Rh7AG444000

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0008785
Physical Location & Seq
Forward (+)
60300314 .. 60308053
7740 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG444000.1

Sequence Viewer

Length: 2916 bp
ATGCCTCACAGAACGACTTACTTCTTCCCGAGGCAATTTCCTGATCGCCGCTTCGATTCGTGCTCTTCTGCCAAACAGTTGGTACGGCAAGATAGTCATCTTCATCATCATCTCGAGAAACAGAGCAGCGGCAGCAATGAAAACGACGTCGTCAGCAGCATCATTGATCACCACCAAAAGTCTAACAACAACAACAACCACAACAGCACCAAATTCACAGCTGTATCCGATCAGTATTTCACGGGCGGCCGAAACACCACCACCACAAGTAGTACCAGCAGCGGCGCCAGCACGCAATCCACCAAGAAGCAACAGCTGGCTTCCGTTTGCGACTGGTTCGTCACCGAGAAAAAGCACAACAACAAGCGGAGAACCAAACCCAGCAACGTGAGGAGGAGCACGAGATCGTCGCTGCCGTCGTTCTCCTGCCACGTACCCGACGAGGATCGCGAGCTTCTGCTCCGGCCAGAAGCCGTCGATGTGTCGTCAGCGGTGCCGGATACGACGTCGTTCAAGGTCGACCGGAGCGTTGACCGGAACTTTGACCGGCAGGTGTCGCTGCCGAGGCTCTCAAGCGGGAGTAGCTACGCCGGGAGCTTGTTCTCCGGGACGACGACGCTGGACGGGAACTTCTCCGGCAACGTCAAGGACTCGTCGGCGACGACGAGGCCGGTGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGTGGAGGTGGTGGTGGGAGTGGGAGTGGAGGCGAGTAGGGATAGCTTGGCGCAGAGGTCCAAGGAGAGCTACTATTTGCAGCTTCTATTGGCCAAGAGGATTAGCGCTCAAGCTACTCTCGGTAGTGAGACGTTGCTTTTGCGCCACACTGGCTTTGAGGTTACCGATGTTGAGACGGTGTCGTATCGCCTCTGGGTTAGTGGCTGCTTGTCTTACAATGAGAAAATATCGGATGGTTTCTACAATATTTTGGGGATGAATCCATATCTATGGGTGATGTGCAATGATGTGGAAGAAGGTAAACGTCTACCATCGCTGATGTCACTTAGAGCAATTAAACCCGTAGAGACATCAATGGAGGTGGTTCTTGTTGACAAACATGGGGACTCTCGCCTCAAGGAACTTCAAGATAAGGCACAAGAACTTTATTGTGCTTCAGAGAATGCCTTGGTGTTGGTGGAGAAACTTGGCAAGCTTGTCGCCATCTACATGGGGGGTACTTATCCTGTGGAGCAAGGAGATCTCCACATGCGCTGGAAAGTGGTTAGCAAGAGATTGAGGGAATTCCAAAAGTGTATTGTGCTCCCCATTGGCAGCCTATCAATGGGGCTCTGCAGGCATCGTGCTATTCTCTTCAAGAAATTGGCAGACTACATAGGTTTACCTTGCCGGATAGCTCGTGGTTGCAAGTATTGTGTGGCAGATCATAGGTCTTCTTGTCTTGTTAAAATTGAAGACAGGCAGCTTGTGAGGGAATATGTGGTTGATCTAGTTGGGGAACCCGGAAATGTCCATGGCCCAGATTCCTCGATCAATGGATCTCTGTCTTCAATATCTTCACCATTTCAAATTTCTCAGCAAAAAGAGTTCCAACGAATTTATAGGGATAGTGGATTATGTTCCCAAATTATAAACTCAAAGCACACTCGTCCACCTCCTGAAGATCCTCTGTATCCAGGCTACAGAGAGGAAAGCCAGGTCCTGAAAGATAGTAGTTTGCTTCCAGTTGATCAAACTAGATTTGGGATGGAAGCTTCTGTAATGCCTTTGGACTTGAAAGCGAATGCGGAGCATTGCCTTCTCCAGACACCAATGCCACCTTGTGTACAAGGTGATATTTCCGAAGCTGTTGATGTGGGAGCTGCCATTGCATCATTAGAGGAATGTGCTAGACTAGGTGAAGAAAGTATTATTTTACAGCAAGCTTACCGGAAGGAGATTGTTGTGTCAAGAAGTGGAGTAATATGTAGCAGTGACAAGTCCAGTCAATCAGATCTAGAGGAGGTTGACAGTAAGCTTGAGATTCAAAGCCGATTTTCTGCTGTCACTGTTCCTAGGTACTTGAATCTCGAACCATCTCTTGCTATGGACTGGCTTGAGATTGCATGGGATGAGTTACATATCAAAGAGCGTGTTGGTGCTGGCTCATTTGGAACTGTGCATCGTGCTGAATGGCATGGATCGGATGTAGCTGTCAAGGTTTTAACTGTTCAAGATTTCCATGATGATCAGTTGAGGGAATTTTTGCGTGAGGTTGCAATTATGAAACGTGTCCGCCATCCCAATGTAGTTCTGTTCATGGGAGCAGTTACAAAGCGTCCACATCTCTCAATAGTGACAGAGTATTTACCTAGGGGTAGTCTATATCGACTCATACACAGGCCAGCTTCTGGGGAACTTCTGGATCATAGGCGGCGGCTGCGCATGGCATTAGATGTGGCCAAGGGGATCAATTACCTCCATTGTCTTAGCCCTCCTATTGTCCATTGGGATCTTAAATCTCCAAATTTGTTGGTTGATAAAAATTGGACAGCGAAGGTATGCGATTTTGGGTTGTCCAGGTTCAAAGCAAACACTTTCATATCATCGAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCAGAGTTCCTTCGCGGAGAGCCCTCAAATGAGAAGTCTGATGTCTACAGTTTCGGAGTAATCCTTTGGGAACTTGTGACCATGCAACAACCTTGGAGTGGGCTTAGTCCTGCGCAGGTCGTTGGCGCTGTTGCTTTCCAGAATAGAAGGCTTGCTATCCCAGCAAATACTCCCCCAATGTTGGCTTCTCTTATGGAATCCTGCTGGGCTGATGACCCTGCTCAGCGCCCAACATTTAAAAGTATAGTGGAGTCGCTGAAGAAGTTGCTAAAATCTCCTCTGCAGTGGGCACAGGTGAGTGGAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

971

Amino Acids

108.77

Weight (kDa)

6.75

Isoelectric Point (pI)

52.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 292 - 499 4.2e-75 EDR1/CTR1/ARMC3, peptidase-like
PK_Tyr_Ser-Thr PF07714 701 - 955 1.5e-65 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 702 - 953 5.7e-52 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1616
AarI CACCTGC 1 cut(s) 541
AasI GACNNNNNNGTC 1 cut(s) 338
AatII GACGTC 2 cut(s) 150, 509
Acc16I TGCGCA 2 cut(s) 2408, 2721
Acc36I ACCTGC 2 cut(s) 541, 2713
AccB1I GGYRCC 2 cut(s) 284, 493
AccB7I CCANNNNNTGG 1 cut(s) 2375
AccI GTMKAC 3 cut(s) 519, 1012, 2652
AccII CGCG 2 cut(s) 450, 2622
AclWI GGATC 7 cut(s) 453, 1531, 1643, 2173, 2397, 2441, 2484
AcoI YGGCCR 4 cut(s) 247, 464, 795, 2424
AcsI RAATTY 6 cut(s) 212, 1268, 1554, 1581, 2225, 2491
AcuI CTGAAG 3 cut(s) 1125, 1665, 2885
AcyI GRCGYC 3 cut(s) 147, 285, 506
AdeI CACNNNGTG 1 cut(s) 1808
AfaI GTAC 6 cut(s) 84, 274, 435, 1204, 1812, 2045
AfeI AGCGCT 1 cut(s) 811
AfiI CCNNNNNNNGG 4 cut(s) 1309, 2375, 2705, 2788
AflIII ACRYGT 1 cut(s) 2254
AjnI CCWGG 3 cut(s) 1660, 1680, 2543
AjuI GAANNNNNNNTTGG 2 cut(s) 2776, 2808
AleI CACNNNNGTG 1 cut(s) 2596
Alw21I GWGCWC 3 cut(s) 65, 401, 1290
Alw26I GTCTC 3 cut(s) 827, 872, 1046
AlwI GGATC 7 cut(s) 453, 1531, 1643, 2173, 2397, 2441, 2484
AlwNI CAGNNNCTG 2 cut(s) 1687, 2375
Ama87I CYCGRG 2 cut(s) 28, 113
Aor51HI AGCGCT 1 cut(s) 811
AoxI GGCC 7 cut(s) 247, 464, 668, 795, 1501, 2366, 2424
ApoI RAATTY 6 cut(s) 212, 1268, 1554, 1581, 2225, 2491
ArsI GACNNNNNNTTYG 6 cut(s) 524, 556, 826, 858, 2627, 2659
AspA2I CCTAGG 2 cut(s) 2039, 2336
AspLEI GCGC 9 cut(s) 287, 757, 812, 849, 1239, 2409, 2722, 2735, 2835
AspS9I GGNCC 3 cut(s) 762, 1502, 1684
AsuC2I CCSGG 3 cut(s) 592, 607, 1488
AsuHPI GGTGA 7 cut(s) 161, 334, 991, 1536, 1829, 1895, 2914
AvaI CYCGRG 2 cut(s) 28, 113
AvaII GGWCC 2 cut(s) 762, 1684
AvrII CCTAGG 2 cut(s) 2039, 2336
BaeGI GKGCMC 1 cut(s) 2899
BaeI ACNNNNGTAYC 2 cut(s) 207, 240
BalI TGGCCA 2 cut(s) 797, 2426
BanI GGYRCC 2 cut(s) 284, 493
BanII GRGCYC 2 cut(s) 1317, 2631
BauI CACGAG 2 cut(s) 400, 1383
BbsI GAAGAC 3 cut(s) 1410, 1446, 1524
Bbv12I GWGCWC 3 cut(s) 65, 401, 1290
BccI CCATC 7 cut(s) 932, 1024, 1196, 1726, 2068, 2271, 2596
BceAI ACGGC 3 cut(s) 101, 400, 458
BcgI CGANNNNNNTGC 2 cut(s) 1165, 1199
BciT130I CCWGG 3 cut(s) 1662, 1682, 2545
BciVI GTATCC 3 cut(s) 235, 493, 1668
BclI TGATCA 3 cut(s) 166, 1714, 2212
BcnI CCSGG 3 cut(s) 592, 607, 1488
BcoDI GTCTC 3 cut(s) 827, 872, 1046
BfaI CTAG 7 cut(s) 1475, 1722, 1875, 1880, 1982, 2040, 2337
BfmI CTRYAG 4 cut(s) 1318, 1666, 2653, 2888
BfoI RGCGCY 4 cut(s) 288, 813, 2736, 2836
BfuAI ACCTGC 2 cut(s) 541, 2713
BfuI GTATCC 3 cut(s) 235, 493, 1668
BglI GCCNNNNNGGC 1 cut(s) 855
BglII AGATCT 2 cut(s) 1225, 1978
BlnI CCTAGG 2 cut(s) 2039, 2336
BlpI GCTNAGC 1 cut(s) 2829
Bme1390I CCNGG 6 cut(s) 592, 607, 1488, 1662, 1682, 2545
Bme18I GGWCC 2 cut(s) 762, 1684
BmeT110I CYCGRG 2 cut(s) 28, 113
BmgT120I GGNCC 3 cut(s) 762, 1502, 1684
BmiI GGNNCC 4 cut(s) 286, 495, 1485, 2607
BmrFI CCNGG 6 cut(s) 592, 607, 1488, 1662, 1682, 2545
BmsI GCATC 4 cut(s) 168, 1333, 1865, 2155
BpiI GAAGAC 3 cut(s) 1410, 1446, 1524
BpmI CTGGAG 2 cut(s) 1772, 2592
Bpu1102I GCTNAGC 1 cut(s) 2829
BpuEI CTTGAG 5 cut(s) 556, 798, 1085, 2024, 2102
BpuMI CCSGG 3 cut(s) 592, 607, 1488
BsaAI YACGTR 1 cut(s) 433
BsaBI GATNNNNATC 1 cut(s) 96
BsaHI GRCGYC 3 cut(s) 147, 285, 506
BsaJI CCNNGG 9 cut(s) 29, 563, 765, 1152, 1498, 2039, 2336, 2427, 2699
BsaWI WCCGGW 3 cut(s) 522, 534, 1914
BsaXI ACNNNNNCTCC 2 cut(s) 714, 744
Bsc4I CCNNNNNNNGG 4 cut(s) 1309, 2375, 2705, 2788
Bse118I RCCGGY 2 cut(s) 546, 670
Bse1I ACTGG 5 cut(s) 338, 859, 1709, 1968, 2081
Bse3DI GCAATG 4 cut(s) 142, 994, 1777, 1851
Bse8I GATNNNNATC 1 cut(s) 96
BseBI CCWGG 3 cut(s) 1662, 1682, 2545
BseDI CCNNGG 9 cut(s) 29, 563, 765, 1152, 1498, 2039, 2336, 2427, 2699
BseGI GGATG 7 cut(s) 943, 966, 1737, 2101, 2176, 2263, 2607
BseJI GATNNNNATC 1 cut(s) 96
BseLI CCNNNNNNNGG 4 cut(s) 1309, 2375, 2705, 2788
BseMI GCAATG 4 cut(s) 142, 994, 1777, 1851
BseMII CTCAG 3 cut(s) 1574, 2586, 2843
BseNI ACTGG 5 cut(s) 338, 859, 1709, 1968, 2081
BseSI GKGCMC 1 cut(s) 2899
BseX3I CGGCCG 1 cut(s) 247
BseYI CCCAGC 3 cut(s) 380, 2767, 2811
Bsh1236I CGCG 2 cut(s) 450, 2622
Bsh1285I CGRYCG 2 cut(s) 250, 523
BshFI GGCC 7 cut(s) 249, 466, 670, 797, 1503, 2368, 2426
BshNI GGYRCC 2 cut(s) 284, 493
BsiEI CGRYCG 2 cut(s) 250, 523
BsiHKAI GWGCWC 3 cut(s) 65, 401, 1290
BsiHKCI CYCGRG 2 cut(s) 28, 113
BslFI GGGAC 2 cut(s) 622, 1103
BslI CCNNNNNNNGG 4 cut(s) 1309, 2375, 2705, 2788
BsmAI GTCTC 3 cut(s) 827, 872, 1046
BsmBI CGTCTC 2 cut(s) 827, 872
BsmFI GGGAC 2 cut(s) 622, 1103
BsmI GAATGC 2 cut(s) 1153, 1774
BsnI GGCC 7 cut(s) 249, 466, 670, 797, 1503, 2368, 2426
BsoBI CYCGRG 2 cut(s) 28, 113
Bsp1286I GDGCHC 6 cut(s) 65, 401, 1290, 1317, 2631, 2899
Bsp1407I TGTACA 1 cut(s) 1810
Bsp1720I GCTNAGC 1 cut(s) 2829
Bsp19I CCATGG 1 cut(s) 1498
Bsp68I TCGCGA 1 cut(s) 450
BspANI GGCC 7 cut(s) 249, 466, 670, 797, 1503, 2368, 2426
BspCNI CTCAG 3 cut(s) 1573, 2587, 2842
BspFNI CGCG 2 cut(s) 450, 2622
BspLI GGNNCC 4 cut(s) 286, 495, 1485, 2607
BspMAI CTGCAG 2 cut(s) 1322, 2892
BspMI ACCTGC 2 cut(s) 541, 2713
BspPI GGATC 7 cut(s) 453, 1531, 1643, 2173, 2397, 2441, 2484
BspQI GCTCTTC 1 cut(s) 70
BspT107I GGYRCC 2 cut(s) 284, 493
BsrDI GCAATG 4 cut(s) 142, 994, 1777, 1851
BsrFI RCCGGY 2 cut(s) 546, 670
BsrGI TGTACA 1 cut(s) 1810
BsrI ACTGG 5 cut(s) 338, 859, 1709, 1968, 2081
BssAI RCCGGY 2 cut(s) 546, 670
BssECI CCNNGG 9 cut(s) 29, 563, 765, 1152, 1498, 2039, 2336, 2427, 2699
BssNI GRCGYC 3 cut(s) 147, 285, 506
BssSI CACGAG 2 cut(s) 400, 1383
BssT1I CCWWGG 7 cut(s) 765, 1152, 1498, 2039, 2336, 2427, 2699
Bst2BI CACGAG 2 cut(s) 400, 1383
Bst2UI CCWGG 3 cut(s) 1662, 1682, 2545
Bst4CI ACNGT 7 cut(s) 78, 883, 1997, 2035, 2143, 2194, 2657
Bst6I CTCTTC 3 cut(s) 70, 675, 1343
BstACI GRCGYC 3 cut(s) 147, 285, 506
BstAUI TGTACA 1 cut(s) 1810
BstBAI YACGTR 1 cut(s) 433
BstDEI CTNAG 6 cut(s) 1031, 1560, 2453, 2595, 2711, 2829
BstDSI CCRYGG 1 cut(s) 1498
BstEII GGTNACC 1 cut(s) 865
BstF5I GGATG 7 cut(s) 943, 966, 1737, 2101, 2176, 2263, 2607
BstFNI CGCG 2 cut(s) 450, 2622
BstH2I RGCGCY 4 cut(s) 288, 813, 2736, 2836
BstHHI GCGC 9 cut(s) 287, 757, 812, 849, 1239, 2409, 2722, 2735, 2835
BstMAI GTCTC 3 cut(s) 827, 872, 1046
BstMCI CGRYCG 2 cut(s) 250, 523
BstNI CCWGG 3 cut(s) 1662, 1682, 2545
BstNSI RCATGY 1 cut(s) 1237
BstPI GGTNACC 1 cut(s) 865
BstSCI CCNGG 6 cut(s) 590, 605, 1486, 1660, 1680, 2543
BstSFI CTRYAG 4 cut(s) 1318, 1666, 2653, 2888
BstSLI GKGCMC 1 cut(s) 2899
BstUI CGCG 2 cut(s) 450, 2622
BstV2I GAAGAC 3 cut(s) 1410, 1446, 1524
BstX2I RGATCY 5 cut(s) 1225, 1523, 1648, 1978, 2476
BstXI CCANNNNNNTGG 3 cut(s) 79, 975, 1195
BstYI RGATCY 5 cut(s) 1225, 1523, 1648, 1978, 2476
BstZI CGGCCG 1 cut(s) 247
BsuI GTATCC 3 cut(s) 235, 493, 1668
BsuRI GGCC 7 cut(s) 249, 466, 670, 797, 1503, 2368, 2426
BtgI CCRYGG 1 cut(s) 1498
BtgZI GCGATG 1 cut(s) 1002
BtsCI GGATG 7 cut(s) 943, 966, 1737, 2101, 2176, 2263, 2607
BtsI GCAGTG 2 cut(s) 1963, 2897
BtsIMutI CAGTG 4 cut(s) 852, 1963, 2031, 2897
BtuMI TCGCGA 1 cut(s) 450
BveI ACCTGC 2 cut(s) 541, 2713
CaiI CAGNNNCTG 2 cut(s) 1687, 2375
CfoI GCGC 9 cut(s) 287, 757, 812, 849, 1239, 2409, 2722, 2735, 2835
Cfr10I RCCGGY 2 cut(s) 546, 670
Cfr13I GGNCC 3 cut(s) 762, 1502, 1684
CseI GACGC 2 cut(s) 625, 2291
Csp6I GTAC 6 cut(s) 83, 273, 434, 1203, 1811, 2044
CspCI CAANNNNNGTGG 2 cut(s) 1047, 1082
CviQI GTAC 6 cut(s) 83, 273, 434, 1203, 1811, 2044
DdeI CTNAG 6 cut(s) 1031, 1560, 2453, 2595, 2711, 2829
DinI GGCGCC 1 cut(s) 286
DraI TTTAAA 1 cut(s) 2845
DraIII CACNNNGTG 1 cut(s) 1808
DrdI GACNNNNNNGTC 1 cut(s) 338
DseDI GACNNNNNNGTC 1 cut(s) 338
EaeI YGGCCR 4 cut(s) 247, 464, 795, 2424
EagI CGGCCG 1 cut(s) 247
Eam1104I CTCTTC 3 cut(s) 70, 675, 1343
EarI CTCTTC 3 cut(s) 70, 675, 1343
EciI GGCGGA 1 cut(s) 2249
EclXI CGGCCG 1 cut(s) 247
Eco130I CCWWGG 7 cut(s) 765, 1152, 1498, 2039, 2336, 2427, 2699
Eco24I GRGCYC 2 cut(s) 1317, 2631
Eco47I GGWCC 2 cut(s) 762, 1684
Eco47III AGCGCT 1 cut(s) 811
Eco52I CGGCCG 1 cut(s) 247
Eco57I CTGAAG 3 cut(s) 1125, 1665, 2885
Eco88I CYCGRG 2 cut(s) 28, 113
Eco91I GGTNACC 1 cut(s) 865
EcoO109I RGGNCCY 1 cut(s) 1684
EcoO65I GGTNACC 1 cut(s) 865
EcoRI GAATTC 1 cut(s) 1268
EcoRII CCWGG 3 cut(s) 1660, 1680, 2543
EcoT14I CCWWGG 7 cut(s) 765, 1152, 1498, 2039, 2336, 2427, 2699
EcoT38I GRGCYC 2 cut(s) 1317, 2631
EgeI GGCGCC 1 cut(s) 286
EheI GGCGCC 1 cut(s) 286
ErhI CCWWGG 7 cut(s) 765, 1152, 1498, 2039, 2336, 2427, 2699
Esp3I CGTCTC 2 cut(s) 827, 872
FaqI GGGAC 2 cut(s) 622, 1103
FauI CCCGC 1 cut(s) 569
FbaI TGATCA 3 cut(s) 166, 1714, 2212
FblI GTMKAC 3 cut(s) 519, 1012, 2652
FokI GGATG 7 cut(s) 950, 973, 1744, 2108, 2183, 2250, 2614
FriOI GRGCYC 2 cut(s) 1317, 2631
FspBI CTAG 7 cut(s) 1475, 1722, 1875, 1880, 1982, 2040, 2337
FspI TGCGCA 2 cut(s) 2408, 2721
GlaI GCGC 9 cut(s) 286, 756, 811, 848, 1238, 2408, 2721, 2734, 2834
GsaI CCCAGC 3 cut(s) 384, 2771, 2815
GsuI CTGGAG 2 cut(s) 1772, 2592
HaeII RGCGCY 4 cut(s) 288, 813, 2736, 2836
HaeIII GGCC 7 cut(s) 249, 466, 670, 797, 1503, 2368, 2426
HgaI GACGC 2 cut(s) 625, 2291
HhaI GCGC 9 cut(s) 287, 757, 812, 849, 1239, 2409, 2722, 2735, 2835
Hin1I GRCGYC 3 cut(s) 147, 285, 506
Hin6I GCGC 9 cut(s) 285, 755, 810, 847, 1237, 2407, 2720, 2733, 2833
HinP1I GCGC 9 cut(s) 285, 755, 810, 847, 1237, 2407, 2720, 2733, 2833
HincII GTYRAC 4 cut(s) 520, 532, 1078, 1993
HindII GTYRAC 4 cut(s) 520, 532, 1078, 1993
HindIII AAGCTT 4 cut(s) 1178, 1737, 1908, 2000
HphI GGTGA 7 cut(s) 161, 334, 991, 1536, 1829, 1895, 2914
Hpy188I TCNGA 8 cut(s) 229, 937, 1144, 1828, 1978, 2170, 2647, 2663
HpyAV CCTTC 6 cut(s) 995, 1793, 1912, 2515, 2627, 2748
HpyCH4III ACNGT 7 cut(s) 78, 883, 1997, 2035, 2143, 2194, 2657
HpyCH4IV ACGT 8 cut(s) 147, 387, 432, 506, 642, 836, 1009, 2254
HpyF3I CTNAG 6 cut(s) 1031, 1560, 2453, 2595, 2711, 2829
HpySE526I ACGT 8 cut(s) 147, 387, 432, 506, 642, 836, 1009, 2254
Hsp92I GRCGYC 3 cut(s) 147, 285, 506
HspAI GCGC 9 cut(s) 285, 755, 810, 847, 1237, 2407, 2720, 2733, 2833
KasI GGCGCC 1 cut(s) 284
Ksp22I TGATCA 3 cut(s) 166, 1714, 2212
LguI GCTCTTC 1 cut(s) 70
LweI GCATC 4 cut(s) 168, 1333, 1865, 2155
MaeI CTAG 7 cut(s) 1475, 1722, 1875, 1880, 1982, 2040, 2337
MaeII ACGT 8 cut(s) 147, 387, 432, 506, 642, 836, 1009, 2254
MaeIII GTNAC 9 cut(s) 340, 865, 1026, 1958, 2029, 2100, 2293, 2320, 2683
MflI RGATCY 5 cut(s) 1225, 1523, 1648, 1978, 2476
MhlI GDGCHC 6 cut(s) 65, 401, 1290, 1317, 2631, 2899
MlsI TGGCCA 2 cut(s) 797, 2426
MluNI TGGCCA 2 cut(s) 797, 2426
Mly113I GGCGCC 1 cut(s) 285
MlyI GAGTC 4 cut(s) 644, 1085, 2349, 2867
MmeI TCCRAC 1 cut(s) 1600
Mox20I TGGCCA 2 cut(s) 797, 2426
MscI TGGCCA 2 cut(s) 797, 2426
MseI TTAA 5 cut(s) 1041, 1431, 2189, 2481, 2844
MslI CAYNNNNRTG 4 cut(s) 973, 1193, 2268, 2596
Msp20I TGGCCA 2 cut(s) 797, 2426
MspA1I CMGCKG 5 cut(s) 129, 221, 282, 316, 491
MspR9I CCNGG 6 cut(s) 592, 607, 1488, 1662, 1682, 2545
Mva1269I GAATGC 2 cut(s) 1153, 1774
MvaI CCWGG 3 cut(s) 1662, 1682, 2545
MvnI CGCG 2 cut(s) 450, 2622
NarI GGCGCC 1 cut(s) 285
NciI CCSGG 3 cut(s) 592, 607, 1488
NcoI CCATGG 1 cut(s) 1498
NlaIV GGNNCC 4 cut(s) 286, 495, 1485, 2607
NmeAIII GCCGAG 1 cut(s) 588
NmuCI GTSAC 6 cut(s) 340, 1026, 1958, 2029, 2320, 2683
NruI TCGCGA 1 cut(s) 450
NsbI TGCGCA 2 cut(s) 2408, 2721
NspI RCATGY 1 cut(s) 1237
OliI CACNNNNGTG 1 cut(s) 2596
PaeR7I CTCGAG 1 cut(s) 113
PaqCI CACCTGC 1 cut(s) 541
PciSI GCTCTTC 1 cut(s) 70
PcsI WCGNNNNNNNCGW 7 cut(s) 413, 416, 438, 447, 525, 659, 662
PctI GAATGC 2 cut(s) 1153, 1774
PfeI GAWTC 6 cut(s) 56, 964, 1508, 2008, 2050, 2804
PflFI GACNNNGTC 2 cut(s) 149, 883
PflMI CCANNNNNTGG 1 cut(s) 2375
PfoI TCCNGGA 1 cut(s) 605
PleI GAGTC 4 cut(s) 644, 1085, 2349, 2866
PluTI GGCGCC 1 cut(s) 288
PpsI GAGTC 4 cut(s) 644, 1085, 2349, 2866
Ppu21I YACGTR 1 cut(s) 433
PpuMI RGGWCCY 1 cut(s) 1684
PsiI TTATAA 1 cut(s) 1616
Psp5II RGGWCCY 1 cut(s) 1684
Psp6I CCWGG 3 cut(s) 1660, 1680, 2543
PspEI GGTNACC 1 cut(s) 865
PspFI CCCAGC 3 cut(s) 380, 2767, 2811
PspGI CCWGG 3 cut(s) 1660, 1680, 2543
PspN4I GGNNCC 4 cut(s) 286, 495, 1485, 2607
PspPI GGNCC 3 cut(s) 762, 1502, 1684
PspPPI RGGWCCY 1 cut(s) 1684
PstI CTGCAG 2 cut(s) 1322, 2892
PstNI CAGNNNCTG 2 cut(s) 1687, 2375
PsuI RGATCY 5 cut(s) 1225, 1523, 1648, 1978, 2476
PsyI GACNNNGTC 2 cut(s) 149, 883
PvuII CAGCTG 2 cut(s) 221, 316
RruI TCGCGA 1 cut(s) 450
RsaI GTAC 6 cut(s) 84, 274, 435, 1204, 1812, 2045
RsaNI GTAC 6 cut(s) 83, 273, 434, 1203, 1811, 2044
RseI CAYNNNNRTG 4 cut(s) 973, 1193, 2268, 2596
SalI GTCGAC 1 cut(s) 518
SapI GCTCTTC 1 cut(s) 70
SaqAI TTAA 5 cut(s) 1041, 1431, 2189, 2481, 2844
Sau96I GGNCC 3 cut(s) 762, 1502, 1684
SchI GAGTC 4 cut(s) 644, 1085, 2349, 2867
ScrFI CCNGG 6 cut(s) 592, 607, 1488, 1662, 1682, 2545
SduI GDGCHC 6 cut(s) 65, 401, 1290, 1317, 2631, 2899
SfaNI GCATC 4 cut(s) 168, 1333, 1865, 2155
SfcI CTRYAG 4 cut(s) 1318, 1666, 2653, 2888
SfoI GGCGCC 1 cut(s) 286
Sfr274I CTCGAG 1 cut(s) 113
SinI GGWCC 2 cut(s) 762, 1684
SlaI CTCGAG 1 cut(s) 113
SmiMI CAYNNNNRTG 4 cut(s) 973, 1193, 2268, 2596
SmlI CTYRAG 6 cut(s) 113, 571, 813, 1100, 2003, 2081
SmoI CTYRAG 6 cut(s) 113, 571, 813, 1100, 2003, 2081
SspDI GGCGCC 1 cut(s) 284
SspI AATATT 1 cut(s) 952
SspMI CTAG 7 cut(s) 1475, 1722, 1875, 1880, 1982, 2040, 2337
StyD4I CCNGG 6 cut(s) 590, 605, 1486, 1660, 1680, 2543
StyI CCWWGG 7 cut(s) 765, 1152, 1498, 2039, 2336, 2427, 2699
TaaI ACNGT 7 cut(s) 78, 883, 1997, 2035, 2143, 2194, 2657
TaiI ACGT 8 cut(s) 150, 390, 435, 509, 645, 839, 1012, 2257
TaqI TCGA 8 cut(s) 54, 114, 477, 519, 1514, 2055, 2353, 2573
TatI WGTACW 1 cut(s) 1810
TauI GCSGC 6 cut(s) 51, 132, 249, 285, 2401, 2404
TfiI GAWTC 6 cut(s) 56, 964, 1508, 2008, 2050, 2804
Tru1I TTAA 5 cut(s) 1041, 1431, 2189, 2481, 2844
Tru9I TTAA 5 cut(s) 1041, 1431, 2189, 2481, 2844
TscAI CASTG 4 cut(s) 859, 1963, 2038, 2897
TseFI GTSAC 6 cut(s) 340, 1026, 1958, 2029, 2320, 2683
Tsp45I GTSAC 6 cut(s) 340, 1026, 1958, 2029, 2320, 2683
TspDTI ATGAA 6 cut(s) 92, 153, 977, 2264, 2272, 2554
TspGWI ACGGA 1 cut(s) 313
TspRI CASTG 4 cut(s) 859, 1963, 2038, 2897
Tth111I GACNNNGTC 2 cut(s) 149, 883
Van91I CCANNNNNTGG 1 cut(s) 2375
VpaK11BI GGWCC 2 cut(s) 762, 1684
XapI RAATTY 6 cut(s) 212, 1268, 1554, 1581, 2225, 2491
XbaI TCTAGA 1 cut(s) 1981
XceI RCATGY 1 cut(s) 1237
XhoI CTCGAG 1 cut(s) 113
XmaJI CCTAGG 2 cut(s) 2039, 2336
XmiI GTMKAC 3 cut(s) 519, 1012, 2652
XspI CTAG 7 cut(s) 1475, 1722, 1875, 1880, 1982, 2040, 2337
ZraI GACGTC 2 cut(s) 148, 507
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.