Rw7G036890

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0008785
Physical Location & Seq
Forward (+)
55928000 .. 55934897
6898 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G036890.1

Sequence Viewer

Length: 2904 bp
ATGCCTCACAGAACGACTTACTTCTTCCCGAGGCAATTTCCGGATCGCCGCTTCGATTCGTGCTCTTCTGCCAAACAGTTGGTACCGCAAGATAGTCATCTTCATCATCATCTCGAGAAACAGAGCAGCGGCAGCAATGAAAACGTCGTCGTCAGCAGCATCATTGATCACCACCAAAAGTCTAACAACAACAACAACCACAACAGCACCAAATTCACAGCTGTATCCGATCAGTATTTCACGGGCGGCCGAAACACCACCACAAGTAGTACCAGCAGCGGCGCCAGCACGCAATCCACCAAGAAGCAACAGCTGGCTTCCATTTGCGACTGGTTCGTCACCGACAAAAAGCACAACAACAAGCGGAGAACCAAACCCAGCCACGTGAGGAGGAGCACGAGATCATCGCTGCCGTCGTTCTCCTGCCACGTACCCGACGAGGATCGCGAGCTTCTGCTCCGGCCAGAAGCCGTCGATGTGTCGTCAGCGGTGCCGGATACGACGTCGTTCAAGGTCGACCGGAGCGTTGACCGGAACTTTGACCGGCAGGTGTCGCTGCCGAGGCTCTCAAGCGGGAGTAGCTACGCCGGGAGCTTGTTCTCCGGGACGACGACGCTGGACGGGAACTTCTCCAGCGACGTCAAGGACTCGTCGGCGACGACGAGGCCGGTGGAGGAAGAGGAGGAGGAGGAGGAGGTGGTGGGAGTGGGAGTGGGAGTGGAGGCGAGTAGGGATAGCTTGGCGCAGAGGTCCAAGGAGAGCTACTGTTTGCAGCTCCTATTGGCCAAGAGGATTAGCGCTCAAGCTACTCTCGGTAGTCAGACGTTGCTTTTGCGCCACACTGGCTTTGAGGTTACCGATGTTGAGATGGTGTCGTATCGCCTCTGGGTTAGTGGCTGCTTGTCTTACAATGAGAAAATATCGGATGGTTTCTACAATATTTTGGGGATGAATCCGTATCTATGGGTGATGTGCAATGATGTGGAAGAAGGTAAACGTCTACCATCGCTGATGTCACTTAGAGCGATTAAACCCGCAGAGACATCAATGGAGGTGGTTCTTGTTGACAAACATGGGGACTCTCGCCTCAAGGAACTTCAAGATAAGGCACAAGAACTTTATTGTGCTTCAGAGAATGCCTTGGTGTTGGTGGAGAAACTTGGCAAGCTTGTCGCCATCTACATGGGGGGTACTTATCCTGTGGAGCAAGGAGATCTCCACATGCGCTGGAAAGTGGTTAGCAAGAGATTGAGGGAATTCCAAAAGTGTATTGTGCTCCCCATTGGCAGCCTATCAATGGGGCTCTGCAGGCATCGTGCAATTCTCTTCAAGAAATTGGCAGACTACATAGGTTTACCTTGCCGGATAGCTCGTGGTTGCAAGTATTGTGTGGCAGATCATAGGTCTTCTTGTCTTGTTAAAATTGAAGACAGGCAGCTTGTGAGGGAATATGTGGTTGATCTAGTTGGGGAACCCGGAAATGTCCATGGCCCAGATTCCTCGATCAATGGATCTCTGTCTTCAATATCTTCACCATTTCAAATTTCTCAGCAAAAAGAGTTCCAACGAATTTATAGGGATAGTGGATTATGTTCCCAAATTATAAACTCAAAGCACACTCGTCCACCTCCTGAAGATCCTCTGTATCCAGGCTACAGAGAGGAAAGCCAGGTCCTGAAAGATAATAGTTTGCTTCCAGTTGATCAAACTAGATTTGGGATGGAAGCTTCTGTAATGCCTTTGGACTTGAAAGCGAATGTGGAGCATTGCCTTCTCCAGACACCAATGCCACCTTGTTTACAAGGTGATATTTCCGAAGCTGTTGATGTGGGAGCTGCCATTGCATCATTAGAGGAATGTGCTAGACTAGGTGAAGAAAGTATTATTGTACAGCAAGCTTACCGGAAGGAGATTGTTGTGTCAAGAAGTGGAGTAATATGTAGCAGTGACAAGTCCAGTCAATCAGATCTAGAGGAGGTTGACAGTAAGCTTGAAATTCAAAACCGATTTTCTGCTGTCACTGTTCCTAGGTACTTGAATCTCGAACCATCTCTTGCTATGGACTGGCTTGAGATCGCATGGGATGAGTTACATATCAAAGAGCGCGTTGGTGCTGGCTCATTTGGAACTGTGCATCGTGCTGAATGGCATGGATCGGATGTAGCTGTCAAGGTTTTAACTGTTCAAGATTTCCATGATGATCAGTTGAGGGAATTTTTGCGCGAGGTTGCAATTATGAAACGTGTCCGCCATCCCAATGTAGTTCTGTTCATGGGTGCAGTTACAAAGCGTCCACATCTCTCAATAGTGACAGAGTATTTACCTAGGGGTAGTCTATATCGACTCATACACAGGCCAGCTTCTGGGGAACTTCTGGATCATAGGCGGCGGCTGCGCATGGCATTAGATGTGGCCAAGGGGATCAATTACCTCCATTGTCTTAGCCCTCCTATTGTCCATTGGGATCTTAAATCTCCAAATTTGTTGGTTGATAAAAATTGGACAGCGAAGGTATGCGATTTTGGGTTGTCCAGGTTCAAAGCAAACACATTCATATCATCGAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCAGAGTTCCTTCGCGGAGAGCCCTCAAATGAGAAGTCTGATGTCTACAGTTTCGGAGTAATCCTTTGGGAACTTGTGACCATGCAACAACCTTGGAGTGGGCTTAGTCCTGCGCAGGTAGTTGGCGCTGTTGCTTTCCAGAACAGAAGGCTTGCTATCCCAGCAAATACTCCCCCAATGTTGGCTTCTCTTATGGAATCCTGCTGGGCGGATGACCCTGCTCAGCGCCCAACATTTAAAAGTATAGTGGAGTCGCTGAAGAAGTTGCTAAAATCTCCTCTGCAGTGGGCACAGGTGAGTGGAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

967

Amino Acids

108.24

Weight (kDa)

7.15

Isoelectric Point (pI)

50.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 288 - 495 3.2e-75 EDR1/CTR1/ARMC3, peptidase-like
PK_Tyr_Ser-Thr PF07714 697 - 951 1.5e-65 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 698 - 949 5.6e-52 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1604
AarI CACCTGC 1 cut(s) 538
AasI GACNNNNNNGTC 1 cut(s) 335
AatII GACGTC 2 cut(s) 506, 642
Acc16I TGCGCA 2 cut(s) 2396, 2709
Acc36I ACCTGC 2 cut(s) 538, 2701
Acc65I GGTACC 1 cut(s) 82
AccB1I GGYRCC 3 cut(s) 82, 281, 490
AccB7I CCANNNNNTGG 1 cut(s) 2363
AccI GTMKAC 3 cut(s) 516, 1000, 2640
AccII CGCG 4 cut(s) 447, 2106, 2223, 2610
AccIII TCCGGA 1 cut(s) 40
AclWI GGATC 8 cut(s) 51, 450, 1519, 1631, 2161, 2385, 2429, 2472
AcoI YGGCCR 4 cut(s) 247, 461, 783, 2412
AcsI RAATTY 7 cut(s) 212, 1256, 1542, 1569, 1995, 2213, 2479
AcuI CTGAAG 3 cut(s) 1113, 1653, 2873
AcvI CACGTG 1 cut(s) 385
AcyI GRCGYC 3 cut(s) 282, 503, 639
AfaI GTAC 6 cut(s) 84, 271, 432, 1192, 1890, 2033
AfeI AGCGCT 1 cut(s) 799
AfiI CCNNNNNNNGG 4 cut(s) 1297, 2363, 2693, 2776
AflIII ACRYGT 1 cut(s) 2242
AjnI CCWGG 3 cut(s) 1648, 1668, 2531
AjuI GAANNNNNNNTTGG 2 cut(s) 2764, 2796
AleI CACNNNNGTG 1 cut(s) 2584
Alw21I GWGCWC 3 cut(s) 65, 398, 1278
Alw26I GTCTC 1 cut(s) 1034
AlwI GGATC 8 cut(s) 51, 450, 1519, 1631, 2161, 2385, 2429, 2472
AlwNI CAGNNNCTG 2 cut(s) 1675, 2363
Ama87I CYCGRG 2 cut(s) 28, 113
Aor13HI TCCGGA 1 cut(s) 40
Aor51HI AGCGCT 1 cut(s) 799
AoxI GGCC 7 cut(s) 247, 461, 665, 783, 1489, 2354, 2412
ApoI RAATTY 7 cut(s) 212, 1256, 1542, 1569, 1995, 2213, 2479
ArsI GACNNNNNNTTYG 6 cut(s) 521, 553, 814, 846, 2615, 2647
Asp718I GGTACC 1 cut(s) 82
AspA2I CCTAGG 2 cut(s) 2027, 2324
AspS9I GGNCC 3 cut(s) 750, 1490, 1672
AsuC2I CCSGG 3 cut(s) 589, 604, 1476
AsuHPI GGTGA 7 cut(s) 161, 331, 979, 1524, 1817, 1883, 2902
AvaI CYCGRG 2 cut(s) 28, 113
AvaII GGWCC 2 cut(s) 750, 1672
AvrII CCTAGG 2 cut(s) 2027, 2324
BaeGI GKGCMC 1 cut(s) 2887
BaeI ACNNNNGTAYC 2 cut(s) 207, 240
BalI TGGCCA 2 cut(s) 785, 2414
BanI GGYRCC 3 cut(s) 82, 281, 490
BanII GRGCYC 2 cut(s) 1305, 2619
BauI CACGAG 2 cut(s) 397, 1371
BbrPI CACGTG 1 cut(s) 385
BbsI GAAGAC 3 cut(s) 1398, 1434, 1512
Bbv12I GWGCWC 3 cut(s) 65, 398, 1278
BccI CCATC 8 cut(s) 862, 920, 1012, 1184, 1714, 2056, 2259, 2584
BceAI ACGGC 2 cut(s) 397, 455
BcgI CGANNNNNNTGC 2 cut(s) 1153, 1187
BciT130I CCWGG 3 cut(s) 1650, 1670, 2533
BciVI GTATCC 3 cut(s) 235, 490, 1656
BclI TGATCA 3 cut(s) 166, 1702, 2200
BcnI CCSGG 3 cut(s) 589, 604, 1476
BcoDI GTCTC 1 cut(s) 1034
BfaI CTAG 7 cut(s) 1463, 1710, 1863, 1868, 1970, 2028, 2325
BfmI CTRYAG 4 cut(s) 1306, 1654, 2641, 2876
BfoI RGCGCY 4 cut(s) 285, 801, 2724, 2824
BfuAI ACCTGC 2 cut(s) 538, 2701
BfuI GTATCC 3 cut(s) 235, 490, 1656
BglI GCCNNNNNGGC 1 cut(s) 843
BglII AGATCT 2 cut(s) 1213, 1966
BlnI CCTAGG 2 cut(s) 2027, 2324
BlpI GCTNAGC 1 cut(s) 2817
Bme1390I CCNGG 6 cut(s) 589, 604, 1476, 1650, 1670, 2533
Bme18I GGWCC 2 cut(s) 750, 1672
BmeT110I CYCGRG 2 cut(s) 28, 113
BmgT120I GGNCC 3 cut(s) 750, 1490, 1672
BmiI GGNNCC 5 cut(s) 84, 283, 492, 1473, 2595
BmrFI CCNGG 6 cut(s) 589, 604, 1476, 1650, 1670, 2533
BmsI GCATC 4 cut(s) 168, 1321, 1853, 2143
BpiI GAAGAC 3 cut(s) 1398, 1434, 1512
BpmI CTGGAG 3 cut(s) 616, 1760, 2580
Bpu1102I GCTNAGC 1 cut(s) 2817
BpuEI CTTGAG 4 cut(s) 553, 786, 1073, 2090
BpuMI CCSGG 3 cut(s) 589, 604, 1476
BsaAI YACGTR 2 cut(s) 385, 430
BsaBI GATNNNNATC 1 cut(s) 96
BsaHI GRCGYC 3 cut(s) 282, 503, 639
BsaJI CCNNGG 9 cut(s) 29, 560, 753, 1140, 1486, 2027, 2324, 2415, 2687
BsaWI WCCGGW 4 cut(s) 40, 519, 531, 1902
BsaXI ACNNNNNCTCC 4 cut(s) 696, 702, 726, 732
Bsc4I CCNNNNNNNGG 4 cut(s) 1297, 2363, 2693, 2776
Bse118I RCCGGY 2 cut(s) 543, 667
Bse1I ACTGG 5 cut(s) 335, 847, 1697, 1956, 2069
Bse3DI GCAATG 4 cut(s) 142, 982, 1765, 1839
Bse8I GATNNNNATC 1 cut(s) 96
BseAI TCCGGA 1 cut(s) 40
BseBI CCWGG 3 cut(s) 1650, 1670, 2533
BseDI CCNNGG 9 cut(s) 29, 560, 753, 1140, 1486, 2027, 2324, 2415, 2687
BseGI GGATG 8 cut(s) 931, 954, 1725, 2089, 2164, 2251, 2595, 2812
BseJI GATNNNNATC 1 cut(s) 96
BseLI CCNNNNNNNGG 4 cut(s) 1297, 2363, 2693, 2776
BseMI GCAATG 4 cut(s) 142, 982, 1765, 1839
BseMII CTCAG 3 cut(s) 1562, 2574, 2831
BseNI ACTGG 5 cut(s) 335, 847, 1697, 1956, 2069
BseRI GAGGAG 9 cut(s) 403, 406, 695, 698, 701, 704, 707, 1988, 2862
BseSI GKGCMC 1 cut(s) 2887
BseX3I CGGCCG 1 cut(s) 247
BseYI CCCAGC 3 cut(s) 377, 2755, 2799
BsgI GTGCAG 1 cut(s) 2298
Bsh1236I CGCG 4 cut(s) 447, 2106, 2223, 2610
Bsh1285I CGRYCG 2 cut(s) 250, 520
BshFI GGCC 7 cut(s) 249, 463, 667, 785, 1491, 2356, 2414
BshNI GGYRCC 3 cut(s) 82, 281, 490
BsiEI CGRYCG 2 cut(s) 250, 520
BsiHKAI GWGCWC 3 cut(s) 65, 398, 1278
BsiHKCI CYCGRG 2 cut(s) 28, 113
BslFI GGGAC 2 cut(s) 619, 1091
BslI CCNNNNNNNGG 4 cut(s) 1297, 2363, 2693, 2776
BsmAI GTCTC 1 cut(s) 1034
BsmFI GGGAC 2 cut(s) 619, 1091
BsmI GAATGC 1 cut(s) 1141
BsnI GGCC 7 cut(s) 249, 463, 667, 785, 1491, 2356, 2414
BsoBI CYCGRG 2 cut(s) 28, 113
Bsp1286I GDGCHC 6 cut(s) 65, 398, 1278, 1305, 2619, 2887
Bsp13I TCCGGA 1 cut(s) 40
Bsp1407I TGTACA 1 cut(s) 1888
Bsp1720I GCTNAGC 1 cut(s) 2817
Bsp19I CCATGG 1 cut(s) 1486
Bsp68I TCGCGA 1 cut(s) 447
BspANI GGCC 7 cut(s) 249, 463, 667, 785, 1491, 2356, 2414
BspCNI CTCAG 3 cut(s) 1561, 2575, 2830
BspEI TCCGGA 1 cut(s) 40
BspFNI CGCG 4 cut(s) 447, 2106, 2223, 2610
BspLI GGNNCC 5 cut(s) 84, 283, 492, 1473, 2595
BspMAI CTGCAG 2 cut(s) 1310, 2880
BspMI ACCTGC 2 cut(s) 538, 2701
BspPI GGATC 8 cut(s) 51, 450, 1519, 1631, 2161, 2385, 2429, 2472
BspQI GCTCTTC 1 cut(s) 70
BspT107I GGYRCC 3 cut(s) 82, 281, 490
BsrDI GCAATG 4 cut(s) 142, 982, 1765, 1839
BsrFI RCCGGY 2 cut(s) 543, 667
BsrGI TGTACA 1 cut(s) 1888
BsrI ACTGG 5 cut(s) 335, 847, 1697, 1956, 2069
BssAI RCCGGY 2 cut(s) 543, 667
BssECI CCNNGG 9 cut(s) 29, 560, 753, 1140, 1486, 2027, 2324, 2415, 2687
BssNI GRCGYC 3 cut(s) 282, 503, 639
BssSI CACGAG 2 cut(s) 397, 1371
BssT1I CCWWGG 7 cut(s) 753, 1140, 1486, 2027, 2324, 2415, 2687
Bst2BI CACGAG 2 cut(s) 397, 1371
Bst2UI CCWGG 3 cut(s) 1650, 1670, 2533
Bst4CI ACNGT 7 cut(s) 78, 767, 1985, 2023, 2131, 2182, 2645
Bst6I CTCTTC 3 cut(s) 70, 672, 1331
BstACI GRCGYC 3 cut(s) 282, 503, 639
BstAUI TGTACA 1 cut(s) 1888
BstBAI YACGTR 2 cut(s) 385, 430
BstDEI CTNAG 6 cut(s) 1019, 1548, 2441, 2583, 2699, 2817
BstDSI CCRYGG 1 cut(s) 1486
BstEII GGTNACC 1 cut(s) 853
BstF5I GGATG 8 cut(s) 931, 954, 1725, 2089, 2164, 2251, 2595, 2812
BstFNI CGCG 4 cut(s) 447, 2106, 2223, 2610
BstH2I RGCGCY 4 cut(s) 285, 801, 2724, 2824
BstMAI GTCTC 1 cut(s) 1034
BstMCI CGRYCG 2 cut(s) 250, 520
BstNI CCWGG 3 cut(s) 1650, 1670, 2533
BstNSI RCATGY 1 cut(s) 1225
BstPI GGTNACC 1 cut(s) 853
BstSCI CCNGG 6 cut(s) 587, 602, 1474, 1648, 1668, 2531
BstSFI CTRYAG 4 cut(s) 1306, 1654, 2641, 2876
BstSLI GKGCMC 1 cut(s) 2887
BstUI CGCG 4 cut(s) 447, 2106, 2223, 2610
BstV2I GAAGAC 3 cut(s) 1398, 1434, 1512
BstX2I RGATCY 5 cut(s) 1213, 1511, 1636, 1966, 2464
BstXI CCANNNNNNTGG 2 cut(s) 79, 1183
BstYI RGATCY 5 cut(s) 1213, 1511, 1636, 1966, 2464
BstZI CGGCCG 1 cut(s) 247
BsuI GTATCC 3 cut(s) 235, 490, 1656
BsuRI GGCC 7 cut(s) 249, 463, 667, 785, 1491, 2356, 2414
BtgI CCRYGG 1 cut(s) 1486
BtgZI GCGATG 2 cut(s) 390, 990
BtsCI GGATG 8 cut(s) 931, 954, 1725, 2089, 2164, 2251, 2595, 2812
BtsI GCAGTG 2 cut(s) 1951, 2885
BtsIMutI CAGTG 4 cut(s) 840, 1951, 2019, 2885
BtuMI TCGCGA 1 cut(s) 447
BveI ACCTGC 2 cut(s) 538, 2701
CaiI CAGNNNCTG 2 cut(s) 1675, 2363
Cfr10I RCCGGY 2 cut(s) 543, 667
Cfr13I GGNCC 3 cut(s) 750, 1490, 1672
CseI GACGC 2 cut(s) 622, 2279
Csp6I GTAC 6 cut(s) 83, 270, 431, 1191, 1889, 2032
CspCI CAANNNNNGTGG 2 cut(s) 1035, 1070
CviQI GTAC 6 cut(s) 83, 270, 431, 1191, 1889, 2032
DdeI CTNAG 6 cut(s) 1019, 1548, 2441, 2583, 2699, 2817
DinI GGCGCC 1 cut(s) 283
DraI TTTAAA 1 cut(s) 2833
DrdI GACNNNNNNGTC 1 cut(s) 335
DseDI GACNNNNNNGTC 1 cut(s) 335
EaeI YGGCCR 4 cut(s) 247, 461, 783, 2412
EagI CGGCCG 1 cut(s) 247
Eam1104I CTCTTC 3 cut(s) 70, 672, 1331
EarI CTCTTC 3 cut(s) 70, 672, 1331
EciI GGCGGA 2 cut(s) 2237, 2819
EclXI CGGCCG 1 cut(s) 247
Eco130I CCWWGG 7 cut(s) 753, 1140, 1486, 2027, 2324, 2415, 2687
Eco24I GRGCYC 2 cut(s) 1305, 2619
Eco47I GGWCC 2 cut(s) 750, 1672
Eco47III AGCGCT 1 cut(s) 799
Eco52I CGGCCG 1 cut(s) 247
Eco57I CTGAAG 3 cut(s) 1113, 1653, 2873
Eco72I CACGTG 1 cut(s) 385
Eco88I CYCGRG 2 cut(s) 28, 113
Eco91I GGTNACC 1 cut(s) 853
EcoO109I RGGNCCY 1 cut(s) 1672
EcoO65I GGTNACC 1 cut(s) 853
EcoRI GAATTC 1 cut(s) 1256
EcoRII CCWGG 3 cut(s) 1648, 1668, 2531
EcoT14I CCWWGG 7 cut(s) 753, 1140, 1486, 2027, 2324, 2415, 2687
EcoT38I GRGCYC 2 cut(s) 1305, 2619
EgeI GGCGCC 1 cut(s) 283
EheI GGCGCC 1 cut(s) 283
ErhI CCWWGG 7 cut(s) 753, 1140, 1486, 2027, 2324, 2415, 2687
FaqI GGGAC 2 cut(s) 619, 1091
FauI CCCGC 2 cut(s) 566, 1042
FbaI TGATCA 3 cut(s) 166, 1702, 2200
FblI GTMKAC 3 cut(s) 516, 1000, 2640
FokI GGATG 8 cut(s) 938, 961, 1732, 2096, 2171, 2238, 2602, 2819
FriOI GRGCYC 2 cut(s) 1305, 2619
FspBI CTAG 7 cut(s) 1463, 1710, 1863, 1868, 1970, 2028, 2325
FspI TGCGCA 2 cut(s) 2396, 2709
GsaI CCCAGC 3 cut(s) 381, 2759, 2803
GsuI CTGGAG 3 cut(s) 616, 1760, 2580
HaeII RGCGCY 4 cut(s) 285, 801, 2724, 2824
HaeIII GGCC 7 cut(s) 249, 463, 667, 785, 1491, 2356, 2414
HgaI GACGC 2 cut(s) 622, 2279
Hin1I GRCGYC 3 cut(s) 282, 503, 639
HincII GTYRAC 4 cut(s) 517, 529, 1066, 1981
HindII GTYRAC 4 cut(s) 517, 529, 1066, 1981
HindIII AAGCTT 4 cut(s) 1166, 1725, 1896, 1988
HinfI GANTC 9 cut(s) 56, 647, 952, 1079, 1496, 2038, 2343, 2792, 2846
HphI GGTGA 7 cut(s) 161, 331, 979, 1524, 1817, 1883, 2902
Hpy188I TCNGA 9 cut(s) 229, 822, 925, 1132, 1816, 1966, 2158, 2635, 2651
HpyAV CCTTC 6 cut(s) 983, 1781, 1900, 2503, 2615, 2736
HpyCH4III ACNGT 7 cut(s) 78, 767, 1985, 2023, 2131, 2182, 2645
HpyCH4IV ACGT 8 cut(s) 144, 384, 429, 503, 639, 824, 997, 2242
HpyF3I CTNAG 6 cut(s) 1019, 1548, 2441, 2583, 2699, 2817
HpySE526I ACGT 8 cut(s) 144, 384, 429, 503, 639, 824, 997, 2242
Hsp92I GRCGYC 3 cut(s) 282, 503, 639
KasI GGCGCC 1 cut(s) 281
Kpn2I TCCGGA 1 cut(s) 40
KpnI GGTACC 1 cut(s) 86
Ksp22I TGATCA 3 cut(s) 166, 1702, 2200
LguI GCTCTTC 1 cut(s) 70
LweI GCATC 4 cut(s) 168, 1321, 1853, 2143
MaeI CTAG 7 cut(s) 1463, 1710, 1863, 1868, 1970, 2028, 2325
MaeII ACGT 8 cut(s) 144, 384, 429, 503, 639, 824, 997, 2242
MaeIII GTNAC 9 cut(s) 337, 853, 1014, 1946, 2017, 2088, 2281, 2308, 2671
MflI RGATCY 5 cut(s) 1213, 1511, 1636, 1966, 2464
MhlI GDGCHC 6 cut(s) 65, 398, 1278, 1305, 2619, 2887
MlsI TGGCCA 2 cut(s) 785, 2414
MluNI TGGCCA 2 cut(s) 785, 2414
Mly113I GGCGCC 1 cut(s) 282
MlyI GAGTC 4 cut(s) 641, 1073, 2337, 2855
MmeI TCCRAC 1 cut(s) 1588
Mox20I TGGCCA 2 cut(s) 785, 2414
MroI TCCGGA 1 cut(s) 40
MscI TGGCCA 2 cut(s) 785, 2414
MseI TTAA 5 cut(s) 1029, 1419, 2177, 2469, 2832
MslI CAYNNNNRTG 3 cut(s) 1181, 2256, 2584
Msp20I TGGCCA 2 cut(s) 785, 2414
MspA1I CMGCKG 5 cut(s) 129, 221, 279, 313, 488
MspR9I CCNGG 6 cut(s) 589, 604, 1476, 1650, 1670, 2533
Mva1269I GAATGC 1 cut(s) 1141
MvaI CCWGG 3 cut(s) 1650, 1670, 2533
MvnI CGCG 4 cut(s) 447, 2106, 2223, 2610
NarI GGCGCC 1 cut(s) 282
NciI CCSGG 3 cut(s) 589, 604, 1476
NcoI CCATGG 1 cut(s) 1486
NlaIV GGNNCC 5 cut(s) 84, 283, 492, 1473, 2595
NmeAIII GCCGAG 1 cut(s) 585
NmuCI GTSAC 6 cut(s) 337, 1014, 1946, 2017, 2308, 2671
NruI TCGCGA 1 cut(s) 447
NsbI TGCGCA 2 cut(s) 2396, 2709
NspI RCATGY 1 cut(s) 1225
OliI CACNNNNGTG 1 cut(s) 2584
PaeR7I CTCGAG 1 cut(s) 113
PaqCI CACCTGC 1 cut(s) 538
PciSI GCTCTTC 1 cut(s) 70
PcsI WCGNNNNNNNCGW 6 cut(s) 413, 435, 444, 522, 656, 659
PctI GAATGC 1 cut(s) 1141
PfeI GAWTC 5 cut(s) 56, 952, 1496, 2038, 2792
PflMI CCANNNNNTGG 1 cut(s) 2363
PfoI TCCNGGA 1 cut(s) 602
PleI GAGTC 4 cut(s) 641, 1073, 2337, 2854
PluTI GGCGCC 1 cut(s) 285
PmaCI CACGTG 1 cut(s) 385
PmlI CACGTG 1 cut(s) 385
PpsI GAGTC 4 cut(s) 641, 1073, 2337, 2854
Ppu21I YACGTR 2 cut(s) 385, 430
PpuMI RGGWCCY 1 cut(s) 1672
PsiI TTATAA 1 cut(s) 1604
Psp5II RGGWCCY 1 cut(s) 1672
Psp6I CCWGG 3 cut(s) 1648, 1668, 2531
PspCI CACGTG 1 cut(s) 385
PspEI GGTNACC 1 cut(s) 853
PspFI CCCAGC 3 cut(s) 377, 2755, 2799
PspGI CCWGG 3 cut(s) 1648, 1668, 2531
PspN4I GGNNCC 5 cut(s) 84, 283, 492, 1473, 2595
PspPI GGNCC 3 cut(s) 750, 1490, 1672
PspPPI RGGWCCY 1 cut(s) 1672
PstI CTGCAG 2 cut(s) 1310, 2880
PstNI CAGNNNCTG 2 cut(s) 1675, 2363
PsuI RGATCY 5 cut(s) 1213, 1511, 1636, 1966, 2464
PvuII CAGCTG 2 cut(s) 221, 313
RruI TCGCGA 1 cut(s) 447
RsaI GTAC 6 cut(s) 84, 271, 432, 1192, 1890, 2033
RsaNI GTAC 6 cut(s) 83, 270, 431, 1191, 1889, 2032
RseI CAYNNNNRTG 3 cut(s) 1181, 2256, 2584
SalI GTCGAC 1 cut(s) 515
SapI GCTCTTC 1 cut(s) 70
SaqAI TTAA 5 cut(s) 1029, 1419, 2177, 2469, 2832
Sau96I GGNCC 3 cut(s) 750, 1490, 1672
SchI GAGTC 4 cut(s) 641, 1073, 2337, 2855
ScrFI CCNGG 6 cut(s) 589, 604, 1476, 1650, 1670, 2533
SduI GDGCHC 6 cut(s) 65, 398, 1278, 1305, 2619, 2887
SfaNI GCATC 4 cut(s) 168, 1321, 1853, 2143
SfcI CTRYAG 4 cut(s) 1306, 1654, 2641, 2876
SfoI GGCGCC 1 cut(s) 283
Sfr274I CTCGAG 1 cut(s) 113
SinI GGWCC 2 cut(s) 750, 1672
SlaI CTCGAG 1 cut(s) 113
SmiMI CAYNNNNRTG 3 cut(s) 1181, 2256, 2584
SmlI CTYRAG 5 cut(s) 113, 568, 801, 1088, 2069
SmoI CTYRAG 5 cut(s) 113, 568, 801, 1088, 2069
SspDI GGCGCC 1 cut(s) 281
SspI AATATT 1 cut(s) 940
SspMI CTAG 7 cut(s) 1463, 1710, 1863, 1868, 1970, 2028, 2325
StyD4I CCNGG 6 cut(s) 587, 602, 1474, 1648, 1668, 2531
StyI CCWWGG 7 cut(s) 753, 1140, 1486, 2027, 2324, 2415, 2687
TaaI ACNGT 7 cut(s) 78, 767, 1985, 2023, 2131, 2182, 2645
TaiI ACGT 8 cut(s) 147, 387, 432, 506, 642, 827, 1000, 2245
TaqI TCGA 8 cut(s) 54, 114, 474, 516, 1502, 2043, 2341, 2561
TatI WGTACW 1 cut(s) 1888
TauI GCSGC 6 cut(s) 51, 132, 249, 282, 2389, 2392
TfiI GAWTC 5 cut(s) 56, 952, 1496, 2038, 2792
Tru1I TTAA 5 cut(s) 1029, 1419, 2177, 2469, 2832
Tru9I TTAA 5 cut(s) 1029, 1419, 2177, 2469, 2832
TscAI CASTG 4 cut(s) 847, 1951, 2026, 2885
TseFI GTSAC 6 cut(s) 337, 1014, 1946, 2017, 2308, 2671
Tsp45I GTSAC 6 cut(s) 337, 1014, 1946, 2017, 2308, 2671
TspDTI ATGAA 6 cut(s) 92, 153, 965, 2252, 2260, 2542
TspGWI ACGGA 1 cut(s) 945
TspRI CASTG 4 cut(s) 847, 1951, 2026, 2885
Van91I CCANNNNNTGG 1 cut(s) 2363
VpaK11BI GGWCC 2 cut(s) 750, 1672
XapI RAATTY 7 cut(s) 212, 1256, 1542, 1569, 1995, 2213, 2479
XbaI TCTAGA 1 cut(s) 1969
XceI RCATGY 1 cut(s) 1225
XhoI CTCGAG 1 cut(s) 113
XmaJI CCTAGG 2 cut(s) 2027, 2324
XmiI GTMKAC 3 cut(s) 516, 1000, 2640
XspI CTAG 7 cut(s) 1463, 1710, 1863, 1868, 1970, 2028, 2325
ZraI GACGTC 2 cut(s) 504, 640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.