Hydroxyproline-rich glycoprotein family protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G26750 |
| fragaria_vesca | FvH4_5g39180 FvH4_5g39180 |
| malus_domestica | MD00G1179000.v1.1 MD03G1294800.v1.1 |
| prunus_persica | Prupe.8G266900_v2.0.a1 |
| pyrus_communis | pycom03g23320 pycom11g27410 |
| rosa_chinensis | RchiOBHm_Chr7g0241441 |
| rosa_laevigata | RLG00000000581 |
| rosa_multiflora | Rmu_co8080026.1_g000001 Rmu_co8368331.1_g000001 Rmu_sc0015905.1_g000004 Rmu_sc0030862.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00219140 |
| rosa_rugosa | Rorug07G0343900 Rorug07G0343900 |
| rosa_samantha | Rh7AG498500 Rh7BG469100 Rh7CG515400 Rh7DG483200 |
| rosa_wichuraiana | Rw7G042100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 991 |
| Acc36I | ACCTGC | 2 cut(s) | 51, 991 |
| AccB1I | GGYRCC | 1 cut(s) | 1253 |
| AciI | CCGC | 8 cut(s) | 131, 507, 684, 770, 806, 821, 827, 971 |
| AclWI | GGATC | 4 cut(s) | 291, 461, 572, 1064 |
| AcoI | YGGCCR | 1 cut(s) | 1248 |
| AcsI | RAATTY | 2 cut(s) | 348, 859 |
| AcuI | CTGAAG | 1 cut(s) | 645 |
| AdeI | CACNNNGTG | 1 cut(s) | 257 |
| AfaI | GTAC | 2 cut(s) | 372, 1097 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 461, 506, 746, 1250 |
| AgsI | TTSAA | 2 cut(s) | 124, 347 |
| AjnI | CCWGG | 4 cut(s) | 23, 460, 650, 1120 |
| AluBI | AGCT | 7 cut(s) | 61, 574, 891, 1002, 1088, 1113, 1175 |
| AluI | AGCT | 7 cut(s) | 61, 574, 891, 1002, 1088, 1113, 1175 |
| Alw26I | GTCTC | 2 cut(s) | 177, 1198 |
| AlwI | GGATC | 4 cut(s) | 291, 461, 572, 1064 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1127 |
| AoxI | GGCC | 2 cut(s) | 1124, 1248 |
| ApeKI | GCWGC | 7 cut(s) | 61, 329, 404, 416, 903, 1110, 1154 |
| ApoI | RAATTY | 2 cut(s) | 348, 859 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 142, 174 |
| AseI | ATTAAT | 1 cut(s) | 180 |
| AspS9I | GGNCC | 4 cut(s) | 365, 509, 749, 1124 |
| AsuHPI | GGTGA | 1 cut(s) | 476 |
| AvaII | GGWCC | 3 cut(s) | 365, 509, 749 |
| BaeGI | GKGCMC | 1 cut(s) | 311 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1030, 1063 |
| BanI | GGYRCC | 1 cut(s) | 1253 |
| BanII | GRGCYC | 1 cut(s) | 31 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1085, 1117 |
| BbsI | GAAGAC | 1 cut(s) | 702 |
| BbvI | GCAGC | 7 cut(s) | 48, 316, 391, 403, 915, 1122, 1141 |
| BccI | CCATC | 6 cut(s) | 503, 508, 621, 760, 919, 1252 |
| BciT130I | CCWGG | 4 cut(s) | 25, 462, 652, 1122 |
| BclI | TGATCA | 1 cut(s) | 526 |
| BcoDI | GTCTC | 2 cut(s) | 177, 1198 |
| BfaI | CTAG | 4 cut(s) | 513, 888, 1067, 1158 |
| BfmI | CTRYAG | 2 cut(s) | 62, 1203 |
| BfuAI | ACCTGC | 2 cut(s) | 51, 991 |
| BisI | GCNGC | 8 cut(s) | 62, 330, 405, 417, 821, 904, 1111, 1155 |
| BlsI | GCNGC | 8 cut(s) | 63, 331, 406, 418, 822, 905, 1112, 1156 |
| Bme1390I | CCNGG | 4 cut(s) | 25, 462, 652, 1122 |
| Bme18I | GGWCC | 3 cut(s) | 365, 509, 749 |
| BmgT120I | GGNCC | 4 cut(s) | 365, 509, 749, 1124 |
| BmiI | GGNNCC | 3 cut(s) | 367, 520, 1255 |
| BmrFI | CCNGG | 4 cut(s) | 25, 462, 652, 1122 |
| BmsI | GCATC | 2 cut(s) | 345, 781 |
| BpiI | GAAGAC | 1 cut(s) | 702 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1072, 1104 |
| BpmI | CTGGAG | 2 cut(s) | 444, 589 |
| Bpu10I | CCTNAGC | 1 cut(s) | 267 |
| BpuEI | CTTGAG | 3 cut(s) | 1133, 1199, 1247 |
| BsaJI | CCNNGG | 3 cut(s) | 24, 650, 1121 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 461, 506, 746, 1250 |
| Bse118I | RCCGGY | 2 cut(s) | 1250, 1256 |
| Bse1I | ACTGG | 1 cut(s) | 358 |
| Bse3DI | GCAATG | 1 cut(s) | 114 |
| BseBI | CCWGG | 4 cut(s) | 25, 462, 652, 1122 |
| BseDI | CCNNGG | 3 cut(s) | 24, 650, 1121 |
| BseGI | GGATG | 4 cut(s) | 481, 495, 772, 911 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 461, 506, 746, 1250 |
| BseMI | GCAATG | 1 cut(s) | 114 |
| BseMII | CTCAG | 3 cut(s) | 344, 1103, 1119 |
| BseNI | ACTGG | 1 cut(s) | 358 |
| BseRI | GAGGAG | 4 cut(s) | 997, 1005, 1008, 1011 |
| BseSI | GKGCMC | 1 cut(s) | 311 |
| BseX3I | CGGCCG | 1 cut(s) | 1248 |
| BseXI | GCAGC | 7 cut(s) | 48, 316, 391, 403, 915, 1122, 1141 |
| BsgI | GTGCAG | 3 cut(s) | 309, 963, 1059 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1251 |
| BshFI | GGCC | 2 cut(s) | 1126, 1250 |
| BshNI | GGYRCC | 1 cut(s) | 1253 |
| BsiEI | CGRYCG | 1 cut(s) | 1251 |
| BsiSI | CCGG | 2 cut(s) | 1251, 1257 |
| BslFI | GGGAC | 3 cut(s) | 202, 351, 677 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 461, 506, 746, 1250 |
| BsmAI | GTCTC | 2 cut(s) | 177, 1198 |
| BsmFI | GGGAC | 3 cut(s) | 202, 351, 677 |
| BsnI | GGCC | 2 cut(s) | 1126, 1250 |
| Bsp1286I | GDGCHC | 2 cut(s) | 31, 311 |
| Bsp143I | GATC | 6 cut(s) | 283, 466, 526, 577, 727, 1069 |
| BspACI | CCGC | 8 cut(s) | 131, 507, 684, 770, 806, 821, 827, 971 |
| BspANI | GGCC | 2 cut(s) | 1126, 1250 |
| BspCNI | CTCAG | 3 cut(s) | 345, 1102, 1120 |
| BspHI | TCATGA | 1 cut(s) | 844 |
| BspLI | GGNNCC | 3 cut(s) | 367, 520, 1255 |
| BspMAI | CTGCAG | 1 cut(s) | 66 |
| BspMI | ACCTGC | 2 cut(s) | 51, 991 |
| BspPI | GGATC | 4 cut(s) | 291, 461, 572, 1064 |
| BspQI | GCTCTTC | 2 cut(s) | 36, 289 |
| BspT107I | GGYRCC | 1 cut(s) | 1253 |
| BsrDI | GCAATG | 1 cut(s) | 114 |
| BsrFI | RCCGGY | 2 cut(s) | 1250, 1256 |
| BsrI | ACTGG | 1 cut(s) | 358 |
| BssAI | RCCGGY | 2 cut(s) | 1250, 1256 |
| BssECI | CCNNGG | 3 cut(s) | 24, 650, 1121 |
| BssMI | GATC | 6 cut(s) | 283, 466, 526, 577, 727, 1069 |
| Bst2UI | CCWGG | 4 cut(s) | 25, 462, 652, 1122 |
| Bst4CI | ACNGT | 4 cut(s) | 95, 533, 708, 782 |
| Bst6I | CTCTTC | 2 cut(s) | 36, 289 |
| BstC8I | GCNNGC | 1 cut(s) | 334 |
| BstDEI | CTNAG | 6 cut(s) | 147, 254, 267, 353, 1089, 1128 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 744 |
| BstF5I | GGATG | 4 cut(s) | 481, 495, 772, 911 |
| BstKTI | GATC | 6 cut(s) | 286, 469, 529, 580, 730, 1072 |
| BstMAI | GTCTC | 2 cut(s) | 177, 1198 |
| BstMBI | GATC | 6 cut(s) | 283, 466, 526, 577, 727, 1069 |
| BstMCI | CGRYCG | 1 cut(s) | 1251 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 43, 67, 296, 413, 826, 1151, 1163, 1172 |
| BstNI | CCWGG | 4 cut(s) | 25, 462, 652, 1122 |
| BstNSI | RCATGY | 2 cut(s) | 239, 820 |
| BstSCI | CCNGG | 4 cut(s) | 23, 460, 650, 1120 |
| BstSFI | CTRYAG | 2 cut(s) | 62, 1203 |
| BstSLI | GKGCMC | 1 cut(s) | 311 |
| BstV1I | GCAGC | 7 cut(s) | 48, 316, 391, 403, 915, 1122, 1141 |
| BstV2I | GAAGAC | 1 cut(s) | 702 |
| BstX2I | RGATCY | 1 cut(s) | 1069 |
| BstYI | RGATCY | 1 cut(s) | 1069 |
| BstZI | CGGCCG | 1 cut(s) | 1248 |
| BsuRI | GGCC | 2 cut(s) | 1126, 1250 |
| BtsCI | GGATG | 4 cut(s) | 481, 495, 772, 911 |
| BtsI | GCAGTG | 1 cut(s) | 309 |
| BtsIMutI | CAGTG | 3 cut(s) | 309, 538, 1261 |
| BveI | ACCTGC | 2 cut(s) | 51, 991 |
| Cac8I | GCNNGC | 1 cut(s) | 334 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1127 |
| CciI | TCATGA | 1 cut(s) | 844 |
| Cfr10I | RCCGGY | 2 cut(s) | 1250, 1256 |
| Cfr13I | GGNCC | 4 cut(s) | 365, 509, 749, 1124 |
| Csp6I | GTAC | 2 cut(s) | 371, 1096 |
| CviAII | CATG | 6 cut(s) | 71, 169, 236, 587, 817, 845 |
| CviQI | GTAC | 2 cut(s) | 371, 1096 |
| DdeI | CTNAG | 6 cut(s) | 147, 254, 267, 353, 1089, 1128 |
| DpnI | GATC | 6 cut(s) | 285, 468, 528, 579, 729, 1071 |
| DpnII | GATC | 6 cut(s) | 283, 466, 526, 577, 727, 1069 |
| DraIII | CACNNNGTG | 1 cut(s) | 257 |
| EaeI | YGGCCR | 1 cut(s) | 1248 |
| EagI | CGGCCG | 1 cut(s) | 1248 |
| Eam1104I | CTCTTC | 2 cut(s) | 36, 289 |
| EarI | CTCTTC | 2 cut(s) | 36, 289 |
| EclXI | CGGCCG | 1 cut(s) | 1248 |
| Eco24I | GRGCYC | 1 cut(s) | 31 |
| Eco47I | GGWCC | 3 cut(s) | 365, 509, 749 |
| Eco52I | CGGCCG | 1 cut(s) | 1248 |
| Eco57I | CTGAAG | 1 cut(s) | 645 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 744 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1124 |
| EcoRII | CCWGG | 4 cut(s) | 23, 460, 650, 1120 |
| EcoT22I | ATGCAT | 1 cut(s) | 237 |
| EcoT38I | GRGCYC | 1 cut(s) | 31 |
| FaeI | CATG | 6 cut(s) | 74, 172, 239, 590, 820, 848 |
| FaqI | GGGAC | 3 cut(s) | 202, 351, 677 |
| FatI | CATG | 6 cut(s) | 70, 168, 235, 586, 816, 844 |
| FauI | CCCGC | 3 cut(s) | 691, 777, 813 |
| FbaI | TGATCA | 1 cut(s) | 526 |
| Fnu4HI | GCNGC | 8 cut(s) | 62, 330, 405, 417, 821, 904, 1111, 1155 |
| FokI | GGATG | 4 cut(s) | 482, 488, 759, 898 |
| FriOI | GRGCYC | 1 cut(s) | 31 |
| Fsp4HI | GCNGC | 8 cut(s) | 62, 330, 405, 417, 821, 904, 1111, 1155 |
| FspBI | CTAG | 4 cut(s) | 513, 888, 1067, 1158 |
| GluI | GCNGC | 8 cut(s) | 62, 330, 405, 417, 821, 904, 1111, 1155 |
| GsuI | CTGGAG | 2 cut(s) | 444, 589 |
| HaeIII | GGCC | 2 cut(s) | 1126, 1250 |
| HapII | CCGG | 2 cut(s) | 1251, 1257 |
| Hin1II | CATG | 6 cut(s) | 74, 172, 239, 590, 820, 848 |
| HindIII | AAGCTT | 1 cut(s) | 1000 |
| HinfI | GANTC | 7 cut(s) | 127, 163, 211, 590, 602, 758, 1161 |
| HpaII | CCGG | 2 cut(s) | 1251, 1257 |
| HphI | GGTGA | 1 cut(s) | 476 |
| Hpy188I | TCNGA | 4 cut(s) | 354, 669, 757, 1092 |
| Hpy188III | TCNNGA | 4 cut(s) | 377, 845, 1195, 1216 |
| HpyAV | CCTTC | 8 cut(s) | 406, 437, 441, 729, 861, 942, 999, 1126 |
| HpyCH4III | ACNGT | 4 cut(s) | 95, 533, 708, 782 |
| HpyCH4IV | ACGT | 1 cut(s) | 49 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 43, 67, 296, 413, 826, 1151, 1163, 1172 |
| HpyF3I | CTNAG | 6 cut(s) | 147, 254, 267, 353, 1089, 1128 |
| HpySE526I | ACGT | 1 cut(s) | 49 |
| Hsp92II | CATG | 6 cut(s) | 74, 172, 239, 590, 820, 848 |
| Ksp22I | TGATCA | 1 cut(s) | 526 |
| Kzo9I | GATC | 6 cut(s) | 283, 466, 526, 577, 727, 1069 |
| LguI | GCTCTTC | 2 cut(s) | 36, 289 |
| LmnI | GCTCC | 5 cut(s) | 524, 991, 1018, 1063, 1172 |
| Lsp1109I | GCAGC | 7 cut(s) | 48, 316, 391, 403, 915, 1122, 1141 |
| LweI | GCATC | 2 cut(s) | 345, 781 |
| MaeI | CTAG | 4 cut(s) | 513, 888, 1067, 1158 |
| MaeII | ACGT | 1 cut(s) | 49 |
| MaeIII | GTNAC | 2 cut(s) | 1221, 1259 |
| MalI | GATC | 6 cut(s) | 285, 468, 528, 579, 729, 1071 |
| MboI | GATC | 6 cut(s) | 283, 466, 526, 577, 727, 1069 |
| MboII | GAAGA | 8 cut(s) | 23, 136, 306, 331, 702, 725, 957, 984 |
| MflI | RGATCY | 1 cut(s) | 1069 |
| MhlI | GDGCHC | 2 cut(s) | 31, 311 |
| MluCI | AATT | 5 cut(s) | 157, 348, 617, 859, 871 |
| MlyI | GAGTC | 4 cut(s) | 205, 584, 596, 752 |
| MmeI | TCCRAC | 2 cut(s) | 692, 747 |
| Mph1103I | ATGCAT | 1 cut(s) | 237 |
| MseI | TTAA | 2 cut(s) | 180, 438 |
| MslI | CAYNNNNRTG | 1 cut(s) | 399 |
| MspI | CCGG | 2 cut(s) | 1251, 1257 |
| MspR9I | CCNGG | 4 cut(s) | 25, 462, 652, 1122 |
| MvaI | CCWGG | 4 cut(s) | 25, 462, 652, 1122 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 43, 67, 296, 413, 826, 1151, 1163, 1172 |
| NdeII | GATC | 6 cut(s) | 283, 466, 526, 577, 727, 1069 |
| NlaIII | CATG | 6 cut(s) | 74, 172, 239, 590, 820, 848 |
| NlaIV | GGNNCC | 3 cut(s) | 367, 520, 1255 |
| NmuCI | GTSAC | 2 cut(s) | 1221, 1259 |
| NsiI | ATGCAT | 1 cut(s) | 237 |
| NspI | RCATGY | 2 cut(s) | 239, 820 |
| PagI | TCATGA | 1 cut(s) | 844 |
| PaqCI | CACCTGC | 1 cut(s) | 991 |
| PciSI | GCTCTTC | 2 cut(s) | 36, 289 |
| PfeI | GAWTC | 3 cut(s) | 127, 163, 1161 |
| PflFI | GACNNNGTC | 1 cut(s) | 214 |
| PkrI | GCNGC | 8 cut(s) | 63, 331, 406, 418, 822, 905, 1112, 1156 |
| PleI | GAGTC | 4 cut(s) | 205, 584, 596, 752 |
| PpsI | GAGTC | 4 cut(s) | 205, 584, 596, 752 |
| PshBI | ATTAAT | 1 cut(s) | 180 |
| Psp6I | CCWGG | 4 cut(s) | 23, 460, 650, 1120 |
| PspGI | CCWGG | 4 cut(s) | 23, 460, 650, 1120 |
| PspN4I | GGNNCC | 3 cut(s) | 367, 520, 1255 |
| PspPI | GGNCC | 4 cut(s) | 365, 509, 749, 1124 |
| PstI | CTGCAG | 1 cut(s) | 66 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1127 |
| PsuI | RGATCY | 1 cut(s) | 1069 |
| PsyI | GACNNNGTC | 1 cut(s) | 214 |
| RsaI | GTAC | 2 cut(s) | 372, 1097 |
| RsaNI | GTAC | 2 cut(s) | 371, 1096 |
| RseI | CAYNNNNRTG | 1 cut(s) | 399 |
| SapI | GCTCTTC | 2 cut(s) | 36, 289 |
| SaqAI | TTAA | 2 cut(s) | 180, 438 |
| SatI | GCNGC | 8 cut(s) | 62, 330, 405, 417, 821, 904, 1111, 1155 |
| Sau3AI | GATC | 6 cut(s) | 283, 466, 526, 577, 727, 1069 |
| Sau96I | GGNCC | 4 cut(s) | 365, 509, 749, 1124 |
| SchI | GAGTC | 4 cut(s) | 205, 584, 596, 752 |
| ScrFI | CCNGG | 4 cut(s) | 25, 462, 652, 1122 |
| SduI | GDGCHC | 2 cut(s) | 31, 311 |
| SfaNI | GCATC | 2 cut(s) | 345, 781 |
| SfcI | CTRYAG | 2 cut(s) | 62, 1203 |
| SinI | GGWCC | 3 cut(s) | 365, 509, 749 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 399 |
| SmlI | CTYRAG | 3 cut(s) | 1148, 1214, 1226 |
| SmoI | CTYRAG | 3 cut(s) | 1148, 1214, 1226 |
| Sse9I | AATT | 5 cut(s) | 157, 348, 617, 859, 871 |
| SsiI | CCGC | 8 cut(s) | 131, 507, 684, 770, 806, 821, 827, 971 |
| SspI | AATATT | 1 cut(s) | 1054 |
| SspMI | CTAG | 4 cut(s) | 513, 888, 1067, 1158 |
| StyD4I | CCNGG | 4 cut(s) | 23, 460, 650, 1120 |
| TaaI | ACNGT | 4 cut(s) | 95, 533, 708, 782 |
| TaiI | ACGT | 1 cut(s) | 52 |
| TaqI | TCGA | 5 cut(s) | 5, 161, 189, 593, 1196 |
| TasI | AATT | 5 cut(s) | 157, 348, 617, 859, 871 |
| TauI | GCSGC | 1 cut(s) | 823 |
| TfiI | GAWTC | 3 cut(s) | 127, 163, 1161 |
| Tru1I | TTAA | 2 cut(s) | 180, 438 |
| Tru9I | TTAA | 2 cut(s) | 180, 438 |
| TscAI | CASTG | 2 cut(s) | 316, 538 |
| TseFI | GTSAC | 2 cut(s) | 1221, 1259 |
| TseI | GCWGC | 7 cut(s) | 61, 329, 404, 416, 903, 1110, 1154 |
| Tsp45I | GTSAC | 2 cut(s) | 1221, 1259 |
| TspDTI | ATGAA | 2 cut(s) | 87, 1203 |
| TspRI | CASTG | 2 cut(s) | 316, 538 |
| Tth111I | GACNNNGTC | 1 cut(s) | 214 |
| VpaK11BI | GGWCC | 3 cut(s) | 365, 509, 749 |
| VspI | ATTAAT | 1 cut(s) | 180 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 744 |
| XapI | RAATTY | 2 cut(s) | 348, 859 |
| XceI | RCATGY | 2 cut(s) | 239, 820 |
| XspI | CTAG | 4 cut(s) | 513, 888, 1067, 1158 |
| Zsp2I | ATGCAT | 1 cut(s) | 237 |