(s) 286, 582, 1870, 2821
BccI CCATC 8 cut(s) 890, 953, 982, 1191, 1298, 1946, 2497, 2515
BceAI ACGGC 2 cut(s) 209, 2728
BciT130I CCWGG 3 cut(s) 1169, 1449, 1543
BclI TGATCA 2 cut(s) 76, 1699
BcnI CCSGG 2 cut(s) 595, 2227
BcoDI GTCTC 6 cut(s) 676, 989, 1996, 2751, 2805, 2823
BfaI CTAG 6 cut(s) 281, 327, 390, 489, 803, 2306
BfmI CTRYAG 4 cut(s) 1251, 1578, 2382, 2867
BfrI CTTAAG 1 cut(s) 68
BfuAI ACCTGC 2 cut(s) 754, 1820
BglII AGATCT 1 cut(s) 232
BisI GCNGC 8 cut(s) 32, 275, 285, 571, 1859, 2675, 2753, 2810
BlpI GCTNAGC 2 cut(s) 220, 730
BlsI GCNGC 8 cut(s) 33, 276, 286, 572, 1860, 2676, 2754, 2811
BmcAI AGTACT 1 cut(s) 184
Bme1390I CCNGG 5 cut(s) 595, 1169, 1449, 1543, 2227
Bme18I GGWCC 1 cut(s) 2395
BmeT110I CYCGRG 1 cut(s) 1341
BmgBI CACGTC 2 cut(s) 1043, 1055
BmgT120I GGNCC 2 cut(s) 1270, 2395
BmiI GGNNCC 5 cut(s) 924, 1446, 2396, 2526, 2547
BmrFI CCNGG 5 cut(s) 595, 1169, 1449, 1543, 2227
BmsI GCATC 3 cut(s) 277, 1291, 1982
BoxI GACNNNNGTC 1 cut(s) 1053
BpiI GAAGAC 1 cut(s) 417
BplI GAGNNNNNCTC 2 cut(s) 2118, 2150
BpmI CTGGAG 4 cut(s) 1088, 1172, 2006, 2511
Bpu10I CCTNAGC 1 cut(s) 2640
Bpu1102I GCTNAGC 2 cut(s) 220, 730
BpuEI CTTGAG 4 cut(s) 613, 777, 974, 1205
BpuMI CCSGG 2 cut(s) 595, 2227
BsaAI YACGTR 1 cut(s) 2327
BsaBI GATNNNNATC 1 cut(s) 927
BsaHI GRCGYC 2 cut(s) 396, 1935
BsaI GGTCTC 1 cut(s) 1996
BsaJI CCNNGG 4 cut(s) 29, 2225, 2346, 2618
BsaWI WCCGGW 4 cut(s) 9, 1465, 2701, 2803
BsaXI ACNNNNNCTCC 2 cut(s) 2311, 2341
Bsc4I CCNNNNNNNGG 7 cut(s) 47, 856, 1441, 1465, 2294, 2624, 2762
Bse118I RCCGGY 1 cut(s) 1278
Bse1I ACTGG 4 cut(s) 1071, 1209, 2421, 2435
Bse8I GATNNNNATC 1 cut(s) 927
BseAI TCCGGA 1 cut(s) 1465
BseBI CCWGG 3 cut(s) 1169, 1449, 1543
BseDI CCNNGG 4 cut(s) 29, 2225, 2346, 2618
BseGI GGATG 4 cut(s) 964, 1290, 2344, 2526
BseJI GATNNNNATC 1 cut(s) 927
BseLI CCNNNNNNNGG 7 cut(s) 47, 856, 1441, 1465, 2294, 2624, 2762
BseNI ACTGG 4 cut(s) 1071, 1209, 2421, 2435
BseRI GAGGAG 4 cut(s) 184, 419, 2329, 2332
BseXI GCAGC 4 cut(s) 286, 582, 1870, 2821
BseYI CCCAGC 1 cut(s) 2730
BsgI GTGCAG 1 cut(s) 2828
Bsh1236I CGCG 3 cut(s) 31, 360, 376
Bsh1285I CGRYCG 1 cut(s) 46
BshFI GGCC 6 cut(s) 1272, 1546, 1638, 2287, 2345, 2755
BsiEI CGRYCG 1 cut(s) 46
BsiHKAI GWGCWC 4 cut(s) 833, 1119, 1693, 1759
BsiHKCI CYCGRG 1 cut(s) 1341
BsiSI CCGG 9 cut(s) 10, 431, 467, 594, 1279, 1466, 2227, 2702, 2804
BslFI GGGAC 3 cut(s) 610, 1690, 2408
BslI CCNNNNNNNGG 7 cut(s) 47, 856, 1441, 1465, 2294, 2624, 2762
BsmAI GTCTC 6 cut(s) 676, 989, 1996, 2751, 2805, 2823
BsmBI CGTCTC 1 cut(s) 2751
BsmFI GGGAC 3 cut(s) 610, 1690, 2408
BsmI GAATGC 1 cut(s) 2660
BsnI GGCC 6 cut(s) 1272, 1546, 1638, 2287, 2345, 2755
Bso31I GGTCTC 1 cut(s) 1996
BsoBI CYCGRG 1 cut(s) 1341
Bsp1286I GDGCHC 5 cut(s) 833, 1119, 1693, 1759, 2355
Bsp13I TCCGGA 1 cut(s) 1465
Bsp1720I GCTNAGC 2 cut(s) 220, 730
BspANI GGCC 6 cut(s) 1272, 1546, 1638, 2287, 2345, 2755
BspEI TCCGGA 1 cut(s) 1465
BspFNI CGCG 3 cut(s) 31, 360, 376
BspLI GGNNCC 5 cut(s) 924, 1446, 2396, 2526, 2547
BspMI ACCTGC 2 cut(s) 754, 1820
BspPI GGATC 8 cut(s) 431, 917, 930, 1457, 1835, 2041, 2077, 2809
BspTI CTTAAG 1 cut(s) 68
BspTNI GGTCTC 1 cut(s) 1996
BsrBI CCGCTC 1 cut(s) 443
BsrFI RCCGGY 1 cut(s) 1278
BsrI ACTGG 4 cut(s) 1071, 1209, 2421, 2435
BssAI RCCGGY 1 cut(s) 1278
BssECI CCNNGG 4 cut(s) 29, 2225, 2346, 2618
BssNI GRCGYC 2 cut(s) 396, 1935
BssT1I CCWWGG 2 cut(s) 2346, 2618
Bst2UI CCWGG 3 cut(s) 1169, 1449, 1543
Bst6I CTCTTC 2 cut(s) 1518, 2204
BstACI GRCGYC 2 cut(s) 396, 1935
BstAFI CTTAAG 1 cut(s) 68
BstBAI YACGTR 1 cut(s) 2327
BstC8I GCNNGC 7 cut(s) 774, 1280, 1553, 2154, 2289, 2728, 2757
BstDSI CCRYGG 1 cut(s) 29
BstEII GGTNACC 1 cut(s) 1923
BstF5I GGATG 4 cut(s) 964, 1290, 2344, 2526
BstFNI CGCG 3 cut(s) 31, 360, 376
BstHHI GCGC 2 cut(s) 378, 736
BstMAI GTCTC 6 cut(s) 676, 989, 1996, 2751, 2805, 2823
BstMCI CGRYCG 1 cut(s) 46
BstMWI GCNNNNNNNGC 8 cut(s) 249, 274, 440, 769, 803, 1552, 2732, 2749
BstNI CCWGG 3 cut(s) 1169, 1449, 1543
BstNSI RCATGY 2 cut(s) 810, 1111
BstPAI GACNNNNGTC 1 cut(s) 1053
BstPI GGTNACC 1 cut(s) 1923
BstSCI CCNGG 5 cut(s) 593, 1167, 1447, 1541, 2225
BstSFI CTRYAG 4 cut(s) 1251, 1578, 2382, 2867
BstSNI TACGTA 1 cut(s) 2327
BstUI CGCG 3 cut(s) 31, 360, 376
BstV1I GCAGC 4 cut(s) 286, 582, 1870, 2821
BstV2I GAAGAC 1 cut(s) 417
BstX2I RGATCY 3 cut(s) 232, 922, 1840
BstXI CCANNNNNNTGG 1 cut(s) 2825
BstYI RGATCY 3 cut(s) 232, 922, 1840
BsuRI GGCC 6 cut(s) 1272, 1546, 1638, 2287, 2345, 2755
BtgI CCRYGG 1 cut(s) 29
BtgZI GCGATG 1 cut(s) 258
BtrI CACGTC 2 cut(s) 1043, 1055
BtsCI GGATG 4 cut(s) 964, 1290, 2344, 2526
BtsIMutI CAGTG 5 cut(s) 681, 886, 1499, 2365, 2442
BveI ACCTGC 2 cut(s) 754, 1820
Cac8I GCNNGC 7 cut(s) 774, 1280, 1553, 2154, 2289, 2728, 2757
CaiI CAGNNNCTG 3 cut(s) 1356, 1745, 2294
CfoI GCGC 2 cut(s) 378, 736
Cfr10I RCCGGY 1 cut(s) 1278
Cfr13I GGNCC 2 cut(s) 1270, 2395
Cfr42I CCGCGG 1 cut(s) 32
CseI GACGC 4 cut(s) 366, 404, 650, 1943
Csp6I GTAC 3 cut(s) 183, 1560, 1643
CspCI CAANNNNNGTGG 4 cut(s) 649, 684, 1005, 1040
CviQI GTAC 3 cut(s) 183, 1560, 1643
DrdI GACNNNNNNGTC 1 cut(s) 1582
DseDI GACNNNNNNGTC 1 cut(s) 1582
EaeI YGGCCR 2 cut(s) 2343, 2753
Eam1104I CTCTTC 2 cut(s) 1518, 2204
EarI CTCTTC 2 cut(s) 1518, 2204
EciI GGCGGA 1 cut(s) 320
Ecl136II GAGCTC 1 cut(s) 1757
Eco105I TACGTA 1 cut(s) 2327
Eco130I CCWWGG 2 cut(s) 2346, 2618
Eco147I AGGCCT 1 cut(s) 1546
Eco24I GRGCYC 2 cut(s) 1759, 2355
Eco31I GGTCTC 1 cut(s) 1996
Eco32I GATATC 1 cut(s) 891
Eco47I GGWCC 1 cut(s) 2395
Eco53kI GAGCTC 1 cut(s) 1757
Eco57I CTGAAG 1 cut(s) 1083
Eco88I CYCGRG 1 cut(s) 1341
Eco91I GGTNACC 1 cut(s) 1923
EcoICRI GAGCTC 1 cut(s) 1757
EcoO109I RGGNCCY 1 cut(s) 2395
EcoO65I GGTNACC 1 cut(s) 1923
EcoRI GAATTC 1 cut(s) 969
EcoRII CCWGG 3 cut(s) 1167, 1447, 1541
EcoRV GATATC 1 cut(s) 891
EcoT14I CCWWGG 2 cut(s) 2346, 2618
EcoT38I GRGCYC 2 cut(s) 1759, 2355
ErhI CCWWGG 2 cut(s) 2346, 2618
Esp3I CGTCTC 1 cut(s) 2751
FalI AAGNNNNNCTT 2 cut(s) 637, 669
FaqI GGGAC 3 cut(s) 610, 1690, 2408
FauI CCCGC 2 cut(s) 353, 448
FbaI TGATCA 2 cut(s) 76, 1699
Fnu4HI GCNGC 8 cut(s) 32, 275, 285, 571, 1859, 2675, 2753, 2810
FokI GGATG 4 cut(s) 971, 1277, 2351, 2533
FriOI GRGCYC 2 cut(s) 1759, 2355
Fsp4HI GCNGC 8 cut(s) 32, 275, 285, 571, 1859, 2675, 2753, 2810
FspBI CTAG 6 cut(s) 281, 327, 390, 489, 803, 2306
GlaI GCGC 2 cut(s) 377, 735
GluI GCNGC 8 cut(s) 32, 275, 285, 571, 1859, 2675, 2753, 2810
GsaI CCCAGC 1 cut(s) 2734
GsuI CTGGAG 4 cut(s) 1088, 1172, 2006, 2511
HaeIII GGCC 6 cut(s) 1272, 1546, 1638, 2287, 2345, 2755
HapII CCGG 9 cut(s) 10, 431, 467, 594, 1279, 1466, 2227, 2702, 2804
HgaI GACGC 4 cut(s) 366, 404, 650, 1943
HhaI GCGC 2 cut(s) 378, 736
Hin1I GRCGYC 2 cut(s) 396, 1935
Hin6I GCGC 2 cut(s) 376, 734
HinP1I GCGC 2 cut(s) 376, 734
HincII GTYRAC 3 cut(s) 499, 1432, 1933
HindII GTYRAC 3 cut(s) 499, 1432, 1933
HindIII AAGCTT 4 cut(s) 583, 727, 1409, 2724
HpaI GTTAAC 1 cut(s) 499
HpaII CCGG 9 cut(s) 10, 431, 467, 594, 1279, 1466, 2227, 2702, 2804
HphI GGTGA 6 cut(s) 376, 1193, 1496, 1500, 1935, 2174
Hpy166II GTNNAC 9 cut(s) 499, 607, 679, 1325, 1432, 1645, 1933, 2572, 2776
Hpy8I GTNNAC 9 cut(s) 499, 607, 679, 1325, 1432, 1645, 1933, 2572, 2776
Hpy99I CGWCG 4 cut(s) 100, 398, 604, 1124
HpyAV CCTTC 7 cut(s) 169, 307, 743, 1515, 1914, 1974, 2434
HpyCH4IV ACGT 6 cut(s) 105, 1042, 1054, 1621, 2173, 2326
HpyF10VI GCNNNNNNNGC 8 cut(s) 249, 274, 440, 769, 803, 1552, 2732, 2749
HpySE526I ACGT 6 cut(s) 105, 1042, 1054, 1621, 2173, 2326
Hsp92I GRCGYC 2 cut(s) 396, 1935
HspAI GCGC 2 cut(s) 376, 734
Kpn2I TCCGGA 1 cut(s) 1465
KroI GCCGGC 1 cut(s) 1278
KroNI GCCGGC 1 cut(s) 1280
Ksp22I TGATCA 2 cut(s) 76, 1699
KspAI GTTAAC 1 cut(s) 499
KspI CCGCGG 1 cut(s) 32
LmnI GCTCC 6 cut(s) 448, 525, 1174, 2530, 2651, 2863
Lsp1109I GCAGC 4 cut(s) 286, 582, 1870, 2821
LweI GCATC 3 cut(s) 277, 1291, 1982
MaeI CTAG 6 cut(s) 281, 327, 390, 489, 803, 2306
MaeII ACGT 6 cut(s) 105, 1042, 1054, 1621, 2173, 2326
MaeIII GTNAC 7 cut(s) 766, 881, 944, 984, 1923, 2180, 2212
MbiI CCGCTC 1 cut(s) 443
MflI RGATCY 3 cut(s) 232, 922, 1840
MhlI GDGCHC 5 cut(s) 833, 1119, 1693, 1759, 2355
MlsI TGGCCA 1 cut(s) 2345
MluNI TGGCCA 1 cut(s) 2345
MlyI GAGTC 8 cut(s) 159, 821, 1043, 1212, 1531, 1592, 1639, 2622
MmeI TCCRAC 7 cut(s) 88, 133, 237, 1313, 1868, 2629, 2870
Mox20I TGGCCA 1 cut(s) 2345
MroI TCCGGA 1 cut(s) 1465
MroNI GCCGGC 1 cut(s) 1278
MroXI GAANNNNTTC 3 cut(s) 1614, 1746, 1827
MscI TGGCCA 1 cut(s) 2345
MseI TTAA 5 cut(s) 69, 498, 1059, 1299, 2373
MslI CAYNNNNRTG 3 cut(s) 1112, 2187, 2515
Msp20I TGGCCA 1 cut(s) 2345
MspA1I CMGCKG 3 cut(s) 31, 2752, 2812
MspCI CTTAAG 1 cut(s) 68
MspI CCGG 9 cut(s) 10, 431, 467, 594, 1279, 1466, 2227, 2702, 2804
MspR9I CCNGG 5 cut(s) 595, 1169, 1449, 1543, 2227
Mva1269I GAATGC 1 cut(s) 2660
MvaI CCWGG 3 cut(s) 1169, 1449, 1543
MvnI CGCG 3 cut(s) 31, 360, 376
MwoI GCNNNNNNNGC 8 cut(s) 249, 274, 440, 769, 803, 1552, 2732, 2749
NaeI GCCGGC 1 cut(s) 1280
NciI CCSGG 2 cut(s) 595, 2227
NgoMIV GCCGGC 1 cut(s) 1278
NlaIV GGNNCC 5 cut(s) 924, 1446, 2396, 2526, 2547
NmuCI GTSAC 4 cut(s) 766, 881, 2180, 2212
NspI RCATGY 2 cut(s) 810, 1111
OliI CACNNNNGTG 1 cut(s) 2515
PaeR7I CTCGAG 1 cut(s) 1341
PceI AGGCCT 1 cut(s) 1546
PciI ACATGT 1 cut(s) 1107
PcsI WCGNNNNNNNCGW 1 cut(s) 1339
PctI GAATGC 1 cut(s) 2660
PdiI GCCGGC 1 cut(s) 1280
PdmI GAANNNNTTC 3 cut(s) 1614, 1746, 1827
PflFI GACNNNGTC 1 cut(s) 2631
PflMI CCANNNNNTGG 2 cut(s) 2294, 2762
PfoI TCCNGGA 1 cut(s) 593
PkrI GCNGC 8 cut(s) 33, 276, 286, 572, 1860, 2676, 2754, 2811
Ple19I CGATCG 1 cut(s) 46
PleI GAGTC 8 cut(s) 158, 820, 1043, 1212, 1530, 1591, 1638, 2622
PpsI GAGTC 8 cut(s) 158, 820, 1043, 1212, 1530, 1591, 1638, 2622
Ppu21I YACGTR 1 cut(s) 2327
PpuMI RGGWCCY 1 cut(s) 2395
PscI ACATGT 1 cut(s) 1107
PshAI GACNNNNGTC 1 cut(s) 1053
PsiI TTATAA 1 cut(s) 2681
Psp124BI GAGCTC 1 cut(s) 1759
Psp1406I AACGTT 2 cut(s) 105, 1621
Psp5II RGGWCCY 1 cut(s) 2395
Psp6I CCWGG 3 cut(s) 1167, 1447, 1541
PspEI GGTNACC 1 cut(s) 1923
PspFI CCCAGC 1 cut(s) 2730
PspGI CCWGG 3 cut(s) 1167, 1447, 1541
PspN4I GGNNCC 5 cut(s) 924, 1446, 2396, 2526, 2547
PspPI GGNCC 2 cut(s) 1270, 2395
PspPPI RGGWCCY 1 cut(s) 2395
PspXI VCTCGAGB 1 cut(s) 1341
PstNI CAGNNNCTG 3 cut(s) 1356, 1745, 2294
PsuI RGATCY 3 cut(s) 232, 922, 1840
PsyI GACNNNGTC 1 cut(s) 2631
PvuI CGATCG 1 cut(s) 46
PvuII CAGCTG 1 cut(s) 2812
RsaI GTAC 3 cut(s) 184, 1561, 1644
RsaNI GTAC 3 cut(s) 183, 1560, 1643
RseI CAYNNNNRTG 3 cut(s) 1112, 2187, 2515
SacI GAGCTC 1 cut(s) 1759
SacII CCGCGG 1 cut(s) 32
SaqAI TTAA 5 cut(s) 69, 498, 1059, 1299, 2373
SatI GCNGC 8 cut(s) 32, 275, 285, 571, 1859, 2675, 2753, 2810
Sau96I GGNCC 2 cut(s) 1270, 2395
ScaI AGTACT 1 cut(s) 184
SchI GAGTC 8 cut(s) 159, 821, 1043, 1212, 1531, 1592, 1639, 2622
ScrFI CCNGG 5 cut(s) 595, 1169, 1449, 1543, 2227
SduI GDGCHC 5 cut(s) 833, 1119, 1693, 1759, 2355
SfaNI GCATC 3 cut(s) 277, 1291, 1982
SfcI CTRYAG 4 cut(s) 1251, 1578, 2382, 2867
Sfr274I CTCGAG 1 cut(s) 1341
Sfr303I CCGCGG 1 cut(s) 32
SgrBI CCGCGG 1 cut(s) 32
SinI GGWCC 1 cut(s) 2395
SlaI CTCGAG 1 cut(s) 1341
SmiMI CAYNNNNRTG 3 cut(s) 1112, 2187, 2515
SmlI CTYRAG 6 cut(s) 68, 628, 792, 989, 1220, 1341
SmoI CTYRAG 6 cut(s) 68, 628, 792, 989, 1220, 1341
SnaBI TACGTA 1 cut(s) 2327
SseBI AGGCCT 1 cut(s) 1546
SspI AATATT 1 cut(s) 2249
SspMI CTAG 6 cut(s) 281, 327, 390, 489, 803, 2306
SstI GAGCTC 1 cut(s) 1759
StuI AGGCCT 1 cut(s) 1546
StyD4I CCNGG 5 cut(s) 593, 1167, 1447, 1541, 2225
StyI CCWWGG 2 cut(s) 2346, 2618
TaiI ACGT 6 cut(s) 108, 1045, 1057, 1624, 2176, 2329
TaqI TCGA 7 cut(s) 54, 560, 656, 1122, 1342, 1753, 1903
TatI WGTACW 3 cut(s) 182, 1559, 1642
TauI GCSGC 4 cut(s) 34, 287, 2677, 2755
Tru1I TTAA 5 cut(s) 69, 498, 1059, 1299, 2373
Tru9I TTAA 5 cut(s) 69, 498, 1059, 1299, 2373
TscAI CASTG 5 cut(s) 681, 886, 1499, 2372, 2442
TseFI GTSAC 4 cut(s) 766, 881, 2180, 2212
TseI GCWGC 4 cut(s) 274, 570, 1858, 2809
Tsp45I GTSAC 4 cut(s) 766, 881, 2180, 2212
TspDTI ATGAA 8 cut(s) 522, 809, 1868, 2016, 2039, 2183, 2191, 2473
TspGWI ACGGA 1 cut(s) 915
TspRI CASTG 5 cut(s) 681, 886, 1499, 2372, 2442
Tth111I GACNNNGTC 1 cut(s) 2631
Van91I CCANNNNNTGG 2 cut(s) 2294, 2762
Vha464I CTTAAG 1 cut(s) 68
VpaK11BI GGWCC 1 cut(s) 2395
XapI RAATTY 6 cut(s) 613, 969, 1162, 1226, 1652, 2129
XceI RCATGY 2 cut(s) 810, 1111
XhoI CTCGAG 1 cut(s) 1341
XmnI GAANNNNTTC 3 cut(s) 1614, 1746, 1827
XspI CTAG 6 cut(s) 281, 327, 390, 489, 803, 2306
ZrmI AGTACT 1 cut(s) 184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.