Rmu_sc0004637.1_g000003

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004637.1
OG0008785
Physical Location & Seq
Forward (+)
8085 .. 16534
8450 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004637.1_g000003.1.cds

Sequence Viewer

Length: 3501 bp
atgcctcacagaacgacttacttcttcccgaggcaatttccggatcgccgcttcgattcgtgctcttctgccaaacagttggtaccgcaagatagtcatcttcatcatcatctcgagaaacagagcagcggcagcaatgaaaacgtcgtcgtcagcagcatcattgatcaccaccaaaagtctaacaacaacaacaaccacaacagcaccaaattcacagctgtctccgatcagtatttcacgggcggccgaaacaccaccacaagtagtaccagcagcggcgccagcatgcaatccaccaagaagcaacagctggcttccatttgcgactggttcgtcaccgagaaaaagcacaacaacaagcggagaaccaaacccagccaggtgaggaggagcacgagatcgtcgctgccgtcgttctcctgccacgtacccgacgaggatcgcgagctcctgctcaagccagaagccgtcgatgtgtcgtcagcggtgccggatacgacgtcgttcaaggtcgaccggagcgttgaccggaactttgaccggcaggtgtcgctgccgaggctctcaagcgggagtagctacgccgggagcgtgttctccgggacgacgacgctggacgggaacttctccagcgacgtcaaggactcgtcggcgacgacgaggccggtggaggaagaagaggaggaggaggaggtggtaaacccttctcgcctccactcccactcccacctgagagtggaggcgagaagggatagcttggcgcagaggtccaaggagagctactatttgcagctcctattggccaagaggattagcgctcaagctactctcggtagtgagacgttgcttttgcgccacactggctttgaggttaccgatgttgagacggtgtcgtatcgcctctgggttagtggctgcttgtcttacaatgagaaaatatcggatggtttctacaatattttggggatgaatccgtatctatgggtgatgtgcaatgatgtggaagaaggtaaacgtctaccatcgctgatgtcacttagagcaattaaacccgcagagacatcaatggaggtggttcttgttgacaaacatggggactctcgcctcaaggaacttcaagataaggcacaagaactttattgtgcttcagagaatgccttggtgttggtggagaaacttggcaagcttgtcgccatctacatggggggtacttatcctgtggagcaaggagatctccacatgcgctggaaagtggttagcaagagattgagggaattccaaaagtgtattgtgctccccattggcagcctatcaatggggctctgcaggcatcgtgcaattctcttcaagaaattggcagactacataggtttaccttgccggatagctcgtggttgcaagtattgtgtggcagatcataggtcttcttgtcttgttaaaattgaagacaggcagcttgtgagggaatatgtggttgatctagttggggaacccggaaatgtccatggcccagattcctcgatcaatggatctctgtcttcaatatcttcaccatttcaaatttctcagcaaaaagagttccaacgaatttatagggatagtggattatgttcccaaattataaactcaaagcacactcgtccagctcctgaagatcctctgtatccaggctacagagaggaaagccaggtcctgaaagatagtagtttgcttccagttgatcaaactagatttgggatggaagcttctgtaatgcctttggacttgaaagcgaatgcggagcattgccttctccagacaccaatgccaccttgtttacaaggtgatatttccgaagctgttgatgtgggagctgccattgcatcattagaggaatgtgctagactaggtgaagaaagtattattgtacagcaagcttaccggaaggagattgttgtgtcaagaagtggagtaatatgtagcagtgacaagtccagtcaatcagatctagaggaggttgacagtaagcttgaaattcaaaaccgattttctgctgtcactgttcctaggtacttgaatctcgaaccatctcttgctatggactggcttgagatcgcatgggatgagttgcatatcaaagagcgcgttggtgctggctcatttggaactgtgcatcgtgctgaatggcatggatcggatgtagctgtcaaggttttaactgttcaagatttccatgatgatcagttgagggaatttttgcgcgaggttgcaattatgaaacgtgtccgccatcccaatgtagttctgttcatgggtgcagttacaaagcgtccacatctctcaatagtgacagagtatttacctaggggtagtctatatcgactcatacacaggccagcttctggggaacttctggatcatagacggcggctgcgcatggcattagatgtggccaaggggatcaattacctccattgtcttagccctcctattgtccattgggatcttaaatctccaaatttgttggttgataaaaattggacagcgaaggtatgcgattttgggttgtccaggttcaaagcaaacactttcatatcatcgaaatctgttgctggaacacctgagtggatggctccagagttccttcgcggagagccctcaaatgagaagtctgatgtctacagtttcggagtaatcctttgggaacttgtgaccatgcaacaaccttggagtgggcttagtcctgcgcagaacagaaggcttgctatcccagcaaatactcccccaatgttggcttctcttatggaatcctgctgggccgatgaccctgctcagcgcccaacatttaaaagtatagtggagtcgctgaagaagttgctaaaatctcctctgcagtgggcacaggatttttgtcagtctctccatcaaatgtgcgccaagttttggtggggtagtaagacggaaaacaagaaaattcattggttgtcctgggaggatttatgtaagcccaaagaagcaggagggatgggttttcatgatttgtatgctcacaacttagcactttcatctaaacagggttggcgattaatgcgttactcagattctcttcttggtcgtctctacaaggcgaagtactttcctagtggcgatatttggagtgcatcactaacatcttcaccttcctcttgttggaggggtatttatgaagcaagacctttctctttccatcctattattagacaagagggtgctcctactcttgtgaaagaactgcttctaccaggtttgtcttggaataccaccttgatagctcgttggtttgaaccagaagatgcttctctaatatgttctatttccttaagtcaacgagctgtttcggatcggttgatctggcattttgatgcgaaagggagattcactaccaaaagtgcctataagcttgctattcaactaaatcacgttgatattccttctgcttctaacccttcccagtatgtagacacttggaagcgtatttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

1166

Amino Acids

131.63

Weight (kDa)

8.39

Isoelectric Point (pI)

50.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1625
AarI CACCTGC 1 cut(s) 538
AasI GACNNNNNNGTC 1 cut(s) 335
AatII GACGTC 2 cut(s) 506, 642
Acc16I TGCGCA 2 cut(s) 2417, 2730
Acc36I ACCTGC 1 cut(s) 538
Acc65I GGTACC 1 cut(s) 82
AccB1I GGYRCC 3 cut(s) 82, 281, 490
AccB7I CCANNNNNTGG 2 cut(s) 2384, 2925
AccI GTMKAC 4 cut(s) 516, 1021, 2661, 3480
AccII CGCG 4 cut(s) 447, 2127, 2244, 2631
AccIII TCCGGA 1 cut(s) 40
AclWI GGATC 9 cut(s) 51, 450, 1540, 1652, 2182, 2406, 2450, 2493, 3369
AcoI YGGCCR 3 cut(s) 247, 804, 2433
AcsI RAATTY 8 cut(s) 212, 1277, 1563, 1590, 2016, 2234, 2500, 2955
AcuI CTGAAG 3 cut(s) 1134, 1674, 2870
AcyI GRCGYC 3 cut(s) 282, 503, 639
AfaI GTAC 7 cut(s) 84, 271, 432, 1213, 1911, 2054, 3116
AfeI AGCGCT 1 cut(s) 820
AfiI CCNNNNNNNGG 7 cut(s) 739, 1318, 2384, 2714, 2773, 2925, 3171
AflII CTTAAG 1 cut(s) 3340
AflIII ACRYGT 1 cut(s) 2263
AjnI CCWGG 6 cut(s) 381, 1669, 1689, 2552, 2969, 3262
AjuI GAANNNNNNNTTGG 2 cut(s) 2761, 2793
AleI CACNNNNGTG 1 cut(s) 2605
Alw21I GWGCWC 5 cut(s) 65, 398, 453, 1299, 3235
Alw26I GTCTC 6 cut(s) 229, 836, 881, 1055, 2904, 3104
AlwI GGATC 9 cut(s) 51, 450, 1540, 1652, 2182, 2406, 2450, 2493, 3369
AlwNI CAGNNNCTG 3 cut(s) 1652, 1696, 2384
Ama87I CYCGRG 2 cut(s) 28, 113
Aor13HI TCCGGA 1 cut(s) 40
Aor51HI AGCGCT 1 cut(s) 820
AoxI GGCC 7 cut(s) 247, 665, 804, 1510, 2375, 2433, 2799
ApoI RAATTY 8 cut(s) 212, 1277, 1563, 1590, 2016, 2234, 2500, 2955
ArsI GACNNNNNNTTYG 6 cut(s) 521, 553, 835, 867, 2636, 2668
AseI ATTAAT 1 cut(s) 3068
Asp700I GAANNNNTTC 1 cut(s) 3255
Asp718I GGTACC 1 cut(s) 82
AspA2I CCTAGG 2 cut(s) 2048, 2345
AspS9I GGNCC 4 cut(s) 771, 1511, 1693, 2799
AsuC2I CCSGG 3 cut(s) 589, 604, 1497
AsuHPI GGTGA 8 cut(s) 161, 331, 397, 1000, 1545, 1838, 1904, 3150
AvaI CYCGRG 2 cut(s) 28, 113
AvaII GGWCC 2 cut(s) 771, 1693
AvrII CCTAGG 2 cut(s) 2048, 2345
BaeGI GKGCMC 1 cut(s) 2884
BalI TGGCCA 2 cut(s) 806, 2435
BanI GGYRCC 3 cut(s) 82, 281, 490
BanII GRGCYC 3 cut(s) 453, 1326, 2640
BauI CACGAG 2 cut(s) 397, 1392
BbsI GAAGAC 3 cut(s) 1419, 1455, 1533
Bbv12I GWGCWC 5 cut(s) 65, 398, 453, 1299, 3235
BceAI ACGGC 3 cut(s) 397, 455, 2423
BcgI CGANNNNNNTGC 4 cut(s) 1174, 1208, 2792, 2826
BciT130I CCWGG 6 cut(s) 383, 1671, 1691, 2554, 2971, 3264
BciVI GTATCC 2 cut(s) 490, 1677
BclI TGATCA 3 cut(s) 166, 1723, 2221
BcnI CCSGG 3 cut(s) 589, 604, 1497
BcoDI GTCTC 6 cut(s) 229, 836, 881, 1055, 2904, 3104
BfaI CTAG 8 cut(s) 1484, 1731, 1884, 1889, 1991, 2049, 2346, 3123
BfmI CTRYAG 4 cut(s) 1327, 1675, 2662, 2873
BfoI RGCGCY 3 cut(s) 285, 822, 2821
BfrI CTTAAG 1 cut(s) 3340
BfuAI ACCTGC 1 cut(s) 538
BfuI GTATCC 2 cut(s) 490, 1677
BglI GCCNNNNNGGC 1 cut(s) 864
BglII AGATCT 2 cut(s) 1234, 1987
BlnI CCTAGG 2 cut(s) 2048, 2345
BlpI GCTNAGC 1 cut(s) 2814
BmcAI AGTACT 1 cut(s) 3116
Bme1390I CCNGG 9 cut(s) 383, 589, 604, 1497, 1671, 1691, 2554, 2971, 3264
Bme18I GGWCC 2 cut(s) 771, 1693
BmeT110I CYCGRG 2 cut(s) 28, 113
BmgT120I GGNCC 4 cut(s) 771, 1511, 1693, 2799
BmiI GGNNCC 5 cut(s) 84, 283, 492, 1494, 2616
BmrFI CCNGG 9 cut(s) 383, 589, 604, 1497, 1671, 1691, 2554, 2971, 3264
BmrI ACTGGG 1 cut(s) 3466
BmsI GCATC 7 cut(s) 168, 1342, 1874, 2164, 3152, 3304, 3373
BmuI ACTGGG 1 cut(s) 3466
BpiI GAAGAC 3 cut(s) 1419, 1455, 1533
BpmI CTGGAG 3 cut(s) 616, 1781, 2601
Bpu1102I GCTNAGC 1 cut(s) 2814
BpuEI CTTGAG 5 cut(s) 443, 553, 807, 1094, 2111
BpuMI CCSGG 3 cut(s) 589, 604, 1497
BsaAI YACGTR 1 cut(s) 430
BsaBI GATNNNNATC 1 cut(s) 96
BsaHI GRCGYC 3 cut(s) 282, 503, 639
BsaWI WCCGGW 4 cut(s) 40, 519, 531, 1923
BsaXI ACNNNNNCTCC 2 cut(s) 710, 740
Bsc4I CCNNNNNNNGG 7 cut(s) 739, 1318, 2384, 2714, 2773, 2925, 3171
Bse118I RCCGGY 2 cut(s) 543, 667
Bse1I ACTGG 6 cut(s) 335, 868, 1718, 1977, 2090, 3472
Bse3DI GCAATG 4 cut(s) 142, 1003, 1786, 1860
Bse8I GATNNNNATC 1 cut(s) 96
BseAI TCCGGA 1 cut(s) 40
BseBI CCWGG 6 cut(s) 383, 1671, 1691, 2554, 2971, 3264
BseGI GGATG 9 cut(s) 952, 975, 1746, 2110, 2185, 2272, 2616, 3012, 3208
BseJI GATNNNNATC 1 cut(s) 96
BseLI CCNNNNNNNGG 7 cut(s) 739, 1318, 2384, 2714, 2773, 2925, 3171
BseMI GCAATG 4 cut(s) 142, 1003, 1786, 1860
BseMII CTCAG 5 cut(s) 725, 1583, 2595, 2828, 3093
BseNI ACTGG 6 cut(s) 335, 868, 1718, 1977, 2090, 3472
BseRI GAGGAG 8 cut(s) 403, 406, 698, 701, 704, 707, 2009, 2859
BseSI GKGCMC 1 cut(s) 2884
BseX3I CGGCCG 1 cut(s) 247
BseYI CCCAGC 3 cut(s) 377, 2752, 2796
BsgI GTGCAG 1 cut(s) 2319
Bsh1236I CGCG 4 cut(s) 447, 2127, 2244, 2631
Bsh1285I CGRYCG 2 cut(s) 250, 520
BshFI GGCC 7 cut(s) 249, 667, 806, 1512, 2377, 2435, 2801
BshNI GGYRCC 3 cut(s) 82, 281, 490
BsiEI CGRYCG 2 cut(s) 250, 520
BsiHKAI GWGCWC 5 cut(s) 65, 398, 453, 1299, 3235
BsiHKCI CYCGRG 2 cut(s) 28, 113
BslFI GGGAC 2 cut(s) 619, 1112
BslI CCNNNNNNNGG 7 cut(s) 739, 1318, 2384, 2714, 2773, 2925, 3171
BsmAI GTCTC 6 cut(s) 229, 836, 881, 1055, 2904, 3104
BsmBI CGTCTC 3 cut(s) 836, 881, 3104
BsmFI GGGAC 2 cut(s) 619, 1112
BsmI GAATGC 2 cut(s) 1162, 1783
BsnI GGCC 7 cut(s) 249, 667, 806, 1512, 2377, 2435, 2801
BsoBI CYCGRG 2 cut(s) 28, 113
Bsp1286I GDGCHC 8 cut(s) 65, 398, 453, 1299, 1326, 2640, 2884, 3235
Bsp13I TCCGGA 1 cut(s) 40
Bsp1407I TGTACA 1 cut(s) 1909
Bsp1720I GCTNAGC 1 cut(s) 2814
Bsp19I CCATGG 1 cut(s) 1507
Bsp68I TCGCGA 1 cut(s) 447
BspANI GGCC 7 cut(s) 249, 667, 806, 1512, 2377, 2435, 2801
BspCNI CTCAG 5 cut(s) 726, 1582, 2596, 2827, 3092
BspEI TCCGGA 1 cut(s) 40
BspFNI CGCG 4 cut(s) 447, 2127, 2244, 2631
BspHI TCATGA 1 cut(s) 3016
BspLI GGNNCC 5 cut(s) 84, 283, 492, 1494, 2616
BspMAI CTGCAG 2 cut(s) 1331, 2877
BspMI ACCTGC 1 cut(s) 538
BspPI GGATC 9 cut(s) 51, 450, 1540, 1652, 2182, 2406, 2450, 2493, 3369
BspQI GCTCTTC 1 cut(s) 70
BspT107I GGYRCC 3 cut(s) 82, 281, 490
BspTI CTTAAG 1 cut(s) 3340
BsrDI GCAATG 4 cut(s) 142, 1003, 1786, 1860
BsrFI RCCGGY 2 cut(s) 543, 667
BsrGI TGTACA 1 cut(s) 1909
BsrI ACTGG 6 cut(s) 335, 868, 1718, 1977, 2090, 3472
BssAI RCCGGY 2 cut(s) 543, 667
BssNI GRCGYC 3 cut(s) 282, 503, 639
BssSI CACGAG 2 cut(s) 397, 1392
BssT1I CCWWGG 7 cut(s) 774, 1161, 1507, 2048, 2345, 2436, 2708
Bst2BI CACGAG 2 cut(s) 397, 1392
Bst2UI CCWGG 6 cut(s) 383, 1671, 1691, 2554, 2971, 3264
Bst4CI ACNGT 7 cut(s) 78, 892, 2006, 2044, 2152, 2203, 2666
Bst6I CTCTTC 4 cut(s) 70, 675, 1352, 3093
BstACI GRCGYC 3 cut(s) 282, 503, 639
BstAFI CTTAAG 1 cut(s) 3340
BstAUI TGTACA 1 cut(s) 1909
BstBAI YACGTR 1 cut(s) 430
BstDEI CTNAG 9 cut(s) 734, 1040, 1569, 2462, 2604, 2720, 2814, 3037, 3079
BstDSI CCRYGG 1 cut(s) 1507
BstEII GGTNACC 1 cut(s) 874
BstF5I GGATG 9 cut(s) 952, 975, 1746, 2110, 2185, 2272, 2616, 3012, 3208
BstFNI CGCG 4 cut(s) 447, 2127, 2244, 2631
BstH2I RGCGCY 3 cut(s) 285, 822, 2821
BstMAI GTCTC 6 cut(s) 229, 836, 881, 1055, 2904, 3104
BstMCI CGRYCG 2 cut(s) 250, 520
BstNI CCWGG 6 cut(s) 383, 1671, 1691, 2554, 2971, 3264
BstNSI RCATGY 2 cut(s) 292, 1246
BstPI GGTNACC 1 cut(s) 874
BstSCI CCNGG 9 cut(s) 381, 587, 602, 1495, 1669, 1689, 2552, 2969, 3262
BstSFI CTRYAG 4 cut(s) 1327, 1675, 2662, 2873
BstSLI GKGCMC 1 cut(s) 2884
BstUI CGCG 4 cut(s) 447, 2127, 2244, 2631
BstV2I GAAGAC 3 cut(s) 1419, 1455, 1533
BstX2I RGATCY 5 cut(s) 1234, 1532, 1657, 1987, 2485
BstXI CCANNNNNNTGG 2 cut(s) 79, 1204
BstYI RGATCY 5 cut(s) 1234, 1532, 1657, 1987, 2485
BstZI CGGCCG 1 cut(s) 247
BsuI GTATCC 2 cut(s) 490, 1677
BsuRI GGCC 7 cut(s) 249, 667, 806, 1512, 2377, 2435, 2801
BtgI CCRYGG 1 cut(s) 1507
BtgZI GCGATG 1 cut(s) 1011
BtsCI GGATG 9 cut(s) 952, 975, 1746, 2110, 2185, 2272, 2616, 3012, 3208
BtsI GCAGTG 2 cut(s) 1972, 2882
BtsIMutI CAGTG 4 cut(s) 861, 1972, 2040, 2882
BtuMI TCGCGA 1 cut(s) 447
BveI ACCTGC 1 cut(s) 538
CaiI CAGNNNCTG 3 cut(s) 1652, 1696, 2384
CciI TCATGA 1 cut(s) 3016
Cfr10I RCCGGY 2 cut(s) 543, 667
Cfr13I GGNCC 4 cut(s) 771, 1511, 1693, 2799
CseI GACGC 2 cut(s) 622, 2300
CsiI ACCWGGT 1 cut(s) 3262
Csp6I GTAC 7 cut(s) 83, 270, 431, 1212, 1910, 2053, 3115
CspCI CAANNNNNGTGG 2 cut(s) 1056, 1091
CviQI GTAC 7 cut(s) 83, 270, 431, 1212, 1910, 2053, 3115
DdeI CTNAG 9 cut(s) 734, 1040, 1569, 2462, 2604, 2720, 2814, 3037, 3079
DinI GGCGCC 1 cut(s) 283
DraI TTTAAA 1 cut(s) 2830
DrdI GACNNNNNNGTC 1 cut(s) 335
DseDI GACNNNNNNGTC 1 cut(s) 335
EaeI YGGCCR 3 cut(s) 247, 804, 2433
EagI CGGCCG 1 cut(s) 247
Eam1104I CTCTTC 4 cut(s) 70, 675, 1352, 3093
EarI CTCTTC 4 cut(s) 70, 675, 1352, 3093
EciI GGCGGA 1 cut(s) 2258
Ecl136II GAGCTC 1 cut(s) 451
EclXI CGGCCG 1 cut(s) 247
Eco130I CCWWGG 7 cut(s) 774, 1161, 1507, 2048, 2345, 2436, 2708
Eco24I GRGCYC 3 cut(s) 453, 1326, 2640
Eco47I GGWCC 2 cut(s) 771, 1693
Eco47III AGCGCT 1 cut(s) 820
Eco52I CGGCCG 1 cut(s) 247
Eco53kI GAGCTC 1 cut(s) 451
Eco57I CTGAAG 3 cut(s) 1134, 1674, 2870
Eco88I CYCGRG 2 cut(s) 28, 113
Eco91I GGTNACC 1 cut(s) 874
EcoICRI GAGCTC 1 cut(s) 451
EcoO109I RGGNCCY 1 cut(s) 1693
EcoO65I GGTNACC 1 cut(s) 874
EcoRI GAATTC 1 cut(s) 1277
EcoRII CCWGG 6 cut(s) 381, 1669, 1689, 2552, 2969, 3262
EcoT14I CCWWGG 7 cut(s) 774, 1161, 1507, 2048, 2345, 2436, 2708
EcoT38I GRGCYC 3 cut(s) 453, 1326, 2640
EgeI GGCGCC 1 cut(s) 283
EheI GGCGCC 1 cut(s) 283
ErhI CCWWGG 7 cut(s) 774, 1161, 1507, 2048, 2345, 2436, 2708
Esp3I CGTCTC 3 cut(s) 836, 881, 3104
FalI AAGNNNNNCTT 2 cut(s) 3240, 3272
FaqI GGGAC 2 cut(s) 619, 1112
FauI CCCGC 2 cut(s) 566, 1063
FbaI TGATCA 3 cut(s) 166, 1723, 2221
FblI GTMKAC 4 cut(s) 516, 1021, 2661, 3480
FokI GGATG 9 cut(s) 959, 982, 1753, 2117, 2192, 2259, 2623, 3019, 3195
FriOI GRGCYC 3 cut(s) 453, 1326, 2640
FspBI CTAG 8 cut(s) 1484, 1731, 1884, 1889, 1991, 2049, 2346, 3123
FspI TGCGCA 2 cut(s) 2417, 2730
GsaI CCCAGC 3 cut(s) 381, 2756, 2800
GsuI CTGGAG 3 cut(s) 616, 1781, 2601
HaeII RGCGCY 3 cut(s) 285, 822, 2821
HaeIII GGCC 7 cut(s) 249, 667, 806, 1512, 2377, 2435, 2801
HgaI GACGC 2 cut(s) 622, 2300
Hin1I GRCGYC 3 cut(s) 282, 503, 639
HincII GTYRAC 5 cut(s) 517, 529, 1087, 2002, 3347
HindII GTYRAC 5 cut(s) 517, 529, 1087, 2002, 3347
HindIII AAGCTT 5 cut(s) 1187, 1746, 1917, 2009, 3419
HphI GGTGA 8 cut(s) 161, 331, 397, 1000, 1545, 1838, 1904, 3150
HpyCH4III ACNGT 7 cut(s) 78, 892, 2006, 2044, 2152, 2203, 2666
HpyCH4IV ACGT 8 cut(s) 144, 429, 503, 639, 845, 1018, 2263, 3441
HpyF3I CTNAG 9 cut(s) 734, 1040, 1569, 2462, 2604, 2720, 2814, 3037, 3079
HpySE526I ACGT 8 cut(s) 144, 429, 503, 639, 845, 1018, 2263, 3441
Hsp92I GRCGYC 3 cut(s) 282, 503, 639
KasI GGCGCC 1 cut(s) 281
Kpn2I TCCGGA 1 cut(s) 40
KpnI GGTACC 1 cut(s) 86
Ksp22I TGATCA 3 cut(s) 166, 1723, 2221
LguI GCTCTTC 1 cut(s) 70
LweI GCATC 7 cut(s) 168, 1342, 1874, 2164, 3152, 3304, 3373
MabI ACCWGGT 1 cut(s) 3262
MaeI CTAG 8 cut(s) 1484, 1731, 1884, 1889, 1991, 2049, 2346, 3123
MaeII ACGT 8 cut(s) 144, 429, 503, 639, 845, 1018, 2263, 3441
MaeIII GTNAC 9 cut(s) 337, 874, 1035, 1967, 2038, 2302, 2329, 2692, 3074
MflI RGATCY 5 cut(s) 1234, 1532, 1657, 1987, 2485
MhlI GDGCHC 8 cut(s) 65, 398, 453, 1299, 1326, 2640, 2884, 3235
MlsI TGGCCA 2 cut(s) 806, 2435
MluNI TGGCCA 2 cut(s) 806, 2435
Mly113I GGCGCC 1 cut(s) 282
MlyI GAGTC 4 cut(s) 641, 1094, 2358, 2852
MmeI TCCRAC 2 cut(s) 1609, 3152
Mox20I TGGCCA 2 cut(s) 806, 2435
MroI TCCGGA 1 cut(s) 40
MroXI GAANNNNTTC 1 cut(s) 3255
MscI TGGCCA 2 cut(s) 806, 2435
MseI TTAA 7 cut(s) 1050, 1440, 2198, 2490, 2829, 3068, 3341
MslI CAYNNNNRTG 4 cut(s) 1202, 2277, 2605, 3381
Msp20I TGGCCA 2 cut(s) 806, 2435
MspA1I CMGCKG 5 cut(s) 129, 221, 279, 313, 488
MspCI CTTAAG 1 cut(s) 3340
MspR9I CCNGG 9 cut(s) 383, 589, 604, 1497, 1671, 1691, 2554, 2971, 3264
Mva1269I GAATGC 2 cut(s) 1162, 1783
MvaI CCWGG 6 cut(s) 383, 1671, 1691, 2554, 2971, 3264
MvnI CGCG 4 cut(s) 447, 2127, 2244, 2631
NarI GGCGCC 1 cut(s) 282
NciI CCSGG 3 cut(s) 589, 604, 1497
NcoI CCATGG 1 cut(s) 1507
NlaIV GGNNCC 5 cut(s) 84, 283, 492, 1494, 2616
NmeAIII GCCGAG 1 cut(s) 585
NmuCI GTSAC 6 cut(s) 337, 1035, 1967, 2038, 2329, 2692
NruI TCGCGA 1 cut(s) 447
NsbI TGCGCA 2 cut(s) 2417, 2730
NspI RCATGY 2 cut(s) 292, 1246
OliI CACNNNNGTG 1 cut(s) 2605
PaeI GCATGC 1 cut(s) 292
PaeR7I CTCGAG 1 cut(s) 113
PagI TCATGA 1 cut(s) 3016
PaqCI CACCTGC 1 cut(s) 538
PciSI GCTCTTC 1 cut(s) 70
PcsI WCGNNNNNNNCGW 8 cut(s) 410, 413, 435, 444, 522, 591, 656, 659
PctI GAATGC 2 cut(s) 1162, 1783
PdmI GAANNNNTTC 1 cut(s) 3255
PfeI GAWTC 7 cut(s) 56, 973, 1517, 2059, 2789, 3083, 3396
PflFI GACNNNGTC 1 cut(s) 892
PflMI CCANNNNNTGG 2 cut(s) 2384, 2925
PfoI TCCNGGA 1 cut(s) 602
PleI GAGTC 4 cut(s) 641, 1094, 2358, 2851
PluTI GGCGCC 1 cut(s) 285
PpsI GAGTC 4 cut(s) 641, 1094, 2358, 2851
Ppu21I YACGTR 1 cut(s) 430
PpuMI RGGWCCY 1 cut(s) 1693
PshBI ATTAAT 1 cut(s) 3068
PsiI TTATAA 1 cut(s) 1625
Psp124BI GAGCTC 1 cut(s) 453
Psp5II RGGWCCY 1 cut(s) 1693
Psp6I CCWGG 6 cut(s) 381, 1669, 1689, 2552, 2969, 3262
PspEI GGTNACC 1 cut(s) 874
PspFI CCCAGC 3 cut(s) 377, 2752, 2796
PspGI CCWGG 6 cut(s) 381, 1669, 1689, 2552, 2969, 3262
PspN4I GGNNCC 5 cut(s) 84, 283, 492, 1494, 2616
PspPI GGNCC 4 cut(s) 771, 1511, 1693, 2799
PspPPI RGGWCCY 1 cut(s) 1693
PsrI GAACNNNNNNTAC 2 cut(s) 3243, 3275
PstI CTGCAG 2 cut(s) 1331, 2877
PstNI CAGNNNCTG 3 cut(s) 1652, 1696, 2384
PsuI RGATCY 5 cut(s) 1234, 1532, 1657, 1987, 2485
PsyI GACNNNGTC 1 cut(s) 892
PvuII CAGCTG 2 cut(s) 221, 313
RruI TCGCGA 1 cut(s) 447
RsaI GTAC 7 cut(s) 84, 271, 432, 1213, 1911, 2054, 3116
RsaNI GTAC 7 cut(s) 83, 270, 431, 1212, 1910, 2053, 3115
RseI CAYNNNNRTG 4 cut(s) 1202, 2277, 2605, 3381
SacI GAGCTC 1 cut(s) 453
SalI GTCGAC 1 cut(s) 515
SapI GCTCTTC 1 cut(s) 70
SaqAI TTAA 7 cut(s) 1050, 1440, 2198, 2490, 2829, 3068, 3341
Sau96I GGNCC 4 cut(s) 771, 1511, 1693, 2799
ScaI AGTACT 1 cut(s) 3116
SchI GAGTC 4 cut(s) 641, 1094, 2358, 2852
ScrFI CCNGG 9 cut(s) 383, 589, 604, 1497, 1671, 1691, 2554, 2971, 3264
SduI GDGCHC 8 cut(s) 65, 398, 453, 1299, 1326, 2640, 2884, 3235
SexAI ACCWGGT 1 cut(s) 3262
SfaNI GCATC 7 cut(s) 168, 1342, 1874, 2164, 3152, 3304, 3373
SfcI CTRYAG 4 cut(s) 1327, 1675, 2662, 2873
SfoI GGCGCC 1 cut(s) 283
Sfr274I CTCGAG 1 cut(s) 113
SinI GGWCC 2 cut(s) 771, 1693
SlaI CTCGAG 1 cut(s) 113
SmiMI CAYNNNNRTG 4 cut(s) 1202, 2277, 2605, 3381
SmlI CTYRAG 7 cut(s) 113, 458, 568, 822, 1109, 2090, 3340
SmoI CTYRAG 7 cut(s) 113, 458, 568, 822, 1109, 2090, 3340
SphI GCATGC 1 cut(s) 292
SspDI GGCGCC 1 cut(s) 281
SspI AATATT 1 cut(s) 961
SspMI CTAG 8 cut(s) 1484, 1731, 1884, 1889, 1991, 2049, 2346, 3123
SstI GAGCTC 1 cut(s) 453
StyD4I CCNGG 9 cut(s) 381, 587, 602, 1495, 1669, 1689, 2552, 2969, 3262
StyI CCWWGG 7 cut(s) 774, 1161, 1507, 2048, 2345, 2436, 2708
TaaI ACNGT 7 cut(s) 78, 892, 2006, 2044, 2152, 2203, 2666
TaiI ACGT 8 cut(s) 147, 432, 506, 642, 848, 1021, 2266, 3444
TaqI TCGA 8 cut(s) 54, 114, 474, 516, 1523, 2064, 2362, 2582
TatI WGTACW 2 cut(s) 1909, 3114
TauI GCSGC 5 cut(s) 51, 132, 249, 282, 2413
TfiI GAWTC 7 cut(s) 56, 973, 1517, 2059, 2789, 3083, 3396
Tru1I TTAA 7 cut(s) 1050, 1440, 2198, 2490, 2829, 3068, 3341
Tru9I TTAA 7 cut(s) 1050, 1440, 2198, 2490, 2829, 3068, 3341
TscAI CASTG 4 cut(s) 868, 1972, 2047, 2882
TseFI GTSAC 6 cut(s) 337, 1035, 1967, 2038, 2329, 2692
Tsp45I GTSAC 6 cut(s) 337, 1035, 1967, 2038, 2329, 2692
TspGWI ACGGA 2 cut(s) 966, 2957
TspRI CASTG 4 cut(s) 868, 1972, 2047, 2882
Tth111I GACNNNGTC 1 cut(s) 892
Van91I CCANNNNNTGG 2 cut(s) 2384, 2925
Vha464I CTTAAG 1 cut(s) 3340
VpaK11BI GGWCC 2 cut(s) 771, 1693
VspI ATTAAT 1 cut(s) 3068
XapI RAATTY 8 cut(s) 212, 1277, 1563, 1590, 2016, 2234, 2500, 2955
XbaI TCTAGA 1 cut(s) 1990
XceI RCATGY 2 cut(s) 292, 1246
XcmI CCANNNNNNNNNTGG 1 cut(s) 3270
XhoI CTCGAG 1 cut(s) 113
XmaJI CCTAGG 2 cut(s) 2048, 2345
XmiI GTMKAC 4 cut(s) 516, 1021, 2661, 3480
XmnI GAANNNNTTC 1 cut(s) 3255
XspI CTAG 8 cut(s) 1484, 1731, 1884, 1889, 1991, 2049, 2346, 3123
ZraI GACGTC 2 cut(s) 504, 640
ZrmI AGTACT 1 cut(s) 3116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.