Vacuolar protein sorting-associated protein VTA1 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G26750 |
| fragaria_vesca | FvH4_5g39180 FvH4_5g39180 |
| malus_domestica | MD00G1179000.v1.1 MD03G1294800.v1.1 |
| prunus_persica | Prupe.8G266900_v2.0.a1 |
| pyrus_communis | pycom03g23320 pycom11g27410 |
| rosa_chinensis | RchiOBHm_Chr7g0241441 |
| rosa_laevigata | RLG00000000581 |
| rosa_multiflora | Rmu_co8080026.1_g000001 Rmu_co8368331.1_g000001 Rmu_sc0015905.1_g000004 Rmu_sc0030862.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00219140 |
| rosa_rugosa | Rorug07G0343900 Rorug07G0343900 |
| rosa_samantha | Rh7AG498500 Rh7BG469100 Rh7CG515400 Rh7DG483200 |
| rosa_wichuraiana | Rw7G042100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1144 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 503, 1319 |
| AccII | CGCG | 1 cut(s) | 51 |
| AciI | CCGC | 4 cut(s) | 461, 629, 632, 776 |
| AclWI | GGATC | 3 cut(s) | 121, 566, 568 |
| AcoI | YGGCCR | 1 cut(s) | 748 |
| AcsI | RAATTY | 2 cut(s) | 157, 692 |
| AcuI | CTGAAG | 3 cut(s) | 230, 243, 698 |
| AfaI | GTAC | 4 cut(s) | 41, 145, 236, 1166 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 461, 473, 503, 800, 1319 |
| AgsI | TTSAA | 7 cut(s) | 124, 191, 439, 641, 965, 1089, 1298 |
| AjiI | CACGTC | 1 cut(s) | 1261 |
| AjnI | CCWGG | 1 cut(s) | 556 |
| AluBI | AGCT | 6 cut(s) | 28, 187, 407, 1064, 1182, 1319 |
| AluI | AGCT | 6 cut(s) | 28, 187, 407, 1064, 1182, 1319 |
| Alw26I | GTCTC | 1 cut(s) | 1009 |
| AlwI | GGATC | 3 cut(s) | 121, 566, 568 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1136 |
| AoxI | GGCC | 3 cut(s) | 218, 463, 748 |
| ApaI | GGGCCC | 1 cut(s) | 467 |
| ApeKI | GCWGC | 9 cut(s) | 28, 184, 329, 404, 416, 542, 607, 1179, 1223 |
| ApoI | RAATTY | 2 cut(s) | 157, 692 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1126 |
| AspLEI | GCGC | 3 cut(s) | 51, 53, 772 |
| AspS9I | GGNCC | 4 cut(s) | 218, 463, 464, 530 |
| AsuHPI | GGTGA | 3 cut(s) | 488, 711, 1185 |
| AvaII | GGWCC | 1 cut(s) | 530 |
| BaeGI | GKGCMC | 1 cut(s) | 467 |
| BalI | TGGCCA | 1 cut(s) | 750 |
| BanII | GRGCYC | 2 cut(s) | 467, 1037 |
| BauI | CACGAG | 1 cut(s) | 71 |
| BbsI | GAAGAC | 1 cut(s) | 231 |
| BbvI | GCAGC | 9 cut(s) | 15, 196, 316, 416, 428, 529, 619, 1191, 1210 |
| BccI | CCATC | 3 cut(s) | 505, 1198, 1321 |
| BceAI | ACGGC | 1 cut(s) | 22 |
| BciT130I | CCWGG | 1 cut(s) | 558 |
| BcoDI | GTCTC | 1 cut(s) | 1009 |
| BfaI | CTAG | 1 cut(s) | 708 |
| BfmI | CTRYAG | 1 cut(s) | 543 |
| BfuAI | ACCTGC | 1 cut(s) | 1144 |
| Bme1390I | CCNGG | 1 cut(s) | 558 |
| Bme18I | GGWCC | 1 cut(s) | 530 |
| BmgBI | CACGTC | 1 cut(s) | 1261 |
| BmgT120I | GGNCC | 4 cut(s) | 218, 463, 464, 530 |
| BmiI | GGNNCC | 3 cut(s) | 219, 465, 466 |
| BmrFI | CCNGG | 1 cut(s) | 558 |
| BmrI | ACTGGG | 1 cut(s) | 577 |
| BmsI | GCATC | 3 cut(s) | 529, 658, 676 |
| BmuI | ACTGGG | 1 cut(s) | 577 |
| BpiI | GAAGAC | 1 cut(s) | 231 |
| BpmI | CTGGAG | 1 cut(s) | 29 |
| BpuEI | CTTGAG | 3 cut(s) | 260, 404, 441 |
| BsaBI | GATNNNNATC | 4 cut(s) | 483, 565, 648, 822 |
| BsaJI | CCNNGG | 1 cut(s) | 1209 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 104, 134 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 461, 473, 503, 800, 1319 |
| Bse118I | RCCGGY | 1 cut(s) | 19 |
| Bse1I | ACTGG | 4 cut(s) | 552, 583, 1168, 1265 |
| Bse3DI | GCAATG | 2 cut(s) | 114, 660 |
| Bse8I | GATNNNNATC | 4 cut(s) | 483, 565, 648, 822 |
| BseBI | CCWGG | 1 cut(s) | 558 |
| BseDI | CCNNGG | 1 cut(s) | 1209 |
| BseGI | GGATG | 3 cut(s) | 649, 823, 1007 |
| BseJI | GATNNNNATC | 4 cut(s) | 483, 565, 648, 822 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 461, 473, 503, 800, 1319 |
| BseMI | GCAATG | 2 cut(s) | 114, 660 |
| BseMII | CTCAG | 4 cut(s) | 663, 797, 881, 1188 |
| BseNI | ACTGG | 4 cut(s) | 552, 583, 1168, 1265 |
| BsePI | GCGCGC | 1 cut(s) | 49 |
| BseRI | GAGGAG | 6 cut(s) | 155, 822, 921, 1056, 1131, 1134 |
| BseSI | GKGCMC | 1 cut(s) | 467 |
| BseXI | GCAGC | 9 cut(s) | 15, 196, 316, 416, 428, 529, 619, 1191, 1210 |
| BsgI | GTGCAG | 1 cut(s) | 609 |
| Bsh1236I | CGCG | 1 cut(s) | 51 |
| BshFI | GGCC | 3 cut(s) | 220, 465, 750 |
| BsiSI | CCGG | 1 cut(s) | 20 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 461, 473, 503, 800, 1319 |
| BsmAI | GTCTC | 1 cut(s) | 1009 |
| BsmI | GAATGC | 2 cut(s) | 610, 754 |
| BsnI | GGCC | 3 cut(s) | 220, 465, 750 |
| Bsp120I | GGGCCC | 1 cut(s) | 463 |
| Bsp1286I | GDGCHC | 2 cut(s) | 467, 1037 |
| Bsp143I | GATC | 9 cut(s) | 126, 283, 379, 484, 523, 560, 571, 643, 1276 |
| BspACI | CCGC | 4 cut(s) | 461, 629, 632, 776 |
| BspANI | GGCC | 3 cut(s) | 220, 465, 750 |
| BspCNI | CTCAG | 4 cut(s) | 664, 796, 880, 1189 |
| BspFNI | CGCG | 1 cut(s) | 51 |
| BspHI | TCATGA | 2 cut(s) | 177, 934 |
| BspLI | GGNNCC | 3 cut(s) | 219, 465, 466 |
| BspMAI | CTGCAG | 1 cut(s) | 547 |
| BspMI | ACCTGC | 1 cut(s) | 1144 |
| BspPI | GGATC | 3 cut(s) | 121, 566, 568 |
| BsrDI | GCAATG | 2 cut(s) | 114, 660 |
| BsrFI | RCCGGY | 1 cut(s) | 19 |
| BsrI | ACTGG | 4 cut(s) | 552, 583, 1168, 1265 |
| BssAI | RCCGGY | 1 cut(s) | 19 |
| BssECI | CCNNGG | 1 cut(s) | 1209 |
| BssHII | GCGCGC | 1 cut(s) | 49 |
| BssMI | GATC | 9 cut(s) | 126, 283, 379, 484, 523, 560, 571, 643, 1276 |
| BssSI | CACGAG | 1 cut(s) | 71 |
| Bst2BI | CACGAG | 1 cut(s) | 71 |
| Bst2UI | CCWGG | 1 cut(s) | 558 |
| Bst4CI | ACNGT | 2 cut(s) | 95, 1126 |
| Bst6I | CTCTTC | 1 cut(s) | 814 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 767, 1232 |
| BstC8I | GCNNGC | 7 cut(s) | 7, 21, 51, 140, 334, 463, 752 |
| BstDEI | CTNAG | 5 cut(s) | 672, 726, 783, 867, 1197 |
| BstF5I | GGATG | 3 cut(s) | 649, 823, 1007 |
| BstFNI | CGCG | 1 cut(s) | 51 |
| BstHHI | GCGC | 3 cut(s) | 51, 53, 772 |
| BstKTI | GATC | 9 cut(s) | 129, 286, 382, 487, 526, 563, 574, 646, 1279 |
| BstMAI | GTCTC | 1 cut(s) | 1009 |
| BstMBI | GATC | 9 cut(s) | 126, 283, 379, 484, 523, 560, 571, 643, 1276 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 25, 34, 296, 413, 767, 1220, 1232, 1241 |
| BstNI | CCWGG | 1 cut(s) | 558 |
| BstSCI | CCNGG | 1 cut(s) | 556 |
| BstSFI | CTRYAG | 1 cut(s) | 543 |
| BstSLI | GKGCMC | 1 cut(s) | 467 |
| BstUI | CGCG | 1 cut(s) | 51 |
| BstV1I | GCAGC | 9 cut(s) | 15, 196, 316, 416, 428, 529, 619, 1191, 1210 |
| BstV2I | GAAGAC | 1 cut(s) | 231 |
| BstX2I | RGATCY | 1 cut(s) | 126 |
| BstYI | RGATCY | 1 cut(s) | 126 |
| BsuRI | GGCC | 3 cut(s) | 220, 465, 750 |
| BtgZI | GCGATG | 1 cut(s) | 552 |
| BtrI | CACGTC | 1 cut(s) | 1261 |
| BtsCI | GGATG | 3 cut(s) | 649, 823, 1007 |
| BtsIMutI | CAGTG | 1 cut(s) | 206 |
| BveI | ACCTGC | 1 cut(s) | 1144 |
| Cac8I | GCNNGC | 7 cut(s) | 7, 21, 51, 140, 334, 463, 752 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1136 |
| CciI | TCATGA | 2 cut(s) | 177, 934 |
| CfoI | GCGC | 3 cut(s) | 51, 53, 772 |
| Cfr10I | RCCGGY | 1 cut(s) | 19 |
| Cfr13I | GGNCC | 4 cut(s) | 218, 463, 464, 530 |
| Csp6I | GTAC | 4 cut(s) | 40, 144, 235, 1165 |
| CviAII | CATG | 4 cut(s) | 178, 734, 815, 935 |
| CviQI | GTAC | 4 cut(s) | 40, 144, 235, 1165 |
| DdeI | CTNAG | 5 cut(s) | 672, 726, 783, 867, 1197 |
| DpnI | GATC | 9 cut(s) | 128, 285, 381, 486, 525, 562, 573, 645, 1278 |
| DpnII | GATC | 9 cut(s) | 126, 283, 379, 484, 523, 560, 571, 643, 1276 |
| EaeI | YGGCCR | 1 cut(s) | 748 |
| Eam1104I | CTCTTC | 1 cut(s) | 814 |
| EarI | CTCTTC | 1 cut(s) | 814 |
| Eco24I | GRGCYC | 2 cut(s) | 467, 1037 |
| Eco47I | GGWCC | 1 cut(s) | 530 |
| Eco57I | CTGAAG | 3 cut(s) | 230, 243, 698 |
| EcoO109I | RGGNCCY | 2 cut(s) | 218, 464 |
| EcoRII | CCWGG | 1 cut(s) | 556 |
| EcoT38I | GRGCYC | 2 cut(s) | 467, 1037 |
| FaeI | CATG | 4 cut(s) | 181, 737, 818, 938 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 418, 450 |
| FatI | CATG | 4 cut(s) | 177, 733, 814, 934 |
| FauI | CCCGC | 1 cut(s) | 454 |
| FauNDI | CATATG | 1 cut(s) | 520 |
| FokI | GGATG | 3 cut(s) | 636, 810, 994 |
| FriOI | GRGCYC | 2 cut(s) | 467, 1037 |
| FspBI | CTAG | 1 cut(s) | 708 |
| GlaI | GCGC | 3 cut(s) | 50, 52, 771 |
| GsuI | CTGGAG | 1 cut(s) | 29 |
| HaeIII | GGCC | 3 cut(s) | 220, 465, 750 |
| HapII | CCGG | 1 cut(s) | 20 |
| HhaI | GCGC | 3 cut(s) | 51, 53, 772 |
| Hin1II | CATG | 4 cut(s) | 181, 737, 818, 938 |
| Hin6I | GCGC | 3 cut(s) | 49, 51, 770 |
| HinP1I | GCGC | 3 cut(s) | 49, 51, 770 |
| HincII | GTYRAC | 1 cut(s) | 1305 |
| HindII | GTYRAC | 1 cut(s) | 1305 |
| HinfI | GANTC | 2 cut(s) | 349, 938 |
| HpaII | CCGG | 1 cut(s) | 20 |
| HphI | GGTGA | 3 cut(s) | 488, 711, 1185 |
| Hpy166II | GTNNAC | 1 cut(s) | 1305 |
| Hpy188I | TCNGA | 7 cut(s) | 571, 673, 859, 1039, 1071, 1104, 1132 |
| Hpy188III | TCNNGA | 5 cut(s) | 178, 383, 641, 680, 935 |
| Hpy8I | GTNNAC | 1 cut(s) | 1305 |
| Hpy99I | CGWCG | 2 cut(s) | 59, 86 |
| HpyAV | CCTTC | 5 cut(s) | 424, 437, 678, 722, 1095 |
| HpyCH4III | ACNGT | 2 cut(s) | 95, 1126 |
| HpyCH4IV | ACGT | 3 cut(s) | 854, 1163, 1260 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 25, 34, 296, 413, 767, 1220, 1232, 1241 |
| HpyF3I | CTNAG | 5 cut(s) | 672, 726, 783, 867, 1197 |
| HpySE526I | ACGT | 3 cut(s) | 854, 1163, 1260 |
| Hsp92II | CATG | 4 cut(s) | 181, 737, 818, 938 |
| HspAI | GCGC | 3 cut(s) | 49, 51, 770 |
| KroI | GCCGGC | 1 cut(s) | 19 |
| KroNI | GCCGGC | 1 cut(s) | 21 |
| Kzo9I | GATC | 9 cut(s) | 126, 283, 379, 484, 523, 560, 571, 643, 1276 |
| LmnI | GCTCC | 4 cut(s) | 112, 1069, 1144, 1241 |
| Lsp1109I | GCAGC | 9 cut(s) | 15, 196, 316, 416, 428, 529, 619, 1191, 1210 |
| LweI | GCATC | 3 cut(s) | 529, 658, 676 |
| MaeI | CTAG | 1 cut(s) | 708 |
| MaeII | ACGT | 3 cut(s) | 854, 1163, 1260 |
| MaeIII | GTNAC | 4 cut(s) | 204, 547, 717, 803 |
| MalI | GATC | 9 cut(s) | 128, 285, 381, 486, 525, 562, 573, 645, 1278 |
| MboI | GATC | 9 cut(s) | 126, 283, 379, 484, 523, 560, 571, 643, 1276 |
| MboII | GAAGA | 4 cut(s) | 136, 236, 459, 801 |
| MflI | RGATCY | 1 cut(s) | 126 |
| MhlI | GDGCHC | 2 cut(s) | 467, 1037 |
| MlsI | TGGCCA | 1 cut(s) | 750 |
| MluCI | AATT | 7 cut(s) | 157, 359, 597, 692, 943, 958, 1203 |
| MluNI | TGGCCA | 1 cut(s) | 750 |
| MmeI | TCCRAC | 3 cut(s) | 860, 1094, 1219 |
| Mox20I | TGGCCA | 1 cut(s) | 750 |
| MroNI | GCCGGC | 1 cut(s) | 19 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1126 |
| MscI | TGGCCA | 1 cut(s) | 750 |
| MseI | TTAA | 3 cut(s) | 254, 354, 600 |
| Msp20I | TGGCCA | 1 cut(s) | 750 |
| MspA1I | CMGCKG | 1 cut(s) | 1319 |
| MspI | CCGG | 1 cut(s) | 20 |
| MspR9I | CCNGG | 1 cut(s) | 558 |
| Mva1269I | GAATGC | 2 cut(s) | 610, 754 |
| MvaI | CCWGG | 1 cut(s) | 558 |
| MvnI | CGCG | 1 cut(s) | 51 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 25, 34, 296, 413, 767, 1220, 1232, 1241 |
| NaeI | GCCGGC | 1 cut(s) | 21 |
| NdeI | CATATG | 1 cut(s) | 520 |
| NdeII | GATC | 9 cut(s) | 126, 283, 379, 484, 523, 560, 571, 643, 1276 |
| NgoMIV | GCCGGC | 1 cut(s) | 19 |
| NlaIII | CATG | 4 cut(s) | 181, 737, 818, 938 |
| NlaIV | GGNNCC | 3 cut(s) | 219, 465, 466 |
| NmeAIII | GCCGAG | 1 cut(s) | 1234 |
| NmuCI | GTSAC | 2 cut(s) | 204, 717 |
| PagI | TCATGA | 2 cut(s) | 177, 934 |
| PauI | GCGCGC | 1 cut(s) | 49 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 78, 292 |
| PctI | GAATGC | 2 cut(s) | 610, 754 |
| PdiI | GCCGGC | 1 cut(s) | 21 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1126 |
| PfeI | GAWTC | 2 cut(s) | 349, 938 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 503, 1319 |
| PfoI | TCCNGGA | 1 cut(s) | 556 |
| Psp6I | CCWGG | 1 cut(s) | 556 |
| PspGI | CCWGG | 1 cut(s) | 556 |
| PspN4I | GGNNCC | 3 cut(s) | 219, 465, 466 |
| PspOMI | GGGCCC | 1 cut(s) | 463 |
| PspPI | GGNCC | 4 cut(s) | 218, 463, 464, 530 |
| PstI | CTGCAG | 1 cut(s) | 547 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1136 |
| PsuI | RGATCY | 1 cut(s) | 126 |
| PteI | GCGCGC | 1 cut(s) | 49 |
| PvuII | CAGCTG | 1 cut(s) | 1319 |
| RsaI | GTAC | 4 cut(s) | 41, 145, 236, 1166 |
| RsaNI | GTAC | 4 cut(s) | 40, 144, 235, 1165 |
| SaqAI | TTAA | 3 cut(s) | 254, 354, 600 |
| Sau3AI | GATC | 9 cut(s) | 126, 283, 379, 484, 523, 560, 571, 643, 1276 |
| Sau96I | GGNCC | 4 cut(s) | 218, 463, 464, 530 |
| ScrFI | CCNGG | 1 cut(s) | 558 |
| SduI | GDGCHC | 2 cut(s) | 467, 1037 |
| SfaNI | GCATC | 3 cut(s) | 529, 658, 676 |
| SfcI | CTRYAG | 1 cut(s) | 543 |
| SinI | GGWCC | 1 cut(s) | 530 |
| SmlI | CTYRAG | 3 cut(s) | 239, 383, 456 |
| SmoI | CTYRAG | 3 cut(s) | 239, 383, 456 |
| Sse9I | AATT | 7 cut(s) | 157, 359, 597, 692, 943, 958, 1203 |
| SsiI | CCGC | 4 cut(s) | 461, 629, 632, 776 |
| SspI | AATATT | 1 cut(s) | 994 |
| SspMI | CTAG | 1 cut(s) | 708 |
| StyD4I | CCNGG | 1 cut(s) | 556 |
| TaaI | ACNGT | 2 cut(s) | 95, 1126 |
| TaiI | ACGT | 3 cut(s) | 857, 1166, 1263 |
| TaqI | TCGA | 2 cut(s) | 97, 295 |
| TasI | AATT | 7 cut(s) | 157, 359, 597, 692, 943, 958, 1203 |
| TauI | GCSGC | 1 cut(s) | 634 |
| TfiI | GAWTC | 2 cut(s) | 349, 938 |
| Tru1I | TTAA | 3 cut(s) | 254, 354, 600 |
| Tru9I | TTAA | 3 cut(s) | 254, 354, 600 |
| TscAI | CASTG | 1 cut(s) | 213 |
| TseFI | GTSAC | 2 cut(s) | 204, 717 |
| TseI | GCWGC | 9 cut(s) | 28, 184, 329, 404, 416, 542, 607, 1179, 1223 |
| Tsp45I | GTSAC | 2 cut(s) | 204, 717 |
| TspDTI | ATGAA | 6 cut(s) | 194, 507, 609, 753, 812, 951 |
| TspRI | CASTG | 1 cut(s) | 213 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 503, 1319 |
| VpaK11BI | GGWCC | 1 cut(s) | 530 |
| XapI | RAATTY | 2 cut(s) | 157, 692 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1126 |
| XspI | CTAG | 1 cut(s) | 708 |