Rh7BG416500

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0008785
Physical Location & Seq
Forward (+)
47018475 .. 47026818
8344 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG416500.1

Sequence Viewer

Length: 2901 bp
ATGCCTCACAGAACGACTTACTTCTTCCCGAGGCAATTTCCGGATCGCCGCTTCGATTCGTGCTCTTCTGCCAAACAGTTGGTACCGCAAGATAGTCATCTTCATCATCATCTCGAGAAACAGAGCAGCGGCAGCAATGAAAACGACGTCGTCAGCACCATCATTGATCACCACCAAAAGTCTAACAACAACAACCACAACAGCACCAAATTCACAGCTGTATCCGATCAGTATTTCACGGGCGGCCGAAACACCACCACCACAAGCAGTACCAGCAGCGGCGCCAGCACGCAATACACCAAGAAGCAACAGCGGGCTCCCATTTGCGACTGGTTCGTCACCGAGAAAAAGCACAACAACAACAAGCGGAGATCCAAACCCAGCCACGTGAGGAGCACGAGATCGTCGCTGCCGTCATTCTCCTGCCACGTACCCGACGAGGATCGCGAGCTCCTGCTCCCGCCGGAGGCCGTCGATGTGTCCTCGGCCGTGCCGGATACGACGTCGTTCAAGGTCGACCGGAGCGTTGACCGGAACTTTGACCGGCAGGTGTCGCTGCCGAGGCTCTCAAGCGGGAGTAGCTACGCCGGGAGCTTGTTCTCCGGGACGACGACGCTGGACGGGAACTTCTCCGGCGACGTCAAGGACTCGTCGGCGACGACGGGGCCGGTGGAGGAAGAGGAGGGGGAGGAGGAGGTGGTGGTGGGAGTGGGAGTGGAGGCGAGTAGGGATAGCTTGGCGCAGAGGTACAAGGAGAGTTACTATTTGCAGCTTGTATTGGCCAAGAGGATTAGCGCTCAAGCTACTCTTGGTAGTGAGACGTTGCTTTTGCGTAACACTGGCATTGAGGTTACCGATGTTGAGACGGTGTCGTATCGCCTCTGGGTTAGTGGCTGCTTGTCTTACAATGAGAAAATATCGGATGGTTTCTACAATATTTTGGGGATGAATCCGTATCTATGGGTGATGTGCAATGATGTGGAAGAAGGTAAACGTCTACCATCACTGATGTCACTTAGAGCAATTAAACCCGCAGAGACATCAATGGAGGTGGTTCTTGTTGACAAACATGGGGACTCTCGCCTCAAGGAACTTCAAGATAAGGCACAAGAACTTTATTGTGCTTCAGAGAATACCTTGGTGTTGGTGGAGAAACTTGGCAAGCTTGTCGCCATCTACATGGGGGGTACTTATCCTGTGGAGCAAGGAGATCTCCACATGCGCTGGAAAGTAGTTAGCAAGAGATTGAGGGAATTCCAAAAGTGTATTGTGCTCCCCATTGGCAGCCTATCAATGGGGCTATGCAGGCATCGTGCTATTCTCTTCAAGAAATTGGCAGACTACATAGGTTTACCTTGCCGGATAGCTCGTGGTTGCAAGTATTGTGTGGCAGATCATAGGTCTTCTTGTCTTGTTAAAATTGAAGACAGGCAGCTTGTGAGGGAATATGTGGTTGATCTAGTTGGGGAACCTGGAAATGTCCATGGCCCAGATTCCTCAATCAATGGATCTCTGTCTTCAATATCTTCACCATTTCAAATTTCTCAGCAAAAAGAGTTCCAACGAATTTATAGGGATAGTGGATTATGTTCCCAAATTATAAACTCAAAGCACACTCGTCCACCTCCTGAAGATCCTCTGTATCCAGGCTACAGAGAGGAAAGCCAGGTCCTGAAAGATAGTAGTTTGCTTCCAGTTGATCAAACTAGATTTGGGATGGAAGCTTCTGTAATGCCTTTGGACTTGAAAGCGAATGCAGAGCATTGCCTTCTCCAGACACCAATGCCACCTTGTGTACAAGGTGATATTTCTGAAGCTGTTGATGTGGGAGCTGCCATTGCATCATTAGAGGAATGTGCTAGACTAGGTGAAGAAAGTATTATTGTACAGCAAGCTTACCGGAAGGAGATTGTTGTGTCAAGATGTGGAGTAATATGTAGCAGTGACAAGTCCAGTCAATCAGATCTAGAGGAGGTTGACAGTAAGCTTGAGATTCAAAGCCGATTTTCTGCTGTCACTGTTCCTAGGTACTTGAATCTCGAACCATCTCTTGCTATGGACTGGCTTGAGATCGCATGGGATGAGTTACATATCAAAGAGCGCGTTGGTGCTGGCTCATTTGGAACTGTGCATCGTGCTGAATGGCATGGATCGGATGTAGCTGTCAAGGTTTTAACTGTTCAAGATTTCCATGATGATCAGTTGAGGGAATTTTTGCGCGAGGTTGCAATTATGAAACGTGTCCGCCATCCCAATGTAGTTCTGTTCATGGGTGCAGTTACAAAGCGTCCACATCTCTCAATAGTGACAGAGTATTTACCTAGGGGTAGTCTATATCGACTCATACACAGGCCAGCTTCTGGGGAACTTCTGGATCATAGGCGGCGGCTGCGCATGGCATTAGATGTGGCCAAGGGGATCAATTACCTCCATTGTCTTAGCCCTCCTATTGTCCATTGGGATCTTAAATCTCCAAATTTGTTGGTTGATAAAAATTGGACAGCAAAGGTATGCGATTTTGGGTTGTCCAGGTTCAAAGCAAACACTTTCATATCATCGAAATCTGTTGCTGGAACACCTGAGTGGATGGCTCCAGAGTTCCTTCGCGGAGAGCCCTCAAATGAGAAGTCTGATGTCTACAGTTTCGGAGTAATCCTTTGGGAACTTGTGACCATGCAACAACCTTGGAGTGGGCTTAGTCCTGCGCAGGTAGTTGGCGCTGTTGCTTTCCAGAATAGAAGGCTTGCTATCCCAGCAAATACTCCCCCAATGTTGGCTTCTCTTATGGAATCCTGCTGGGCTGATGACCCTGCTCAGCGCCCAACATTTAAAAGTATAGTGGAGTCGCTGAAGAAGTTGCTAAAATCTCCTCTGCAGTGGGCACAGGTGAGTGGAACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EDR1 Pkinase_Tyr

Protein Analysis

966

Amino Acids

108.01

Weight (kDa)

6.75

Isoelectric Point (pI)

48.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDR1_CTR1_ARMC3_pept PF14381 287 - 494 1.4e-75 EDR1/CTR1/ARMC3, peptidase-like
PK_Tyr_Ser-Thr PF07714 696 - 950 1.5e-65 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 697 - 948 5.6e-52 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1601
AarI CACCTGC 1 cut(s) 538
AasI GACNNNNNNGTC 1 cut(s) 335
AatII GACGTC 3 cut(s) 150, 506, 642
Acc16I TGCGCA 2 cut(s) 2393, 2706
Acc36I ACCTGC 2 cut(s) 538, 2698
Acc65I GGTACC 1 cut(s) 82
AccB1I GGYRCC 2 cut(s) 82, 281
AccB7I CCANNNNNTGG 1 cut(s) 2360
AccI GTMKAC 3 cut(s) 516, 997, 2637
AccII CGCG 4 cut(s) 447, 2103, 2220, 2607
AccIII TCCGGA 1 cut(s) 40
AclWI GGATC 9 cut(s) 51, 366, 450, 1516, 1628, 2158, 2382, 2426, 2469
AcoI YGGCCR 4 cut(s) 244, 486, 780, 2409
AcsI RAATTY 6 cut(s) 209, 1253, 1539, 1566, 2210, 2476
AcuI CTGAAG 4 cut(s) 1110, 1650, 1833, 2870
AcvI CACGTG 1 cut(s) 388
AcyI GRCGYC 4 cut(s) 147, 282, 503, 639
AdeI CACNNNGTG 1 cut(s) 1793
AfaI GTAC 8 cut(s) 84, 271, 432, 749, 1189, 1797, 1887, 2030
AfeI AGCGCT 1 cut(s) 796
AfiI CCNNNNNNNGG 5 cut(s) 466, 1294, 2360, 2690, 2773
AflIII ACRYGT 1 cut(s) 2239
AjnI CCWGG 4 cut(s) 1471, 1645, 1665, 2528
AjuI GAANNNNNNNTTGG 2 cut(s) 2761, 2793
AleI CACNNNNGTG 1 cut(s) 2581
Alw21I GWGCWC 4 cut(s) 65, 398, 453, 1275
Alw26I GTCTC 3 cut(s) 812, 857, 1031
AlwI GGATC 9 cut(s) 51, 366, 450, 1516, 1628, 2158, 2382, 2426, 2469
AlwNI CAGNNNCTG 2 cut(s) 1672, 2360
Ama87I CYCGRG 2 cut(s) 28, 113
Aor13HI TCCGGA 1 cut(s) 40
Aor51HI AGCGCT 1 cut(s) 796
AoxI GGCC 8 cut(s) 244, 468, 486, 665, 780, 1486, 2351, 2409
ApoI RAATTY 6 cut(s) 209, 1253, 1539, 1566, 2210, 2476
ArsI GACNNNNNNTTYG 6 cut(s) 521, 553, 811, 843, 2612, 2644
Asp718I GGTACC 1 cut(s) 82
AspA2I CCTAGG 2 cut(s) 2024, 2321
AspS9I GGNCC 3 cut(s) 665, 1487, 1669
AsuC2I CCSGG 2 cut(s) 589, 604
AsuHPI GGTGA 7 cut(s) 161, 331, 976, 1521, 1814, 1880, 2899
AvaI CYCGRG 2 cut(s) 28, 113
AvaII GGWCC 1 cut(s) 1669
AvrII CCTAGG 2 cut(s) 2024, 2321
BaeGI GKGCMC 1 cut(s) 2884
BaeI ACNNNNGTAYC 2 cut(s) 204, 237
BalI TGGCCA 2 cut(s) 782, 2411
BanI GGYRCC 2 cut(s) 82, 281
BanII GRGCYC 3 cut(s) 319, 453, 2616
BauI CACGAG 2 cut(s) 397, 1368
BbrPI CACGTG 1 cut(s) 388
BbsI GAAGAC 3 cut(s) 1395, 1431, 1509
Bbv12I GWGCWC 4 cut(s) 65, 398, 453, 1275
BccI CCATC 8 cut(s) 167, 917, 1009, 1181, 1711, 2053, 2256, 2581
BceAI ACGGC 3 cut(s) 397, 455, 473
BcgI CGANNNNNNTGC 2 cut(s) 1150, 1184
BciT130I CCWGG 4 cut(s) 1473, 1647, 1667, 2530
BciVI GTATCC 3 cut(s) 232, 490, 1653
BclI TGATCA 3 cut(s) 166, 1699, 2197
BcnI CCSGG 2 cut(s) 589, 604
BcoDI GTCTC 3 cut(s) 812, 857, 1031
BfaI CTAG 7 cut(s) 1460, 1707, 1860, 1865, 1967, 2025, 2322
BfmI CTRYAG 3 cut(s) 1651, 2638, 2873
BfoI RGCGCY 4 cut(s) 285, 798, 2721, 2821
BfuAI ACCTGC 2 cut(s) 538, 2698
BfuI GTATCC 3 cut(s) 232, 490, 1653
BglII AGATCT 2 cut(s) 1210, 1963
BlnI CCTAGG 2 cut(s) 2024, 2321
BlpI GCTNAGC 1 cut(s) 2814
Bme1390I CCNGG 6 cut(s) 589, 604, 1473, 1647, 1667, 2530
Bme18I GGWCC 1 cut(s) 1669
BmeT110I CYCGRG 2 cut(s) 28, 113
BmgT120I GGNCC 3 cut(s) 665, 1487, 1669
BmiI GGNNCC 6 cut(s) 84, 283, 318, 666, 1470, 2592
BmrFI CCNGG 6 cut(s) 589, 604, 1473, 1647, 1667, 2530
BmsI GCATC 3 cut(s) 1318, 1850, 2140
BpiI GAAGAC 3 cut(s) 1395, 1431, 1509
BpmI CTGGAG 2 cut(s) 1757, 2577
Bpu1102I GCTNAGC 1 cut(s) 2814
BpuEI CTTGAG 5 cut(s) 553, 783, 1070, 2009, 2087
BpuMI CCSGG 2 cut(s) 589, 604
BsaAI YACGTR 2 cut(s) 388, 430
BsaBI GATNNNNATC 1 cut(s) 96
BsaHI GRCGYC 4 cut(s) 147, 282, 503, 639
BsaJI CCNNGG 9 cut(s) 29, 483, 560, 1137, 1483, 2024, 2321, 2412, 2684
BsaWI WCCGGW 4 cut(s) 40, 519, 531, 1899
BsaXI ACNNNNNCTCC 2 cut(s) 699, 729
Bsc4I CCNNNNNNNGG 5 cut(s) 466, 1294, 2360, 2690, 2773
Bse118I RCCGGY 2 cut(s) 543, 667
Bse1I ACTGG 5 cut(s) 335, 844, 1694, 1953, 2066
Bse3DI GCAATG 4 cut(s) 142, 979, 1762, 1836
Bse8I GATNNNNATC 1 cut(s) 96
BseAI TCCGGA 1 cut(s) 40
BseBI CCWGG 4 cut(s) 1473, 1647, 1667, 2530
BseDI CCNNGG 9 cut(s) 29, 483, 560, 1137, 1483, 2024, 2321, 2412, 2684
BseGI GGATG 7 cut(s) 928, 951, 1722, 2086, 2161, 2248, 2592
BseJI GATNNNNATC 1 cut(s) 96
BseLI CCNNNNNNNGG 5 cut(s) 466, 1294, 2360, 2690, 2773
BseMI GCAATG 4 cut(s) 142, 979, 1762, 1836
BseMII CTCAG 3 cut(s) 1559, 2571, 2828
BseNI ACTGG 5 cut(s) 335, 844, 1694, 1953, 2066
BseRI GAGGAG 6 cut(s) 406, 695, 704, 707, 1985, 2859
BseSI GKGCMC 1 cut(s) 2884
BseX3I CGGCCG 2 cut(s) 244, 486
BseYI CCCAGC 3 cut(s) 380, 2752, 2796
BsgI GTGCAG 1 cut(s) 2295
Bsh1236I CGCG 4 cut(s) 447, 2103, 2220, 2607
Bsh1285I CGRYCG 3 cut(s) 247, 489, 520
BshFI GGCC 8 cut(s) 246, 470, 488, 667, 782, 1488, 2353, 2411
BshNI GGYRCC 2 cut(s) 82, 281
BsiEI CGRYCG 3 cut(s) 247, 489, 520
BsiHKAI GWGCWC 4 cut(s) 65, 398, 453, 1275
BsiHKCI CYCGRG 2 cut(s) 28, 113
BslFI GGGAC 2 cut(s) 619, 1088
BslI CCNNNNNNNGG 5 cut(s) 466, 1294, 2360, 2690, 2773
BsmAI GTCTC 3 cut(s) 812, 857, 1031
BsmBI CGTCTC 2 cut(s) 812, 857
BsmFI GGGAC 2 cut(s) 619, 1088
BsmI GAATGC 1 cut(s) 1759
BsnI GGCC 8 cut(s) 246, 470, 488, 667, 782, 1488, 2353, 2411
BsoBI CYCGRG 2 cut(s) 28, 113
Bsp1286I GDGCHC 7 cut(s) 65, 319, 398, 453, 1275, 2616, 2884
Bsp13I TCCGGA 1 cut(s) 40
Bsp1407I TGTACA 2 cut(s) 1795, 1885
Bsp1720I GCTNAGC 1 cut(s) 2814
Bsp19I CCATGG 1 cut(s) 1483
Bsp68I TCGCGA 1 cut(s) 447
BspANI GGCC 8 cut(s) 246, 470, 488, 667, 782, 1488, 2353, 2411
BspCNI CTCAG 3 cut(s) 1558, 2572, 2827
BspEI TCCGGA 1 cut(s) 40
BspFNI CGCG 4 cut(s) 447, 2103, 2220, 2607
BspLI GGNNCC 6 cut(s) 84, 283, 318, 666, 1470, 2592
BspMAI CTGCAG 1 cut(s) 2877
BspMI ACCTGC 2 cut(s) 538, 2698
BspPI GGATC 9 cut(s) 51, 366, 450, 1516, 1628, 2158, 2382, 2426, 2469
BspQI GCTCTTC 1 cut(s) 70
BspT107I GGYRCC 2 cut(s) 82, 281
BsrDI GCAATG 4 cut(s) 142, 979, 1762, 1836
BsrFI RCCGGY 2 cut(s) 543, 667
BsrGI TGTACA 2 cut(s) 1795, 1885
BsrI ACTGG 5 cut(s) 335, 844, 1694, 1953, 2066
BssAI RCCGGY 2 cut(s) 543, 667
BssECI CCNNGG 9 cut(s) 29, 483, 560, 1137, 1483, 2024, 2321, 2412, 2684
BssNI GRCGYC 4 cut(s) 147, 282, 503, 639
BssSI CACGAG 2 cut(s) 397, 1368
BssT1I CCWWGG 6 cut(s) 1137, 1483, 2024, 2321, 2412, 2684
Bst2BI CACGAG 2 cut(s) 397, 1368
Bst2UI CCWGG 4 cut(s) 1473, 1647, 1667, 2530
Bst4CI ACNGT 7 cut(s) 78, 868, 1982, 2020, 2128, 2179, 2642
Bst6I CTCTTC 3 cut(s) 70, 672, 1328
BstACI GRCGYC 4 cut(s) 147, 282, 503, 639
BstAUI TGTACA 2 cut(s) 1795, 1885
BstBAI YACGTR 2 cut(s) 388, 430
BstDEI CTNAG 6 cut(s) 1016, 1545, 2438, 2580, 2696, 2814
BstDSI CCRYGG 1 cut(s) 1483
BstEII GGTNACC 1 cut(s) 850
BstF5I GGATG 7 cut(s) 928, 951, 1722, 2086, 2161, 2248, 2592
BstFNI CGCG 4 cut(s) 447, 2103, 2220, 2607
BstH2I RGCGCY 4 cut(s) 285, 798, 2721, 2821
BstMAI GTCTC 3 cut(s) 812, 857, 1031
BstMCI CGRYCG 3 cut(s) 247, 489, 520
BstNI CCWGG 4 cut(s) 1473, 1647, 1667, 2530
BstNSI RCATGY 1 cut(s) 1222
BstPI GGTNACC 1 cut(s) 850
BstSCI CCNGG 6 cut(s) 587, 602, 1471, 1645, 1665, 2528
BstSFI CTRYAG 3 cut(s) 1651, 2638, 2873
BstSLI GKGCMC 1 cut(s) 2884
BstUI CGCG 4 cut(s) 447, 2103, 2220, 2607
BstV2I GAAGAC 3 cut(s) 1395, 1431, 1509
BstX2I RGATCY 6 cut(s) 371, 1210, 1508, 1633, 1963, 2461
BstXI CCANNNNNNTGG 2 cut(s) 79, 1180
BstYI RGATCY 6 cut(s) 371, 1210, 1508, 1633, 1963, 2461
BstZI CGGCCG 2 cut(s) 244, 486
BsuI GTATCC 3 cut(s) 232, 490, 1653
BsuRI GGCC 8 cut(s) 246, 470, 488, 667, 782, 1488, 2353, 2411
BtgI CCRYGG 1 cut(s) 1483
BtsCI GGATG 7 cut(s) 928, 951, 1722, 2086, 2161, 2248, 2592
BtsI GCAGTG 2 cut(s) 1948, 2882
BtsIMutI CAGTG 5 cut(s) 837, 1004, 1948, 2016, 2882
BtuMI TCGCGA 1 cut(s) 447
BveI ACCTGC 2 cut(s) 538, 2698
CaiI CAGNNNCTG 2 cut(s) 1672, 2360
Cfr10I RCCGGY 2 cut(s) 543, 667
Cfr13I GGNCC 3 cut(s) 665, 1487, 1669
CseI GACGC 2 cut(s) 622, 2276
Csp6I GTAC 8 cut(s) 83, 270, 431, 748, 1188, 1796, 1886, 2029
CspCI CAANNNNNGTGG 2 cut(s) 1032, 1067
CviQI GTAC 8 cut(s) 83, 270, 431, 748, 1188, 1796, 1886, 2029
DdeI CTNAG 6 cut(s) 1016, 1545, 2438, 2580, 2696, 2814
DinI GGCGCC 1 cut(s) 283
DraI TTTAAA 1 cut(s) 2830
DraIII CACNNNGTG 1 cut(s) 1793
DrdI GACNNNNNNGTC 1 cut(s) 335
DseDI GACNNNNNNGTC 1 cut(s) 335
EaeI YGGCCR 4 cut(s) 244, 486, 780, 2409
EagI CGGCCG 2 cut(s) 244, 486
Eam1104I CTCTTC 3 cut(s) 70, 672, 1328
EarI CTCTTC 3 cut(s) 70, 672, 1328
EciI GGCGGA 1 cut(s) 2234
Ecl136II GAGCTC 1 cut(s) 451
EclXI CGGCCG 2 cut(s) 244, 486
Eco130I CCWWGG 6 cut(s) 1137, 1483, 2024, 2321, 2412, 2684
Eco24I GRGCYC 3 cut(s) 319, 453, 2616
Eco47I GGWCC 1 cut(s) 1669
Eco47III AGCGCT 1 cut(s) 796
Eco52I CGGCCG 2 cut(s) 244, 486
Eco53kI GAGCTC 1 cut(s) 451
Eco57I CTGAAG 4 cut(s) 1110, 1650, 1833, 2870
Eco72I CACGTG 1 cut(s) 388
Eco88I CYCGRG 2 cut(s) 28, 113
Eco91I GGTNACC 1 cut(s) 850
EcoICRI GAGCTC 1 cut(s) 451
EcoO109I RGGNCCY 1 cut(s) 1669
EcoO65I GGTNACC 1 cut(s) 850
EcoRI GAATTC 1 cut(s) 1253
EcoRII CCWGG 4 cut(s) 1471, 1645, 1665, 2528
EcoT14I CCWWGG 6 cut(s) 1137, 1483, 2024, 2321, 2412, 2684
EcoT38I GRGCYC 3 cut(s) 319, 453, 2616
EgeI GGCGCC 1 cut(s) 283
EheI GGCGCC 1 cut(s) 283
ErhI CCWWGG 6 cut(s) 1137, 1483, 2024, 2321, 2412, 2684
Esp3I CGTCTC 2 cut(s) 812, 857
FalI AAGNNNNNCTT 2 cut(s) 792, 824
FaqI GGGAC 2 cut(s) 619, 1088
FauI CCCGC 4 cut(s) 306, 468, 566, 1039
FbaI TGATCA 3 cut(s) 166, 1699, 2197
FblI GTMKAC 3 cut(s) 516, 997, 2637
FokI GGATG 7 cut(s) 935, 958, 1729, 2093, 2168, 2235, 2599
FriOI GRGCYC 3 cut(s) 319, 453, 2616
FspBI CTAG 7 cut(s) 1460, 1707, 1860, 1865, 1967, 2025, 2322
FspI TGCGCA 2 cut(s) 2393, 2706
GsaI CCCAGC 3 cut(s) 384, 2756, 2800
GsuI CTGGAG 2 cut(s) 1757, 2577
HaeII RGCGCY 4 cut(s) 285, 798, 2721, 2821
HaeIII GGCC 8 cut(s) 246, 470, 488, 667, 782, 1488, 2353, 2411
HgaI GACGC 2 cut(s) 622, 2276
Hin1I GRCGYC 4 cut(s) 147, 282, 503, 639
HincII GTYRAC 4 cut(s) 517, 529, 1063, 1978
HindII GTYRAC 4 cut(s) 517, 529, 1063, 1978
HindIII AAGCTT 4 cut(s) 1163, 1722, 1893, 1985
HphI GGTGA 7 cut(s) 161, 331, 976, 1521, 1814, 1880, 2899
Hpy188I TCNGA 8 cut(s) 226, 922, 1129, 1813, 1963, 2155, 2632, 2648
HpyAV CCTTC 5 cut(s) 980, 1778, 1897, 2612, 2733
HpyCH4III ACNGT 7 cut(s) 78, 868, 1982, 2020, 2128, 2179, 2642
HpyCH4IV ACGT 8 cut(s) 147, 387, 429, 503, 639, 821, 994, 2239
HpyF3I CTNAG 6 cut(s) 1016, 1545, 2438, 2580, 2696, 2814
HpySE526I ACGT 8 cut(s) 147, 387, 429, 503, 639, 821, 994, 2239
Hsp92I GRCGYC 4 cut(s) 147, 282, 503, 639
KasI GGCGCC 1 cut(s) 281
Kpn2I TCCGGA 1 cut(s) 40
KpnI GGTACC 1 cut(s) 86
Ksp22I TGATCA 3 cut(s) 166, 1699, 2197
LguI GCTCTTC 1 cut(s) 70
LweI GCATC 3 cut(s) 1318, 1850, 2140
MaeI CTAG 7 cut(s) 1460, 1707, 1860, 1865, 1967, 2025, 2322
MaeII ACGT 8 cut(s) 147, 387, 429, 503, 639, 821, 994, 2239
MflI RGATCY 6 cut(s) 371, 1210, 1508, 1633, 1963, 2461
MhlI GDGCHC 7 cut(s) 65, 319, 398, 453, 1275, 2616, 2884
MlsI TGGCCA 2 cut(s) 782, 2411
MluNI TGGCCA 2 cut(s) 782, 2411
Mly113I GGCGCC 1 cut(s) 282
MlyI GAGTC 4 cut(s) 641, 1070, 2334, 2852
MmeI TCCRAC 1 cut(s) 1585
Mox20I TGGCCA 2 cut(s) 782, 2411
MroI TCCGGA 1 cut(s) 40
MscI TGGCCA 2 cut(s) 782, 2411
MseI TTAA 5 cut(s) 1026, 1416, 2174, 2466, 2829
MslI CAYNNNNRTG 3 cut(s) 1178, 2253, 2581
Msp20I TGGCCA 2 cut(s) 782, 2411
MspA1I CMGCKG 4 cut(s) 129, 218, 279, 313
MspR9I CCNGG 6 cut(s) 589, 604, 1473, 1647, 1667, 2530
Mva1269I GAATGC 1 cut(s) 1759
MvaI CCWGG 4 cut(s) 1473, 1647, 1667, 2530
MvnI CGCG 4 cut(s) 447, 2103, 2220, 2607
NarI GGCGCC 1 cut(s) 282
NciI CCSGG 2 cut(s) 589, 604
NcoI CCATGG 1 cut(s) 1483
NlaIV GGNNCC 6 cut(s) 84, 283, 318, 666, 1470, 2592
NmeAIII GCCGAG 2 cut(s) 464, 585
NmuCI GTSAC 6 cut(s) 337, 1011, 1943, 2014, 2305, 2668
NruI TCGCGA 1 cut(s) 447
NsbI TGCGCA 2 cut(s) 2393, 2706
NspI RCATGY 1 cut(s) 1222
OliI CACNNNNGTG 1 cut(s) 2581
PaeR7I CTCGAG 1 cut(s) 113
PaqCI CACCTGC 1 cut(s) 538
PciSI GCTCTTC 1 cut(s) 70
PcsI WCGNNNNNNNCGW 5 cut(s) 410, 435, 444, 522, 656
PctI GAATGC 1 cut(s) 1759
PfeI GAWTC 6 cut(s) 56, 949, 1493, 1993, 2035, 2789
PflFI GACNNNGTC 2 cut(s) 149, 868
PflMI CCANNNNNTGG 1 cut(s) 2360
PfoI TCCNGGA 1 cut(s) 602
PleI GAGTC 4 cut(s) 641, 1070, 2334, 2851
PluTI GGCGCC 1 cut(s) 285
PmaCI CACGTG 1 cut(s) 388
PmlI CACGTG 1 cut(s) 388
PpsI GAGTC 4 cut(s) 641, 1070, 2334, 2851
Ppu21I YACGTR 2 cut(s) 388, 430
PpuMI RGGWCCY 1 cut(s) 1669
PsiI TTATAA 1 cut(s) 1601
Psp124BI GAGCTC 1 cut(s) 453
Psp5II RGGWCCY 1 cut(s) 1669
Psp6I CCWGG 4 cut(s) 1471, 1645, 1665, 2528
PspCI CACGTG 1 cut(s) 388
PspEI GGTNACC 1 cut(s) 850
PspFI CCCAGC 3 cut(s) 380, 2752, 2796
PspGI CCWGG 4 cut(s) 1471, 1645, 1665, 2528
PspN4I GGNNCC 6 cut(s) 84, 283, 318, 666, 1470, 2592
PspPI GGNCC 3 cut(s) 665, 1487, 1669
PspPPI RGGWCCY 1 cut(s) 1669
PstI CTGCAG 1 cut(s) 2877
PstNI CAGNNNCTG 2 cut(s) 1672, 2360
PsuI RGATCY 6 cut(s) 371, 1210, 1508, 1633, 1963, 2461
PsyI GACNNNGTC 2 cut(s) 149, 868
PvuII CAGCTG 1 cut(s) 218
RruI TCGCGA 1 cut(s) 447
RsaI GTAC 8 cut(s) 84, 271, 432, 749, 1189, 1797, 1887, 2030
RsaNI GTAC 8 cut(s) 83, 270, 431, 748, 1188, 1796, 1886, 2029
RseI CAYNNNNRTG 3 cut(s) 1178, 2253, 2581
SacI GAGCTC 1 cut(s) 453
SalI GTCGAC 1 cut(s) 515
SapI GCTCTTC 1 cut(s) 70
SaqAI TTAA 5 cut(s) 1026, 1416, 2174, 2466, 2829
Sau96I GGNCC 3 cut(s) 665, 1487, 1669
SchI GAGTC 4 cut(s) 641, 1070, 2334, 2852
ScrFI CCNGG 6 cut(s) 589, 604, 1473, 1647, 1667, 2530
SduI GDGCHC 7 cut(s) 65, 319, 398, 453, 1275, 2616, 2884
SfaNI GCATC 3 cut(s) 1318, 1850, 2140
SfcI CTRYAG 3 cut(s) 1651, 2638, 2873
SfoI GGCGCC 1 cut(s) 283
Sfr274I CTCGAG 1 cut(s) 113
SinI GGWCC 1 cut(s) 1669
SlaI CTCGAG 1 cut(s) 113
SmiMI CAYNNNNRTG 3 cut(s) 1178, 2253, 2581
SmlI CTYRAG 6 cut(s) 113, 568, 798, 1085, 1988, 2066
SmoI CTYRAG 6 cut(s) 113, 568, 798, 1085, 1988, 2066
SspDI GGCGCC 1 cut(s) 281
SspI AATATT 1 cut(s) 937
SspMI CTAG 7 cut(s) 1460, 1707, 1860, 1865, 1967, 2025, 2322
SstI GAGCTC 1 cut(s) 453
StyD4I CCNGG 6 cut(s) 587, 602, 1471, 1645, 1665, 2528
StyI CCWWGG 6 cut(s) 1137, 1483, 2024, 2321, 2412, 2684
TaaI ACNGT 7 cut(s) 78, 868, 1982, 2020, 2128, 2179, 2642
TaiI ACGT 8 cut(s) 150, 390, 432, 506, 642, 824, 997, 2242
TaqI TCGA 7 cut(s) 54, 114, 474, 516, 2040, 2338, 2558
TatI WGTACW 2 cut(s) 1795, 1885
TauI GCSGC 6 cut(s) 51, 132, 246, 282, 2386, 2389
TfiI GAWTC 6 cut(s) 56, 949, 1493, 1993, 2035, 2789
Tru1I TTAA 5 cut(s) 1026, 1416, 2174, 2466, 2829
Tru9I TTAA 5 cut(s) 1026, 1416, 2174, 2466, 2829
TscAI CASTG 5 cut(s) 844, 1011, 1948, 2023, 2882
TseFI GTSAC 6 cut(s) 337, 1011, 1943, 2014, 2305, 2668
Tsp45I GTSAC 6 cut(s) 337, 1011, 1943, 2014, 2305, 2668
TspDTI ATGAA 6 cut(s) 92, 153, 962, 2249, 2257, 2539
TspGWI ACGGA 1 cut(s) 942
TspRI CASTG 5 cut(s) 844, 1011, 1948, 2023, 2882
Tth111I GACNNNGTC 2 cut(s) 149, 868
Van91I CCANNNNNTGG 1 cut(s) 2360
VpaK11BI GGWCC 1 cut(s) 1669
XapI RAATTY 6 cut(s) 209, 1253, 1539, 1566, 2210, 2476
XbaI TCTAGA 1 cut(s) 1966
XceI RCATGY 1 cut(s) 1222
XhoI CTCGAG 1 cut(s) 113
XmaJI CCTAGG 2 cut(s) 2024, 2321
XmiI GTMKAC 3 cut(s) 516, 997, 2637
XspI CTAG 7 cut(s) 1460, 1707, 1860, 1865, 1967, 2025, 2322
ZraI GACGTC 3 cut(s) 148, 504, 640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.